Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGTTAAAAACCCTTTCCTTCGCAGTTCGTGCAACCGTTACCTTCTTCATAAACCCTAAACATCTCAGAACACACACCAATTTCTCGCTCATTTTGATTTTGCAGTTTATGCTTTGTAAAGTAAATCCTTTTCCTGAGTAGTGTTTCAAGATGTCCTCGAGTAATCTTCAATCTGAATCGCCTCGAAACCCTAGAGTGGCGTGGGAAGGCTGCAGCGTTTTACTCGACATCAATGATGGCGACCGCCTGGTTTTTGCTCGACTCTCGCCTGCCTCGTACGTTTTTCGCCACCAAATTATTGTGTTGATTTGTGTTTTTCAATACTCAGTAAGTGACAGAAAATACTTCGATTTGCAGTACGCTGAAAATCGGGAATAAAAGTTACTCTCTGAAGCCCTTGATCGGTCGTCCTTTTGGTTCGTTGTTTCAAATTGAAAGTGGAGACAATGGTCAACATTTGGCTTGTGTTACGCCCTCCAGAGAAGAAGGTTTGATTTCTTGCTATGAGTTTTGTCAACGAATTGCTTTCATCTTTGCAAAAATTTTAACGGAAGCGTTTTTCTACTTTGGCATCTGTTTCCGAACGCAATAATGGTCAAGAAACGGAGGAGATGAAGGAAGAACAGGTGGTCAAAGATGAGCTGAGAGATAACAGAGCGCTTGTAGACAATAATAAGGCACAAAGCCTCTCTAGCGAAGATATAGATGCAATGCGAAGGTAAGACATTGATTTACTTTTCCACTGGTTCAAGAACATGTTAAGGCTTTAGCATTTTCTAGATTTATTTCAAGAAACTTGCCACCATGTTTTTTAAAATTATGTTATTGTTCAAGATGCATAATCTTTCTCTTTATATGTAGTCAGGGTGCAACTGGTGATGAAATTGTGGAAGCTCTCATTGCCAACAGTGCAACATTTGAAAAGAAAACAGTTTTCTCTCAGGTGATCGGAATGTTCATATGCTGAGTATCTTCATCTTTGTTTGTCGGTTTTTTTCCTTCTAAAATCGTCCAATTCATATTATCTGCAGGAGAAATATAGGCTCAAAAAACAGAAGAAATATGCTCCTAGGGTACTTTTGAGGAGACCTTTTACTCGAAGGTATCGATGATGACACTTAAATACCAAGAACTTTTTCATAATATATAATGGGTAGTTTATATCAAAATCATGCATATTTCTTTCTATATGTAACATCTTGAAAATAGTAGAGTTCATTTTATGGCCCAGTTTCCGTTGTTTAATGTTGATGTTTCTGTTCCCCATCTTGCAGTATATGTGAGGCATACTTCAAGAAATTTCCAGCTAGAATCGGGTAATCTTACATGTCCATTTTTTTCCATTCAGTTTTAATTCTTTCCATGAGCATTCATTATACATCTCGTTATTTAAAATAATTATTTTAGTTGTAACAACAACCTGCACGTTTTCTATTCATTAGATGACTAAAAGAGATGGTGTCATATGAGGACGTTAATTTGGGTCAATTTTTTGATGTTTGGAAATTATCACTGTGATAATATTATTCTGATCTTCCACCTTTCTATTTGCTTAAGGAATAGTTGGATTTTTTTTGCCAGTAATATCACAATTTACATTATAATGTTCAAGTTCAATTGTAATATTTTATGGGTAACAGCATCTTATTGCCCTTGCTATGAATTTCTTGATCTATCTCCTGGTTATAATAATTGAATTTCACATTATTTATCATATTTTAAGTTTCTATTCTTTCCTTATGTCATTACTCATCATAAGCTCTCTGATGGTTTGATGTTGGAAACAGTATTAATGTGATCTGTTTCCTTGCTTATGATTCAGATTCTTGAGAGTGGATGCTCTGTCTCTTCTTCTTTCTTTTGCCAACGTGACTTCGAATTCTGATGTTCTTGTGTTTGATATGGTTGGTGGTCTTATCACTGGAGCTGTGGCTGAGCGCTTAGGAGGTCTGTCACATCCTTTATCATTCTTGGCATTAATAAAATGGTGGTTCATTTTTGTTCAAAATGGCCGTCAATCCTTAATGAATGGTGTGCCCTGGCATAAAATCTGGGCTATATGTGCAAGGAAAGAAGTTTTGGTGTAAAATAGGCGTGACTGAAAATTATTCGAGCAAATCTGACTGCTTCTTATTTGTACTCATCTCAAGAAAATTAGGGTCATATTAGCTCATGTATATAGTTTATAGGGCGTTTACCGTATTTTCCAGTCTTACTATCTCCCTAATTCAATTTTGATTTGTGTTAGTGTGACATATATGGGGTTTTCCTAAAGGTCGTAAGTGTGGCTTGAAATATTTGGGGGGTATCTTCATGGTCGTGTTTTTTACCGTGTTGAAAACTCGATGACTTAAAACCTGTGTTGTTTCATTGGGTTAGTCTAGGGTGGGCAAAGGCTAAGCCTCTTTTATTAGTGCGAGGTGTCCATATGCATAGTTGGAATAAACAGGGGAAAAAACATAATTAGGTGTCAAGTTTCAATATGATAATTACAATCGTGTATTTTGCTTAGAATATGTGATGCTAAATTGTGTTGGTTTGTTTACAGGCAAGGGTTCTGTATGCAATACATACCTTGGAAGTAATCCAAATCCTATGGAAATAGTAAGAATGTTCAACTTTGATGATGAAATTTGCGCAAGGTTTGCTGCTTTTGTCCGCTTTCTTTATCTCGTTTGCATTACACATTTTCTTAAATGTCTTTCTAGTTTTTACACCATTTAGTAACTTTTTATCCACCAGGATAATGCGTTCACCTCTTACCGATCTCACCTCATCCCAAGTTTCTAATGGTGAACACGAAGTCACTGTAAGTAGAATTTTTCTTTTCTCATAGTTTTTTTAAGATGAGTTTCAAATAGACTTTTAGGATGCTGAATAGTGCTTTTGATTATAAGTGCTTATAGAAGTATCTGGTGTGCAATTGAAAGTGAAATGGCCCAAGCCCACCGCTAGCAGATATTGTCTTCTTTGGGCTTTTCCTTTTGGGCTTATCCTCACGGTTTTTAAAATGCGTTTGCTAGGCAGAGGTTTCCACACCCTTATAAAGGGTGTTCCGTTCTCCTCCCCAACCAATGTGGGATTTCACAATCCACCTCCCTTCGGGGACCAGCGTCCTCACTTGCACTCGTTCCTTTTTACAATCGATGTGGGACCCCACCAAATCCACCCCCTTCGGGGTCCAGCGTTTTTGCTGGCACATCGCCTCATGTCCATCCCTTTTTGGGGCTCACCCTCCTCGCTGGCACATCGCCCAGTATCAGACTTTGATACCATATGTAACAGCCCAAGGTCATGTCTACTAGGGAGAGGTTTTCACACCCTTGTAAAGAATGTTTTGTTCTCCTCCCCAACCAATGTGAGATCTCACAAAAAAAAAAAAAAATGATTTTGAAATTCCTTAAAATACTTTAAAGGGACTTTATACTATGTTTAGAAGTGCGCTTAGTTAGTCCTCCAAAAAGTACCAGTTTAAAATTTGTTATTCTCGAAATTCATTTAGTAATAATTCTGTTTCTTTTTCTTTTTGGTAAAGATTAAAGCACAGGATGAGGCATCTGAACCTGTTAATATGGATGAAGGCCCTCTACCATCTACAGACCAGTCTTCAGATCTCAACTCAGAGTCTATAGTTTCTCCATTAACTAAAGTATTAAAATGCGCAAAGGCTGGAGATAAGGCACCGCCAGAAGTTGTTAAATCATGGAAAGAAAATGGTTTTACAAGGTGAATATAGTTTGGTGGTAATATTTGTTTTCACCATTCATAGTAATTCACTGAATTCTTTTGAATACTTGCAGCCTAATAATTGCTGCTCCACAGTCGGATGCATGGGGCCTTGTTAAAGATCTGTTGCCTCTTGTAGCAAATTCTGCCCCATTTGCTATCTATCACCAGTATCTTCAGGTTGGTTCTCGGAAAAGGAATCTATATATATATATATACCTTCAATCTGGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTCTGAGCATAAGCTCTCATGGCTTTGCTTTGGGTTTCCCCAAAAGGTCTCATACCATTGGAGAGAGTATTCCTTGATTATAAACCTATGATCATTCCCTAAATTAGGCGATGTGGGACTTTCATCATCCAACACCTCCCCTCAAACAAAGTACGTCTCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCAGTTTTTACTATGCTTTTGAGCAGGGTTGACTCCTTTTCTTTTGGAGTCCTTTGTTCGACGTTTGAAGATTTACCAATCAATTGGCACGACTAAGTTTAGGGCATGACTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATTGTCTACTTTGAGCATAAGCTCACATGACTTTGCTTTGGGTTTCCCCAAAAGGCCTCATACCAATGGAGAGAGCATTCCTTGATTATAAACCCATGATCATTTCCTAAATTAGCCGACGTGGGACTTTCATCATCCAACATATCTTACCAAGGACTTCAATATTTGAAGTTAACCTCATGAGTCTATTGGGTTAGTCGAAAACGTAATAATTTATGACATGTTTGTGAGTGATTTTGGTATTTACCAAAATGACTTTTGTCGTGCCCTTTTCAGTAAAAAGTGGCGTGATAAAACTGGACGGGTTTGAGAGTAATTTTGGTATTATCATCATATATGTCATGCCCTTTTTAGTAATTTCAGAGTAGGCAAAATCTCTCCAAGAATTAGCAAGGGGTGAGTCTATCTATTTTATACATGGCATGCACTAGATTGATTAAGTTGATCGTTTGTAAAATGCAGCCTCTTGCAACTTGCATGCATAAACTGCAGCTTGAGAAGATGGCAATCAGCTTGCAAATATCAGAACCTTGGCTTCGTGAATACCAGGTTTGATGGCTCTACATTTCTTCTGCTAATTTTAGGAATTAAAATGGGGAACTATCATATATATATATATATATATATATATATATAATTTATAACATGAAAAATCTTTGTTTAATAGCATCATGAAAGGAGTTAGGAATCACGACTCTCCACATTGGTATGATATTGTCTACTTTGAGCATAAGCTCTCATAGCTTTGCTTTGAGATTCTCAAAAGGTCACACCAATGGAGAGAGTATTTCTTGATTATAAACCCATGATCATTCCCTTAATTAGCCGATGTGGGACTTTCATCATCCAACACCTCCCCTCGATCAAACTACGTCTCCCCTTAATCGAGCCTCGACTCCTTTTTCTTTTTGGAGTCCTTTGTCCGACATGGTTAAGTTTAGGGCATGGCTCTGATACCATGTTAGGAATCATGACTCTCCACAATAGTATGATATGTCACTTTGAGCCTAAACTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGCCTCACACCAATGGAGAGAGTATTCCTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGACGTGGGACTTTCATCATCCAATAAAAGGAAAATTTTTTATTAGTAGAACTAGTTTGGGCTGGCGGGCAATAGGCTTAGATCAAATGCAAGCAAGCTAGATCTCAATAAAGGGGGGAGTGTGAGGTGGGTTGGCCCTTCGGTCAAGAGGCGGGATAGTGTCCCACCTTTCTGTCTTGACTGGTAGGCACAATCGCTTGAGTCGTCTAGTTCTTGAGTGAAGTAATCGCCTTCAACGATAATTGCTTTTTAGCTATCAACCATCAACGGGTAGGCACAATGTTGAGTCTTTTATTTGCAGCTAGGAGGGATAAGGAGTCTAAATAAGTGGAATGAAGCATCCAAAATGTGTATTTTCTTAATTTTTTGTAATGATTTTTTTTTTTTATACAATGATAATAATGCAGGTTCTTCCTTCGAGAACCCATCCCTTCATGCAGATGAATGCGTTTGGTGGATACATTCTCAGTGGGACCAAGATTTGTGATGTAGCCCATCAACAAGCAATTTGAAGGTGCAGATTCTAATTTTAAATCAAATTTTGCCATCACCTTCCTTTTCCTTTTAATTACTTCACATAAAAACCATATTATGATCTAGACATGAATGACATCTTATCTACATTTAGCTTTATATTTTTTTTTGGGTGATTTTATCAATCTCTTACAAATTTAATTCATATGATTTGAAATAACTTAGAATTTAGTCC
mRNA sequence
CGGTTAAAAACCCTTTCCTTCGCAGTTCGTGCAACCGTTACCTTCTTCATAAACCCTAAACATCTCAGAACACACACCAATTTCTCGCTCATTTTGATTTTGCAGTTTATGCTTTGTAAAGTAAATCCTTTTCCTGAGTAGTGTTTCAAGATGTCCTCGAGTAATCTTCAATCTGAATCGCCTCGAAACCCTAGAGTGGCGTGGGAAGGCTGCAGCGTTTTACTCGACATCAATGATGGCGACCGCCTGGTTTTTGCTCGACTCTCGCCTGCCTCTACGCTGAAAATCGGGAATAAAAGTTACTCTCTGAAGCCCTTGATCGGTCGTCCTTTTGGTTCGTTGTTTCAAATTGAAAGTGGAGACAATGGTCAACATTTGGCTTGTGTTACGCCCTCCAGAGAAGAAGAAACGGAGGAGATGAAGGAAGAACAGGTGGTCAAAGATGAGCTGAGAGATAACAGAGCGCTTGTAGACAATAATAAGGCACAAAGCCTCTCTAGCGAAGATATAGATGCAATGCGAAGTCAGGGTGCAACTGGTGATGAAATTGTGGAAGCTCTCATTGCCAACAGTGCAACATTTGAAAAGAAAACAGTTTTCTCTCAGGAGAAATATAGGCTCAAAAAACAGAAGAAATATGCTCCTAGGGTACTTTTGAGGAGACCTTTTACTCGAAGTATATGTGAGGCATACTTCAAGAAATTTCCAGCTAGAATCGGATTCTTGAGAGTGGATGCTCTGTCTCTTCTTCTTTCTTTTGCCAACGTGACTTCGAATTCTGATGTTCTTGTGTTTGATATGGTTGGTGGTCTTATCACTGGAGCTGTGGCTGAGCGCTTAGGAGGCAAGGGTTCTGTATGCAATACATACCTTGGAAGTAATCCAAATCCTATGGAAATAGTAAGAATGTTCAACTTTGATGATGAAATTTGCGCAAGGATAATGCGTTCACCTCTTACCGATCTCACCTCATCCCAAGTTTCTAATGGTGAACACGAAGTCACTATTAAAGCACAGGATGAGGCATCTGAACCTGTTAATATGGATGAAGGCCCTCTACCATCTACAGACCAGTCTTCAGATCTCAACTCAGAGTCTATAGTTTCTCCATTAACTAAAGTATTAAAATGCGCAAAGGCTGGAGATAAGGCACCGCCAGAAGTTGTTAAATCATGGAAAGAAAATGGTTTTACAAGCCTAATAATTGCTGCTCCACAGTCGGATGCATGGGGCCTTGTTAAAGATCTGTTGCCTCTTGTAGCAAATTCTGCCCCATTTGCTATCTATCACCAGTATCTTCAGCCTCTTGCAACTTGCATGCATAAACTGCAGCTTGAGAAGATGGCAATCAGCTTGCAAATATCAGAACCTTGGCTTCGTGAATACCAGGTTCTTCCTTCGAGAACCCATCCCTTCATGCAGATGAATGCGTTTGGTGGATACATTCTCAGTGGGACCAAGATTTGTGATGTAGCCCATCAACAAGCAATTTGAAGGTGCAGATTCTAATTTTAAATCAAATTTTGCCATCACCTTCCTTTTCCTTTTAATTACTTCACATAAAAACCATATTATGATCTAGACATGAATGACATCTTATCTACATTTAGCTTTATATTTTTTTTTGGGTGATTTTATCAATCTCTTACAAATTTAATTCATATGATTTGAAATAACTTAGAATTTAGTCC
Coding sequence (CDS)
ATGTCCTCGAGTAATCTTCAATCTGAATCGCCTCGAAACCCTAGAGTGGCGTGGGAAGGCTGCAGCGTTTTACTCGACATCAATGATGGCGACCGCCTGGTTTTTGCTCGACTCTCGCCTGCCTCTACGCTGAAAATCGGGAATAAAAGTTACTCTCTGAAGCCCTTGATCGGTCGTCCTTTTGGTTCGTTGTTTCAAATTGAAAGTGGAGACAATGGTCAACATTTGGCTTGTGTTACGCCCTCCAGAGAAGAAGAAACGGAGGAGATGAAGGAAGAACAGGTGGTCAAAGATGAGCTGAGAGATAACAGAGCGCTTGTAGACAATAATAAGGCACAAAGCCTCTCTAGCGAAGATATAGATGCAATGCGAAGTCAGGGTGCAACTGGTGATGAAATTGTGGAAGCTCTCATTGCCAACAGTGCAACATTTGAAAAGAAAACAGTTTTCTCTCAGGAGAAATATAGGCTCAAAAAACAGAAGAAATATGCTCCTAGGGTACTTTTGAGGAGACCTTTTACTCGAAGTATATGTGAGGCATACTTCAAGAAATTTCCAGCTAGAATCGGATTCTTGAGAGTGGATGCTCTGTCTCTTCTTCTTTCTTTTGCCAACGTGACTTCGAATTCTGATGTTCTTGTGTTTGATATGGTTGGTGGTCTTATCACTGGAGCTGTGGCTGAGCGCTTAGGAGGCAAGGGTTCTGTATGCAATACATACCTTGGAAGTAATCCAAATCCTATGGAAATAGTAAGAATGTTCAACTTTGATGATGAAATTTGCGCAAGGATAATGCGTTCACCTCTTACCGATCTCACCTCATCCCAAGTTTCTAATGGTGAACACGAAGTCACTATTAAAGCACAGGATGAGGCATCTGAACCTGTTAATATGGATGAAGGCCCTCTACCATCTACAGACCAGTCTTCAGATCTCAACTCAGAGTCTATAGTTTCTCCATTAACTAAAGTATTAAAATGCGCAAAGGCTGGAGATAAGGCACCGCCAGAAGTTGTTAAATCATGGAAAGAAAATGGTTTTACAAGCCTAATAATTGCTGCTCCACAGTCGGATGCATGGGGCCTTGTTAAAGATCTGTTGCCTCTTGTAGCAAATTCTGCCCCATTTGCTATCTATCACCAGTATCTTCAGCCTCTTGCAACTTGCATGCATAAACTGCAGCTTGAGAAGATGGCAATCAGCTTGCAAATATCAGAACCTTGGCTTCGTGAATACCAGGTTCTTCCTTCGAGAACCCATCCCTTCATGCAGATGAATGCGTTTGGTGGATACATTCTCAGTGGGACCAAGATTTGTGATGTAGCCCATCAACAAGCAATTTGA
Protein sequence
MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRPFGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVSNGEHEVTIKAQDEASEPVNMDEGPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQMNAFGGYILSGTKICDVAHQQAI
Homology
BLAST of CmoCh12G003620 vs. ExPASy Swiss-Prot
Match:
Q54UB1 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 OS=Dictyostelium discoideum OX=44689 GN=trmt6 PE=3 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 4.1e-54
Identity = 144/432 (33.33%), Postives = 233/432 (53.94%), Query Frame = 0
Query: 19 EGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRPFGSLFQIESGDNGQHLAC 78
EG V+LDIN+G++ ++ S +KIG K + +IG + S FQ+ + N L
Sbjct: 37 EGDHVILDINNGEKFSVIKVKLGSKVKIGKKQILINSIIGESYYSSFQVSNEKN--TLER 96
Query: 79 VTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDEIVEALI 138
+T ++E + + + DNR L NN AQ L+ EDI+ M+ +G + I++ ++
Sbjct: 97 IT--QKEIDDRLNNLVELNQNDADNRNLDQNNTAQKLTQEDINEMKQKGTDSNTIIKTIV 156
Query: 139 ANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALS 198
NS +F+ KT FSQ KY KK KKY+ V + +P +S+ EAY+KK +I LR D+
Sbjct: 157 ENSESFKTKTSFSQIKYLKKKIKKYSTIVKIIKPTLKSLTEAYYKKDSRKICGLRFDSFG 216
Query: 199 LLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVRMFNFDD 258
LL+ N+ +NS VLV + GL+TG++AER+ G+G++ + Y+G P+ + IV F F+
Sbjct: 217 QLLTLGNIRANSQVLVVETCMGLVTGSIAERMNGQGTILSAYIGKGPS-LSIVNNFGFNT 276
Query: 259 EICARIMRSPLTDLTS------------SQVSNGEHEVTIKAQDEASEPVNMDEGPLPST 318
++ I L ++TS S+G ++ +K +++ E DE
Sbjct: 277 DVLNTIYPFNL-NITSVLNKGEDISKLPPTASSGIYDKQVKEKEKEKE---KDEN--VKD 336
Query: 319 DQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAWGLVKDL 378
++ S +++I++ + D + +VK K+ G SL+I S ++
Sbjct: 337 EKESGEEAKTIIN---------QRNDTSNENIVKLLKDGGVWSLVIVTKYSPL-NILLSC 396
Query: 379 LPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQMN 438
P + +S F IY Q+ QPL L +MA++ QISE W+RE+QVLP RTHP M M+
Sbjct: 397 WPYLNSSGSFVIYSQFPQPLMEVHQFLHKNQMAVNQQISEIWMREHQVLPKRTHPMMGMD 447
BLAST of CmoCh12G003620 vs. ExPASy Swiss-Prot
Match:
Q8CE96 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Mus musculus OX=10090 GN=Trmt6 PE=1 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 9.7e-48
Identity = 139/454 (30.62%), Postives = 213/454 (46.92%), Query Frame = 0
Query: 27 INDGDRLVFARLSPASTLKIGNKS--------YSLKPLIGRPFGSLFQIESGDNGQHLAC 86
I+DGD +V R +++ + + L IG +GS F + SG + Q
Sbjct: 21 IHDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNAIGHSYGSAFDVSSGGSLQ---- 80
Query: 87 VTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDEIVEALI 146
+ EE E KE DNR +VD+ K+Q L+ +DI A++ +G G+EIV+ LI
Sbjct: 81 LRKKLEEPASETKEAGT------DNRNIVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLI 140
Query: 147 ANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALS 206
NS TF KT F+Q+KY KK+KKY V + +P TR + Y+ + P +I +R D L+
Sbjct: 141 ENSTTFRDKTEFAQDKYIKKKKKKYEAIVTILKPSTRILSIMYYAREPGKINHMRYDTLA 200
Query: 207 LLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVRMFNFDD 266
+L+ N+ + + ++V + GL+ GA+ ER+GG GS+ Y G P F F
Sbjct: 201 QMLTLGNIRAGNKMIVMETCSGLVLGAMMERMGGFGSIIQLYPGDGP-VRAATACFGFPK 260
Query: 267 EICARIMRSPLTDLTSSQVSNGEHEV-TIKAQDEASEPVNMDEGPLPSTDQSSDLNSESI 326
+ + PL + S + NG + ++ + S PV G L + + + ++I
Sbjct: 261 SFLSGLYEFPLNKVNS--LLNGTFSAEMLSSEPKDSTPVEESNGELEEKEIAEQADEDNI 320
Query: 327 VSPLTKVLKCAKAGDKAPPEVVKSWKEN-------------------------------- 386
V +G++ P E+V EN
Sbjct: 321 VDAAEN-----NSGEQRPMEIVPGDPENKEPKEKRSKRDYIQEKQRRQEEQRKRHLEAAA 380
Query: 387 ----GFTSLIIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAIS 436
+I A + L+ LL VA S PF +Y QY +PL C KL+ I+
Sbjct: 381 LLGERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVIN 440
BLAST of CmoCh12G003620 vs. ExPASy Swiss-Prot
Match:
Q2T9V5 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Bos taurus OX=9913 GN=TRMT6 PE=2 SV=1)
HSP 1 Score: 192.2 bits (487), Expect = 1.3e-47
Identity = 138/449 (30.73%), Postives = 215/449 (47.88%), Query Frame = 0
Query: 27 INDGDRLVFARLSPASTLKIGNKS--------YSLKPLIGRPFGSLFQIESGDNGQHLAC 86
I DGD +V R +++ + + L +IG +G+ F++ +G + Q
Sbjct: 20 IRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNIIGHSYGTTFEVTNGGSLQ---- 79
Query: 87 VTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDEIVEALI 146
+EE T E KE DNR ++D+ K+Q L+ +DI A++ +G G+EIV+ LI
Sbjct: 80 PKKKKEEPTSETKEAGT------DNRNIIDDGKSQKLTQDDIKALKDKGIKGEEIVQQLI 139
Query: 147 ANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALS 206
NS TF KT F+Q+KY KK+KKY + + +P TR + Y+ + P +I +R D L+
Sbjct: 140 ENSTTFRDKTEFAQDKYIKKKKKKYEAMITVVKPSTRILSVMYYAREPGKINHMRYDTLA 199
Query: 207 LLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVRMFNFDD 266
+L+ N+ + + ++V + GL+ GA+ ER+GG GS+ Y G P F F
Sbjct: 200 QMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGP-VRAATACFGFPK 259
Query: 267 EICARIMRSPLT--------------------DLTSSQVSNG----------EHEVTIKA 326
+ + PL D+ S + SNG E+E +I
Sbjct: 260 SFLSGLYEFPLNKVDSLLNGTFSAEMLSSEPKDIASVEESNGTLEEKQTSEQENEDSIAE 319
Query: 327 QDEASEPVNMDEGPLPS--TDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENG 386
E++ P + + S D S S + + + + K E E
Sbjct: 320 APESNHPEEQERMEIVSQDPDYKEPKESGSKKDYIQEKQRRQEEQKKRHLEAAALLSERN 379
Query: 387 FTSLIIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISE 436
LI+A+ + L+ LL VA S PF +Y QY +PL C KL+ I+L++SE
Sbjct: 380 ADGLIVAS-RFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSE 439
BLAST of CmoCh12G003620 vs. ExPASy Swiss-Prot
Match:
Q9UJA5 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Homo sapiens OX=9606 GN=TRMT6 PE=1 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 4.1e-46
Identity = 138/449 (30.73%), Postives = 212/449 (47.22%), Query Frame = 0
Query: 27 INDGDRLVFARLSPASTLKIGNKS--------YSLKPLIGRPFGSLFQIESGDNGQHLAC 86
I DGD +V R +++ + + L +IG +G+ F++ SG + Q
Sbjct: 20 IRDGDFVVLKREDVFKAVQVQRRKKVTFEKQWFYLDNVIGHSYGTAFEVTSGGSLQ---- 79
Query: 87 VTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDEIVEALI 146
REE T E KE DNR +VD+ K+Q L+ +DI A++ +G G+EIV+ LI
Sbjct: 80 PKKKREEPTAETKEAGT------DNRNIVDDGKSQKLTQDDIKALKDKGIKGEEIVQQLI 139
Query: 147 ANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALS 206
NS TF KT F+Q+KY KK+KKY + + +P TR + Y+ + P +I +R D L+
Sbjct: 140 ENSTTFRDKTEFAQDKYIKKKKKKYEAIITVVKPSTRILSIMYYAREPGKINHMRYDTLA 199
Query: 207 LLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVRMFNFDD 266
+L+ N+ + + ++V + GL+ GA+ ER+GG GS+ Y G P F F
Sbjct: 200 QMLTLGNIRAGNKMIVMETCAGLVLGAMMERMGGFGSIIQLYPGGGP-VRAATACFGFPK 259
Query: 267 EICARIMRSPLTDLTS------------------------------SQVSNGEHEVTIKA 326
+ + PL + S Q S E+E ++
Sbjct: 260 SFLSGLYEFPLNKVDSLLHGTFSAKMLSSEPKDSALVEESNGTLEEKQASEQENEDSMAE 319
Query: 327 QDEASEPVNMDEGPLPSTDQSSDLNSE--SIVSPLTKVLKCAKAGDKAPPEVVKSWKENG 386
E++ P + + S D E S + + + + K E E
Sbjct: 320 APESNHPEDQETMETISQDPEHKGPKERGSKKDYIQEKQRRQEEQRKRHLEAAALLSERN 379
Query: 387 FTSLIIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISE 436
LI+A+ + L+ LL VA S PF +Y QY +PL C KL+ I+L++SE
Sbjct: 380 ADGLIVAS-RFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLSE 439
BLAST of CmoCh12G003620 vs. ExPASy Swiss-Prot
Match:
Q6BKK7 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) OX=284592 GN=TRM6 PE=3 SV=2)
HSP 1 Score: 153.7 bits (387), Expect = 5.0e-36
Identity = 112/414 (27.05%), Postives = 205/414 (49.52%), Query Frame = 0
Query: 38 LSPASTLKIGN-KSYSLKPLIGRPFGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVV 97
L P + +G ++++ ++G PFG F+I + + +T +E + + + E++
Sbjct: 50 LKPGGIISLGKFGTFAVDGILGYPFGQTFEILEELKVKPIKSMTMQADETSVDNENEELT 109
Query: 98 KDEL-------RDNRALVDN--NKAQSLSSEDIDAMRSQGAT---GDEIVEALIANSATF 157
KD+L DN + N +K Q L+SED+D ++ GAT G I+E +IA F
Sbjct: 110 KDDLTKMLSNSSDNNQNIINIGSKIQKLTSEDVDKLKESGATSDIGQRIIEQMIAGHEGF 169
Query: 158 EKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFLRVDALSLLLSFA 217
+KKT+FSQ+KY +KQ+K+ R + + + + Y +K R+ + + L LLL++A
Sbjct: 170 DKKTLFSQQKYLKRKQQKFLRRFTVEYLGSSQLLQYYIEKDTQRVLDMSEETLGLLLNYA 229
Query: 218 NVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVRMFNFDDEICARI 277
NV L+ D GG+I A+ ER+ G+G++ + + +PN + + R ++ +E+ R+
Sbjct: 230 NVRPGGKYLLIDETGGIILYAMMERMNGQGTIVSAHDNEHPNHIAL-RYSDYPEEMQNRM 289
Query: 278 MRSPLTDLTSSQVSNGEHEVTIKAQDEASEPVNMDEGPLPSTDQSSDLNSESIVSPLTKV 337
++S + L + N + E ++E E + +Q + N S++
Sbjct: 290 VKS-INWLQFLEPENEKVEFETATEEEIEEMKHAKRAQYYRREQRAK-NINSVI------ 349
Query: 338 LKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQ 397
++V +GF S+ + L+ +++P + S P IY Q+ +
Sbjct: 350 ------------DMVMEGNFDGFISVSTLNMPT----LLPEIIPTIGGSRPVVIYSQFKE 409
Query: 398 PLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQMNAFGGYILSGTKI 439
L H + +K ++ I E +R +Q +P R HP M M FGGYIL GT++
Sbjct: 410 ALLETQHHMSTDKRVLAPSIMETRVRPHQTIPGRMHPVMCMRGFGGYILWGTRV 438
BLAST of CmoCh12G003620 vs. ExPASy TrEMBL
Match:
A0A6J1GI99 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucurbita moschata OX=3662 GN=LOC111454455 PE=3 SV=1)
HSP 1 Score: 875.5 bits (2261), Expect = 9.2e-251
Identity = 447/447 (100.00%), Postives = 447/447 (100.00%), Query Frame = 0
Query: 1 MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP 60
MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP
Sbjct: 1 MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP 60
Query: 61 FGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI 120
FGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI
Sbjct: 61 FGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI 120
Query: 121 DAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA 180
DAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA
Sbjct: 121 DAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA 180
Query: 181 YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTY 240
YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTY
Sbjct: 181 YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTY 240
Query: 241 LGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVSNGEHEVTIKAQDEASEPVNMDE 300
LGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVSNGEHEVTIKAQDEASEPVNMDE
Sbjct: 241 LGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVSNGEHEVTIKAQDEASEPVNMDE 300
Query: 301 GPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW 360
GPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW
Sbjct: 301 GPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW 360
Query: 361 GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH 420
GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH
Sbjct: 361 GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH 420
Query: 421 PFMQMNAFGGYILSGTKICDVAHQQAI 448
PFMQMNAFGGYILSGTKICDVAHQQAI
Sbjct: 421 PFMQMNAFGGYILSGTKICDVAHQQAI 447
BLAST of CmoCh12G003620 vs. ExPASy TrEMBL
Match:
A0A6J1KL25 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucurbita maxima OX=3661 GN=LOC111496211 PE=3 SV=1)
HSP 1 Score: 856.7 bits (2212), Expect = 4.4e-245
Identity = 438/444 (98.65%), Postives = 438/444 (98.65%), Query Frame = 0
Query: 1 MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP 60
MSSSNL SESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP
Sbjct: 1 MSSSNLPSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP 60
Query: 61 FGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI 120
FGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI
Sbjct: 61 FGSLFQIESGDNGQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDI 120
Query: 121 DAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA 180
DAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA
Sbjct: 121 DAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEA 180
Query: 181 YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTY 240
YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCN Y
Sbjct: 181 YFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNAY 240
Query: 241 LGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVSNGEHEVTIKAQDEASEPVNMDE 300
LGSNPNPMEIVRMFNFDDEICARIMRSPLTDL SSQVSNGEHEV IKAQDEASEPVNMDE
Sbjct: 241 LGSNPNPMEIVRMFNFDDEICARIMRSPLTDLASSQVSNGEHEVNIKAQDEASEPVNMDE 300
Query: 301 GPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW 360
GP PSTDQSS LNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW
Sbjct: 301 GPPPSTDQSSGLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAW 360
Query: 361 GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH 420
GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH
Sbjct: 361 GLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTH 420
Query: 421 PFMQMNAFGGYILSGTKICDVAHQ 445
PFMQMNAFGGYILSGTKICDVAHQ
Sbjct: 421 PFMQMNAFGGYILSGTKICDVAHQ 444
BLAST of CmoCh12G003620 vs. ExPASy TrEMBL
Match:
A0A0A0LRN2 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucumis sativus OX=3659 GN=Csa_2G367740 PE=3 SV=1)
HSP 1 Score: 760.0 bits (1961), Expect = 5.6e-216
Identity = 390/450 (86.67%), Postives = 415/450 (92.22%), Query Frame = 0
Query: 1 MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP 60
MS + LQSES RNPR+ WEGCSVLLD+NDGDRLVFARLSPASTLKIGNKS+SLKPLIG P
Sbjct: 1 MSLTILQSESRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCP 60
Query: 61 FGSLFQIESGDNGQHLACVTPSREE------ETEEMKEEQVVKDELRDNRALVDNNKAQS 120
FGSLFQIE+G NG LA V PSREE ETEEMKEEQV KDELRDNRA+VDNNKAQS
Sbjct: 61 FGSLFQIENGGNGPELARVMPSREEEGISCQETEEMKEEQVTKDELRDNRAIVDNNKAQS 120
Query: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
LSSEDIDAMRSQGATGDEIVEALIANSATF+KKTVFSQEKYRLKKQKKYAPRVLLRRPFT
Sbjct: 121 LSSEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLKKQKKYAPRVLLRRPFT 180
Query: 181 RSICEAYFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKG 240
RSICEAYFKK+PARIGFLR+DALSLLLSF NVT+NSDVLV DMVGGL+TGAVAERLGGKG
Sbjct: 181 RSICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKG 240
Query: 241 SVCNTYLGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVS----NGEHEVTIKAQD 300
SVCNTY+G+ PNPM+IVR+FNFDDEIC+RIMRS L DLTSSQ+ NGE+E +I Q+
Sbjct: 241 SVCNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENEDSINVQE 300
Query: 301 EASEPVNMDEGPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSL 360
+AS+PV+MDE PLPSTDQSSDLNSESIVSPLTKV KCAKAGDKAPPEV+ WKENGFTSL
Sbjct: 301 QASQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSL 360
Query: 361 IIAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLR 420
IIAAPQSDAW LVKDLLPLVANSAPFAIYHQY+QPLATCMHKLQLEKMAISLQISEPWLR
Sbjct: 361 IIAAPQSDAWSLVKDLLPLVANSAPFAIYHQYVQPLATCMHKLQLEKMAISLQISEPWLR 420
Query: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICD 441
EYQVLPSRTHPFMQMNAFGGYILSGTKICD
Sbjct: 421 EYQVLPSRTHPFMQMNAFGGYILSGTKICD 450
BLAST of CmoCh12G003620 vs. ExPASy TrEMBL
Match:
A0A6J1CS60 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Momordica charantia OX=3673 GN=LOC111014079 PE=3 SV=1)
HSP 1 Score: 757.3 bits (1954), Expect = 3.6e-215
Identity = 392/448 (87.50%), Postives = 412/448 (91.96%), Query Frame = 0
Query: 1 MSSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRP 60
MSS NLQSE RNPRV WEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIG P
Sbjct: 1 MSSDNLQSELHRNPRVTWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGCP 60
Query: 61 FGSLFQIESGDNGQHLACVTPSREE-----ETEEMKEEQVVKDELRDNRALVDNNKAQSL 120
FGSLFQIE+ G HL+ V PSREE ETE+MKEEQV KDELRDNRA+VDNNKAQSL
Sbjct: 61 FGSLFQIENVAGGPHLSRVMPSREEGINCQETEKMKEEQVTKDELRDNRAIVDNNKAQSL 120
Query: 121 SSEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTR 180
SSEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRL+KQKKYAPRVL+RRPFTR
Sbjct: 121 SSEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLRKQKKYAPRVLVRRPFTR 180
Query: 181 SICEAYFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGS 240
SICEAYFKK+PARIGFLRVDALSLLLSFANVTSNSDVLV DMVGGL+TGAVAERLGGKGS
Sbjct: 181 SICEAYFKKYPARIGFLRVDALSLLLSFANVTSNSDVLVLDMVGGLLTGAVAERLGGKGS 240
Query: 241 VCNTYLGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQV----SNGEHEVTIKAQDE 300
VCNTYLG+NPN M+IVR+FNFDDEICARIMRSPL DL SSQV SNGEHE +I A+++
Sbjct: 241 VCNTYLGNNPNHMDIVRIFNFDDEICARIMRSPLIDLASSQVDSSKSNGEHEASINAEEQ 300
Query: 301 ASEPVNMDEGPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLI 360
ASEPV+MDE +PSTDQ S+LNSESIVSPLTK KCAKAGDKAP EVV SWKENGFTSLI
Sbjct: 301 ASEPVSMDESAVPSTDQPSELNSESIVSPLTKAFKCAKAGDKAPSEVVNSWKENGFTSLI 360
Query: 361 IAAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLRE 420
IAAPQ DAW LVKDLLPLV+NSAPFAIYHQYLQPLATCMHKLQLE+MAISLQISEPWLRE
Sbjct: 361 IAAPQLDAWSLVKDLLPLVSNSAPFAIYHQYLQPLATCMHKLQLERMAISLQISEPWLRE 420
Query: 421 YQVLPSRTHPFMQMNAFGGYILSGTKIC 440
YQVLPSRTHPFMQMNAFGGYILSGTKIC
Sbjct: 421 YQVLPSRTHPFMQMNAFGGYILSGTKIC 448
BLAST of CmoCh12G003620 vs. ExPASy TrEMBL
Match:
A0A1S3BB68 (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucumis melo OX=3656 GN=LOC103488037 PE=3 SV=1)
HSP 1 Score: 748.0 bits (1930), Expect = 2.2e-212
Identity = 385/448 (85.94%), Postives = 415/448 (92.63%), Query Frame = 0
Query: 2 SSSNLQSESPRNPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRPF 61
S++ LQS+S RNPR+ WEGCSVLLD+NDGDRLVFARLSPASTLKIGNKS+SLKPLIG PF
Sbjct: 3 STTILQSDSRRNPRLTWEGCSVLLDVNDGDRLVFARLSPASTLKIGNKSFSLKPLIGCPF 62
Query: 62 GSLFQIESGDNGQHLACVTPSREE-----ETEEMKEEQVVKDELRDNRALVDNNKAQSLS 121
GSLFQIE+G+NG LA V PSREE ETEEMKEEQV KDELRDNRALVDNNKAQSLS
Sbjct: 63 GSLFQIENGENGPQLARVMPSREEGINCQETEEMKEEQVTKDELRDNRALVDNNKAQSLS 122
Query: 122 SEDIDAMRSQGATGDEIVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRS 181
SEDIDAMRSQGATGDEIVEALIANSATF+KKTVFSQEKYRL+KQKKYAPRVLLRRPFTRS
Sbjct: 123 SEDIDAMRSQGATGDEIVEALIANSATFDKKTVFSQEKYRLRKQKKYAPRVLLRRPFTRS 182
Query: 182 ICEAYFKKFPARIGFLRVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSV 241
ICEAYFKK+PARIGFLR+DALSLLLSF NVT+NSDVLV DMVGGL+TGAVAERLGGKGSV
Sbjct: 183 ICEAYFKKYPARIGFLRLDALSLLLSFGNVTANSDVLVVDMVGGLLTGAVAERLGGKGSV 242
Query: 242 CNTYLGSNPNPMEIVRMFNFDDEICARIMRSPLTDLTSSQVS----NGEHEVTIKAQDEA 301
CNTY+G+ PNPM+IVR+FNFDDEIC+RIMRS L DLTSSQ+ NGE++V+ ++A
Sbjct: 243 CNTYVGNTPNPMDIVRIFNFDDEICSRIMRSSLADLTSSQIEPTKPNGENKVS----EQA 302
Query: 302 SEPVNMDEGPLPSTDQSSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLII 361
S+PV+MDE PLPSTDQSSDLNSESIVSPLTKV KCAKAGDKAPPEV+ WKENGFTSLII
Sbjct: 303 SQPVSMDESPLPSTDQSSDLNSESIVSPLTKVFKCAKAGDKAPPEVINLWKENGFTSLII 362
Query: 362 AAPQSDAWGLVKDLLPLVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREY 421
AAPQSDAW LVKDLLPLVA+SAPFAIYHQYLQPLATCMHKLQLEKMAI+LQISEPWLREY
Sbjct: 363 AAPQSDAWRLVKDLLPLVASSAPFAIYHQYLQPLATCMHKLQLEKMAINLQISEPWLREY 422
Query: 422 QVLPSRTHPFMQMNAFGGYILSGTKICD 441
QVLPSRTHPFMQMNAFGGYILSGTKICD
Sbjct: 423 QVLPSRTHPFMQMNAFGGYILSGTKICD 446
BLAST of CmoCh12G003620 vs. TAIR 10
Match:
AT2G45730.1 (eukaryotic initiation factor 3 gamma subunit family protein )
HSP 1 Score: 528.5 bits (1360), Expect = 5.3e-150
Identity = 271/430 (63.02%), Postives = 338/430 (78.60%), Query Frame = 0
Query: 13 NPRVAWEGCSVLLDINDGDRLVFARLSPASTLKIGNKSYSLKPLIGRPFGSLFQIESGDN 72
NPR A EGCSVLLDINDGDRLVFARLS + LKIGNK+YSLKPLIG PFGSLFQ+E+G++
Sbjct: 20 NPRFACEGCSVLLDINDGDRLVFARLSSGAILKIGNKNYSLKPLIGAPFGSLFQVETGED 79
Query: 73 GQHLACVTPSREEETEEMKEEQVVKDELRDNRALVDNNKAQSLSSEDIDAMRSQGATGDE 132
G L+ + P ++E V D+ RDNR +VDNN+AQ+L+ E+I+AMR +GA GDE
Sbjct: 80 GSFLSRILPIKQESNSNN-----VMDDSRDNREIVDNNEAQNLTGEEIEAMRREGAKGDE 139
Query: 133 IVEALIANSATFEKKTVFSQEKYRLKKQKKYAPRVLLRRPFTRSICEAYFKKFPARIGFL 192
I+EALIANS TF+KK SQEKY+LKKQKKYAP++LLRRPF RSICEAYFKK+PARIGFL
Sbjct: 140 IIEALIANSKTFDKKFQLSQEKYKLKKQKKYAPKLLLRRPFARSICEAYFKKYPARIGFL 199
Query: 193 RVDALSLLLSFANVTSNSDVLVFDMVGGLITGAVAERLGGKGSVCNTYLGSNPNPMEIVR 252
RVDALSLLL+ ANVT+ SDVLV DMVGGL+TGAVAERLGG G VCNTY GS+P P+E+VR
Sbjct: 200 RVDALSLLLTMANVTAYSDVLVVDMVGGLVTGAVAERLGGTGYVCNTYKGSSPYPVEMVR 259
Query: 253 MFNFDDEICARIMRSPLTDLTSSQVS----NGEHEVTIKAQDEASEPVNMDEGPLPSTDQ 312
MFNF D++ RI++S + +L+S++ + N + E KA++ +E D +
Sbjct: 260 MFNFSDKVLKRIVQSSINELSSAKTASTEGNNQQEGVCKAENNINETATSDV-MVEEISV 319
Query: 313 SSDLNSESIVSPLTKVLKCAKAGDKAPPEVVKSWKENGFTSLIIAAPQSDAWGLVKDLLP 372
+++ IV P +K++K AKAG KA E ++ W+ENGF+SLI+AA D W + KD+LP
Sbjct: 320 TTEAGVVDIVVPESKIIKAAKAGAKASKETIEMWQENGFSSLIMAAQDQDPWIVAKDVLP 379
Query: 373 LVANSAPFAIYHQYLQPLATCMHKLQLEKMAISLQISEPWLREYQVLPSRTHPFMQMNAF 432
L++ SAPFAIYHQYLQPLATCMHKLQ KMAI+LQI+EPWLREYQVLPSR+HP MQM++F
Sbjct: 380 LLSYSAPFAIYHQYLQPLATCMHKLQQGKMAINLQITEPWLREYQVLPSRSHPHMQMSSF 439
Query: 433 GGYILSGTKI 439
GGY+LSG +I
Sbjct: 440 GGYVLSGIRI 443
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q54UB1 | 4.1e-54 | 33.33 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 OS=Dictyost... | [more] |
Q8CE96 | 9.7e-48 | 30.62 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Mus musc... | [more] |
Q2T9V5 | 1.3e-47 | 30.73 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Bos taur... | [more] |
Q9UJA5 | 4.1e-46 | 30.73 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Homo sap... | [more] |
Q6BKK7 | 5.0e-36 | 27.05 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Debaryom... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GI99 | 9.2e-251 | 100.00 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucurbit... | [more] |
A0A6J1KL25 | 4.4e-245 | 98.65 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucurbit... | [more] |
A0A0A0LRN2 | 5.6e-216 | 86.67 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucumis ... | [more] |
A0A6J1CS60 | 3.6e-215 | 87.50 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Momordic... | [more] |
A0A1S3BB68 | 2.2e-212 | 85.94 | tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G45730.1 | 5.3e-150 | 63.02 | eukaryotic initiation factor 3 gamma subunit family protein | [more] |