CmoCh12G003590 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G003590
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr12: 2228553 .. 2231052 (-)
RNA-Seq ExpressionCmoCh12G003590
SyntenyCmoCh12G003590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACGATCGCTTGATGCATCGAAGTCGGATTTCAACACGAGTTTGAAGGAGAGAGACGCTTTTCTTTGTCAAATTATATCAGGTTTTTTTTGTAGGTGTTGACATTGTTGCATTTCACTCGATCGATATTTTTGTTATGTTGCCGAAATGACGAACAACGAGTTGCAAGATTTCAAACAATTTTTAGCCCTCTCTCTGCTAAAACCACCGATCTGTATGTTTGCGATCCAATATCTTTTAAATTCTTCAATGTTTTCTTTTTGAACTTTATAGTTGTAACTTTCAAATAGTTTCAGGATGTTTCTTCAAGAAGTTCATTATAGGTTGGAAAATCTAACGAAAACGAAATTCCAAGACCTAGAGTTGCGAGATGCAGAGATTACGAGAAACGCTAGCATCCGAAAGGAGCTCTGAAAATCTTCTTGGCATAATCGTGCAGAGATTGAAAATCTTCTTGCTAATATGGAAGAACTTCAATCTTCGAATAATGAAAAGGATTGCACAAAAAGCAGGCTTAGAAAGTAAGTTGGAAAAGATTGAGGTTGATTCTAGAAAATTAAACGATGATTTTGGTAGAATCTTTCATGAGTTGGAAGTCTCAAGAAAGCATACTGGCGCATCGGTGTTAAACCGATGCACATCTGGCTAGAAAACCTATGGCTTAGGAGTGAAGGAAAAAGAAAAGCATCTTCTGCACAAGCACCTCGTGGCAATGGAGATTCTGGAAAGGTAAGAATTTCTTGTCTTGTTGCTTCAGCTATTACTCCTAGGCTCTGTTGTTCTCTTTATCTAAGTTTGAAGTTCTGTGTGCATATGATCCATTTATCAACTATAGCTATCCATTTCCAATTTCATTTTTTAGGAATGAGATGCTCATATTGCTCCAGTACAATTGTAATCTATATGAAACATGGGTCCTGAAAGAGAAACCTAGAACAAAGCAGAACTAAAGTTTACTACTAGTACACACTGAGATTAAAAGAAAGTAAGAAACGTAACCAAAGCCCCACTTTTCCTCAAGGGTTTAAAACGCGTCTACTAGGGAGAGATTTGCATACCCTTTTAAGGACTGTTTCGTTCTCCTCTTCAATCGATGTGGGATATCACAATCCACCCTTTTGAGGGCTTAGCGTCCTATTACCCAGTATTTGATTCTGATACCATTTGTAGCGGCTCAAGCCCACTGATTGTAGTCCAAGTCCACTCTTATAATGAATGATTCATTCCCCTCCAAACGAATAGAGAAGAGATTGAGAGATTTTTGCCTAAATGAATATGCCTTTTTACCTCATGCCTGTGATCTCTCAATAATGTCAAATTTGTGAGCAATTAAGATAGACTGACTTAAACTGATATCACAATGAAAGAATATTGTGAATGGACAATCCATCTAGGCTGGTTAGATGTGGTTAGATGTAGTGATCGTGTATTCTTCTTCCTTCGGCTCTCCACGGTGATATGATATTGTCCACTTTAAGCATAATCTTTTGTGACTTTACTTTTGGTTTACCCAAGAGGCCTCGTACCAATAGAGATGTATTCTTTATTTATAAATCCATGATCAACCCCTTAATTAGCTGATATGAGACTCCTCTCCCAACAATCCTTAACAATAACATGTTACGTTTTTTGGTTATTAGGAGGACGGGAGCTTAAAACAGAAGAAAGACGTCGAAAGTGAATCAAAGACCCCTTTCAAATCTCACAAATTAAGGAGCAGCATGCATGTGTAAGTTAGTACTCTCACAACATATTTGTGGAATTATTGAGAAGGTAGCAATTAAGAGGAACATACTGCAGGGAACAACGCAAAGCCAAAGCATCACAGCCTAATAATAATACGGTCTCCATATTGATGGAAACCATTTAGAGTGGAAGTAAGGCTGATAAGATATCAAAACCAACAACACCACCAGCAACGCCGCCGCACCCCAAGGTGAGGCAGCGGTGCCTTCTGCGACGTATACCGGCTCGAGCTTTGTTCTCGGAGTGATGATTACAAGACGACCATATCTAACAATCGAGTTTCCAACAAACACAAACACTAGAGGTAATAACAAGAAAAAGATCTTGAAATTGACCTTTGTTCTTTTCACCTGGGATCTGTAGCTTGAATATGATGACACAGATAGCAAAATGACCAAGATTCCAAGAACAGCAAGCAGAGGCCTTGGCGGAGGAGCTATGGAGGCCAAGGCCTGCTCTGCCCATCCTTGTTTCCATGATGGGCCTCTCCTCTCTCTTATCAACCAACCCATTGTTCTTCTCTCTGTTGTTTGAGCTTGGGGAATTCAGAAGAATAGTGGTCGTATATATATAGAAAGAGAGAGAGATGAAGATTGTTTGTTAATTTGCTTTGGCATAAATTCTGTGGGGCCAATTGGTTCTTTCTCCATTTCACCTGTTTCTGATTCGACTTCACCGAATTGGCACCAGTGCCAATTCCTTCGTAGTTTTCAATCATTTATCCTCTTATTTTTTTCCATCTGGAAAGGCC

mRNA sequence

ATGGAACGATCGCTTGATGCATCGAAGTCGGATTTCAACACGAGTTTGAAGGAGAGAGACGCTTTTCTTTGTCAAATTATATCAGAGATTGAAAATCTTCTTGCTAATATGGAAGAACTTCAATCTTCGAATAATGAAAAGGATTGCACAAAAAGCAGGCTTAGAAAGAGTGAAGGAAAAAGAAAAGCATCTTCTGCACAAGCACCTCGTGGCAATGGAGATTCTGGAAAGGAGGACGGGAGCTTAAAACAGAAGAAAGACGTCGAAAGTGAATCAAAGACCCCTTTCAAATCTCACAAATTAAGGAGCAGCATGCATGTGTAAGTTAGTACTCTCACAACATATTTGTGGAATTATTGAGAAGGTAGCAATTAAGAGGAACATACTGCAGGGAACAACGCAAAGCCAAAGCATCACAGCCTAATAATAATACGGTCTCCATATTGATGGAAACCATTTAGAGTGGAAGTAAGGCTGATAAGATATCAAAACCAACAACACCACCAGCAACGCCGCCGCACCCCAAGGTGAGGCAGCGGTGCCTTCTGCGACGTATACCGGCTCGAGCTTTGTTCTCGGAGTGATGATTACAAGACGACCATATCTAACAATCGAGTTTCCAACAAACACAAACACTAGAGGTAATAACAAGAAAAAGATCTTGAAATTGACCTTTGTTCTTTTCACCTGGGATCTGTAGCTTGAATATGATGACACAGATAGCAAAATGACCAAGATTCCAAGAACAGCAAGCAGAGGCCTTGGCGGAGGAGCTATGGAGGCCAAGGCCTGCTCTGCCCATCCTTGTTTCCATGATGGGCCTCTCCTCTCTCTTATCAACCAACCCATTGTTCTTCTCTCTGTTGTTTGAGCTTGGGGAATTCAGAAGAATAGTGGTCGTATATATATAGAAAGAGAGAGAGATGAAGATTGTTTGTTAATTTGCTTTGGCATAAATTCTGTGGGGCCAATTGGTTCTTTCTCCATTTCACCTGTTTCTGATTCGACTTCACCGAATTGGCACCAGTGCCAATTCCTTCGTAGTTTTCAATCATTTATCCTCTTATTTTTTTCCATCTGGAAAGGCC

Coding sequence (CDS)

ATGGAACGATCGCTTGATGCATCGAAGTCGGATTTCAACACGAGTTTGAAGGAGAGAGACGCTTTTCTTTGTCAAATTATATCAGAGATTGAAAATCTTCTTGCTAATATGGAAGAACTTCAATCTTCGAATAATGAAAAGGATTGCACAAAAAGCAGGCTTAGAAAGAGTGAAGGAAAAAGAAAAGCATCTTCTGCACAAGCACCTCGTGGCAATGGAGATTCTGGAAAGGAGGACGGGAGCTTAAAACAGAAGAAAGACGTCGAAAGTGAATCAAAGACCCCTTTCAAATCTCACAAATTAAGGAGCAGCATGCATGTGTAA

Protein sequence

MERSLDASKSDFNTSLKERDAFLCQIISEIENLLANMEELQSSNNEKDCTKSRLRKSEGKRKASSAQAPRGNGDSGKEDGSLKQKKDVESESKTPFKSHKLRSSMHV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 30..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..98

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G003590.1CmoCh12G003590.1mRNA