CmoCh12G004770 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G004770
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	calmodulin-like protein 12
Location	Cmo_Chr12: 2915903 .. 2916430 (-)
RNA-Seq Expression	CmoCh12G004770
Synteny	CmoCh12G004770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAGAAACGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTTTCTCCGTGATGTTCGAGGATCAACTCAACTCAACCATCAAAGGTTTTTATCTAAGATTCCAAAAACAAACGACAAGGGTGCACACCAGCTTAGTTCAAATGCTCATACAAACCCAAAAATACAAGTACAAGGCACAGCTACAAAATCCTCGACAAAAGTTCTTAGTGAAAAGGTATCTAATGTGCCACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAATATTATGACAGCGACAAAGATGGTTTCCTGAACACAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCTCAGTACGCTATGACTTTTGCTGATGCTAATAATGATGGTCTTATTAGTGAAGCTGAACTTGAAAAACTCATAGATTATGCCTGTAAAATCATCAAGAAGAAATGA

mRNA sequence

ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAGAAACGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTTTCTCCGTGATGTTCGAGGATCAACTCAACTCAACCATCAAAGGTTTTTATCTAAGATTCCAAAAACAAACGACAAGGGTGCACACCAGCTTAGTTCAAATGCTCATACAAACCCAAAAATACAAGTACAAGGCACAGCTACAAAATCCTCGACAAAAGTTCTTAGTGAAAAGGTATCTAATGTGCCACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAATATTATGACAGCGACAAAGATGGTTTCCTGAACACAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCTCAGTACGCTATGACTTTTGCTGATGCTAATAATGATGGTCTTATTAGTGAAGCTGAACTTGAAAAACTCATAGATTATGCCTGTAAAATCATCAAGAAGAAATGA

Coding sequence (CDS)

ATGTCTGTCTCCATACTCCAAGCTTGGGCCGAGAATGAAGCAAATGAATTGATGAAGAAGTATGACAGAAACGGTGATGGTGTTCTCACTAAAGAAGAGCTACAAGTCTTTCTCCGTGATGTTCGAGGATCAACTCAACTCAACCATCAAAGGTTTTTATCTAAGATTCCAAAAACAAACGACAAGGGTGCACACCAGCTTAGTTCAAATGCTCATACAAACCCAAAAATACAAGTACAAGGCACAGCTACAAAATCCTCGACAAAAGTTCTTAGTGAAAAGGTATCTAATGTGCCACTTAGTAGAGAGCAGATAAAGAAGATTTTCAAATATTATGACAGCGACAAAGATGGTTTCCTGAACACAAGAGAGGTAACGAAAGCATTTAGCTTTCTAGGCTCAATTAATCCATTCTACAAGGCTCAGTACGCTATGACTTTTGCTGATGCTAATAATGATGGTCTTATTAGTGAAGCTGAACTTGAAAAACTCATAGATTATGCCTGTAAAATCATCAAGAAGAAATGA

Protein sequence

MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTNDKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK

Homology

[Close]

BLAST of CmoCh12G004770 vs. ExPASy Swiss-Prot
Match: Q9LQN4 (Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.5e-07
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 12  NEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTNDKGAHQLSSNA 71
           NE  E+ + +DRN DG LT+ EL   LR +    + +  +F + I K + K         
Sbjct: 15  NELREIFRSFDRNKDGSLTQLELGSLLRAL--GVKPSPDQFETLIDKADTK--------- 74

Query: 72  HTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSF 131
            +N  ++        S ++LS      P + EQ+ ++F+ +D+D +GF+   E+  + + 
Sbjct: 75  -SNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAK 134

Query: 132 LGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA 169
           LG      +    +  AD++ DG I+  E  K I+ A
Sbjct: 135 LGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of CmoCh12G004770 vs. ExPASy Swiss-Prot
Match: Q9AWK2 (Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 GN=CML11 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.7e-06
Identity = 41/156 (26.28%), Postives = 72/156 (46.15%), Query Frame = 0


Query: 13  EANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTNDKGAHQLSSNAH 72
           E  E+ + +DRNGDG LT+ EL   LR             L   P T++  +    ++ +
Sbjct: 64  ELREIFRSFDRNGDGSLTQLELGSLLRS------------LGLKPSTDELDSLIQRADTN 123

Query: 73  TNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSFL 132
           +N  I+        + ++L ++    P S +QI+++F  +D D +GF+   E+  + + L
Sbjct: 124 SNGLIEFSEFVALVAPELLYDR---APYSEDQIRRLFNIFDRDGNGFITAAELAHSMAKL 183

Query: 133 GSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA 169
           G      +    +  AD + DG IS  E  + I  A
Sbjct: 184 GHALTVKELTGMIKEADTDGDGRISFQEFSRAITAA 204

[Close]

BLAST of CmoCh12G004770 vs. ExPASy Swiss-Prot
Match: Q6L5F4 (Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 40/148 (27.03%), Postives = 70/148 (47.30%), Query Frame = 0


Query: 13  EANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTNDKGAHQLSSNAH 72
           +  EL +++D NGDG LT+ EL   LR             L   P  ++  A     +A+
Sbjct: 25  QLRELFRRFDMNGDGSLTQLELAALLRS------------LGLRPTGDEVHALLAGMDAN 84

Query: 73  TNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSFL 132
            N  ++    A  +   VL+ +   V   + Q+ ++F+ +D D +GF++  E+ ++ + L
Sbjct: 85  GNGSVEFDELAA-AIAPVLTTQTHLV--DQAQLLEVFRAFDRDGNGFISAAELARSMARL 144

Query: 133 GSINPFYKAQYAMTFADANNDGLISEAE 161
           G    F +    M  AD + DG+IS  E
Sbjct: 145 GQPLTFEELTRMMRDADTDGDGVISFKE 157

[Close]

BLAST of CmoCh12G004770 vs. ExPASy TrEMBL
Match: A0A6J1GIQ8 (probable calcium-binding protein CML11 OS=Cucurbita moschata OX=3662 GN=LOC111454532 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.1e-90
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTN 60
           MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTN
Sbjct: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTN 60

Query: 61  DKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL 120
           DKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL
Sbjct: 61  DKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL 120

Query: 121 NTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK 176
           NTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK
Sbjct: 121 NTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK 175

[Close]

BLAST of CmoCh12G004770 vs. ExPASy TrEMBL
Match: A0A6J1GJT8 (probable calcium-binding protein CML11 OS=Cucurbita moschata OX=3662 GN=LOC111454533 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.2e-84
Identity = 164/173 (94.80%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 3   VSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTNDK 62
           +SIL+AWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQ FLSKIPKTNDK
Sbjct: 1   MSILKAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQGFLSKIPKTNDK 60

Query: 63  GAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNT 122
           GAHQLSSNAHTN KIQVQG  TKSSTKVLSEK+SNVPLSREQIKKIFKYYDSDKDGFLN 
Sbjct: 61  GAHQLSSNAHTNQKIQVQGKVTKSSTKVLSEKISNVPLSREQIKKIFKYYDSDKDGFLNI 120

Query: 123 REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK 176
           REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISE ELEKLIDYACKIIKKK
Sbjct: 121 REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEVELEKLIDYACKIIKKK 173

[Close]

BLAST of CmoCh12G004770 vs. ExPASy TrEMBL
Match: A0A6J1KM01 (probable calcium-binding protein CML11 OS=Cucurbita maxima OX=3661 GN=LOC111496473 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.9e-83
Identity = 162/175 (92.57%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTN 60
           MSVSILQ WAENEANELMKKYD+NGDG+LTKEELQVFLRDVRGSTQLN+Q FLSKIPKTN
Sbjct: 1   MSVSILQTWAENEANELMKKYDKNGDGILTKEELQVFLRDVRGSTQLNYQGFLSKIPKTN 60

Query: 61  DKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL 120
           DKGAH+LSSN HTNPKIQVQ   TKSSTKVLSEKVSNV LSREQIKKIFKYYDSDKDGFL
Sbjct: 61  DKGAHKLSSNTHTNPKIQVQDKVTKSSTKVLSEKVSNVSLSREQIKKIFKYYDSDKDGFL 120

Query: 121 NTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK 176
           N REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISE ELEKLIDYACKIIKKK
Sbjct: 121 NIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISETELEKLIDYACKIIKKK 175

[Close]

BLAST of CmoCh12G004770 vs. ExPASy TrEMBL
Match: A0A6J1GII5 (probable calcium-binding protein CML11 OS=Cucurbita moschata OX=3662 GN=LOC111454483 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.3e-82
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTN 60
           MSVSILQAWAEN+ANEL+KKYD+NGDGVLTKEELQVFLRDVRGSTQLN+Q FLSKIP+TN
Sbjct: 1   MSVSILQAWAENKANELIKKYDKNGDGVLTKEELQVFLRDVRGSTQLNNQGFLSKIPRTN 60

Query: 61  DKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL 120
           DKGAH+L+SN  TNPKIQVQ  ATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL
Sbjct: 61  DKGAHKLNSNPRTNPKIQVQSKATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL 120

Query: 121 NTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK 176
           N REVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA KIIKKK
Sbjct: 121 NIREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYAYKIIKKK 175

[Close]

BLAST of CmoCh12G004770 vs. ExPASy TrEMBL
Match: A0A6J1KK48 (probable calcium-binding protein CML14 OS=Cucurbita maxima OX=3661 GN=LOC111496448 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80
Identity = 160/175 (91.43%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTN 60
           MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVF RDVRGSTQLN+Q FLS IPKTN
Sbjct: 1   MSVSILQAWAENEANELMKKYDRNGDGVLTKEELQVFQRDVRGSTQLNNQGFLSNIPKTN 60

Query: 61  DKGAHQLSSNAHTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFL 120
           DKGA++LSSNAHTNPKIQVQ  ATKSSTK  SEKVSNV LSREQIKKIFKYYDSDKDGFL
Sbjct: 61  DKGANKLSSNAHTNPKIQVQDKATKSSTKAPSEKVSNVRLSREQIKKIFKYYDSDKDGFL 120

Query: 121 NTREVTKAFSFLGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYACKIIKKK 176
           N REVTKAFSFLGSINPFYKAQYAMTF DANND LI+EAELEKLIDYACKIIKKK
Sbjct: 121 NIREVTKAFSFLGSINPFYKAQYAMTFVDANNDSLINEAELEKLIDYACKIIKKK 175

[Close]

BLAST of CmoCh12G004770 vs. TAIR 10
Match: AT1G32250.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-08
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 12  NEANELMKKYDRNGDGVLTKEELQVFLRDVRGSTQLNHQRFLSKIPKTNDKGAHQLSSNA 71
           NE  E+ + +DRN DG LT+ EL   LR +    + +  +F + I K + K         
Sbjct: 15  NELREIFRSFDRNKDGSLTQLELGSLLRAL--GVKPSPDQFETLIDKADTK--------- 74

Query: 72  HTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSF 131
            +N  ++        S ++LS      P + EQ+ ++F+ +D+D +GF+   E+  + + 
Sbjct: 75  -SNGLVEFPEFVALVSPELLSPAKRTTPYTEEQLLRLFRIFDTDGNGFITAAELAHSMAK 134

Query: 132 LGSINPFYKAQYAMTFADANNDGLISEAELEKLIDYA 169
           LG      +    +  AD++ DG I+  E  K I+ A
Sbjct: 135 LGHALTVAELTGMIKEADSDGDGRINFQEFAKAINSA 159

[Close]

BLAST of CmoCh12G004770 vs. TAIR 10
Match: AT2G41100.3 (Calcium-binding EF hand family protein )

HSP 1 Score: 46.2 bits (108), Expect = 3.1e-05
Identity = 38/152 (25.00%), Postives = 72/152 (47.37%), Query Frame = 0


Query: 13  EANELMKKYDRNGDGVLTKEELQVFLRDV-RGSTQLNHQRFLSKIPKTNDKGAHQLSSNA 72
           E  E  + +D+NGDG +TK+EL+  +  + +  T+ + Q  ++++    D G        
Sbjct: 66  EYRESFRLFDKNGDGSITKKELRTVMFSLGKNRTKADLQDMMNEVDLDGD-GTIDFPEFL 125

Query: 73  HTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQI---KKIFKYYDSDKDGFLNTREVTKA 132
           +   K Q    A + + K + +      L+ +QI   ++ F+ +D + DG++   E+   
Sbjct: 126 YLMAKNQGHDQAPRHTKKTMVD----YQLTDDQILEFREAFRVFDKNGDGYITVNELRTT 185

Query: 133 FSFLGSINPFYKAQYAMTFADANNDGLISEAE 161
              LG      + Q  +  ADA+ DG IS +E
Sbjct: 186 MRSLGETQTKAELQDMINEADADGDGTISFSE 212

[Close]

BLAST of CmoCh12G004770 vs. TAIR 10
Match: AT2G41100.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 35/149 (23.49%), Postives = 67/149 (44.97%), Query Frame = 0


Query: 13  EANELMKKYDRNGDGVLTKEELQVFLRDV-RGSTQLNHQRFLSKIPKTNDKGAHQLSSNA 72
           E  E  + +D+NGDG +TK+EL   +R +    T+ + Q  +++     D G        
Sbjct: 12  EYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGD-GTIDFPEFL 71

Query: 73  HTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSF 132
               K Q    A + + K +++K+++  ++  + ++ F+ +D + DG +  +E+      
Sbjct: 72  CVMAKNQGHDQAPRHTKKTMADKLTDDQIT--EYRESFRLFDKNGDGSITKKELRTVMFS 131

Query: 133 LGSINPFYKAQYAMTFADANNDGLISEAE 161
           LG        Q  M   D + DG I   E
Sbjct: 132 LGKNRTKADLQDMMNEVDLDGDGTIDFPE 157

[Close]

BLAST of CmoCh12G004770 vs. TAIR 10
Match: AT2G41100.4 (Calcium-binding EF hand family protein )

HSP 1 Score: 42.0 bits (97), Expect = 5.9e-04
Identity = 35/149 (23.49%), Postives = 67/149 (44.97%), Query Frame = 0


Query: 13  EANELMKKYDRNGDGVLTKEELQVFLRDV-RGSTQLNHQRFLSKIPKTNDKGAHQLSSNA 72
           E  E  + +D+NGDG +TK+EL   +R +    T+ + Q  +++     D G        
Sbjct: 12  EYRESFRLFDKNGDGSITKKELGTMMRSIGEKPTKADLQDLMNEADLDGD-GTIDFPEFL 71

Query: 73  HTNPKIQVQGTATKSSTKVLSEKVSNVPLSREQIKKIFKYYDSDKDGFLNTREVTKAFSF 132
               K Q    A + + K +++K+++  ++  + ++ F+ +D + DG +  +E+      
Sbjct: 72  CVMAKNQGHDQAPRHTKKTMADKLTDDQIT--EYRESFRLFDKNGDGSITKKELRTVMFS 131

Query: 133 LGSINPFYKAQYAMTFADANNDGLISEAE 161
           LG        Q  M   D + DG I   E
Sbjct: 132 LGKNRTKADLQDMMNEVDLDGDGTIDFPE 157

The following BLAST results are available for this feature:

BLAST of CmoCh12G004770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQN4	5.5e-07	26.75	Probable calcium-binding protein CML17 OS=Arabidopsis thaliana OX=3702 GN=CML17 ...	[more]
Q9AWK2	2.7e-06	26.28	Probable calcium-binding protein CML11 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q6L5F4	1.2e-04	27.03	Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CmoCh12G004770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIQ8	1.1e-90	100.00	probable calcium-binding protein CML11 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1GJT8	1.2e-84	94.80	probable calcium-binding protein CML11 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KM01	2.9e-83	92.57	probable calcium-binding protein CML11 OS=Cucurbita maxima OX=3661 GN=LOC1114964...	[more]
A0A6J1GII5	9.3e-82	92.00	probable calcium-binding protein CML11 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KK48	1.7e-80	91.43	probable calcium-binding protein CML14 OS=Cucurbita maxima OX=3661 GN=LOC1114964...	[more]

BLAST of CmoCh12G004770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32250.1	3.9e-08	26.75	Calcium-binding EF-hand family protein	[more]
AT2G41100.3	3.1e-05	25.00	Calcium-binding EF hand family protein	[more]
AT2G41100.1	5.9e-04	23.49	Calcium-binding EF hand family protein	[more]
AT2G41100.4	5.9e-04	23.49	Calcium-binding EF hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 13..41 e-value: 2.1E-5 score: 34.0 coord: 140..168 e-value: 21.0 score: 7.1 coord: 104..132 e-value: 1.4 score: 16.5
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 102..164 e-value: 2.0E-7 score: 31.4
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 13..40 e-value: 2.2E-6 score: 26.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 9..44 score: 12.923368
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 100..135 score: 13.034948
None	No IPR available	GENE3D	1.10.238.10		coord: 9..44 e-value: 1.5E-7 score: 32.9
None	No IPR available	GENE3D	1.10.238.10		coord: 48..166 e-value: 2.4E-12 score: 48.8
None	No IPR available	PANTHER	PTHR10891:SF911	SUBFAMILY NOT NAMED	coord: 88..170
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 88..170
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 113..125
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 149..161
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 22..34
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 12..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G004770.1	CmoCh12G004770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding