CmoCh12G003570 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G003570
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Tubulin beta chain
Location	Cmo_Chr12: 2218996 .. 2222214 (+)
RNA-Seq Expression	CmoCh12G003570
Synteny	CmoCh12G003570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATAATGGATACTCTCGCCTTCATGTTCTTCGCGTCGATCCATTTTCATCAAAACAAGAGGCCTTTCAGTTTTCCATTTCCTTCAAACAAGACACCATGAGAGAAATCCTTCACGTTCAAGGTGGCCAATGCGGCAACCAAATCGGATCCAAGTTCTGGGAAGTGATCTGCGATGAGCACGGCATCGACGCCACTGGAAAATACAACGGCGATCCTTCTTCTGATCTTCAATTGGAGAGGATCAATGTCTATTACAATGAGGCTTCTGGCGGCAGATACGTTCCCAGGGCTGTTCTCATGGATCTTGAGCCCGGTACCATGGATAGTATCAGATCCGGTCCCTACGGTCAGATCTTTCGCCCCGATAATTTTGTTTTTGGCCAGTCCGGTGCTGGAAATAATTGGGCCAAGGGACATTACACTGAAGGAGCGGAGTTGATTGATTCCGTTCTTGATGTTGTTCGTAAGGAGGCCGAGAACTGTGATTGCTTGCAAGGTATGGCATTCTCTGCTCTGTTCTTCGATTATACATTCTGATTAAACTGCTTTCTGATTCGAAGGAATACGTTCGTTTCGATTGAATCATTTGTGAATCCTACTTTTACATCCTGATTTTACTGCTTCATGAATCCTTTCGTTTCGATTGAACACGTGCTTACATTCCGAATTTCTGATTACACTGCTTCATGAATTGAAAGAATCTGTTCGTTTTGATTGAATCTTGACCTGCATTCTGATTATACTGCTTCAGGAATTGAATGAATCTTTTCGTTTCTATTGAACTATTCGCGAATCGCATTTTATGCGTCGAAAATCTTCGTGTTCGTCAAATTTCCTGAATACTTTTCAGTCCAATATTCTCTGGTATATCCAACGCATGTGAAAGACTTTTCGTTGTTCTTATCGAATTTTTGGCTTAAAGTTCAAAAAACGATCAAATATCGTCGGATTTCATTTTCCTCGAAGCAAGATAAGACTAGAGGGCATGAACAACAAAAATATCTCCATTATTGACGTGAGAAACGGGAGATGATAAAATTGAGAAATCAACTGTTCTGATTTCCTTCATATTGTTAATATTATTAGTAAAGTAGAAGGAGAAAGTGATGGTTGCTGTAACCTTTCTCAGATCCATATCCGCTACCTACTTAATTTGCTTTGGCAACATCACACAGTTGGCTGTTCTTTAAATCTCCGACAATTTTATTTGTTCTTCCTTGAAAAACACGATTATTTGCTTTTCTTCTTTTAAACAACTGAAATTAAGTTCATCAATCTTGATTTGCTAACTGCTAATTCTCCTCGCCATTTACTGCCTTCTTCACTCTAATTGGAAAGATGGGATACCAAATTTTGTCCATACCCAAAAATATACTTAGAGATTAAACAAACAGGAAAGGATCCTCTACCACGTTTGGTATTGCAATTACAACTGGCTTTTAACATCCTCAACAATACTAATAATTGCCTTCTTTCTATTAATTAAAGCTTTCATGAATTACTGTTCTTTACGATCATGATCTGGTTTTTTTACTGAGCTATATGATTTGTGTGGTTTGTGAAGGGGACAATGTTGGGTGGTGAGTCGGTCCCACATTTGTCTCATGCATTTAATCCATTGGAATATTTTATTCCACCTATTTCAACTTGAAATAAAAGAATGCCAACTTTAATGGTCAGAAAATATTATTTTTTCTCACTCCCACCACTCCATGATTGGATAATTGTCGTACTCTGGAGCTACCGTACCGACACTACCTTTTCTTATCAAAATGAATAGCGTTCATGAATAGTGATCACATTGAGATAAATTACAATGCAACTATAAATTGCAGTAAAAGTGAAAACATGACCTTTTTACTTCCAAGATCTTAATATTTGACATATTACTTGCTGCAGAAAAGTGGTGTGACAGACGGGGATTAGAGTTCTATCATTCATGCTGTAGATTTTTTGAATGGCTCTAATATGGGGATGCCCAAGAAACAAATTGTTAACCATTTTTCCTATTTCTATTTGTTTATAGCTTATCCCAAGTGGGGTTTGTGTAAATAATGTGTTTACCATGGTAGAACAGCAATATTTTTCCCATCTCTTAATTAAATTGGTCAAGTTTGTTGTCCTTTGCTTGTGTGCCAGGCTTTCAGGTTTGTCACTCTCTTGGAGGAGGCACTGGTTCTGGCATGGGAACCCTATTGATATCGAAGATTAGAGAAGAGTATCCGGATAGGATGATGCTCACCTTCTCGGTTTTCCCTTCTCCCAAGGTTTCAGACACGGTTGTGGAACCATATAATGCCACTCTTTCAGTGCATCAGCTGGTTGAGAATGCTGATGAATGCATGGTTCTTGATAATGAAGCTCTTTATGACATTTGCTTCAGAACCTTAAAGCTCAGCACTCCTAGCTGTAACCTCTCTCTCTCTCTCTCTCTCTCTTAGATGTTTTTCAAAGAAACACTACTGATGAGCTAATTTCCTCGTAGAATACTCTGTTTTAGCATTTTCATAAACTCAATATCTGTTTTGTTTGTATGAACAGTCGGTGACCTAAACCATTTGATCTCTGCAACCATGAGTGGAGTAACATGTTGCTTGAGATTCCCAGGTCAATTGAACTCAGACCTGAGGAAATTGGCAGTGAATTTGATCCCATTTCCCCGTCTTCACTTCTTCATGGTTGGATTTGCTCCTCTGACCTCCCGTGGCTCTCAGCAGTACATCTCCCTCACCGTCCCCGAGCTGACCCAGCAAATGTGGGACGCCAAGAACATGATGTGCGCCGCCGACCCCCGCCACGGCCGCTACCTGACAGCCTCTGCAATGTTCAGAGGAAGAATGAGCACCAAAGAAGTAGACGAACAGATGATCAATGTACAGAACAAAAACTCATCATACTTCGTGGAATGGATCCCAAACAACGTGAAATCAAGCGTTTGTGACATCCCTCCAAAGGGTCTGAAAATGGCGTCCACATTCGTCGGAAACTCGACCTCCATTCAGGAGATGTTCAGAAGGGTGAGCGAGCAGTTCACGGCCATGTTCAGGCGGAAGGCTTTCCTGCATTGGTACACAGGTGAAGGAATGGATGAAATGGAGTTTACAGAGGCGGAGAGTAATATGAATGATTTGGTTGCTGAGTATCAACAGTATCAGGATGCCACCGTTGATGATGAAGCTGATTTTGAGGATCATGAAGAAGAGTATGCCGAGCAGTAG

mRNA sequence

TTATAATGGATACTCTCGCCTTCATGTTCTTCGCGTCGATCCATTTTCATCAAAACAAGAGGCCTTTCAGTTTTCCATTTCCTTCAAACAAGACACCATGAGAGAAATCCTTCACGTTCAAGGTGGCCAATGCGGCAACCAAATCGGATCCAAGTTCTGGGAAGTGATCTGCGATGAGCACGGCATCGACGCCACTGGAAAATACAACGGCGATCCTTCTTCTGATCTTCAATTGGAGAGGATCAATGTCTATTACAATGAGGCTTCTGGCGGCAGATACGTTCCCAGGGCTGTTCTCATGGATCTTGAGCCCGGTACCATGGATAGTATCAGATCCGGTCCCTACGGTCAGATCTTTCGCCCCGATAATTTTGTTTTTGGCCAGTCCGGTGCTGGAAATAATTGGGCCAAGGGACATTACACTGAAGGAGCGGAGTTGATTGATTCCGTTCTTGATGTTGTTCGTAAGGAGGCCGAGAACTGTGATTGCTTGCAAGCTTATCCCAAGTGGGGCTTTCAGGTTTGTCACTCTCTTGGAGGAGGCACTGGTTCTGGCATGGGAACCCTATTGATATCGAAGATTAGAGAAGAGTATCCGGATAGGATGATGCTCACCTTCTCGGTTTTCCCTTCTCCCAAGGTTTCAGACACGGTTGTGGAACCATATAATGCCACTCTTTCAGTGCATCAGCTGGTTGAGAATGCTGATGAATGCATGGTTCTTGATAATGAAGCTCTTTATGACATTTGCTTCAGAACCTTAAAGCTCAGCACTCCTAGCTTCGGTGACCTAAACCATTTGATCTCTGCAACCATGAGTCAATTGAACTCAGACCTGAGGAAATTGGCAGTGAATTTGATCCCATTTCCCCGTCTTCACTTCTTCATGGTTGGATTTGCTCCTCTGACCTCCCGTGGCTCTCAGCAGTACATCTCCCTCACCGTCCCCGAGCTGACCCAGCAAATGTGGGACGCCAAGAACATGATGTGCGCCGCCGACCCCCGCCACGGCCGCTACCTGACAGCCTCTGCAATGTTCAGAGGAAGAATGAGCACCAAAGAAGTAGACGAACAGATGATCAATGTACAGAACAAAAACTCATCATACTTCGTGGAATGGATCCCAAACAACGTGAAATCAAGCGTTTGTGACATCCCTCCAAAGGGTCTGAAAATGGCGTCCACATTCGTCGGAAACTCGACCTCCATTCAGGAGATGTTCAGAAGGGTGAGCGAGCAGTTCACGGCCATGTTCAGGCGGAAGGCTTTCCTGCATTGGTACACAGGTGAAGGAATGGATGAAATGGAGTTTACAGAGGCGGAGAGTAATATGAATGATTTGGTTGCTGAGTATCAACAGTATCAGGATGCCACCGTTGATGATGAAGCTGATTTTGAGGATCATGAAGAAGAGTATGCCGAGCAGTAG

Coding sequence (CDS)

ATGAGAGAAATCCTTCACGTTCAAGGTGGCCAATGCGGCAACCAAATCGGATCCAAGTTCTGGGAAGTGATCTGCGATGAGCACGGCATCGACGCCACTGGAAAATACAACGGCGATCCTTCTTCTGATCTTCAATTGGAGAGGATCAATGTCTATTACAATGAGGCTTCTGGCGGCAGATACGTTCCCAGGGCTGTTCTCATGGATCTTGAGCCCGGTACCATGGATAGTATCAGATCCGGTCCCTACGGTCAGATCTTTCGCCCCGATAATTTTGTTTTTGGCCAGTCCGGTGCTGGAAATAATTGGGCCAAGGGACATTACACTGAAGGAGCGGAGTTGATTGATTCCGTTCTTGATGTTGTTCGTAAGGAGGCCGAGAACTGTGATTGCTTGCAAGCTTATCCCAAGTGGGGCTTTCAGGTTTGTCACTCTCTTGGAGGAGGCACTGGTTCTGGCATGGGAACCCTATTGATATCGAAGATTAGAGAAGAGTATCCGGATAGGATGATGCTCACCTTCTCGGTTTTCCCTTCTCCCAAGGTTTCAGACACGGTTGTGGAACCATATAATGCCACTCTTTCAGTGCATCAGCTGGTTGAGAATGCTGATGAATGCATGGTTCTTGATAATGAAGCTCTTTATGACATTTGCTTCAGAACCTTAAAGCTCAGCACTCCTAGCTTCGGTGACCTAAACCATTTGATCTCTGCAACCATGAGTCAATTGAACTCAGACCTGAGGAAATTGGCAGTGAATTTGATCCCATTTCCCCGTCTTCACTTCTTCATGGTTGGATTTGCTCCTCTGACCTCCCGTGGCTCTCAGCAGTACATCTCCCTCACCGTCCCCGAGCTGACCCAGCAAATGTGGGACGCCAAGAACATGATGTGCGCCGCCGACCCCCGCCACGGCCGCTACCTGACAGCCTCTGCAATGTTCAGAGGAAGAATGAGCACCAAAGAAGTAGACGAACAGATGATCAATGTACAGAACAAAAACTCATCATACTTCGTGGAATGGATCCCAAACAACGTGAAATCAAGCGTTTGTGACATCCCTCCAAAGGGTCTGAAAATGGCGTCCACATTCGTCGGAAACTCGACCTCCATTCAGGAGATGTTCAGAAGGGTGAGCGAGCAGTTCACGGCCATGTTCAGGCGGAAGGCTTTCCTGCATTGGTACACAGGTGAAGGAATGGATGAAATGGAGTTTACAGAGGCGGAGAGTAATATGAATGATTTGGTTGCTGAGTATCAACAGTATCAGGATGCCACCGTTGATGATGAAGCTGATTTTGAGGATCATGAAGAAGAGTATGCCGAGCAGTAG

Protein sequence

MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ

Homology

[Close]

BLAST of CmoCh12G003570 vs. ExPASy Swiss-Prot
Match: P12411 (Tubulin beta-1 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 839.0 bits (2166), Expect = 2.5e-242
Identity = 414/452 (91.59%), Postives = 429/452 (94.91%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHG+D TG+YNGD S+DLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPP G+KMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAE 443
           NMNDLV+EYQQYQDAT D+E ++++ EE+  E
Sbjct: 421 NMNDLVSEYQQYQDATADEEDEYDEEEEQVYE 446

[Close]

BLAST of CmoCh12G003570 vs. ExPASy Swiss-Prot
Match: Q6VAF6 (Tubulin beta-6 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 838.2 bits (2164), Expect = 4.3e-242
Identity = 410/447 (91.72%), Postives = 425/447 (95.08%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHG+D TGKYNGD SSD+QLERI+VYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGKYNGDGSSDIQLERIDVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGP GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPIGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMM+TFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY+SLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPP+GLK +STF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPRGLKTSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHE 438
           NMNDLVAEYQQYQDATV+DE ++E  E
Sbjct: 421 NMNDLVAEYQQYQDATVEDEEEYEGEE 442

[Close]

BLAST of CmoCh12G003570 vs. ExPASy Swiss-Prot
Match: P29513 (Tubulin beta-5 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 834.7 bits (2155), Expect = 4.8e-241
Identity = 410/449 (91.31%), Postives = 429/449 (95.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIGSKFWEVICDEHGID+TG+Y+GD ++DLQLERINVYYNEASGGR
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WD+KNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQ++N+QNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMA+TFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEE 440
           NMNDLVAEYQQYQDAT D+E +++  EEE
Sbjct: 421 NMNDLVAEYQQYQDATADEEGEYDVEEEE 443

[Close]

BLAST of CmoCh12G003570 vs. ExPASy Swiss-Prot
Match: Q9ZPP0 (Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 833.9 bits (2153), Expect = 8.2e-241
Identity = 411/451 (91.13%), Postives = 426/451 (94.46%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIG+KFWEVICDEHGID TGKY GD  SDLQLERINVYYNEASGGR
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGD--SDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           +VPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WD+KNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPP GLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYA 442
           NMNDLVAEYQQYQDAT +DE ++ED EEE A
Sbjct: 421 NMNDLVAEYQQYQDATAEDEEEYEDEEEEMA 444

[Close]

BLAST of CmoCh12G003570 vs. ExPASy Swiss-Prot
Match: Q6VAF7 (Tubulin beta-5 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 2.4e-240
Identity = 412/451 (91.35%), Postives = 425/451 (94.24%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIG+KFWEVICDEHG+D TGKYNGD  SDLQLERINVYYNEASGGR
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDNTGKYNGD--SDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP+FGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTA AMFRG+MSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTACAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYA 442
           +MNDLVAEYQQYQDAT DDE +  + EEE A
Sbjct: 421 DMNDLVAEYQQYQDATADDEYEEGEEEEEEA 444

[Close]

BLAST of CmoCh12G003570 vs. ExPASy TrEMBL
Match: A0A6J1GI31 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111454351 PE=3 SV=1)

HSP 1 Score: 882.1 bits (2278), Expect = 9.7e-253
Identity = 438/453 (96.69%), Postives = 438/453 (96.69%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ 444
           NMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ
Sbjct: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ 448

[Close]

BLAST of CmoCh12G003570 vs. ExPASy TrEMBL
Match: A0A6J1KNN8 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111496210 PE=3 SV=1)

HSP 1 Score: 880.9 bits (2275), Expect = 2.2e-252
Identity = 437/453 (96.47%), Postives = 438/453 (96.69%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ 444
           NMNDLVAEYQQYQDATVDDEADFEDHEE+YAEQ
Sbjct: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEDYAEQ 448

[Close]

BLAST of CmoCh12G003570 vs. ExPASy TrEMBL
Match: A0A6J1K690 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111492047 PE=3 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 6.9e-251
Identity = 435/453 (96.03%), Postives = 436/453 (96.25%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ 444
           NMNDLVAEYQQYQDATVDD+ADFED EEEY EQ
Sbjct: 421 NMNDLVAEYQQYQDATVDDDADFEDREEEYPEQ 448

[Close]

BLAST of CmoCh12G003570 vs. ExPASy TrEMBL
Match: A0A6J1HEH2 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111462750 PE=3 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 6.9e-251
Identity = 435/453 (96.03%), Postives = 436/453 (96.25%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAEQ 444
           NMNDLVAEYQQYQDATVDD+ADFED EEEY EQ
Sbjct: 421 NMNDLVAEYQQYQDATVDDDADFEDREEEYPEQ 448

[Close]

BLAST of CmoCh12G003570 vs. ExPASy TrEMBL
Match: A0A0A0LPG6 (Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_2G368830 PE=3 SV=1)

HSP 1 Score: 872.8 bits (2254), Expect = 5.9e-250
Identity = 434/454 (95.59%), Postives = 438/454 (96.48%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDH-EEEYAEQ 444
           NMNDLVAEYQQYQDATVDD+ADFEDH ++EYA+Q
Sbjct: 421 NMNDLVAEYQQYQDATVDDDADFEDHDQDEYADQ 449

[Close]

BLAST of CmoCh12G003570 vs. TAIR 10
Match: AT1G75780.1 (tubulin beta-1 chain )

HSP 1 Score: 839.0 bits (2166), Expect = 1.8e-243
Identity = 414/452 (91.59%), Postives = 429/452 (94.91%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILHVQGGQCGNQIGSKFWEVICDEHG+D TG+YNGD S+DLQLERINVYYNEASGGR
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WDAKNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQ++NVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQILNVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPP G+KMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPTGIKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEEYAE 443
           NMNDLV+EYQQYQDAT D+E ++++ EE+  E
Sbjct: 421 NMNDLVSEYQQYQDATADEEDEYDEEEEQVYE 446

[Close]

BLAST of CmoCh12G003570 vs. TAIR 10
Match: AT1G20010.1 (tubulin beta-5 chain )

HSP 1 Score: 834.7 bits (2155), Expect = 3.4e-242
Identity = 410/449 (91.31%), Postives = 429/449 (95.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIGSKFWEVICDEHGID+TG+Y+GD ++DLQLERINVYYNEASGGR
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRAVLMDLEPGTMDSIRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61  YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM
Sbjct: 241 SGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WD+KNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQ++N+QNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPPKGLKMA+TFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEE 440
           NMNDLVAEYQQYQDAT D+E +++  EEE
Sbjct: 421 NMNDLVAEYQQYQDATADEEGEYDVEEEE 443

[Close]

BLAST of CmoCh12G003570 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 824.7 bits (2129), Expect = 3.5e-239
Identity = 408/454 (89.87%), Postives = 425/454 (93.61%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TG+Y GD  SDLQLERINVYYNEAS GR
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGD--SDLQLERINVYYNEASCGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           +VPRAVLMDLEPGTMDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY SLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WD+KNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+V
Sbjct: 301 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPP GLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEE-EYAEQ 444
           NMNDLV+EYQQYQDAT D+E D+ED EE EY ++
Sbjct: 421 NMNDLVSEYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]

BLAST of CmoCh12G003570 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 824.7 bits (2129), Expect = 3.5e-239
Identity = 408/454 (89.87%), Postives = 425/454 (93.61%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TG+Y GD  SDLQLERINVYYNEAS GR
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGD--SDLQLERINVYYNEASCGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           +VPRAVLMDLEPGTMDS+RSGPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD
Sbjct: 61  FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY SLTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WD+KNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+V
Sbjct: 301 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDIPP GLKMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEE-EYAEQ 444
           NMNDLV+EYQQYQDAT D+E D+ED EE EY ++
Sbjct: 421 NMNDLVSEYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]

BLAST of CmoCh12G003570 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 822.4 bits (2123), Expect = 1.8e-238
Identity = 403/449 (89.76%), Postives = 423/449 (94.21%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGIDATGKYNGDPSSDLQLERINVYYNEASGGR 60
           MREILH+QGGQCGNQIGSKFWEV+CDEHGID TG+Y G  +SDLQLER+NVYYNEAS GR
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVG--NSDLQLERVNVYYNEASCGR 60

Query: 61  YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 120
           YVPRA+LMDLEPGTMDS+R+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLD
Sbjct: 61  YVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 120

Query: 121 VVRKEAENCDCLQAYPKWGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180
           VVRKEAENCDCLQ     GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP
Sbjct: 121 VVRKEAENCDCLQ-----GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP 180

Query: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATM 240
           KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATM
Sbjct: 181 KVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATM 240

Query: 241 S----------QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQM 300
           S          QLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQY +LTVPELTQQM
Sbjct: 241 SGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQM 300

Query: 301 WDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360
           WD+KNMMCAADPRHGRYLTASAMFRG+MSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV
Sbjct: 301 WDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSV 360

Query: 361 CDIPPKGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420
           CDI P+GL MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES
Sbjct: 361 CDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAES 420

Query: 421 NMNDLVAEYQQYQDATVDDEADFEDHEEE 440
           NMNDLV+EYQQYQDAT DDE ++E+ E+E
Sbjct: 421 NMNDLVSEYQQYQDATADDEGEYEEDEDE 442

The following BLAST results are available for this feature:

BLAST of CmoCh12G003570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P12411	2.5e-242	91.59	Tubulin beta-1 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB1 PE=2 SV=1	[more]
Q6VAF6	4.3e-242	91.72	Tubulin beta-6 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]
P29513	4.8e-241	91.31	Tubulin beta-5 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB5 PE=2 SV=1	[more]
Q9ZPP0	8.2e-241	91.13	Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1	[more]
Q6VAF7	2.4e-240	91.35	Tubulin beta-5 chain OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]

BLAST of CmoCh12G003570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GI31	9.7e-253	96.69	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111454351 PE=3 SV=1	[more]
A0A6J1KNN8	2.2e-252	96.47	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111496210 PE=3 SV=1	[more]
A0A6J1K690	6.9e-251	96.03	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111492047 PE=3 SV=1	[more]
A0A6J1HEH2	6.9e-251	96.03	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111462750 PE=3 SV=1	[more]
A0A0A0LPG6	5.9e-250	95.59	Tubulin beta chain OS=Cucumis sativus OX=3659 GN=Csa_2G368830 PE=3 SV=1	[more]

BLAST of CmoCh12G003570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75780.1	1.8e-243	91.59	tubulin beta-1 chain	[more]
AT1G20010.1	3.4e-242	91.31	tubulin beta-5 chain	[more]
AT5G62690.1	3.5e-239	89.87	tubulin beta chain 2	[more]
AT5G62700.1	3.5e-239	89.87	tubulin beta chain 3	[more]
AT5G12250.1	1.8e-238	89.76	beta-6 tubulin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 405..425
None	No IPR available	PANTHER	PTHR11588:SF116	TUBULIN BETA-1 CHAIN-RELATED	coord: 1..438
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..423 e-value: 0.0 score: 834.139
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 110..128 score: 87.58 coord: 90..101 score: 94.76 coord: 242..255 score: 88.61 coord: 308..326 score: 81.05 coord: 43..60 score: 82.0 coord: 262..278 score: 86.49 coord: 326..340 score: 87.09 coord: 344..367 score: 78.0 coord: 409..427 score: 86.44 coord: 374..385 score: 79.05
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 197..217 score: 67.82 coord: 183..196 score: 79.11 coord: 10..30 score: 73.48 coord: 158..179 score: 59.63 coord: 367..395 score: 65.34 coord: 53..72 score: 68.16 coord: 139..157 score: 79.04
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..438
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 243..380 e-value: 1.2E-38 score: 144.4
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 258..379 e-value: 1.8E-37 score: 128.3
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 49..251 e-value: 1.4E-55 score: 200.7
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..218 e-value: 1.7E-66 score: 224.2
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..259 e-value: 4.1E-121 score: 405.5
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..245
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	Helix hairpin bin	coord: 371..427 e-value: 6.7E-35 score: 120.7
IPR037103	Tubulin/FtsZ-like, C-terminal domain	GENE3D	3.30.1330.20		coord: 260..370 e-value: 2.8E-40 score: 139.1
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 147..153
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 242..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G003570.1	CmoCh12G003570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton