CmoCh12G003750 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G003750
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	V-type proton ATPase proteolipid subunit
Location	Cmo_Chr12: 2323767 .. 2325539 (+)
RNA-Seq Expression	CmoCh12G003750
Synteny	CmoCh12G003750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTTTTGGTTTTCCTAATCGATTATTCCAGATAACGTGGAGAGATTTTATAGAATCGAAGAGAAGAAAGGTCAGTATCTGAAGAGAAAGCTAAAGCACAGTGAGAAGAAGAAGAAAAGAAAAAAGAATCTTCAGATCTGATCTAATCGGAGATCCTCCTCTTTGTTCCAACCGGAAAAAATGTCGTCAGCCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTAAGAAAATTTTCATTCAATTCGATTGATTACATGTCTCTTGTAACGGATCTTGATTGGCTTTTGTTCTTGTGAATTAGGTATGGGAGCCGCTTATGGGACCGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGTACTTTTCTTTAATCCGTTACTCTGAAATGTAGATTTAGATGTATTGTGGATGCTTCAATCTGGCTTGATCTCGTTTTTTGTGGTTTATTAACTTATCTTTTCAATTTGCTTCTGCTAATTTTCAACTTCGGTGAAAGTACTTTGATTGAAGATTTTGTTATCAGAGTCTATGTCACCATGATCAAATAATGGAATAAGATTGTTCTTGGGAAGGATTGCCTTTGTTGAGAATGAATTTAGCAATCAAGTTCAGTCTGATCTCAATTTAGGTTTAAGCTCAAAGCTCTGGATTCTTGCCTTTTGTGTTAAATTCGTTCTAGACTATTTCCTGCCTTAGTTCACTATTAATAGTCTAATGCTTCAAACCCTGAAAAGATTGATGGTATCACTATTGTTCTTGATCCCTTGATGTTTGCACATACCCTTTGCAAATCGAGCAATGTTTTTGTAACAATCCAAACCTACCGCTAACTGATATTATCCGCTTTGGCTCGTTACGATTGTCGTCAGCCTCATGATTTTTAAACACCTCAGTTGGATAGAGTTTTCATACCCTTATAAGGAATGTTTCGTTCTTCTCTCCCACCAATGTGGGATCTCACAGAATCATTCTTTATAAGAAAGGGTGTGGAAACCTCTCCCTGACAGACGGGTTTTAAAAATCTTGAGGGAAAGCTCGAAAGGGAAAGTCCAAAGAGGACAATATCGGCTAGTGGTGAGCTTGGGCTGTTACAAAAATGCTTTTAACGTAGAATGGAAGCATCTAATTGTATATGTCTTCTGCAGGGCCAATGCACAACAGCCTAAGCTTTTTGTTGGGATGATTCTCATTCTAATTTTCGCCGAAGCGCTTGCCCTTTATGGACTTATTGTCGGTATTATTCTCTCGTCCCGAGCTGGTCAGTCGAGAGCTGATTAATTGAACGTTTTGCGCTTTGAAAATGTGTATTATGTCTCTTTTTTCCTTCAAGATTTGTTTTTGTAGTTCTCTGATTAGAAATGGTCATAACTCAGTTTACTTTCTCAAATATTCGTATGTTGTTGTGTGGTTTTCTACCACACGGATGCTGTACTCATAAGGATTTGGAATTTATTATTCTTCTCAATAAACATAAAACCTTATTTCCTTGGCTGCTTATTGTGCTC

mRNA sequence

GGGTTTTGGTTTTCCTAATCGATTATTCCAGATAACGTGGAGAGATTTTATAGAATCGAAGAGAAGAAAGGTCAGTATCTGAAGAGAAAGCTAAAGCACAGTGAGAAGAAGAAGAAAAGAAAAAAGAATCTTCAGATCTGATCTAATCGGAGATCCTCCTCTTTGTTCCAACCGGAAAAAATGTCGTCAGCCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCCGCTTATGGGACCGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGGCCAATGCACAACAGCCTAAGCTTTTTGTTGGGATGATTCTCATTCTAATTTTCGCCGAAGCGCTTGCCCTTTATGGACTTATTGTCGGTATTATTCTCTCGTCCCGAGCTGGTCAGTCGAGAGCTGATTAATTGAACGTTTTGCGCTTTGAAAATGTGTATTATGTCTCTTTTTTCCTTCAAGATTTGTTTTTGTAGTTCTCTGATTAGAAATGGTCATAACTCAGTTTACTTTCTCAAATATTCGTATGTTGTTGTGTGGTTTTCTACCACACGGATGCTGTACTCATAAGGATTTGGAATTTATTATTCTTCTCAATAAACATAAAACCTTATTTCCTTGGCTGCTTATTGTGCTC

Coding sequence (CDS)

ATGTCGTCAGCCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCCGCTTATGGGACCGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGGCCAATGCACAACAGCCTAAGCTTTTTGTTGGGATGATTCTCATTCTAATTTTCGCCGAAGCGCTTGCCCTTTATGGACTTATTGTCGGTATTATTCTCTCGTCCCGAGCTGGTCAGTCGAGAGCTGATTAA

Protein sequence

MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD

Homology

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BLAST of CmoCh12G003750 vs. ExPASy Swiss-Prot
Match: Q96473 (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=23013 PE=2 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 7.9e-80
Identity = 164/165 (99.39%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSS FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy Swiss-Prot
Match: Q43434 (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-79
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSS FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy Swiss-Prot
Match: P68162 (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris OX=161934 GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.9e-79
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MS+ F+GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy Swiss-Prot
Match: P68161 (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum OX=3544 GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 3.9e-79
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MS+ F+GDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy Swiss-Prot
Match: P59228 (V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.1e-79
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           M+S FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy TrEMBL
Match: Q9SXS6 (V-type proton ATPase proteolipid subunit OS=Citrus unshiu OX=55188 GN=CitVATP c-1 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy TrEMBL
Match: A0A6J1KLJ6 (V-type proton ATPase proteolipid subunit OS=Cucurbita maxima OX=3661 GN=LOC111496340 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy TrEMBL
Match: A0A0A0LLK8 (V-type proton ATPase proteolipid subunit OS=Cucumis sativus OX=3659 GN=Csa_2G365650 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy TrEMBL
Match: A0A067FUW1 (V-type proton ATPase proteolipid subunit OS=Citrus sinensis OX=2711 GN=CISIN_1g031129mg PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. ExPASy TrEMBL
Match: A0A6J1GJX6 (V-type proton ATPase proteolipid subunit OS=Cucurbita moschata OX=3662 GN=LOC111454568 PE=3 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.0e-77
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165

[Close]

BLAST of CmoCh12G003750 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 295.0 bits (754), Expect = 3.6e-80
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60
           M+S FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MASTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 121 VRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165

[Close]

BLAST of CmoCh12G003750 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 293.9 bits (751), Expect = 8.1e-80
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 2   SSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 61
           SS FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM
Sbjct: 3   SSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVM 62

Query: 62  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 121
           AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV
Sbjct: 63  AGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGV 122

Query: 122 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 123 RANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166

[Close]

BLAST of CmoCh12G003750 vs. TAIR 10
Match: AT2G16510.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-79
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 3   SAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
           S FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164

[Close]

BLAST of CmoCh12G003750 vs. TAIR 10
Match: AT4G38920.1 (vacuolar-type H(+)-ATPase C3 )

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-79
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 3   SAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
           S FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164

[Close]

BLAST of CmoCh12G003750 vs. TAIR 10
Match: AT4G34720.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 292.7 bits (748), Expect = 1.8e-79
Identity = 161/163 (98.77%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 3   SAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 62
           S FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA
Sbjct: 2   STFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA 61

Query: 63  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 122
           GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR
Sbjct: 62  GVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVR 121

Query: 123 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 166
           ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRA+
Sbjct: 122 ANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164

The following BLAST results are available for this feature:

BLAST of CmoCh12G003750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96473	7.9e-80	99.39	V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana OX=2...	[more]
Q43434	2.3e-79	98.79	V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum OX=3635 GN...	[more]
P68162	3.9e-79	98.18	V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris OX=161934 GN=VM...	[more]
P68161	3.9e-79	98.18	V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum...	[more]
P59228	5.1e-79	98.18	V-type proton ATPase subunit c2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c2 PE=2 S...	[more]

BLAST of CmoCh12G003750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q9SXS6	1.0e-77	100.00	V-type proton ATPase proteolipid subunit OS=Citrus unshiu OX=55188 GN=CitVATP c-...	[more]
A0A6J1KLJ6	1.0e-77	100.00	V-type proton ATPase proteolipid subunit OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A0A0LLK8	1.0e-77	100.00	V-type proton ATPase proteolipid subunit OS=Cucumis sativus OX=3659 GN=Csa_2G365...	[more]
A0A067FUW1	1.0e-77	100.00	V-type proton ATPase proteolipid subunit OS=Citrus sinensis OX=2711 GN=CISIN_1g0...	[more]
A0A6J1GJX6	1.0e-77	100.00	V-type proton ATPase proteolipid subunit OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of CmoCh12G003750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19910.1	3.6e-80	98.18	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	8.1e-80	98.78	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT2G16510.1	1.8e-79	98.77	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G38920.1	1.8e-79	98.77	vacuolar-type H(+)-ATPase C3	[more]
AT4G34720.1	1.8e-79	98.77	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 134..157 score: 82.68 coord: 107..133 score: 85.77 coord: 56..80 score: 71.05 coord: 30..54 score: 82.74
None	No IPR available	GENE3D	1.20.120.610		coord: 11..162 e-value: 2.3E-64 score: 217.6
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 3..165
None	No IPR available	PANTHER	PTHR10263:SF63	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 3..165
None	No IPR available	CDD	cd18175	ATP-synt_Vo_c_ATP6C_rpt1	coord: 13..80 e-value: 4.72654E-31 score: 104.925
None	No IPR available	CDD	cd18176	ATP-synt_Vo_c_ATP6C_rpt2	coord: 89..156 e-value: 6.33473E-31 score: 104.51
IPR011555	V-ATPase proteolipid subunit C, eukaryotic	TIGRFAM	TIGR01100	TIGR01100	coord: 13..121 e-value: 7.3E-52 score: 172.1
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 97..155 e-value: 2.5E-20 score: 72.5 coord: 17..76 e-value: 8.6E-14 score: 51.6
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 87..156
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 13..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G003750.1	CmoCh12G003750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity