CmoCh12G004510 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G004510
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Dof zinc finger protein
Location	Cmo_Chr12: 2765105 .. 2765800 (+)
RNA-Seq Expression	CmoCh12G004510
Synteny	CmoCh12G004510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGTCGGAATCAGCCAATCCTAACAGAACCAACCGCCCCCAACACACCATGCCCTTCCCTCCCCCGCCCCAATCCGACCCACGCCCCTGCCCACGCTGCGACTCACTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACGTTCCTGTCGGCGGCGGCTCACGCAAAAACTCCAAACGCTCACGTTATCACAACGCCCCCTCCTCTGCTTCCTCCTCTTCCTCCTCTGTTTCTCTTCTTCCTCCCACCGCCGCCGTCACTAACGACATTAACGTCAATCTCAACGACACCATGTCCGGTCCTGCCACTTTCACATCTCTCTTGAGCTCCCAAGGATCCGGGTTTTTGGCTCTTGGTGGATACGGGTCTGGATCCGGGTCGGCTCATGCCCCTGCAGCTTTTGACGAAATGGGGTTCGGCTTAGGCAGGGGATTATGGGATACCGCTTGTACTTACACTGAAGTTGGGGATCTCGTCGGAGCTCCGGAGACGTCGTCGTCTGGATACAACACGTGGCAGATGAATGACACGAATGGCGACGGCGCTGGCGGCGGAGTTGTCGACGGCGATTTGCTGAATTGGCCGGACCTTGCCATTTCCATGCAAGGCAAGAGCTTGAAGTAA

mRNA sequence

ATGCCGTCGGAATCAGCCAATCCTAACAGAACCAACCGCCCCCAACACACCATGCCCTTCCCTCCCCCGCCCCAATCCGACCCACGCCCCTGCCCACGCTGCGACTCACTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACGTTCCTGTCGGCGGCGGCTCACGCAAAAACTCCAAACGCTCACGTTATCACAACGCCCCCTCCTCTGCTTCCTCCTCTTCCTCCTCTGTTTCTCTTCTTCCTCCCACCGCCGCCGTCACTAACGACATTAACGTCAATCTCAACGACACCATGTCCGGTCCTGCCACTTTCACATCTCTCTTGAGCTCCCAAGGATCCGGGTTTTTGGCTCTTGGTGGATACGGGTCTGGATCCGGGTCGGCTCATGCCCCTGCAGCTTTTGACGAAATGGGGTTCGGCTTAGGCAGGGGATTATGGGATACCGCTTGTACTTACACTGAAGTTGGGGATCTCGTCGGAGCTCCGGAGACGTCGTCGTCTGGATACAACACGTGGCAGATGAATGACACGAATGGCGACGGCGCTGGCGGCGGAGTTGTCGACGGCGATTTGCTGAATTGGCCGGACCTTGCCATTTCCATGCAAGGCAAGAGCTTGAAGTAA

Coding sequence (CDS)

ATGCCGTCGGAATCAGCCAATCCTAACAGAACCAACCGCCCCCAACACACCATGCCCTTCCCTCCCCCGCCCCAATCCGACCCACGCCCCTGCCCACGCTGCGACTCACTCAACACCAAATTCTGCTACTACAACAACTACAACCTCTCTCAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGACGTTCCTGTCGGCGGCGGCTCACGCAAAAACTCCAAACGCTCACGTTATCACAACGCCCCCTCCTCTGCTTCCTCCTCTTCCTCCTCTGTTTCTCTTCTTCCTCCCACCGCCGCCGTCACTAACGACATTAACGTCAATCTCAACGACACCATGTCCGGTCCTGCCACTTTCACATCTCTCTTGAGCTCCCAAGGATCCGGGTTTTTGGCTCTTGGTGGATACGGGTCTGGATCCGGGTCGGCTCATGCCCCTGCAGCTTTTGACGAAATGGGGTTCGGCTTAGGCAGGGGATTATGGGATACCGCTTGTACTTACACTGAAGTTGGGGATCTCGTCGGAGCTCCGGAGACGTCGTCGTCTGGATACAACACGTGGCAGATGAATGACACGAATGGCGACGGCGCTGGCGGCGGAGTTGTCGACGGCGATTTGCTGAATTGGCCGGACCTTGCCATTTCCATGCAAGGCAAGAGCTTGAAGTAA

Protein sequence

MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLNDTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK

Homology

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BLAST of CmoCh12G004510 vs. ExPASy Swiss-Prot
Match: Q39088 (Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 1.0e-40
Identity = 111/260 (42.69%), Postives = 150/260 (57.69%), Query Frame = 0


Query: 3   SESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRY 62
           S+S  P R     + +  P   Q +  PCPRCDS NTKFCYYNNYN SQPRHFCK+CRRY
Sbjct: 4   SDSGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRY 63

Query: 63  WTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSAS-----SSSSSVSL-----LPPTAAVTN 122
           WTHGGTLRDVPVGGG+RK++KRSR  +  SS+S     S+S+ V L     L P ++++N
Sbjct: 64  WTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISN 123

Query: 123 DINVNLNDT------MSGPATFTSLL--------SSQGSG-FLALGGYGSGSGSAHAPAA 182
            +   + ++      +S   +FTS L        ++ GSG  + +GG+G G GS      
Sbjct: 124 GVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGS-----G 183

Query: 183 FDEMGFGLGRGLWDTACTYTEVGDLVGAPETSSSGYN------TWQMNDTNGDGAGGGVV 232
           FD++ FGLGR +W     ++ VG        S+ G++      TWQ      + AGGG V
Sbjct: 184 FDDVSFGLGRAMW----PFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESN-AGGGFV 243

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BLAST of CmoCh12G004510 vs. ExPASy Swiss-Prot
Match: Q9SX97 (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-37
Identity = 99/234 (42.31%), Postives = 130/234 (55.56%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSE      T     T  +PPP  ++P PCPRC+S  TKFCYYNNYNL+QPR++CKSCR
Sbjct: 1   MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTA---AVTNDINVN 120
           RYWT GGTLRDVPVGGG+R++S + R+ +  ++A+SSSSS S++  T    A T      
Sbjct: 61  RYWTQGGTLRDVPVGGGTRRSSSK-RHRSFSTTATSSSSSSSVITTTTQEPATTEASQTK 120

Query: 121 LNDTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYT 180
           + + +SG  +F SLL           G GSG+G         + GFG G GL + +  Y 
Sbjct: 121 VTNLISGHGSFASLL-----------GLGSGNGGL-------DYGFGYGYGLEEMSIGYL 180

Query: 181 EVGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232
               +   P     G +TWQ+ +  G         GD L WP L ISMQ   +K
Sbjct: 181 GDSSVGEIPVVDGCGGDTWQIGEIEGKSG------GDSLIWPGLEISMQTNDVK 209

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BLAST of CmoCh12G004510 vs. ExPASy Swiss-Prot
Match: Q8L9V6 (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-26
Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 71  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPTA 109
           K+ +  N  SS+SSS  SSSV+   P++
Sbjct: 131 KKGKNGNLKSSSSSSKQSSSVNAQSPSS 158

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BLAST of CmoCh12G004510 vs. ExPASy Swiss-Prot
Match: Q9FGD6 (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.8e-25
Identity = 87/238 (36.55%), Postives = 117/238 (49.16%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFP---PPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCK 60
           MPSE +   R  +  H        P  Q +   CPRC+S NTKFCYYNNYN SQPRHFCK
Sbjct: 1   MPSEFSESRRVPKIPHGQGGSVAIPTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCK 60

Query: 61  SCRRYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSS------SVSLLPPTAAVT 120
           SCRRYWTHGGTLRD+PVGG SRK+SKRSR +++ ++ S   S      +  +L P ++  
Sbjct: 61  SCRRYWTHGGTLRDIPVGGVSRKSSKRSRTYSSAATTSVVGSRNFPLQATPVLFPQSSSN 120

Query: 121 NDINVNLNDTMSGPATFTSLL--------SSQGSGFLALGGYGSGSGSAHAPAAFDEMGF 180
             I        S    F+SL+        +  G GF     +G G G     + ++++ +
Sbjct: 121 GGITTAKGSASSFYGGFSSLINYNAAVSRNGPGGGFNGPDAFGLGLGHG---SYYEDVRY 180

Query: 181 GLGRGLW-------DTACTYTEVGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGD 215
           G G  +W       D A T + +  +            TWQ     G  +  G V GD
Sbjct: 181 GQGITVWPFSSGATDAATTTSHIAQIPA----------TWQF---EGQESKVGFVSGD 222

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BLAST of CmoCh12G004510 vs. ExPASy Swiss-Prot
Match: Q9FM03 (Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-24
Identity = 70/143 (48.95%), Postives = 88/143 (61.54%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP   P+ CPRC+S +TKFCYYNNY+LSQPR+FCK+CRRYWT GGTLR++PVGGG RKN 
Sbjct: 67  PPHDHPQKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNK 126

Query: 83  KRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLNDTMSGPATFTSLLSSQGSGFLAL 142
           K       PSS++SSSS+ S   P    +N +  N +D M+   +  +   S   GF   
Sbjct: 127 K-------PSSSNSSSSTSSGKKP----SNIVTANTSDLMALAHSHQNYQHSP-LGFSHF 186

Query: 143 GG-YGSGSGSAHAPAAFDEMGFG 165
           GG  GS S   H    F E  +G
Sbjct: 187 GGMMGSYSTPEHGNVGFLESKYG 197

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BLAST of CmoCh12G004510 vs. ExPASy TrEMBL
Match: A0A6J1GJZ2 (dof zinc finger protein DOF1.6-like OS=Cucurbita moschata OX=3662 GN=LOC111454557 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 7.8e-129
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLND 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLND
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTAAVTNDINVNLND 120

Query: 121 TMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVG 180
           TMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVG
Sbjct: 121 TMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEVG 180

Query: 181 DLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232
           DLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 DLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 231

[Close]

BLAST of CmoCh12G004510 vs. ExPASy TrEMBL
Match: A0A6J1KP87 (dof zinc finger protein DOF1.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496024 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.8e-126
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR
Sbjct: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPP-TAAVTNDINVNLN 120
           RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPP  AAVTNDINVNLN
Sbjct: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPAAAAVTNDINVNLN 120

Query: 121 DTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180
           DTMSGPATFTSLLSSQG GFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV
Sbjct: 121 DTMSGPATFTSLLSSQGPGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYTEV 180

Query: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232
           GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK
Sbjct: 181 GDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232

[Close]

BLAST of CmoCh12G004510 vs. ExPASy TrEMBL
Match: A0A5A7VDC0 (Dof zinc finger protein DOF1.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006160 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94
Identity = 193/254 (75.98%), Postives = 201/254 (79.13%), Query Frame = 0


Query: 1   MPSESANPNRTN-RPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60
           MPSES+N N +  +PQHTM FPPPPQSDP PCPRCDSLNTKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYH---NAPSSAS-------------SSSSSVSL 120
           RRYWTHGGTLRDVPVGGGSRKNSKRSRYH   N PSS S             SSSSSVSL
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 LPPTAAVTNDINVNLNDTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGF 180
           LP   A+ NDI    NDT+  P TFTSLLSSQ SGFLALGGY SGSGS HAPAAFD+MGF
Sbjct: 121 LPTANALNNDI----NDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMGF 180

Query: 181 GLGRGLWDTACTYTEVGDLV------GAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLN 232
            LGRGLW TAC Y EVGDLV      GAPETSSSGYNTWQMN T+G G  GGVVDGDLL 
Sbjct: 181 ALGRGLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDG-GGNGGVVDGDLLG 240

[Close]

BLAST of CmoCh12G004510 vs. ExPASy TrEMBL
Match: A0A1S3BAC9 (dof zinc finger protein DOF1.6-like OS=Cucumis melo OX=3656 GN=LOC103487930 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94
Identity = 193/254 (75.98%), Postives = 201/254 (79.13%), Query Frame = 0


Query: 1   MPSESANPNRTN-RPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60
           MPSES+N N +  +PQHTM FPPPPQSDP PCPRCDSLNTKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYH---NAPSSAS-------------SSSSSVSL 120
           RRYWTHGGTLRDVPVGGGSRKNSKRSRYH   N PSS S             SSSSSVSL
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 LPPTAAVTNDINVNLNDTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGF 180
           LP   A+ NDI    NDT+  P TFTSLLSSQ SGFLALGGY SGSGS HAPAAFD+MGF
Sbjct: 121 LPTANALNNDI----NDTIPPPGTFTSLLSSQASGFLALGGYTSGSGSGHAPAAFDDMGF 180

Query: 181 GLGRGLWDTACTYTEVGDLV------GAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLN 232
            LGRGLW TAC Y EVGDLV      GAPETSSSGYNTWQMN T+G G  GGVVDGDLL 
Sbjct: 181 ALGRGLWGTACPYPEVGDLVGSYAAGGAPETSSSGYNTWQMNATDG-GGNGGVVDGDLLG 240

[Close]

BLAST of CmoCh12G004510 vs. ExPASy TrEMBL
Match: A0A0A0LKY9 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360720 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.4e-93
Identity = 190/254 (74.80%), Postives = 200/254 (78.74%), Query Frame = 0


Query: 1   MPSESANPNRTN-RPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60
           MPSES+N N +  +PQHTM FPPPPQSDP PCPRCDSLNTKFCYYNNYNLSQPRHFCKSC
Sbjct: 1   MPSESSNRNNSRPQPQHTMGFPPPPQSDPLPCPRCDSLNTKFCYYNNYNLSQPRHFCKSC 60

Query: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYH---NAPSSAS-------------SSSSSVSL 120
           RRYWTHGGTLRDVPVGGGSRKNSKRSRYH   N PSS S             SSSSSVSL
Sbjct: 61  RRYWTHGGTLRDVPVGGGSRKNSKRSRYHNINNTPSSVSASSSTSVSSSTSASSSSSVSL 120

Query: 121 LPPTAAVTNDINVNLNDTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGF 180
           LP      N +N ++NDT+  P TFTSLLSSQ SGFLALGGY SGSGS HAPAAFD+MGF
Sbjct: 121 LP----TANALNSDINDTIPAPGTFTSLLSSQASGFLALGGYASGSGSGHAPAAFDDMGF 180

Query: 181 GLGRGLWDTACTYTEVGDLV------GAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLN 232
            LGRGLW TAC Y EVGDLV      GAPETSSSGYNTWQMN  +G G  GGVVDGDLL 
Sbjct: 181 ALGRGLWGTACPYPEVGDLVGSYATGGAPETSSSGYNTWQMNANDG-GGNGGVVDGDLLG 240

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BLAST of CmoCh12G004510 vs. TAIR 10
Match: AT3G50410.1 (OBF binding protein 1 )

HSP 1 Score: 168.3 bits (425), Expect = 7.2e-42
Identity = 111/260 (42.69%), Postives = 150/260 (57.69%), Query Frame = 0


Query: 3   SESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRY 62
           S+S  P R     + +  P   Q +  PCPRCDS NTKFCYYNNYN SQPRHFCK+CRRY
Sbjct: 4   SDSGEPRRIAMKPNGVTVPISDQQEQLPCPRCDSSNTKFCYYNNYNFSQPRHFCKACRRY 63

Query: 63  WTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSAS-----SSSSSVSL-----LPPTAAVTN 122
           WTHGGTLRDVPVGGG+RK++KRSR  +  SS+S     S+S+ V L     L P ++++N
Sbjct: 64  WTHGGTLRDVPVGGGTRKSAKRSRTCSNSSSSSVSGVVSNSNGVPLQTTPVLFPQSSISN 123

Query: 123 DINVNLNDT------MSGPATFTSLL--------SSQGSG-FLALGGYGSGSGSAHAPAA 182
            +   + ++      +S   +FTS L        ++ GSG  + +GG+G G GS      
Sbjct: 124 GVTHTVTESDGKGSALSLCGSFTSTLLNHNAAATATHGSGSVIGIGGFGIGLGS-----G 183

Query: 183 FDEMGFGLGRGLWDTACTYTEVGDLVGAPETSSSGYN------TWQMNDTNGDGAGGGVV 232
           FD++ FGLGR +W     ++ VG        S+ G++      TWQ      + AGGG V
Sbjct: 184 FDDVSFGLGRAMW----PFSTVGTATTTNVGSNGGHHAVPMPATWQFEGLESN-AGGGFV 243

[Close]

BLAST of CmoCh12G004510 vs. TAIR 10
Match: AT1G47655.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 158.3 bits (399), Expect = 7.4e-39
Identity = 99/234 (42.31%), Postives = 130/234 (55.56%), Query Frame = 0


Query: 1   MPSESANPNRTNRPQHTMPFPPPPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCR 60
           MPSE      T     T  +PPP  ++P PCPRC+S  TKFCYYNNYNL+QPR++CKSCR
Sbjct: 1   MPSEPNQTRPTRVQPSTAAYPPPNLAEPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCR 60

Query: 61  RYWTHGGTLRDVPVGGGSRKNSKRSRYHNAPSSASSSSSSVSLLPPTA---AVTNDINVN 120
           RYWT GGTLRDVPVGGG+R++S + R+ +  ++A+SSSSS S++  T    A T      
Sbjct: 61  RYWTQGGTLRDVPVGGGTRRSSSK-RHRSFSTTATSSSSSSSVITTTTQEPATTEASQTK 120

Query: 121 LNDTMSGPATFTSLLSSQGSGFLALGGYGSGSGSAHAPAAFDEMGFGLGRGLWDTACTYT 180
           + + +SG  +F SLL           G GSG+G         + GFG G GL + +  Y 
Sbjct: 121 VTNLISGHGSFASLL-----------GLGSGNGGL-------DYGFGYGYGLEEMSIGYL 180

Query: 181 EVGDLVGAPETSSSGYNTWQMNDTNGDGAGGGVVDGDLLNWPDLAISMQGKSLK 232
               +   P     G +TWQ+ +  G         GD L WP L ISMQ   +K
Sbjct: 181 GDSSVGEIPVVDGCGGDTWQIGEIEGKSG------GDSLIWPGLEISMQTNDVK 209

[Close]

BLAST of CmoCh12G004510 vs. TAIR 10
Match: AT1G07640.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 71  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 130

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPTA 109
           K+ +  N  SS+SSS  SSSV+   P++
Sbjct: 131 KKGKNGNLKSSSSSSKQSSSVNAQSPSS 158

[Close]

BLAST of CmoCh12G004510 vs. TAIR 10
Match: AT1G07640.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 15  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 74

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPTA 109
           K+ +  N  SS+SSS  SSSV+   P++
Sbjct: 75  KKGKNGNLKSSSSSSKQSSSVNAQSPSS 102

[Close]

BLAST of CmoCh12G004510 vs. TAIR 10
Match: AT1G07640.3 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.2 bits (300), Expect = 2.2e-27
Identity = 58/88 (65.91%), Postives = 69/88 (78.41%), Query Frame = 0


Query: 23  PPQSDPRPCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTHGGTLRDVPVGGGSRKNS 82
           PP + P  CPRCDS NTKFCYYNNYNL+QPRHFCK CRRYWT GG LR+VPVGGG R+N+
Sbjct: 79  PPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNN 138

Query: 83  KRSRYHNAPSSASSS--SSSVSLLPPTA 109
           K+ +  N  SS+SSS  SSSV+   P++
Sbjct: 139 KKGKNGNLKSSSSSSKQSSSVNAQSPSS 166

The following BLAST results are available for this feature:

BLAST of CmoCh12G004510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39088	1.0e-40	42.69	Dof zinc finger protein DOF3.4 OS=Arabidopsis thaliana OX=3702 GN=DOF3.4 PE=1 SV...	[more]
Q9SX97	1.0e-37	42.31	Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana OX=3702 GN=DOF1.6 PE=2 SV...	[more]
Q8L9V6	3.2e-26	65.91	Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV...	[more]
Q9FGD6	7.8e-25	36.55	Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana OX=3702 GN=DOF5.8 PE=2 SV...	[more]
Q9FM03	2.3e-24	48.95	Dof zinc finger protein DOF5.6 OS=Arabidopsis thaliana OX=3702 GN=DOF5.6 PE=2 SV...	[more]

BLAST of CmoCh12G004510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJZ2	7.8e-129	100.00	dof zinc finger protein DOF1.6-like OS=Cucurbita moschata OX=3662 GN=LOC11145455...	[more]
A0A6J1KP87	2.8e-126	98.71	dof zinc finger protein DOF1.6-like OS=Cucurbita maxima OX=3661 GN=LOC111496024 ...	[more]
A0A5A7VDC0	3.7e-94	75.98	Dof zinc finger protein DOF1.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3BAC9	3.7e-94	75.98	dof zinc finger protein DOF1.6-like OS=Cucumis melo OX=3656 GN=LOC103487930 PE=4...	[more]
A0A0A0LKY9	1.4e-93	74.80	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G360720 PE...	[more]

BLAST of CmoCh12G004510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50410.1	7.2e-42	42.69	OBF binding protein 1	[more]
AT1G47655.1	7.4e-39	42.31	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.2	2.2e-27	65.91	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.1	2.2e-27	65.91	Dof-type zinc finger DNA-binding family protein	[more]
AT1G07640.3	2.2e-27	65.91	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 28..83 e-value: 4.3E-33 score: 113.3
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 31..67
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 29..83 score: 29.180101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..104
None	No IPR available	PANTHER	PTHR31992:SF189	SUBFAMILY NOT NAMED	coord: 1..226
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G004510.1	CmoCh12G004510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004672	protein kinase activity