CmoCh12G005330 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G005330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein ZAT10-like
Location	Cmo_Chr12: 3253802 .. 3254488 (-)
RNA-Seq Expression	CmoCh12G005330
Synteny	CmoCh12G005330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCTCGAAGCTCTCAATTCCCCGACCATGGCCGCCCCCCCTCCCTTCGACAAGCCTCTCAAGCCCTGGGTCAAGCGCAAGCGTTCCCCCCGCCCATCTCTCGACGGCGCTCCCTCTGAAGAAGAGTATCTTGCTCTCTGTCTCATCATGCTTGCCCGCGGCGGCGCCTCTCCCTCTCCACCCAAGCCGGTGGCTGCCGTCAAGTCTGCTTATAACTGTCCCCTTTGCGATAAGGTCTTTTCCTCTTACCAAGCTCTCGGTGGCCACAAAACTAGCCACCGGAAACCGGCTTCTGTCGACGACCAGTCCACGTCGGTGTCCGGTGCCACGTCGAGTACCACCACGTCTACCTCTGGTGGAAGGGCTCATGTCTGTAATGTTTGTCATAAGTCGTTTCCCACTGGGCAGGCCTTGGGTGGACACAAGCGCCGCCACTACGAAGGCGGCTCTGCCGCCTTCGGGAATCGTCAGAGCTATAGTGGGATTACGATGACTTCGTCTGAAGGAGTGGGTTCGACACATACCGGCAGCCATAGCCATCGGAATTTCGACCTGAATATCCCCGCGTCAGCGGCTCTGTCGCCGAAGCTGTTGTTCGCCGGCGACCAGGAGGTGGAGAGCCCTCTGCCGACGAAGAAGCCGCGGTTGTTTTGGCTACCGGAACCGGAGAACTCGCTGAATTAG

mRNA sequence

ATGGCGCTCGAAGCTCTCAATTCCCCGACCATGGCCGCCCCCCCTCCCTTCGACAAGCCTCTCAAGCCCTGGGTCAAGCGCAAGCGTTCCCCCCGCCCATCTCTCGACGGCGCTCCCTCTGAAGAAGAGTATCTTGCTCTCTGTCTCATCATGCTTGCCCGCGGCGGCGCCTCTCCCTCTCCACCCAAGCCGGTGGCTGCCGTCAAGTCTGCTTATAACTGTCCCCTTTGCGATAAGGTCTTTTCCTCTTACCAAGCTCTCGGTGGCCACAAAACTAGCCACCGGAAACCGGCTTCTGTCGACGACCAGTCCACGTCGGTGTCCGGTGCCACGTCGAGTACCACCACGTCTACCTCTGGTGGAAGGGCTCATGTCTGTAATGTTTGTCATAAGTCGTTTCCCACTGGGCAGGCCTTGGGTGGACACAAGCGCCGCCACTACGAAGGCGGCTCTGCCGCCTTCGGGAATCGTCAGAGCTATAGTGGGATTACGATGACTTCGTCTGAAGGAGTGGGTTCGACACATACCGGCAGCCATAGCCATCGGAATTTCGACCTGAATATCCCCGCGTCAGCGGCTCTGTCGCCGAAGCTGTTGTTCGCCGGCGACCAGGAGGTGGAGAGCCCTCTGCCGACGAAGAAGCCGCGGTTGTTTTGGCTACCGGAACCGGAGAACTCGCTGAATTAG

Coding sequence (CDS)

