CmoCh12G005440 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA ATGAGCACCAAAGCGCACAATCGGAGCAAATTTATGCGATTCGTTACTCTACCCATCAGAGCTCTTGGCAAGGCCAAGGATTTGTATGTACGAAGCATCATGGATTGTGCTCCGAGAGTTAGCCATGGCTACCCATCTGGCCAAATGCCCGTCTTGCCCAAGAGTTACAGCTCGCGATCCTGCAGATCCAATGAAACCGATGATTTCAGGGAGCTTGTTAAGGCCGCTTCTGTTAGGAGTATGGACATTAAAGATGTCGACGCCGATGTTGTTTATCCACAGAGGGTGAGACAGTCCACGGGGCTGCCTAAGAGTTGCAGCGTTGGAATGGGTAGGATTGATGAAGATAGTGCTTGCGAGTTTGAAGGTGGCGTGGAGGAGAAGGGGGATTTGGTTTATCCAAGGAGTAGAAGCTACGCTGTGACGAGTACAAAATCTGGGGCTTGA MSTKAHNRSKFMRFVTLPIRALGKAKDLYVRSIMDCAPRVSHGYPSGQMPVLPKSYSSRSCRSNETDDFRELVKAASVRSMDIKDVDADVVYPQRVRQSTGLPKSCSVGMGRIDEDSACEFEGGVEEKGDLVYPRSRSYAVTSTKSGA Homology
BLAST of CmoCh12G005440 vs. ExPASy TrEMBL
Match: A0A6J1GH58 (uncharacterized protein LOC111454153 OS=Cucurbita moschata OX=3662 GN=LOC111454153 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.4e-77 Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0
BLAST of CmoCh12G005440 vs. ExPASy TrEMBL
Match: A0A6J1KUQ7 (uncharacterized protein LOC111496579 OS=Cucurbita maxima OX=3661 GN=LOC111496579 PE=4 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 8.4e-76 Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0
BLAST of CmoCh12G005440 vs. ExPASy TrEMBL
Match: A0A1S3BAI0 (uncharacterized protein LOC103487823 OS=Cucumis melo OX=3656 GN=LOC103487823 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 6.0e-66 Identity = 123/144 (85.42%), Postives = 138/144 (95.83%), Query Frame = 0
BLAST of CmoCh12G005440 vs. ExPASy TrEMBL
Match: A0A0A0LN74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354110 PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 9.6e-64 Identity = 122/148 (82.43%), Postives = 137/148 (92.57%), Query Frame = 0
BLAST of CmoCh12G005440 vs. ExPASy TrEMBL
Match: A0A5A7UYI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00970 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 8.2e-63 Identity = 118/136 (86.76%), Postives = 131/136 (96.32%), Query Frame = 0
BLAST of CmoCh12G005440 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 105.5 bits (262), Expect = 3.7e-23 Identity = 66/162 (40.74%), Postives = 95/162 (58.64%), Query Frame = 0
BLAST of CmoCh12G005440 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 89.0 bits (219), Expect = 3.5e-18 Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 0
BLAST of CmoCh12G005440 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 2.4e-06 Identity = 42/144 (29.17%), Postives = 74/144 (51.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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