CmoCh12G005250 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G005250
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr12: 3224363 .. 3225142 (+)
RNA-Seq ExpressionCmoCh12G005250
SyntenyCmoCh12G005250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCATTTTAACAAGCAGGTATGAAATTTAATTCTCCTCAATGTCCTAGCCGCTGGATATTTATTTGAAGGTTCTTCCTTATGAGTGTCTACTTTCAGAATAGCTTCATCCTAATTAATCGTTCTCTTGTCGGTATAGTTGGCTACTCCGTAACATCCTTAGCTGCTCGATATTAATTTTCCGAAGTGCCTACTTTCTGAATAGCTTCATCCTATTTAATTGTTCTCTTGTCGGTATAGTTGGTTACTTTGTAACATCGTTACGTATAGCATTTTTATAAGTCAATAAGTCGATGCGTTTCATGCATCTCTTACAAATGTTTGACTGCATATCTATCGTGCAAATAATGGTTGCATCCAATTTCAGTGGGATTTTCAAATGGGAGAAATCTTGATTGAAGTTAGAAACTTAAAAAGAAAGCCAATCAACAAGAACACTGTACAATAATTCTCCACCTTTGTGTTCTTTCTTTCATGAATATGATGATATGGTTAAAAATAAAATAAGGTACAGATGAACAAGCCAAGACATTGGCAGGGCTTGGAGAAGGGATACAGGCTAATAAGTTATTAAGGAGACGACAGGTTTTAGCTTCCATGGAAATGGATTTGCAGAGATTCTTCTGTGTCTATGTCCAGGTGAAAGCAATGGGGCTACCCACTATGTGTTTCCCGTCTGACCATTCCAGACGAGAAAAGCTCTCGGTCCCCGACGGCATTGGAGAAGCAATGAAAGTCACTGTATAACTCTTTTGCTCATTTGCCTCTGCAAAACTCA

mRNA sequence

ATGATTCATTTTAACAAGCAGAATAGCTTCATCCTAATTAATCGTTCTCTTGTCGATGAACAAGCCAAGACATTGGCAGGGCTTGGAGAAGGGATACAGGCTAATAAGTTATTAAGGAGACGACAGGTTTTAGCTTCCATGGAAATGGATTTGCAGAGATTCTTCTGTGTCTATGTCCAGGTGAAAGCAATGGGGCTACCCACTATGTGTTTCCCGTCTGACCATTCCAGACGAGAAAAGCTCTCGGTCCCCGACGGCATTGGAGAAGCAATGAAAGTCACTGTATAACTCTTTTGCTCATTTGCCTCTGCAAAACTCA

Coding sequence (CDS)

ATGATTCATTTTAACAAGCAGAATAGCTTCATCCTAATTAATCGTTCTCTTGTCGATGAACAAGCCAAGACATTGGCAGGGCTTGGAGAAGGGATACAGGCTAATAAGTTATTAAGGAGACGACAGGTTTTAGCTTCCATGGAAATGGATTTGCAGAGATTCTTCTGTGTCTATGTCCAGGTGAAAGCAATGGGGCTACCCACTATGTGTTTCCCGTCTGACCATTCCAGACGAGAAAAGCTCTCGGTCCCCGACGGCATTGGAGAAGCAATGAAAGTCACTGTATAA

Protein sequence

MIHFNKQNSFILINRSLVDEQAKTLAGLGEGIQANKLLRRRQVLASMEMDLQRFFCVYVQVKAMGLPTMCFPSDHSRREKLSVPDGIGEAMKVTV
Homology
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BLAST of CmoCh12G005250 vs. ExPASy TrEMBL
Match: A0A445BUR1 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g038928 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.3e-05
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 59 VQVKAMGLPTMCFPSDHSRREKLSVPDGIGEAMKVTV 96
          VQ+KAMGL T+CFPSDH R+ KL VPDGI +A+ VTV
Sbjct: 40 VQLKAMGLVTLCFPSDHCRKAKLLVPDGIEDAVNVTV 76

The following BLAST results are available for this feature:
BLAST of CmoCh12G005250 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh12G005250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A445BUR11.3e-0570.27Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A08g038928 PE=4 SV=1[more]
BLAST of CmoCh12G005250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G005250.1CmoCh12G005250.1mRNA