ATGGCGCTCGAAGCTCTCAATTCCCCGACCATGGCCGCCCCCCCTCCCTTCGACAAGCCTCTCAAGCCCTGGGTCAAGCGCAAGCGTTCCCCCCGCCCATCTCTCGACGGCGCTCCCTCTGAAGAAGAGTATCTTGCTCTCTGTCTCATCATGCTTGCCCGCGGCGGCGCCTCTCCCTCTCCACCCAAGCCGGTGGCTGCCGTCAAGTCTGCTTATAACTGTCCCCTTTGCGATAAGGTCTTTTCCTCTTACCAAGCTCTCGGTGGCCACAAAACTAGCCACCGGAAACCGGCTTCTGTCGACGACCAGTCCACGTCGGTGTCCGGTGCCACGTCGAGTACCACCACGTCTACCTCTGGTGGAAGGGCTCATGTCTGTAATGTTTGTCATAAGTCGTTTCCCACTGGGCAGGCCTTGGGTGGACACAAGCGCCGCCACTACGAAGGCGGCTCTGCCGCCTTCGGGAATCGTCAGAGCTATAGTGGGATTACGATGACTTCGTCTGAAGGAGTGGGTTCGACACATACCGGCAGCCATAGCCATCGGAATTTCGACCTGAATATCCCCGCGTCAGCGGCTCTGTCGCCGAAGCTGTTGTTCGCCGGCGACCAGGAGGTGGAGAGCCCTCTGCCGACGAAGAAGCCGCGGTTGTTTTGGCTACCGGAACCGGAGAACTCGCTGAATTAG

Protein sequence

MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGGASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN

Homology

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BLAST of CmoCh12G005330 vs. ExPASy Swiss-Prot
Match: Q96289 (Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.5e-44
Identity = 114/232 (49.14%), Postives = 142/232 (61.21%), Query Frame = 0


Query: 1   MALEALNSPTMAAP-PPFDKP------LKPWVKRKRSPRPSLD---GAPSEEEYLALCLI 60
           MALEAL SP +A+P PP  +       ++ W K KRS R   D      +EEEYLA CL+
Sbjct: 1   MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLM 60

Query: 61  MLARGGASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASV------DDQS 120
           +LAR    P PP   A  K +Y C +CDK FSSYQALGGHK SHRK  S       DD S
Sbjct: 61  LLARDNRQPPPPP--AVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHS 120

Query: 121 TSVSGATSSTTTSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGIT 180
           T  S AT+++  +T  G++HVC +C+KSFP+GQALGGHKR HYEG +       + +  +
Sbjct: 121 T--SSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNN-------NINTSS 180

Query: 181 MTSSEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPR 217
           +++SEG GST   S SHR FDLNIP     S   +  GD EV SP+P KKPR
Sbjct: 181 VSNSEGAGSTSHVSSSHRGFDLNIPPIPEFS---MVNGDDEVMSPMPAKKPR 218

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BLAST of CmoCh12G005330 vs. ExPASy Swiss-Prot
Match: Q42430 (Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.3e-37
Identity = 104/225 (46.22%), Postives = 126/225 (56.00%), Query Frame = 0


Query: 21  LKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGG----ASPSPPKPVAAVKSAYNCPL 80
           L+ W KRKRS R       SEEE LALCL+ML+RGG     +P P    A V + + C +
Sbjct: 40  LQGWAKRKRSRRQR-----SEEENLALCLLMLSRGGKQRVQAPQPESFAAPVPAEFKCSV 99

Query: 81  CDKVFSSYQALGGHKTSHR--KPASVDDQST--------------SVSGATSSTTTSTSG 140
           C K FSSYQALGGHKTSHR  +P+   D +               S   ATSST  S+ G
Sbjct: 100 CGKSFSSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDG 159

Query: 141 --GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGS 200
              R H C++C K FPTGQALGGHKR+HY+GG  A  +           SE VGST  GS
Sbjct: 160 ATNRVHRCSICQKEFPTGQALGGHKRKHYDGGVGAAASSTELLAAAAAESE-VGSTGNGS 219

Query: 201 HSHRNFDLNIPA------SAALSPKLLFAGDQEVESPLPTKKPRL 218
            + R FDLNIPA            K+++  D+EV+SPL  KKPRL
Sbjct: 220 SAARAFDLNIPAVPEFVWRPCAKGKMMWEDDEEVQSPLAFKKPRL 258

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BLAST of CmoCh12G005330 vs. ExPASy Swiss-Prot
Match: O22533 (Zinc finger protein ZAT6 OS=Arabidopsis thaliana OX=3702 GN=ZAT6 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.3e-36
Identity = 112/246 (45.53%), Postives = 140/246 (56.91%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPF---DKPL---KPWVKRKRSPRPSLD-GAPSEEEYLALCLIMLA 60
           MALE L SP +++P P    D  L       KR +  R   D  + +E+EY+ALCL++LA
Sbjct: 1   MALETLTSPRLSSPMPTLFQDSALGFHGSKGKRSKRSRSEFDRQSLTEDEYIALCLMLLA 60

Query: 61  RGG----------ASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQ 120
           R G          +S SPP         Y C +CDK FSSYQALGGHK SHRK  S+   
Sbjct: 61  RDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQS 120

Query: 121 STSVSGATSS--TTTSTSGG-----RAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGN 180
           +     +TSS  TT+  SGG     ++HVC++CHKSF TGQALGGHKR HYEG +   G 
Sbjct: 121 AGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKNG--GG 180

Query: 181 RQSYSGITMTSSEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPR 223
             S    ++++SE VGST   S  HR FDLNIP     S   +  GD+EV SP+P KK R
Sbjct: 181 VSS----SVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFS---MVNGDEEVMSPMPAKKLR 236

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BLAST of CmoCh12G005330 vs. ExPASy Swiss-Prot
Match: Q9SSW0 (Zinc finger protein AZF3 OS=Arabidopsis thaliana OX=3702 GN=AZF3 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.7e-36
Identity = 103/223 (46.19%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPFDKPLKPWVK-RKRSPRPSLD----GAPSEEEYLALCLIMLARG 60
           MALEALNSP +   P     ++ W K +KRS R   D       +EEEYLA CL++LAR 
Sbjct: 1   MALEALNSPRLVEDPLRFNGVEQWTKCKKRSKRSRSDLHHNHRLTEEEYLAFCLMLLARD 60

Query: 61  GASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTT 120
           G          A K +Y C +C K FSSYQALGGHK SHR         +   G  +  +
Sbjct: 61  GGDLD--SVTVAEKPSYKCGVCYKTFSSYQALGGHKASHR---------SLYGGGENDKS 120

Query: 121 TSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGST- 180
           T ++  ++HVC+VC KSF TGQALGGHKR HY+GG              +++SEGVGST 
Sbjct: 121 TPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGG--------------VSNSEGVGSTS 180

Query: 181 HTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRL 218
           H  S SHR FDLNI      SP      D EV SP+ TKKPRL
Sbjct: 181 HVSSSSHRGFDLNIIPVQGFSP------DDEVMSPMATKKPRL 192

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BLAST of CmoCh12G005330 vs. ExPASy Swiss-Prot
Match: Q9SSW1 (Zinc finger protein AZF1 OS=Arabidopsis thaliana OX=3702 GN=AZF1 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 100/237 (42.19%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 1   MALEALNSP--TMAAPPPF-------DKPLKPWVKRKRSPRPSLD----------GAPSE 60
           MALE LNSP  T  A P          + L+ W KRKR+ R   D            PSE
Sbjct: 1   MALETLNSPTATTTARPLLRYREEMEPENLEQWAKRKRTKRQRFDHGHQNQETNKNLPSE 60

Query: 61  EEYLALCLIMLARGGASPSPPKPVAAVKSA------YNCPLCDKVFSSYQALGGHKTSHR 120
           EEYLALCL+MLARG A  SPP P    +++      Y C +C K FSSYQALGGHKTSHR
Sbjct: 61  EEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHR 120

Query: 121 KPAS---------VDDQSTSVSGATSSTTTSTSG------GRAHVCNVCHKSFPTGQALG 180
           KP +         + + S S SG+     T  +G      G+ H C++C KSF +GQALG
Sbjct: 121 KPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALG 180

Query: 181 GHKRRHYEGGSAAFGNRQSYSGITMTSSEGVG-------STHTGSHSHRNFDLNIPA 191
           GHKR HY+GG+   GN  S + + + +   V        S  +    HR FDLN+PA
Sbjct: 181 GHKRCHYDGGNNGNGNGSSSNSVELVAGSDVSDVDNERWSEESAIGGHRGFDLNLPA 237

[Close]

BLAST of CmoCh12G005330 vs. ExPASy TrEMBL
Match: A0A6J1GGI8 (zinc finger protein ZAT10-like OS=Cucurbita moschata OX=3662 GN=LOC111454000 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 3.0e-125
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGGASPS 60
           MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGGASPS
Sbjct: 1   MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGGASPS 60

Query: 61  PPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG 120
           PPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG
Sbjct: 61  PPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG 120

Query: 121 GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHS 180
           GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHS
Sbjct: 121 GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHS 180

Query: 181 HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN 229
           HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN
Sbjct: 181 HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN 228

[Close]

BLAST of CmoCh12G005330 vs. ExPASy TrEMBL
Match: A0A6J1KPK4 (zinc finger protein ZAT10-like OS=Cucurbita maxima OX=3661 GN=LOC111496085 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.0e-122
Identity = 223/228 (97.81%), Postives = 223/228 (97.81%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGGASPS 60
           MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLD APSEEEYLALCLIMLARGGASPS
Sbjct: 1   MALEALNSPTMAAPPPFDKPLKPWVKRKRSPRPSLDAAPSEEEYLALCLIMLARGGASPS 60

Query: 61  PPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG 120
           PPKPVA VKSAYNCPLCDK FSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG
Sbjct: 61  PPKPVATVKSAYNCPLCDKAFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG 120

Query: 121 GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHS 180
           GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAA GNRQSYSGITMTSSEGVGSTHT SHS
Sbjct: 121 GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAIGNRQSYSGITMTSSEGVGSTHTVSHS 180

Query: 181 HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN 229
           HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN
Sbjct: 181 HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN 228

[Close]

BLAST of CmoCh12G005330 vs. ExPASy TrEMBL
Match: A0A5A7V360 (Zinc finger protein ZAT10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00790 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.9e-91
Identity = 178/241 (73.86%), Postives = 192/241 (79.67%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPP--------FDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIML 60
           MAL+ALNSPTMA  PP        F +PLKPW KRKRS RPS D +PSEEEYLALCLIML
Sbjct: 1   MALQALNSPTMAVAPPTFHFDEVSFLQPLKPWAKRKRSRRPSFDDSPSEEEYLALCLIML 60

Query: 61  ARGGASP-----SPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSV 120
           ARGG        S P+P  + KS Y CPLCDK FSSYQALGGHKTSHRKP + DDQSTS+
Sbjct: 61  ARGGGGSGNGPRSLPEPTISTKSVYKCPLCDKAFSSYQALGGHKTSHRKPTTADDQSTSL 120

Query: 121 SGATSSTTTSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTS 180
           SG     TTS S G+AHVCNVCHKSFPTGQALGGHKRRHY+GG++A  N QSYSG+T+TS
Sbjct: 121 SG-----TTSNSSGKAHVCNVCHKSFPTGQALGGHKRRHYDGGASAAVNHQSYSGMTLTS 180

Query: 181 SEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSL 229
           SEGVGSTHT SHSHRNFDLNIPAS ALSPKL F GD+EVESPLPTKKPR  WLPEPE SL
Sbjct: 181 SEGVGSTHTVSHSHRNFDLNIPASPALSPKLFFPGDEEVESPLPTKKPRFLWLPEPEISL 236

[Close]

BLAST of CmoCh12G005330 vs. ExPASy TrEMBL
Match: A0A1S3BDQ2 (zinc finger protein ZAT10-like OS=Cucumis melo OX=3656 GN=LOC103488537 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.9e-91
Identity = 178/241 (73.86%), Postives = 192/241 (79.67%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPP--------FDKPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIML 60
           MAL+ALNSPTMA  PP        F +PLKPW KRKRS RPS D +PSEEEYLALCLIML
Sbjct: 1   MALQALNSPTMAVAPPTFHFDEVSFLQPLKPWAKRKRSRRPSFDDSPSEEEYLALCLIML 60

Query: 61  ARGGASP-----SPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSV 120
           ARGG        S P+P  + KS Y CPLCDK FSSYQALGGHKTSHRKP + DDQSTS+
Sbjct: 61  ARGGGGSGNGPRSLPEPTISTKSVYKCPLCDKAFSSYQALGGHKTSHRKPTTADDQSTSL 120

Query: 121 SGATSSTTTSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTS 180
           SG     TTS S G+AHVCNVCHKSFPTGQALGGHKRRHY+GG++A  N QSYSG+T+TS
Sbjct: 121 SG-----TTSNSSGKAHVCNVCHKSFPTGQALGGHKRRHYDGGASAAVNHQSYSGMTLTS 180

Query: 181 SEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSL 229
           SEGVGSTHT SHSHRNFDLNIPAS ALSPKL F GD+EVESPLPTKKPR  WLPEPE SL
Sbjct: 181 SEGVGSTHTVSHSHRNFDLNIPASPALSPKLFFPGDEEVESPLPTKKPRFLWLPEPEISL 236

[Close]

BLAST of CmoCh12G005330 vs. ExPASy TrEMBL
Match: A0A0A0LR53 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354820 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 2.1e-86
Identity = 170/228 (74.56%), Postives = 184/228 (80.70%), Query Frame = 0


Query: 13  APPPFD-------KPLKPWVKRKRSPRPSLDGAPSEEEYLALCLIMLARGGAS-----PS 72
           APPPF        +PLKPW KRKRS RPSLD +PSEEEYLALCLIMLARGG        S
Sbjct: 4   APPPFHFDEVSFLQPLKPWAKRKRSRRPSLDDSPSEEEYLALCLIMLARGGGGGGGSIRS 63

Query: 73  PPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTTTSTSG 132
            P+P  + KS Y CPLCDK FSSYQALGGHKTSHRKP + DDQSTS+SG T+S TTS S 
Sbjct: 64  LPEPTMSTKSLYKCPLCDKAFSSYQALGGHKTSHRKPTTADDQSTSLSG-TTSNTTSNSS 123

Query: 133 GRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHS 192
           G+AHVCNVCHKSFPTGQALGGHKRRHY+GG+ A  N QSYSG+T+TSSEGVGSTHT SHS
Sbjct: 124 GKAHVCNVCHKSFPTGQALGGHKRRHYDGGANAAVNHQSYSGMTLTSSEGVGSTHTVSHS 183

Query: 193 HRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRLFWLPEPENSLN 229
           HRNFDLNIPAS ALS KL F GD+EVESPLPTKKPR  W+PEPE SLN
Sbjct: 184 HRNFDLNIPASPALSQKLFFPGDEEVESPLPTKKPRFLWIPEPEISLN 230

[Close]

BLAST of CmoCh12G005330 vs. TAIR 10
Match: AT1G27730.1 (salt tolerance zinc finger )

HSP 1 Score: 180.3 bits (456), Expect = 1.8e-45
Identity = 114/232 (49.14%), Postives = 142/232 (61.21%), Query Frame = 0


Query: 1   MALEALNSPTMAAP-PPFDKP------LKPWVKRKRSPRPSLD---GAPSEEEYLALCLI 60
           MALEAL SP +A+P PP  +       ++ W K KRS R   D      +EEEYLA CL+
Sbjct: 1   MALEALTSPRLASPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLM 60

Query: 61  MLARGGASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASV------DDQS 120
           +LAR    P PP   A  K +Y C +CDK FSSYQALGGHK SHRK  S       DD S
Sbjct: 61  LLARDNRQPPPPP--AVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHS 120

Query: 121 TSVSGATSSTTTSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGIT 180
           T  S AT+++  +T  G++HVC +C+KSFP+GQALGGHKR HYEG +       + +  +
Sbjct: 121 T--SSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNN-------NINTSS 180

Query: 181 MTSSEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPR 217
           +++SEG GST   S SHR FDLNIP     S   +  GD EV SP+P KKPR
Sbjct: 181 VSNSEGAGSTSHVSSSHRGFDLNIPPIPEFS---MVNGDDEVMSPMPAKKPR 218

[Close]

BLAST of CmoCh12G005330 vs. TAIR 10
Match: AT5G04340.1 (zinc finger of Arabidopsis thaliana 6 )

HSP 1 Score: 153.3 bits (386), Expect = 2.4e-37
Identity = 112/246 (45.53%), Postives = 140/246 (56.91%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPF---DKPL---KPWVKRKRSPRPSLD-GAPSEEEYLALCLIMLA 60
           MALE L SP +++P P    D  L       KR +  R   D  + +E+EY+ALCL++LA
Sbjct: 1   MALETLTSPRLSSPMPTLFQDSALGFHGSKGKRSKRSRSEFDRQSLTEDEYIALCLMLLA 60

Query: 61  RGG----------ASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQ 120
           R G          +S SPP         Y C +CDK FSSYQALGGHK SHRK  S+   
Sbjct: 61  RDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQS 120

Query: 121 STSVSGATSS--TTTSTSGG-----RAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGN 180
           +     +TSS  TT+  SGG     ++HVC++CHKSF TGQALGGHKR HYEG +   G 
Sbjct: 121 AGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKNG--GG 180

Query: 181 RQSYSGITMTSSEGVGSTHTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPR 223
             S    ++++SE VGST   S  HR FDLNIP     S   +  GD+EV SP+P KK R
Sbjct: 181 VSS----SVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFS---MVNGDEEVMSPMPAKKLR 236

[Close]

BLAST of CmoCh12G005330 vs. TAIR 10
Match: AT5G43170.1 (zinc-finger protein 3 )

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37
Identity = 103/223 (46.19%), Postives = 125/223 (56.05%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPFDKPLKPWVK-RKRSPRPSLD----GAPSEEEYLALCLIMLARG 60
           MALEALNSP +   P     ++ W K +KRS R   D       +EEEYLA CL++LAR 
Sbjct: 1   MALEALNSPRLVEDPLRFNGVEQWTKCKKRSKRSRSDLHHNHRLTEEEYLAFCLMLLARD 60

Query: 61  GASPSPPKPVAAVKSAYNCPLCDKVFSSYQALGGHKTSHRKPASVDDQSTSVSGATSSTT 120
           G          A K +Y C +C K FSSYQALGGHK SHR         +   G  +  +
Sbjct: 61  GGDLD--SVTVAEKPSYKCGVCYKTFSSYQALGGHKASHR---------SLYGGGENDKS 120

Query: 121 TSTSGGRAHVCNVCHKSFPTGQALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGST- 180
           T ++  ++HVC+VC KSF TGQALGGHKR HY+GG              +++SEGVGST 
Sbjct: 121 TPSTAVKSHVCSVCGKSFATGQALGGHKRCHYDGG--------------VSNSEGVGSTS 180

Query: 181 HTGSHSHRNFDLNIPASAALSPKLLFAGDQEVESPLPTKKPRL 218
           H  S SHR FDLNI      SP      D EV SP+ TKKPRL
Sbjct: 181 HVSSSSHRGFDLNIIPVQGFSP------DDEVMSPMATKKPRL 192

[Close]

BLAST of CmoCh12G005330 vs. TAIR 10
Match: AT5G67450.1 (zinc-finger protein 1 )

HSP 1 Score: 147.9 bits (372), Expect = 9.9e-36
Identity = 100/237 (42.19%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 1   MALEALNSP--TMAAPPPF-------DKPLKPWVKRKRSPRPSLD----------GAPSE 60
           MALE LNSP  T  A P          + L+ W KRKR+ R   D            PSE
Sbjct: 1   MALETLNSPTATTTARPLLRYREEMEPENLEQWAKRKRTKRQRFDHGHQNQETNKNLPSE 60

Query: 61  EEYLALCLIMLARGGASPSPPKPVAAVKSA------YNCPLCDKVFSSYQALGGHKTSHR 120
           EEYLALCL+MLARG A  SPP P    +++      Y C +C K FSSYQALGGHKTSHR
Sbjct: 61  EEYLALCLLMLARGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSHR 120

Query: 121 KPAS---------VDDQSTSVSGATSSTTTSTSG------GRAHVCNVCHKSFPTGQALG 180
           KP +         + + S S SG+     T  +G      G+ H C++C KSF +GQALG
Sbjct: 121 KPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSICFKSFASGQALG 180

Query: 181 GHKRRHYEGGSAAFGNRQSYSGITMTSSEGVG-------STHTGSHSHRNFDLNIPA 191
           GHKR HY+GG+   GN  S + + + +   V        S  +    HR FDLN+PA
Sbjct: 181 GHKRCHYDGGNNGNGNGSSSNSVELVAGSDVSDVDNERWSEESAIGGHRGFDLNLPA 237

[Close]

BLAST of CmoCh12G005330 vs. TAIR 10
Match: AT3G19580.1 (zinc-finger protein 2 )

HSP 1 Score: 138.3 bits (347), Expect = 7.8e-33
Identity = 108/261 (41.38%), Postives = 135/261 (51.72%), Query Frame = 0


Query: 1   MALEALNSPTMAAPPPFDKP--------LKPWVKRKR-------SPRPSLDGAP------ 60
           MALEA+N+PT +      K         ++PW+KRKR       SP  S    P      
Sbjct: 1   MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKS 60

Query: 61  -----SEEEYLALCLIMLARG--------GASPSPPKPVAAVKSAYNCPLCDKVFSSYQA 120
                +EEEYLALCL+MLA+           S S   P  +    Y C +C+K F SYQA
Sbjct: 61  QNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQSLTPPPESKNLPYKCNVCEKAFPSYQA 120

Query: 121 LGGHKTSHR-KPASVDDQSTSVSGATSSTTTSTSG--------GRAHVCNVCHKSFPTGQ 180
           LGGHK SHR KP +V   ST+   +T+ T +  +G        G+ H C++CHK FPTGQ
Sbjct: 121 LGGHKASHRIKPPTV--ISTTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFPTGQ 180

Query: 181 ALGGHKRRHYEGGSAAFGNRQSYSGITMTSSEGVGSTHTGSHSHRNF-DLNIPASAALSP 218
           ALGGHKR HYEG     G   S S   ++ S  V ST +   SHR F DLN+PA   LS 
Sbjct: 181 ALGGHKRCHYEGNLGGGGGGGSKS---ISHSGSVSSTVSEERSHRGFIDLNLPALPELSL 240

The following BLAST results are available for this feature:

BLAST of CmoCh12G005330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96289	2.5e-44	49.14	Zinc finger protein ZAT10 OS=Arabidopsis thaliana OX=3702 GN=ZAT10 PE=2 SV=1	[more]
Q42430	1.3e-37	46.22	Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1	[more]
O22533	3.3e-36	45.53	Zinc finger protein ZAT6 OS=Arabidopsis thaliana OX=3702 GN=ZAT6 PE=2 SV=1	[more]
Q9SSW0	5.7e-36	46.19	Zinc finger protein AZF3 OS=Arabidopsis thaliana OX=3702 GN=AZF3 PE=1 SV=1	[more]
Q9SSW1	1.4e-34	42.19	Zinc finger protein AZF1 OS=Arabidopsis thaliana OX=3702 GN=AZF1 PE=2 SV=1	[more]

BLAST of CmoCh12G005330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGI8	3.0e-125	100.00	zinc finger protein ZAT10-like OS=Cucurbita moschata OX=3662 GN=LOC111454000 PE=...	[more]
A0A6J1KPK4	7.0e-122	97.81	zinc finger protein ZAT10-like OS=Cucurbita maxima OX=3661 GN=LOC111496085 PE=4 ...	[more]
A0A5A7V360	4.9e-91	73.86	Zinc finger protein ZAT10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S3BDQ2	4.9e-91	73.86	zinc finger protein ZAT10-like OS=Cucumis melo OX=3656 GN=LOC103488537 PE=4 SV=1	[more]
A0A0A0LR53	2.1e-86	74.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354820 PE=4 SV=1	[more]

BLAST of CmoCh12G005330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27730.1	1.8e-45	49.14	salt tolerance zinc finger	[more]
AT5G04340.1	2.4e-37	45.53	zinc finger of Arabidopsis thaliana 6	[more]
AT5G43170.1	4.0e-37	46.19	zinc-finger protein 3	[more]
AT5G67450.1	9.9e-36	42.19	zinc-finger protein 1	[more]
AT3G19580.1	7.8e-33	41.38	zinc-finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 124..146 e-value: 0.052 score: 22.7 coord: 72..94 e-value: 0.011 score: 24.9
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 126..146
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 74..94
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 72..99 score: 9.930481
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 124..146 score: 9.161507
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 69..146 e-value: 2.1E-10 score: 42.7
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 71..96 e-value: 3.8E-13 score: 49.1 coord: 123..147 e-value: 3.6E-12 score: 46.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..121
None	No IPR available	PANTHER	PTHR45988:SF43	ZINC FINGER PROTEIN ZAT10	coord: 1..220
IPR044653	C2H2-type zinc-finger protein AZF1/2/3-like	PANTHER	PTHR45988	C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED	coord: 1..220
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 72..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G005330.1	CmoCh12G005330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity