CmoCh12G004690 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G004690
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	B3 domain-containing protein
Location	Cmo_Chr12: 2870352 .. 2873122 (+)
RNA-Seq Expression	CmoCh12G004690
Synteny	CmoCh12G004690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCACACAGAGACCAAACCCTAAGAGGAGACCATGGGAATCGCTAATCTCTCATACGAGGAATGTCGTCGTAAGAGAGTCGAAGAAAACAAGAAGAGAATGGATGCCCTAAATCTGCCCTTGCTTTCTCAAGCTCTCATCGATTCTTCTCCTTCCAAATCCAAATCCTCCCCTGTAATTTCATTTCGTTTTTTCTTTTTCCTTCTCAATCTTCTGTTGCTCTGTGTTTTTCCATGGAATATTGAGCTTCTTTTGCGGCTTAATCGATCCAGAGTAAACAGGCCAAGCATCGTGAGATGAAGAAACAACTGGTGGTAGTGAGGAGATCCAGTCGTGTAGCAAAACAACCAGGGCCTGTTTACGCTGAAGTAAGCCTTCCGTGTTATGCTAAACCTAACTGGATGATGAACTAGGGTTTTATTGCTGCTTTTTAACGGATTGGAAATTCTTGTCCTGACAATCCCTTTGTTTCTGGTTTTGTTTTCGTTTCTTTTCAATTAATCTGGCAGGTTCTTGTCAATCGCGTGGCGATTCCTAAAAGGTATCTCTGCTGAAATGGAAATAGAAACAAAGATTAAAGGCTCTCCATAGAGTTGAATCGTTCAGTACTGTTACTCGTTTTCTTTTTTTTCTTTTTTCTTGGGATTATGTAGATTCTCCAGCGCAAGAGATTATCCAGACCATTTTTTTGCTTCGGATGAAGCAAGAAAAAATGCGTTTGAAAGAGCTGAGCGATTACAATCTGTATTGGAGCCAAATTATCCCAACTTTATAAAGTCAATGGTTCGGTCTCATGTAAGCGGTTGTTTCTGGCTGGTAAGCTAAGTAGAATTATCCGTTGAGCGTATGATCTTCTAGCCCTATTTCCTCTCTGTCTGTCAAACTTGTTGTGCTGGATCTTAGAAACCACGACTTTCCACACTAGTACTCATATTAGCATAAGCTTTCATAACTTTGGAAACCAAAATGTTTCATACCAATAGAGATGTGTTCCTTATCTATAAATCCATGATCAACTCCTTAATTAACGGACCTAGGACTTCTCTCCCAACAATTCTCAACATTGGATGTGGTATTAGTCAATTAGAAACTATTTTATAGGAAAAAATACTTGTAAACGCAGGGGCTTCCTTCTCATTTCTGCAAGGAGCACCTACCAACCAATGATGGAGTAATGACTTTAATGGATGAAGGTGGCGATGAGTATCCAATAATATATTTGGCGCGAAAGACAGGGTTTAGTGGAGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCAGATGGGGATGCTGTGATTTTTCAACTCATTAAACCTACAACCTGCAAGGTGATTGTTCAAAGTTCTTCAACGTTTGTGTTGTCTGCATAAGTTTTCAGAAACAAGCACAATATATTGGTGTCTGTGTATGCATTTTTTTGGTGCACTATCACTCTTCAGTTCTCATTCTAGTTTACCTTACTCACCCTTTATTTGTTTACTTTTGTTTTCAAAATTTACCTTTTTTTAGTTTTGAAAATCTGTTGGTTTAGCTTGTGGCTGACAAGACAAAGGAGAGCATTACTGATGGGAGAAATTTTTTGGTTAAATTACAAATTTGGTTCCTGCCATTCGAAGAAAGTTAAAATCTTGTCTTTATAATTTTAAAAGTTGGAATTTTAGCAATATAATTTGATAAAATGTCATAAGTAGTTTCCATGGTTTGCTAAATAGTTTTAAATCATAAGGATAAGATTCTAATTTTCTTGAAATTATAGGACCATACTCTTTCAAATATATAGGGATTATGTATGTTTCTTGCATAACTGTTCTTAACACAGTACATCTTGGTGTAGTCCACATATCTATAGTCTTTGACTGAACAGACCTCAATTACTTAATTTTTTTTCTGTTCTTCTTTCAGGTATACATCTTTCGAGTTGGTGACTCAAAAGAAGATAGCGATTCTGACAGTAGCTAAGTGATACTTACCTATCCTAAGTCAGGTAATCTTAAAACGAAATTACTGAACTAATTCTGAATGCTGAGTTCCCAATCACTAATAAACTTATTTCTTTTTCACTTCTAAATTTCTGTGAATTTCTCGAAGTTTTTCTTTCTATTATTACTACTATTCTTTGGCCGGTGCAACAAATAACTGGAATTCATGTTGATGTTAATGAGATGCATTCCTAGGATTTGTTGGTTCTGTCATTGCTCATAGTTTACATTGAACCCACATGAAATTATTAATTGACTTTTAAGAGTGGTGCTTTTAAGTGAAGCAATTTTCTTGCAAAGACACTTTGAAAAGATATCATTTTTAAACGTTCATATTGTGAATACTTGTGAAGATACTTCTAATTGGTTAAGAAGCTCTTTTCATCTTCCACTGGTTGACCGATTCATATATCTTGTAAGATCACAGTCTCCTCCTCTAAGGTTATTTTCCTGTTCATTTCAGGAGATAATGGGAAGGAAGTGCACATAATGCAGAAGTCAGGCTTGGTTTTGGAGTAAAAAGCAATCTCTCTGTCTTGTACAATCTTGTGTCTGCTGATGAATGGGGTTTGTCTATCAAGTCTCCCTTTGCCCTAACATATCTTCATTTCTTCTTCTCCTTATTAAATTAAACCCCTTGCTCTTTGTTTTCACTTAAGACTTCTGTGTTTAGCTGATAGATTTGTGCAGATTTTGAACGGGAGAGCCTCGGGGTTTGTAGTGGGATGAATCCTTGTGTAATCTATAATGTATACTAGAGTTTTTAAAACCAAGTCTCTGATTTAAGTAACA

