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CmoCh12G004420 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGCGGATTCGGGGAATCAACAAGTAGGCAACCTCAAAGCCCTTCGTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGTAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGTGGTCATCTTTTTTGTTGGCCATGCCTTTACAAGTGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGTAAAGCTATGATAGAAGAGCAAAAATTGGTTCCCTTATATGGTAGGGGAAAGACGTCGACTGACCCGAGGTCGAAAAGTATTCCGGGAGTTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGCCCTCCCCCAGAGCCAAATCCTTTTGCTCACAATGGATTTGGATTCATGGGAGGTCTTGGAGGGTTTGCTCCAATGGCATCAACAAGGTTTGGTAATTTCACATTGTCTGCGGCTTTTGGTGGTCTTGTCCCATCTTTGTTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCATATGGGTTTCCTAACATGTTTCATGGTAGCCATGGCCATGGCCATGCTCATGCTCATGGATACTATCACCATCTCCGTCAAGGTCAGCAAGATTACTACCTGAAGCGGCTGCTTTTTTTTATTGGTTTCTGTGTTCTTCTTGCCCTAATCTGGCAATAGATCAAAGGGTCCATTAGGGCATATATTATTGCTTTGTGGTGTTTAGTGTATTCAATCTCTAATGTAAGAATTATAGAAGTGAAAAAAATCCGATGGTACATTGTCTTGCTGTCTCATCATTATTGAAATGAACATCTACTTTTGTATACTTAGCACGATGAACGTTAGCTGACGTGCTTATGCAATTGTATTCGAAGGTTTCAATTTATTCACATCTATATATACTACATTGACATGCTGACCCACCAAATGCAATCACTTGGCTGAGTGAATGAAACACGTGCTGTGATGGCTCGTTCTCTCGAAAGATGATTTATTTGCCTAAGTGATTTCTCTAGTGCTCTTACTTTATGCACTACTTGTGATATGTGTTTCCTGTTTTTTGGTGAAGAAGTTCAGAATATACAGATGGGTTTCTGCTGCACATGGTACTACCAGAAACTTGTTCATCAGATTTTGTTTAGCTATGGTTCTATCCATGTTCATTATTTCAATTCTATCTCAGTATTTGTTTCGTTTTCTCAAGTCTTCGATTCCAGTTTGGTTTATTTTTGAACTTCAGTCTTGCACTAGGTTCGTGAAATACGTCGTTCTGATCGAAGAGCAGGGCAAGGATCAGGATCATCACCCCTTGATACCATGTTGGGAACTAGTAGGTCAGTGATTGTGGCTTTCAAGATATTTTTTGTTTGATTTATAGGGAATGACCTAACAGAAGCAGGTGATCTTTAAGCTGGATGGTACTTGACCATGTTTATCAGAAGAATGCAGAGAAAAAGGGTAGGTGCTTGCTATTGATGTTAGATATCAGCTGAACTTATAATATAGTGATGTCGCTCGTAGTGTTCAATTGGCAAAGGTTTGCATTTAGGTGCCTTGGAGAAGAACGTTCTTTGTTTGAGTTTGAAGTCGTTACCTTGTAGGAGCTACGTGAGTGAGACCCTTCTCTCCGTTTTTTTTTCTTATTTCCATATGGTGTGAATCACTTTAACTTCACCCGTCACTCGTGTCGTGTAGTTTTAGCAAGACTAACAAGTGGTCAACTGAATTTATGAACGGGTAACTATTTCTTCGTTGCAATACCTTTCTCTTTTCTTATTCTTCCTCTACTCACCACCATGGACGAATGGAATCTAATACACTCTTTCTTGGCAAGTGTAGCAGACTCCATGAGAGGTCATTCGGAAGGACTCCGAATAGTTCGATTTTGGGGTATGGTAGTTGACGCGCTACGGGTTATTTATTTTTAGCTGTTGGTTGGTTATTGTTCATCTTTTTGAAGACCAGACAATATGGAACTTGCTGAGGATGCCCCTTTTCTATTAATTGTAACATCATACTTCTTAATTAAAATTTAATCTATGAAGAGCTCGTTGTTGTTGTTGGAATATTTTCTGAAACCCCATTTGAAAGCTAAAGCTACTCACCACCGGCCGGTCACCATCTCTCTCATTCTCACCATACACATAAAAACCCATCTCTTACCTTTCCTCCTTCCTCACTTCCTCTCGCCGGCCGCCGCCATGTTTAAACCTCGGGCCGCTCTTCTCTTCTTCATTTTCTCCTTAACTGCCGTCAATGCCACCGTTCTATTCAAGGAGGCACCCCAATTCTACAACTCCCCTGACTGCCCCTCTGTTTTCGAGGGTGAGGAAGATGGCCATCGTCTCTGCTCCGACGATGGCGTCCACGTTGCAATGACATTGGACACGGCTTACATCCGGGGCTCCATGGCGGCGATCCTCTCCGTTCTGCAACATTCACCCTGTCCCCAAAATGTAATCTTCCATTTTGTTTCCTCTGCTTCTGCAAATGCTCTGTCTCTCCACGCCACCATTTCCTCCTCCTTTCCTTATCTTAAATTCAAAATCTACCCCTTCGACGATGTCGCCGTGTCCCGTTTGATCTCCACCTCCATCCGCTCTGCCTTGGATTGTCCATTGAACTATGCTCGTAGCTACTTGGCTGACCTCCTCCCCCTCTGCGTTCGCCGTGTTGTCTATCTCGATTCCGATATAATCCTCGTCGACGACATCGCTAACCTCGCCAACACTCCTCTTAACGACGCCGTCCTCGCTGCCCCTGAGTACTGCAACGCCAATTTCACGGCCTATTTCACTCCCACTTTCTGGTCCAATCCCTCTCTATCTCTCACCTTCGCCAATCGCAACCCCTGTTACTTCAATACCGGTGTCATGGTCATCGATCTCTCCCGGTGGCGCCTCGGCGACTTCACCGCCGAAATCGAAGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTACGAGCTTGGATCTCTACCGCCATTCATGCTTGTTTTCGCTGGAAACATCGTCCCCGTCGACCACCGGTGGAACCAGCACGGCCTCGGCGGGGATAATTTCCGGGGACTCTGCCGGGATCTACACCCGGGTCCGGTGAGCCTGTTGCACTGGAGTGGAAAGGGGAAGCCATGGGCCCGGGTGGATGCGAACCGGCCGTGTCCGTTGGACTCTCTGTGGGTCCCTTATGATCTGTTGCAGACTCCATTTTCGTTGGATTCATGA ATGGCGAGCGGATTCGGGGAATCAACAAGTAGGCAACCTCAAAGCCCTTCGTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGTAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGTGGTCATCTTTTTTGTTGGCCATGCCTTTACAAGTGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGTAAAGCTATGATAGAAGAGCAAAAATTGGTTCCCTTATATGGTAGGGGAAAGACGTCGACTGACCCGAGGTCGAAAAGTATTCCGGGAGTTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGCCCTCCCCCAGAGCCAAATCCTTTTGCTCACAATGGATTTGGATTCATGGGAGGTCTTGGAGGGTTTGCTCCAATGGCATCAACAAGGTTTGGTAATTTCACATTGTCTGCGGCTTTTGGTGGTCTTGTCCCATCTTTGTTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCATATGGGTTTCCTAACATGTTTCATGGTAGCCATGGCCATGGCCATGCTCATGCTCATGGATACTATCACCATCTCCGTCAAGCTATGGTTCTATCCATGTTCATTATTTCAATTCTATCTCAGTATTTGTTTCGTTTTCTCAAGTCTTCGATTCCAGTTTGGTTTATTTTTGAACTTCAGTCTTGCACTAGGTTCGTGAAATACGTCGTTCTGATCGAAGAGCAGGGCAAGGATCAGGATCATCACCCCTTGATACCATGTTGGGAACTAAGCTCGTTGTTGTTGTTGGAATATTTTCTGAAACCCCATTTGAAAGCTAAAGCTACTCACCACCGGCCGGTCACCATCTCTCTCATTCTCACCATACACATAAAAACCCATCTCTTACCTTTCCTCCTTCCTCACTTCCTCTCGCCGGCCGCCGCCATGTTTAAACCTCGGGCCGCTCTTCTCTTCTTCATTTTCTCCTTAACTGCCGTCAATGCCACCGTTCTATTCAAGGAGGCACCCCAATTCTACAACTCCCCTGACTGCCCCTCTGTTTTCGAGGGTGAGGAAGATGGCCATCGTCTCTGCTCCGACGATGGCGTCCACGTTGCAATGACATTGGACACGGCTTACATCCGGGGCTCCATGGCGGCGATCCTCTCCGTTCTGCAACATTCACCCTGTCCCCAAAATGTAATCTTCCATTTTGTTTCCTCTGCTTCTGCAAATGCTCTGTCTCTCCACGCCACCATTTCCTCCTCCTTTCCTTATCTTAAATTCAAAATCTACCCCTTCGACGATGTCGCCGTGTCCCGTTTGATCTCCACCTCCATCCGCTCTGCCTTGGATTGTCCATTGAACTATGCTCGTAGCTACTTGGCTGACCTCCTCCCCCTCTGCGTTCGCCGTGTTGTCTATCTCGATTCCGATATAATCCTCGTCGACGACATCGCTAACCTCGCCAACACTCCTCTTAACGACGCCGTCCTCGCTGCCCCTGAGTACTGCAACGCCAATTTCACGGCCTATTTCACTCCCACTTTCTGGTCCAATCCCTCTCTATCTCTCACCTTCGCCAATCGCAACCCCTGTTACTTCAATACCGGTGTCATGGTCATCGATCTCTCCCGGTGGCGCCTCGGCGACTTCACCGCCGAAATCGAAGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTACGAGCTTGGATCTCTACCGCCATTCATGCTTGTTTTCGCTGGAAACATCGTCCCCGTCGACCACCGGTGGAACCAGCACGGCCTCGGCGGGGATAATTTCCGGGGACTCTGCCGGGATCTACACCCGGGTCCGGTGAGCCTGTTGCACTGGAGTGGAAAGGGGAAGCCATGGGCCCGGGTGGATGCGAACCGGCCGTGTCCGTTGGACTCTCTGTGGGTCCCTTATGATCTGTTGCAGACTCCATTTTCGTTGGATTCATGA ATGGCGAGCGGATTCGGGGAATCAACAAGTAGGCAACCTCAAAGCCCTTCGTGTTCCGACAACAATGGTGATGCTAGTAATTTTGAGTGTAATATTTGCCTGGATTTAGCTCAAGATCCTATTGTAACCCTATGTGGTCATCTTTTTTGTTGGCCATGCCTTTACAAGTGGCTGCACATTCATTCCCATCCCCAGGAATGTCCAGTTTGTAAAGCTATGATAGAAGAGCAAAAATTGGTTCCCTTATATGGTAGGGGAAAGACGTCGACTGACCCGAGGTCGAAAAGTATTCCGGGAGTTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGCCCTCCCCCAGAGCCAAATCCTTTTGCTCACAATGGATTTGGATTCATGGGAGGTCTTGGAGGGTTTGCTCCAATGGCATCAACAAGGTTTGGTAATTTCACATTGTCTGCGGCTTTTGGTGGTCTTGTCCCATCTTTGTTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCATATGGGTTTCCTAACATGTTTCATGGTAGCCATGGCCATGGCCATGCTCATGCTCATGGATACTATCACCATCTCCGTCAAGCTATGGTTCTATCCATGTTCATTATTTCAATTCTATCTCAGTATTTGTTTCGTTTTCTCAAGTCTTCGATTCCAGTTTGGTTTATTTTTGAACTTCAGTCTTGCACTAGGTTCGTGAAATACGTCGTTCTGATCGAAGAGCAGGGCAAGGATCAGGATCATCACCCCTTGATACCATGTTGGGAACTAAGCTCGTTGTTGTTGTTGGAATATTTTCTGAAACCCCATTTGAAAGCTAAAGCTACTCACCACCGGCCGGTCACCATCTCTCTCATTCTCACCATACACATAAAAACCCATCTCTTACCTTTCCTCCTTCCTCACTTCCTCTCGCCGGCCGCCGCCATGTTTAAACCTCGGGCCGCTCTTCTCTTCTTCATTTTCTCCTTAACTGCCGTCAATGCCACCGTTCTATTCAAGGAGGCACCCCAATTCTACAACTCCCCTGACTGCCCCTCTGTTTTCGAGGGTGAGGAAGATGGCCATCGTCTCTGCTCCGACGATGGCGTCCACGTTGCAATGACATTGGACACGGCTTACATCCGGGGCTCCATGGCGGCGATCCTCTCCGTTCTGCAACATTCACCCTGTCCCCAAAATGTAATCTTCCATTTTGTTTCCTCTGCTTCTGCAAATGCTCTGTCTCTCCACGCCACCATTTCCTCCTCCTTTCCTTATCTTAAATTCAAAATCTACCCCTTCGACGATGTCGCCGTGTCCCGTTTGATCTCCACCTCCATCCGCTCTGCCTTGGATTGTCCATTGAACTATGCTCGTAGCTACTTGGCTGACCTCCTCCCCCTCTGCGTTCGCCGTGTTGTCTATCTCGATTCCGATATAATCCTCGTCGACGACATCGCTAACCTCGCCAACACTCCTCTTAACGACGCCGTCCTCGCTGCCCCTGAGTACTGCAACGCCAATTTCACGGCCTATTTCACTCCCACTTTCTGGTCCAATCCCTCTCTATCTCTCACCTTCGCCAATCGCAACCCCTGTTACTTCAATACCGGTGTCATGGTCATCGATCTCTCCCGGTGGCGCCTCGGCGACTTCACCGCCGAAATCGAAGAATGGATGGAGCTTCAGAAGAGAATGAGGATCTACGAGCTTGGATCTCTACCGCCATTCATGCTTGTTTTCGCTGGAAACATCGTCCCCGTCGACCACCGGTGGAACCAGCACGGCCTCGGCGGGGATAATTTCCGGGGACTCTGCCGGGATCTACACCCGGGTCCGGTGAGCCTGTTGCACTGGAGTGGAAAGGGGAAGCCATGGGCCCGGGTGGATGCGAACCGGCCGTGTCCGTTGGACTCTCTGTGGGTCCCTTATGATCTGTTGCAGACTCCATTTTCGTTGGATTCATGA MASGFGESTSRQPQSPSCSDNNGDASNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHIHSHPQECPVCKAMIEEQKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPEAAGPPPEPNPFAHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGANFPYGFPNMFHGSHGHGHAHAHGYYHHLRQAMVLSMFIISILSQYLFRFLKSSIPVWFIFELQSCTRFVKYVVLIEEQGKDQDHHPLIPCWELSSLLLLEYFLKPHLKAKATHHRPVTISLILTIHIKTHLLPFLLPHFLSPAAAMFKPRAALLFFIFSLTAVNATVLFKEAPQFYNSPDCPSVFEGEEDGHRLCSDDGVHVAMTLDTAYIRGSMAAILSVLQHSPCPQNVIFHFVSSASANALSLHATISSSFPYLKFKIYPFDDVAVSRLISTSIRSALDCPLNYARSYLADLLPLCVRRVVYLDSDIILVDDIANLANTPLNDAVLAAPEYCNANFTAYFTPTFWSNPSLSLTFANRNPCYFNTGVMVIDLSRWRLGDFTAEIEEWMELQKRMRIYELGSLPPFMLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARVDANRPCPLDSLWVPYDLLQTPFSLDS Homology
BLAST of CmoCh12G004420 vs. ExPASy Swiss-Prot
Match: Q9LN68 (Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana OX=3702 GN=GATL1 PE=2 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 1.4e-148 Identity = 257/340 (75.59%), Postives = 287/340 (84.41%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy Swiss-Prot
Match: Q9S7G2 (Probable galacturonosyltransferase-like 2 OS=Arabidopsis thaliana OX=3702 GN=GATL2 PE=2 SV=1) HSP 1 Score: 492.3 bits (1266), Expect = 8.8e-138 Identity = 233/319 (73.04%), Postives = 271/319 (84.95%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy Swiss-Prot
Match: Q8VYF4 (Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana OX=3702 GN=GATL7 PE=2 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.1e-111 Identity = 190/308 (61.69%), Postives = 231/308 (75.00%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy Swiss-Prot
Match: O04253 (Probable galacturonosyltransferase-like 6 OS=Arabidopsis thaliana OX=3702 GN=GATL6 PE=2 SV=1) HSP 1 Score: 405.2 bits (1040), Expect = 1.4e-111 Identity = 195/338 (57.69%), Postives = 241/338 (71.30%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy Swiss-Prot
Match: Q0V7R1 (Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana OX=3702 GN=GATL3 PE=2 SV=1) HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-109 Identity = 192/338 (56.80%), Postives = 238/338 (70.41%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy TrEMBL
Match: A0A6J1GHV8 (Hexosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454078 PE=3 SV=1) HSP 1 Score: 807.0 bits (2083), Expect = 5.9e-230 Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy TrEMBL
Match: A0A6J1KP77 (Hexosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111496018 PE=3 SV=1) HSP 1 Score: 684.5 bits (1765), Expect = 4.4e-193 Identity = 328/340 (96.47%), Postives = 336/340 (98.82%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy TrEMBL
Match: A0A5A7VAB8 (Hexosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006040 PE=3 SV=1) HSP 1 Score: 683.7 bits (1763), Expect = 7.6e-193 Identity = 335/393 (85.24%), Postives = 353/393 (89.82%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy TrEMBL
Match: A0A1S3BAX6 (Hexosyltransferase OS=Cucumis melo OX=3656 GN=LOC103487940 PE=3 SV=1) HSP 1 Score: 640.6 bits (1651), Expect = 7.4e-180 Identity = 305/333 (91.59%), Postives = 316/333 (94.89%), Query Frame = 0
BLAST of CmoCh12G004420 vs. ExPASy TrEMBL
Match: A0A6J1K8X5 (Hexosyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111491743 PE=3 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 5.3e-178 Identity = 303/341 (88.86%), Postives = 318/341 (93.26%), Query Frame = 0
BLAST of CmoCh12G004420 vs. TAIR 10
Match: AT1G19300.1 (Nucleotide-diphospho-sugar transferases superfamily protein ) HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-149 Identity = 257/340 (75.59%), Postives = 287/340 (84.41%), Query Frame = 0
BLAST of CmoCh12G004420 vs. TAIR 10
Match: AT3G50760.1 (galacturonosyltransferase-like 2 ) HSP 1 Score: 492.3 bits (1266), Expect = 6.2e-139 Identity = 233/319 (73.04%), Postives = 271/319 (84.95%), Query Frame = 0
BLAST of CmoCh12G004420 vs. TAIR 10
Match: AT3G62660.1 (galacturonosyltransferase-like 7 ) HSP 1 Score: 405.6 bits (1041), Expect = 7.7e-113 Identity = 190/308 (61.69%), Postives = 231/308 (75.00%), Query Frame = 0
BLAST of CmoCh12G004420 vs. TAIR 10
Match: AT4G02130.1 (galacturonosyltransferase 6 ) HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-112 Identity = 195/338 (57.69%), Postives = 241/338 (71.30%), Query Frame = 0
BLAST of CmoCh12G004420 vs. TAIR 10
Match: AT4G02130.2 (galacturonosyltransferase 6 ) HSP 1 Score: 405.2 bits (1040), Expect = 1.0e-112 Identity = 195/338 (57.69%), Postives = 241/338 (71.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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