mRNA sequence

TCACACAGAGACCAAACCCTAAGAGGAGACCATGGGAATCGCTAATCTCTCATACGAGGAATGTCGTCGTAAGAGAGTCGAAGAAAACAAGAAGAGAATGGATGCCCTAAATCTGCCCTTGCTTTCTCAAGCTCTCATCGATTCTTCTCCTTCCAAATCCAAATCCTCCCCTAGTAAACAGGCCAAGCATCGTGAGATGAAGAAACAACTGGTGGTAGTGAGGAGATCCAGTCGTGTAGCAAAACAACCAGGGCCTGTTTACGCTGAAGTTCTTGTCAATCGCGTGGCGATTCCTAAAAGATTCTCCAGCGCAAGAGATTATCCAGACCATTTTTTTGCTTCGGATGAAGCAAGAAAAAATGCGTTTGAAAGAGCTGAGCGATTACAATCTGTATTGGAGCCAAATTATCCCAACTTTATAAAGTCAATGGTTCGGTCTCATGTAAGCGGTTGTTTCTGGCTGGGGCTTCCTTCTCATTTCTGCAAGGAGCACCTACCAACCAATGATGGAGTAATGACTTTAATGGATGAAGGTGGCGATGAGTATCCAATAATATATTTGGCGCGAAAGACAGGGTTTAGTGGAGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCAGATGGGGATGCTGTGATTTTTCAACTCATTAAACCTACAACCTGCAAGGTATACATCTTTCGAGTTGGTGACTCAAAAGAAGATAGCGATTCTGACAGTAGCTAAGTGATACTTACCTATCCTAAGTCAGGAGATAATGGGAAGGAAGTGCACATAATGCAGAAGTCAGGCTTGGTTTTGGAGTAAAAAGCAATCTCTCTGTCTTGTACAATCTTGTGTCTGCTGATGAATGGGGTTTGTCTATCAAGTCTCCCTTTGCCCTAACATATCTTCATTTCTTCTTCTCCTTATTAAATTAAACCCCTTGCTCTTTGTTTTCACTTAAGACTTCTGTGTTTAGCTGATAGATTTGTGCAGATTTTGAACGGGAGAGCCTCGGGGTTTGTAGTGGGATGAATCCTTGTGTAATCTATAATGTATACTAGAGTTTTTAAAACCAAGTCTCTGATTTAAGTAACA

Coding sequence (CDS)

ATGGGAATCGCTAATCTCTCATACGAGGAATGTCGTCGTAAGAGAGTCGAAGAAAACAAGAAGAGAATGGATGCCCTAAATCTGCCCTTGCTTTCTCAAGCTCTCATCGATTCTTCTCCTTCCAAATCCAAATCCTCCCCTAGTAAACAGGCCAAGCATCGTGAGATGAAGAAACAACTGGTGGTAGTGAGGAGATCCAGTCGTGTAGCAAAACAACCAGGGCCTGTTTACGCTGAAGTTCTTGTCAATCGCGTGGCGATTCCTAAAAGATTCTCCAGCGCAAGAGATTATCCAGACCATTTTTTTGCTTCGGATGAAGCAAGAAAAAATGCGTTTGAAAGAGCTGAGCGATTACAATCTGTATTGGAGCCAAATTATCCCAACTTTATAAAGTCAATGGTTCGGTCTCATGTAAGCGGTTGTTTCTGGCTGGGGCTTCCTTCTCATTTCTGCAAGGAGCACCTACCAACCAATGATGGAGTAATGACTTTAATGGATGAAGGTGGCGATGAGTATCCAATAATATATTTGGCGCGAAAGACAGGGTTTAGTGGAGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCAGATGGGGATGCTGTGATTTTTCAACTCATTAAACCTACAACCTGCAAGGTATACATCTTTCGAGTTGGTGACTCAAAAGAAGATAGCGATTCTGACAGTAGCTAA

Protein sequence

MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQLVVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS

Homology

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BLAST of CmoCh12G004690 vs. ExPASy Swiss-Prot
Match: Q1G3M3 (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana OX=3702 GN=At3g19184 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-52
Identity = 122/230 (53.04%), Postives = 150/230 (65.22%), Query Frame = 0


Query: 4   ANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMK--KQLV 63
           + LSYE+ R  RVEENKKRM  LNL  L+Q+L  SS S S S PS  AK R M+      
Sbjct: 4   SELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPS-PAKPRTMRIPVDFS 63

Query: 64  VVRRSSRVAKQPGPVYAEV-LVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 123
            VRRSSR AK P P Y E  L      P+R S  RD  +  +ASD+AR  AF+RAE+LQS
Sbjct: 64  EVRRSSR-AKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQS 123

Query: 124 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 183
            L+  Y +F K M++SHV+G FWLGLP  FCK H+P  D +MTL+DE  +E    YLA+K
Sbjct: 124 SLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQK 183

Query: 184 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVG-DSKEDSDSD 230
            G SGGW+GF++ H+L DGDAV+F LI  TT KVYI RV  D+  DSD +
Sbjct: 184 NGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVNDDANNDSDGN 231

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BLAST of CmoCh12G004690 vs. ExPASy Swiss-Prot
Match: Q9FMZ4 (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana OX=3702 GN=At5g42700 PE=2 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 1.0e-48
Identity = 110/223 (49.33%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 8   YEECRRKRVEENKKRMDALNLPLLSQAL----IDSSPSKSKSSPSKQAKHREMKKQLVVV 67
           YEE R KRVEENKKRM+ALNLP LSQ L    +  SP K +S P      R  +K++V V
Sbjct: 9   YEEFRLKRVEENKKRMEALNLPKLSQILNSTSVKISPMKKRSIP------RTPEKKMVDV 68

Query: 68  RRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQSVLE 127
           +R              V + R  + K+    RD  +  + S+E R  A  RA + Q  L 
Sbjct: 69  KR--------------VHIQRRGVGKK----RDLLNRVYVSEEIRDEAISRANKFQDELG 128

Query: 128 PNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARKTGF 187
             YP+F+KSM++SHVSG FWLGLP  FCK HL  +DGV+TL+DE G+EY  IYLARK G 
Sbjct: 129 SGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGL 188

Query: 188 SGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDS 227
           SGGW GF+VAH LA GD ++F+L++ T  KVYI RVG   E S
Sbjct: 189 SGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESS 207

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BLAST of CmoCh12G004690 vs. ExPASy Swiss-Prot
Match: Q10QS9 (B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0184500 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-42
Identity = 102/229 (44.54%), Postives = 138/229 (60.26%), Query Frame = 0


Query: 7   SYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQLVV---V 66
           +YE  R + VEENK++M+ALNL  LS A+   + +    SP KQ + R ++  +V     
Sbjct: 11  AYEAARERTVEENKRKMEALNLRHLSAAI---AVAPKTPSPMKQKRRRIIEAAVVAPSPP 70

Query: 67  RRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFF------ASDEARKNAFERAER 126
           RRS R+A  P   YAEV  +     KR  S R   D  +       S EAR  A  +AE 
Sbjct: 71  RRSRRLANLPEVKYAEVAPDGAERMKR--SPRKAIDSIYLATRGSISMEARLEAARKAEE 130

Query: 127 LQSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYL 186
           L+S L+P +P+F+K M+ SHV   FWLGLP HFC+ +LP +D ++TL+DE  +++   YL
Sbjct: 131 LESQLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTLLDEKDEQFDTNYL 190

Query: 187 ARKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFR--VGDSKE 225
           A K G SGGW GF++ H L DGDA +FQL+KPTT KV+I R  V D  E
Sbjct: 191 AYKNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFKVHIIRATVDDGNE 234

[Close]

BLAST of CmoCh12G004690 vs. ExPASy Swiss-Prot
Match: Q69V36 (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0194400 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.7e-41
Identity = 98/228 (42.98%), Postives = 136/228 (59.65%), Query Frame = 0


Query: 7   SYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREM----KKQLVV 66
           SYEE RR++VE NK++++ L L  LS A+ +S+   SK SP KQ K +        +   
Sbjct: 13  SYEEQRRRQVEANKRKLEELRLHHLSAAVRESA---SKPSPVKQRKRKARALPGAGEDAP 72

Query: 67  VRRSSRVAKQP-GPVYAEVLVNRVAIPKRF--SSARDYPDHFFASDEARKNAFERAERLQ 126
           +RRS RVA  P  P Y +   +     +R      RD  +  +A+DE R  A   A+ L+
Sbjct: 73  LRRSGRVANLPEKPKYRDEFQDFEKRIRRSYGGKRRDLSNRVYATDEQRDYAINAAQELE 132

Query: 127 SVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLAR 186
             L  +YP F+K M++SHV+G FWL LP+HF +++LP  D  + L+DE  DE+  +YLA 
Sbjct: 133 EELGSDYPIFVKPMLQSHVTGGFWLSLPTHFSRKYLPKRDETIRLVDEEDDEFDTLYLAN 192

Query: 187 KTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSD 228
           K G SGGW+GFS+AHKL DGD ++FQLI+ T  KVYI R     E  D
Sbjct: 193 KRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFKVYIIRASSYYETDD 237

[Close]

BLAST of CmoCh12G004690 vs. ExPASy Swiss-Prot
Match: Q5KQI4 (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0481400 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-40
Identity = 91/224 (40.62%), Postives = 134/224 (59.82%), Query Frame = 0


Query: 4   ANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQLVVV 63
           A  +YEE RRKRV EN K ++ L +  +S++L++++    KS+ +     ++ +     V
Sbjct: 10  AGAAYEEERRKRVLENLKHLEDLGIKKMSKSLLEAA-RLQKSTRASPKPRKKFEVGATEV 69

Query: 64  RRSSRVAKQPGPVYAEVLVNRVAIPKRFS------SARDYPDHFFASDEARKNAFERAER 123
           RRSSR             +N     +R S        RDY     AS E ++ AF++AER
Sbjct: 70  RRSSRARNSVSYKENFDELNSFLCRRRGSRIRSTEQGRDYTGR-VASYEQQQRAFKKAER 129

Query: 124 LQSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYL 183
           LQ+ L+P  P+F+K+MVRSHVS CFWLGLP+ FCK HLP  +  M L DE G E+  +Y+
Sbjct: 130 LQNSLDPENPSFVKTMVRSHVSSCFWLGLPTRFCKLHLPPKEYKMVLEDEEGGEFDSVYI 189

Query: 184 ARKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGD 222
             +TG SGGW+GF++ H L DGD+++F+L +P   K+YI +  D
Sbjct: 190 GNRTGLSGGWRGFAMHHNLEDGDSLVFELAEPDRFKIYIIKAVD 231

[Close]

BLAST of CmoCh12G004690 vs. ExPASy TrEMBL
Match: A0A6J1GGS5 (B3 domain-containing protein At5g42700-like OS=Cucurbita moschata OX=3662 GN=LOC111454086 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQL 60
           MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQL
Sbjct: 1   MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQL 60

Query: 61  VVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 120
           VVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS
Sbjct: 61  VVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 120

Query: 121 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 180
           VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK
Sbjct: 121 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 180

Query: 181 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS 232
           TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS
Sbjct: 181 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS 231

[Close]

BLAST of CmoCh12G004690 vs. ExPASy TrEMBL
Match: A0A6J1KU01 (B3 domain-containing protein At5g42700-like OS=Cucurbita maxima OX=3661 GN=LOC111496398 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 7.6e-124
Identity = 225/233 (96.57%), Postives = 229/233 (98.28%), Query Frame = 0


Query: 1   MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSP--SKSKSSPSKQAKHREMKK 60
           MG+ANLSYEECRRKRVEENKKRMDALNLPLLSQAL+DSSP  SKSKSSPSKQAKHREMKK
Sbjct: 1   MGVANLSYEECRRKRVEENKKRMDALNLPLLSQALLDSSPSKSKSKSSPSKQAKHREMKK 60

Query: 61  QLVVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERL 120
           QLVVVRRSSRV KQPGPVYAEVLVNRVA PKRFSSARDYPDHFFASDEARKNAFERAERL
Sbjct: 61  QLVVVRRSSRVTKQPGPVYAEVLVNRVAFPKRFSSARDYPDHFFASDEARKNAFERAERL 120

Query: 121 QSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLA 180
           QSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTL+DEGGDEYPIIYLA
Sbjct: 121 QSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLIDEGGDEYPIIYLA 180

Query: 181 RKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS 232
           RKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDS+SS
Sbjct: 181 RKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSNSS 233

[Close]

BLAST of CmoCh12G004690 vs. ExPASy TrEMBL
Match: A0A6J1CRA6 (B3 domain-containing protein At5g42700-like OS=Momordica charantia OX=3673 GN=LOC111014028 PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 8.4e-99
Identity = 184/231 (79.65%), Postives = 203/231 (87.88%), Query Frame = 0


Query: 1   MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQL 60
           MG+ANLSYEECRRKR+EENKKRM+ALNLPLLSQAL+DSSP  SKSSPSK  K R  +KQL
Sbjct: 1   MGVANLSYEECRRKRLEENKKRMEALNLPLLSQALLDSSP--SKSSPSKLGKPRVTQKQL 60

Query: 61  VVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 120
           VVVRRSSRVAKQ  PVYAEVL+NRV IP+R S ARD+ + F+ASDEARKNAFERAE+LQS
Sbjct: 61  VVVRRSSRVAKQSAPVYAEVLINRVVIPRRTSRARDFSNQFYASDEARKNAFERAEQLQS 120

Query: 121 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 180
            LEPNYP+FIKSMVRSHVSGCFWLGLP+H CK  LP  DGVMTL+DE GDEYP IYLARK
Sbjct: 121 GLEPNYPSFIKSMVRSHVSGCFWLGLPAHVCKTILPNRDGVMTLIDEDGDEYPTIYLARK 180

Query: 181 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS 232
           TG SGGWKGFS+AHKL DGDAV+FQLI+PTTCKVYI R   S+EDSDS+SS
Sbjct: 181 TGLSGGWKGFSIAHKLGDGDAVVFQLIRPTTCKVYILRAHSSREDSDSNSS 229

[Close]

BLAST of CmoCh12G004690 vs. ExPASy TrEMBL
Match: A0A6J1CSY5 (B3 domain-containing protein At5g42700-like OS=Momordica charantia OX=3673 GN=LOC111013935 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 9.3e-98
Identity = 185/231 (80.09%), Postives = 202/231 (87.45%), Query Frame = 0


Query: 1   MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQL 60
           MGIANLSYEECRRKR+EENKKRM+ALNLPLLSQAL+DSSP  SKSSPSK AK R  +KQL
Sbjct: 1   MGIANLSYEECRRKRLEENKKRMEALNLPLLSQALLDSSP--SKSSPSKLAKPRVTQKQL 60

Query: 61  VVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 120
           VVVRRSSRVAKQ  PVYAEVLV RV IP+R S ARD  +  +ASDE+RKNAFERAE+LQS
Sbjct: 61  VVVRRSSRVAKQSAPVYAEVLVKRVVIPRRISKARDVSNRVYASDESRKNAFERAEKLQS 120

Query: 121 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 180
            LE N+PNFIKSM++SHVSG FWLGLPSHFCK HLP  DGVMTL+DE GDEYP +YLARK
Sbjct: 121 GLERNHPNFIKSMLQSHVSGGFWLGLPSHFCKMHLPNRDGVMTLIDEDGDEYPTVYLARK 180

Query: 181 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDSDSDSS 232
           TG SGGWKGFSVAHKLADGDAV+FQLIKPTTCKVYI R   S+EDSDS+SS
Sbjct: 181 TGLSGGWKGFSVAHKLADGDAVVFQLIKPTTCKVYILRANSSREDSDSNSS 229

[Close]

BLAST of CmoCh12G004690 vs. ExPASy TrEMBL
Match: A0A5A7V0M6 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00120 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.7e-97
Identity = 182/214 (85.05%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MGIANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQL 60
           MGI+NLSYEECR+KRVEENKKRM+ALNLPLLSQAL+DSSP  SKSSPSKQ K R M+KQL
Sbjct: 1   MGISNLSYEECRQKRVEENKKRMEALNLPLLSQALLDSSP--SKSSPSKQVKPRVMQKQL 60

Query: 61  VVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 120
           VVVRRSSRVAKQP PVYAEVLV+RVAIP+RFS ARD+ D F+ASDEARK AFERA  LQS
Sbjct: 61  VVVRRSSRVAKQPTPVYAEVLVDRVAIPRRFSRARDFSDQFYASDEARKKAFERALELQS 120

Query: 121 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 180
            LEPNYP+ IKSMVRSHVSGCFWLGLPSHFCK HLP NDGVMTL+DE GDEYPIIYLARK
Sbjct: 121 RLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARK 180

Query: 181 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKV 215
           TGFSGGWKGFS+AHKLADGDAV+FQ IKPT CKV
Sbjct: 181 TGFSGGWKGFSIAHKLADGDAVVFQHIKPTACKV 212

[Close]

BLAST of CmoCh12G004690 vs. TAIR 10
Match: AT3G19184.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 206.1 bits (523), Expect = 3.1e-53
Identity = 122/230 (53.04%), Postives = 150/230 (65.22%), Query Frame = 0


Query: 4   ANLSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMK--KQLV 63
           + LSYE+ R  RVEENKKRM  LNL  L+Q+L  SS S S S PS  AK R M+      
Sbjct: 4   SELSYEQIRLNRVEENKKRMGELNLNKLAQSLRVSSSSSSSSKPS-PAKPRTMRIPVDFS 63

Query: 64  VVRRSSRVAKQPGPVYAEV-LVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQS 123
            VRRSSR AK P P Y E  L      P+R S  RD  +  +ASD+AR  AF+RAE+LQS
Sbjct: 64  EVRRSSR-AKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQS 123

Query: 124 VLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARK 183
            L+  Y +F K M++SHV+G FWLGLP  FCK H+P  D +MTL+DE  +E    YLA+K
Sbjct: 124 SLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQK 183

Query: 184 TGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVG-DSKEDSDSD 230
            G SGGW+GF++ H+L DGDAV+F LI  TT KVYI RV  D+  DSD +
Sbjct: 184 NGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIRVNDDANNDSDGN 231

[Close]

BLAST of CmoCh12G004690 vs. TAIR 10
Match: AT5G42700.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 194.9 bits (494), Expect = 7.2e-50
Identity = 110/223 (49.33%), Postives = 138/223 (61.88%), Query Frame = 0


Query: 8   YEECRRKRVEENKKRMDALNLPLLSQAL----IDSSPSKSKSSPSKQAKHREMKKQLVVV 67
           YEE R KRVEENKKRM+ALNLP LSQ L    +  SP K +S P      R  +K++V V
Sbjct: 9   YEEFRLKRVEENKKRMEALNLPKLSQILNSTSVKISPMKKRSIP------RTPEKKMVDV 68

Query: 68  RRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERAERLQSVLE 127
           +R              V + R  + K+    RD  +  + S+E R  A  RA + Q  L 
Sbjct: 69  KR--------------VHIQRRGVGKK----RDLLNRVYVSEEIRDEAISRANKFQDELG 128

Query: 128 PNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARKTGF 187
             YP+F+KSM++SHVSG FWLGLP  FCK HL  +DGV+TL+DE G+EY  IYLARK G 
Sbjct: 129 SGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGL 188

Query: 188 SGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFRVGDSKEDS 227
           SGGW GF+VAH LA GD ++F+L++ T  KVYI RVG   E S
Sbjct: 189 SGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITRVGSCGESS 207

[Close]

BLAST of CmoCh12G004690 vs. TAIR 10
Match: AT5G58280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 145.6 bits (366), Expect = 5.0e-35
Identity = 83/226 (36.73%), Postives = 126/226 (55.75%), Query Frame = 0


Query: 6   LSYEECRRKRVEENKKRMDALNLPLLSQALIDSSPSKSKSSPSKQAKHREMKKQLVVV-- 65
           ++YEE R+ R++EN KR  +  + L    L+            +Q  H+ + K L+    
Sbjct: 3   MAYEEARKLRLQENHKRFQSNFVALPQFQLL------------QQRNHKPIDKALLATAE 62

Query: 66  -RRSSRVAKQPGPVYAEVLVN--RVAIPKRFSSARDYPDHF--------FASDEARKNAF 125
            RRSSRV         +V+V+  R +  +R   +  +  +         FAS E +  AF
Sbjct: 63  PRRSSRVRTVISSYRDDVVVDTGRTSNLRRSRHSSTWATYISRPLHECKFASYEEKVGAF 122

Query: 126 ERAERLQSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEY 185
           + AE+ Q  L+  +P F+KSMVRSHV  CFWLGLPS FC ++ P     + L DE G+ Y
Sbjct: 123 KAAEKFQRSLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIELEDEEGEVY 182

Query: 186 PIIYLARKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCKVYIFR 219
             +Y+ R+ G SGGWK F++ HKL DGDA++F+L++P   K+Y+F+
Sbjct: 183 EAVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKFKIYVFK 216

[Close]

BLAST of CmoCh12G004690 vs. TAIR 10
Match: AT4G31620.1 (Transcriptional factor B3 family protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 37/114 (32.46%), Postives = 50/114 (43.86%), Query Frame = 0


Query: 125 NYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPIIYLARKTG-- 184
           N P F++S+   H S    L +P  F   HL    G +T +    D    I+  R  G  
Sbjct: 12  NRPFFVRSLA-GHTSN---LIIPDEFFTAHLEGKTG-LTKLKLTSDASDRIWDVRLNGRR 71

Query: 185 FSGGWKGFSVAHKLADGDAVIFQL-------IKPTTCKVYIFRVGDSKEDSDSD 230
           F+GGW  FS AH L D D ++F+L       + P+       R   S  D DSD
Sbjct: 72  FAGGWDDFSAAHCLRDDDVLVFRLDVKMVFHVTPSGRSFSQIRTSSSSGDYDSD 120

The following BLAST results are available for this feature:

BLAST of CmoCh12G004690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3M3	4.4e-52	53.04	B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9FMZ4	1.0e-48	49.33	B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana OX=3702 GN=At5g42...	[more]
Q10QS9	3.1e-42	44.54	B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q69V36	2.7e-41	42.98	B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q5KQI4	2.9e-40	40.63	B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CmoCh12G004690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGS5	1.1e-127	100.00	B3 domain-containing protein At5g42700-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KU01	7.6e-124	96.57	B3 domain-containing protein At5g42700-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1CRA6	8.4e-99	79.65	B3 domain-containing protein At5g42700-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CSY5	9.3e-98	80.09	B3 domain-containing protein At5g42700-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7V0M6	2.7e-97	85.05	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of CmoCh12G004690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19184.1	3.1e-53	53.04	AP2/B3-like transcriptional factor family protein	[more]
AT5G42700.1	7.2e-50	49.33	AP2/B3-like transcriptional factor family protein	[more]
AT5G58280.1	5.0e-35	36.73	AP2/B3-like transcriptional factor family protein	[more]
AT4G31620.1	3.7e-06	32.46	Transcriptional factor B3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 129..220 e-value: 4.3E-23 score: 92.7
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 129..218 e-value: 1.8E-14 score: 53.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 129..220 score: 11.631567
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 127..218 e-value: 1.70459E-25 score: 93.9316
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 103..221 e-value: 2.9E-25 score: 90.4
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 122..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..58
None	No IPR available	PANTHER	PTHR31391:SF4	B3 DOMAIN-CONTAINING PROTEIN OS03G0184500	coord: 5..223
IPR044837	B3 domain-containing protein REM16-like	PANTHER	PTHR31391	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	coord: 5..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G004690.1	CmoCh12G004690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding