CmoCh12G003110 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G003110
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	zinc finger protein 1-like
Location	Cmo_Chr12: 1928023 .. 1928619 (-)
RNA-Seq Expression	CmoCh12G003110
Synteny	CmoCh12G003110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCCTCCGCCGTTGACACCCCTCCACGACTGCAATTACAAAAGGGTTTTGGGGAAGAAGACGACGGCGACAAGTATCTCCGCCGTGGGATTCCGGCGGAGGAGTTGAATCTAATAGGAGATTTGAAAATGGGTTCAATAGAACCGAGGGTTTTTTCATGTAATTTCTGCCGGAGGAAATTTTACAGCTCACAAGCACTTGGAGGCCATCAAAATGCCCATAAAAGAGAGAGAACGTTGGCTAAAAGAGGCGGCTACCACCACTACACGGCGGCGGCTACAGCGCCGTTTTTCCCATTCCAAACCGGTCCCAATAGATCCCTCGGAATTCAACTTCACGCCATGGTCCATAAACCACCGCACTACACGGCGGTTTCCTCCTCCCACGGTTGGTCTAGAATCCCAATCCACCAACAACCCGGAATCGGAAAGCTCCCGCCGATCAACACCCACCGTTCTCCGCCACATGGCTTCAACACCGTAGGTAGGTTCAACTTGGACATGCGCCGTTCAACGGCGGCGGCTGGCGGCGTTCATTTCGACAATAAACAAGATGAGACCCACAAAGTATTGGATTTGTCTCTGAAGCTGTAA

mRNA sequence

ATGGAGTCCTCCGCCGTTGACACCCCTCCACGACTGCAATTACAAAAGGGTTTTGGGGAAGAAGACGACGGCGACAAGTATCTCCGCCGTGGGATTCCGGCGGAGGAGTTGAATCTAATAGGAGATTTGAAAATGGGTTCAATAGAACCGAGGGTTTTTTCATGTAATTTCTGCCGGAGGAAATTTTACAGCTCACAAGCACTTGGAGGCCATCAAAATGCCCATAAAAGAGAGAGAACGTTGGCTAAAAGAGGCGGCTACCACCACTACACGGCGGCGGCTACAGCGCCGTTTTTCCCATTCCAAACCGGTCCCAATAGATCCCTCGGAATTCAACTTCACGCCATGGTCCATAAACCACCGCACTACACGGCGGTTTCCTCCTCCCACGGTTGGTCTAGAATCCCAATCCACCAACAACCCGGAATCGGAAAGCTCCCGCCGATCAACACCCACCGTTCTCCGCCACATGGCTTCAACACCGTAGGTAGGTTCAACTTGGACATGCGCCGTTCAACGGCGGCGGCTGGCGGCGTTCATTTCGACAATAAACAAGATGAGACCCACAAAGTATTGGATTTGTCTCTGAAGCTGTAA

Coding sequence (CDS)

ATGGAGTCCTCCGCCGTTGACACCCCTCCACGACTGCAATTACAAAAGGGTTTTGGGGAAGAAGACGACGGCGACAAGTATCTCCGCCGTGGGATTCCGGCGGAGGAGTTGAATCTAATAGGAGATTTGAAAATGGGTTCAATAGAACCGAGGGTTTTTTCATGTAATTTCTGCCGGAGGAAATTTTACAGCTCACAAGCACTTGGAGGCCATCAAAATGCCCATAAAAGAGAGAGAACGTTGGCTAAAAGAGGCGGCTACCACCACTACACGGCGGCGGCTACAGCGCCGTTTTTCCCATTCCAAACCGGTCCCAATAGATCCCTCGGAATTCAACTTCACGCCATGGTCCATAAACCACCGCACTACACGGCGGTTTCCTCCTCCCACGGTTGGTCTAGAATCCCAATCCACCAACAACCCGGAATCGGAAAGCTCCCGCCGATCAACACCCACCGTTCTCCGCCACATGGCTTCAACACCGTAGGTAGGTTCAACTTGGACATGCGCCGTTCAACGGCGGCGGCTGGCGGCGTTCATTTCGACAATAAACAAGATGAGACCCACAAAGTATTGGATTTGTCTCTGAAGCTGTAA

Protein sequence

MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGYHHYTAAATAPFFPFQTGPNRSLGIQLHAMVHKPPHYTAVSSSHGWSRIPIHQQPGIGKLPPINTHRSPPHGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETHKVLDLSLKL

Homology

[Close]

BLAST of CmoCh12G003110 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-24
Identity = 92/236 (38.98%), Postives = 119/236 (50.42%), Query Frame = 0


Query: 1   MESSAVDTPPRLQLQK-GFGEEDDGDKYLRRG-IPAEELNLIGDLKMGS----------- 60
           ME S       L+++K G  + + G   L RG   + ELNLI   K  S           
Sbjct: 1   MEPSIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQE 60

Query: 61  --IEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGYHHYT-AAATAPFFPFQTG 120
              +PRVFSCN+C+RKFYSSQALGGHQNAHKRERTLAKRG Y+  T ++  +  F F  G
Sbjct: 61  QLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHG 120

Query: 121 P-----------------NRS-LGIQLHAMVHKPPHY--TAVSSSHGWSRIPIHQQPGIG 180
                             NRS LGIQ H+ +HKP        S SH + +  IHQ+P IG
Sbjct: 121 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQ-SIHQKPTIG 180

Query: 181 KLPPINTHRSPPHGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETH--KVLDLSLKL 199
           K+ P   H          G  N +M  +     G HF + Q++ +  K +DL+LKL
Sbjct: 181 KMLPEKFH------LEVAGNNNSNMVAAKLERIG-HFKSNQEDHNQFKKIDLTLKL 228

[Close]

BLAST of CmoCh12G003110 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-23
Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 47  SIEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGYHHYTAAATAPFFPFQTGP- 106
           S E ++FSCN+C+R FYSSQALGGHQNAHKRERTLAKRG      A+A+A   P+   P 
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRG--QRMAASASAFGHPYGFSPL 114

Query: 107 --------NRSLGIQLHAMVHKPPHYTAVSSSHG---WSRIPIHQQPGIGKLPPINTHRS 158
                   +RSLGIQ H++ HK   Y      +G   WSR+P  QQP IGK P ++    
Sbjct: 115 PFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHH 174

[Close]

BLAST of CmoCh12G003110 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 48/94 (51.06%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 47  SIEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAK-------------RGGYHHYTAA 106
           S+  RVFSCN+C+RKFYSSQALGGHQNAHKRERTLAK             RG   +Y AA
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAA 138

Query: 107 ATA---PFFPFQTGPN------RSLGIQLHAMVH 119
           ATA      P     N      R+LGI+ H+  H
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]

BLAST of CmoCh12G003110 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-14
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 50  PRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRG-------GYHHYTAAATAPFFPFQ 109
           PRVFSCN+CRRKFYSSQALGGHQNAHKRERT+AKR        G+HH       P+    
Sbjct: 56  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHH------RPY---- 115

Query: 110 TGPNRSLGIQLHA 116
           T  + SLG+Q H+
Sbjct: 116 TYTSSSLGMQAHS 118

[Close]

BLAST of CmoCh12G003110 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 49 EPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKR 85
          +PRVFSCN+C+RKFYSSQALGGHQNAHK ERTLAK+
Sbjct: 48 QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

[Close]

BLAST of CmoCh12G003110 vs. ExPASy TrEMBL
Match: A0A6J1GJK2 (zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 3.9e-113
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60
           MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR
Sbjct: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKRGGYHHYTAAATAPFFPFQTGPNRSLGIQLHAMVHKP 120
           KFYSSQALGGHQNAHKRERTLAKRGGYHHYTAAATAPFFPFQTGPNRSLGIQLHAMVHKP
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGGYHHYTAAATAPFFPFQTGPNRSLGIQLHAMVHKP 120

Query: 121 PHYTAVSSSHGWSRIPIHQQPGIGKLPPINTHRSPPHGFNTVGRFNLDMRRSTAAAGGVH 180
           PHYTAVSSSHGWSRIPIHQQPGIGKLPPINTHRSPPHGFNTVGRFNLDMRRSTAAAGGVH
Sbjct: 121 PHYTAVSSSHGWSRIPIHQQPGIGKLPPINTHRSPPHGFNTVGRFNLDMRRSTAAAGGVH 180

Query: 181 FDNKQDETHKVLDLSLKL 199
           FDNKQDETHKVLDLSLKL
Sbjct: 181 FDNKQDETHKVLDLSLKL 198

[Close]

BLAST of CmoCh12G003110 vs. ExPASy TrEMBL
Match: A0A6J1KJP6 (zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496324 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 4.8e-103
Identity = 186/202 (92.08%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60
           MESSA DTPPRLQL+KGFGEED+ DKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR
Sbjct: 1   MESSAADTPPRLQLKKGFGEEDESDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKRGGYHHYT---AAATAPFFPFQTGPNRSLGIQLHAMV 120
           KFYSSQALGGHQNAHKRERTLAKRG YH YT   AAATAPFFPFQTGPNRSLGIQLHAMV
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGSYHRYTAAAAAATAPFFPFQTGPNRSLGIQLHAMV 120

Query: 121 HKPPHYTAVSSSHGWSRIPIHQQPGIGKLPPINTHRSPPHGFNTVGRFNLDMRRST-AAA 180
           HKPPHYTA SSSHGWSRIPIHQQPGIGKLPPIN+ RSPPHGFN++GRFNLDM RST AAA
Sbjct: 121 HKPPHYTAASSSHGWSRIPIHQQPGIGKLPPINSRRSPPHGFNSIGRFNLDMFRSTAAAA 180

Query: 181 GGVHFDNKQDETHKVLDLSLKL 199
           GGVHFDNKQDETHKVLDLSLKL
Sbjct: 181 GGVHFDNKQDETHKVLDLSLKL 202

[Close]

BLAST of CmoCh12G003110 vs. ExPASy TrEMBL
Match: A0A6J1K332 (zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491949 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 6.2e-58
Identity = 130/218 (59.63%), Postives = 149/218 (68.35%), Query Frame = 0


Query: 1   MESSAVDTPPRL----------QLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEP 60
           MESS  +TPP+           +LQKGF EEDD   +LR G+PAEELNLI  LKMG  E 
Sbjct: 1   MESSTTETPPKPPSQNQEQHDDELQKGFAEEDDNHHHLRGGVPAEELNLIDGLKMGLPER 60

Query: 61  RVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKR--------GGYHHYTAAATAPFFPFQ 120
           R+FSCNFCRRKFYSSQALGGHQNAHKRERTLAKR        GGYHHY +AA        
Sbjct: 61  RLFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGQRPPAFGGYHHYASAA-------- 120

Query: 121 TGPNRSLGIQLHAMVHKPPHYT-AVSSSHGWSRIPIHQQPGIGKLPPINTHRSPPHGFNT 180
             P+RS+GIQ+HAMVHKPPH+  A    +GWSR PIHQQPG+GKLP +N   +  H   T
Sbjct: 121 --PSRSIGIQVHAMVHKPPHHAPAFGIIYGWSRTPIHQQPGVGKLPVMNAGHAINH---T 180

Query: 181 VGRFNLDMRRSTAAAGGVHFDNKQ-DETHKVLDLSLKL 199
             R N D+ RST A GGV  +NKQ +E HKV+DLSLKL
Sbjct: 181 SSRMNFDVERST-AGGGVGLNNKQEEERHKVVDLSLKL 204

[Close]

BLAST of CmoCh12G003110 vs. ExPASy TrEMBL
Match: A0A5A7VG79 (Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002100 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.2e-57
Identity = 133/229 (58.08%), Postives = 148/229 (64.63%), Query Frame = 0


Query: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60
           MESS          ++  G+ +D   +LRR IPAEELNLI  LKM S EPRVFSCNFC+R
Sbjct: 1   MESSTAPKTASYNQEQNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFCQR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKR--------GGYHHYTAAATAPFFPFQTGP-----NR 120
           KFYSSQALGGHQNAHKRERTLAKR        GGYHHY A A AP F    GP     NR
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNNNR 120

Query: 121 SLGIQLHAMVHKPPHYTAVSSSH-----------GWSRIPIHQQPGIGKLP------PIN 180
           SLGIQ+HAMVHKP H+  VSS+            GWSR PIHQQPG+GKLP      PIN
Sbjct: 121 SLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHPIN 180

Query: 181 -THRSPPHGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETHKVLDLSLKL 199
            T   PP G ++VGRF+ D+ RSTAAA         D+THKVLDLSLKL
Sbjct: 181 HTTGFPPRGCSSVGRFDFDVVRSTAAAA--------DDTHKVLDLSLKL 221

[Close]

BLAST of CmoCh12G003110 vs. ExPASy TrEMBL
Match: A0A1S3BC89 (zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.2e-57
Identity = 133/229 (58.08%), Postives = 148/229 (64.63%), Query Frame = 0


Query: 1   MESSAVDTPPRLQLQKGFGEEDDGDKYLRRGIPAEELNLIGDLKMGSIEPRVFSCNFCRR 60
           MESS          ++  G+ +D   +LRR IPAEELNLI  LKM S EPRVFSCNFC+R
Sbjct: 1   MESSTAPKTASYNQEQNDGDLEDNHHHLRREIPAEELNLIEGLKMASSEPRVFSCNFCQR 60

Query: 61  KFYSSQALGGHQNAHKRERTLAKR--------GGYHHYTAAATAPFFPFQTGP-----NR 120
           KFYSSQALGGHQNAHKRERTLAKR        GGYHHY A A AP F    GP     NR
Sbjct: 61  KFYSSQALGGHQNAHKRERTLAKRGGQRFPAFGGYHHYAAVAAAPSFLLPGGPNNNNNNR 120

Query: 121 SLGIQLHAMVHKPPHYTAVSSSH-----------GWSRIPIHQQPGIGKLP------PIN 180
           SLGIQ+HAMVHKP H+  VSS+            GWSR PIHQQPG+GKLP      PIN
Sbjct: 121 SLGIQVHAMVHKPSHHPPVSSNSRFGVHYGRSDGGWSRTPIHQQPGVGKLPLMNAGHPIN 180

Query: 181 -THRSPPHGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETHKVLDLSLKL 199
            T   PP G ++VGRF+ D+ RSTAAA         D+THKVLDLSLKL
Sbjct: 181 HTTGFPPRGCSSVGRFDFDVVRSTAAAA--------DDTHKVLDLSLKL 221

[Close]

BLAST of CmoCh12G003110 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 6.6e-28
Identity = 85/197 (43.15%), Postives = 102/197 (51.78%), Query Frame = 0


Query: 35  EELNLIGDLKMG----------SIEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKR 94
           +ELNL+  L+ G          S E ++FSCN+C+R FYSSQALGGHQNAHKRERTLAKR
Sbjct: 76  QELNLLDCLETGVVTPSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKR 135

Query: 95  GGYHHYTAAATAPF----FPFQ-TGPNRSLGIQLHAMVHKPPHYTAVSSSHG---WSRIP 154
           G      AA   P+     PF     NR+LGIQ H+M HKP  Y      +G   WSRIP
Sbjct: 136 GQRMASAAAFGHPYGFAPVPFHGQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQINWSRIP 195

Query: 155 IHQQPGIGKLPPINTHR-------SPP-------HGFNTVGRFNLDMRRSTAAAGGVH-F 199
           + QQP I KL     H        +PP        G   VGR  ++   S     G    
Sbjct: 196 LVQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELL 255

[Close]

BLAST of CmoCh12G003110 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 92/236 (38.98%), Postives = 119/236 (50.42%), Query Frame = 0


Query: 1   MESSAVDTPPRLQLQK-GFGEEDDGDKYLRRG-IPAEELNLIGDLKMGS----------- 60
           ME S       L+++K G  + + G   L RG   + ELNLI   K  S           
Sbjct: 1   MEPSIKGDQEMLKIKKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQE 60

Query: 61  --IEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGYHHYT-AAATAPFFPFQTG 120
              +PRVFSCN+C+RKFYSSQALGGHQNAHKRERTLAKRG Y+  T ++  +  F F  G
Sbjct: 61  QLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHG 120

Query: 121 P-----------------NRS-LGIQLHAMVHKPPHY--TAVSSSHGWSRIPIHQQPGIG 180
                             NRS LGIQ H+ +HKP        S SH + +  IHQ+P IG
Sbjct: 121 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLGRQTTSLSHVFKQ-SIHQKPTIG 180

Query: 181 KLPPINTHRSPPHGFNTVGRFNLDMRRSTAAAGGVHFDNKQDETH--KVLDLSLKL 199
           K+ P   H          G  N +M  +     G HF + Q++ +  K +DL+LKL
Sbjct: 181 KMLPEKFH------LEVAGNNNSNMVAAKLERIG-HFKSNQEDHNQFKKIDLTLKL 228

[Close]

BLAST of CmoCh12G003110 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 109.8 bits (273), Expect = 2.6e-24
Identity = 60/123 (48.78%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 47  SIEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRGGYHHYTAAATAPFFPFQTGP- 106
           S E ++FSCN+C+R FYSSQALGGHQNAHKRERTLAKRG      A+A+A   P+   P 
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRG--QRMAASASAFGHPYGFSPL 114

Query: 107 --------NRSLGIQLHAMVHKPPHYTAVSSSHG---WSRIPIHQQPGIGKLPPINTHRS 158
                   +RSLGIQ H++ HK   Y      +G   WSR+P  QQP IGK P ++    
Sbjct: 115 PFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHYGQINWSRLPFDQQPAIGKFPSMDNFHH 174

[Close]

BLAST of CmoCh12G003110 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16
Identity = 48/94 (51.06%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 47  SIEPRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAK-------------RGGYHHYTAA 106
           S+  RVFSCN+C+RKFYSSQALGGHQNAHKRERTLAK             RG   +Y AA
Sbjct: 79  SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAA 138

Query: 107 ATA---PFFPFQTGPN------RSLGIQLHAMVH 119
           ATA      P     N      R+LGI+ H+  H
Sbjct: 139 ATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAH 172

[Close]

BLAST of CmoCh12G003110 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-15
Identity = 43/73 (58.90%), Postives = 50/73 (68.49%), Query Frame = 0


Query: 50  PRVFSCNFCRRKFYSSQALGGHQNAHKRERTLAKRG-------GYHHYTAAATAPFFPFQ 109
           PRVFSCN+CRRKFYSSQALGGHQNAHKRERT+AKR        G+HH       P+    
Sbjct: 56  PRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHH------RPY---- 115

Query: 110 TGPNRSLGIQLHA 116
           T  + SLG+Q H+
Sbjct: 116 TYTSSSLGMQAHS 118

The following BLAST results are available for this feature:

BLAST of CmoCh12G003110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42485	1.5e-24	38.98	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39262	3.7e-23	48.78	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q39263	1.1e-14	51.06	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q39266	4.0e-14	58.90	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39261	1.1e-11	86.11	Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1	[more]

BLAST of CmoCh12G003110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJK2	3.9e-113	100.00	zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454443 PE=4 SV...	[more]
A0A6J1KJP6	4.8e-103	92.08	zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496324 PE=4 SV=1	[more]
A0A6J1K332	6.2e-58	59.63	zinc finger protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111491949 PE=4 SV=1	[more]
A0A5A7VG79	5.2e-57	58.08	Zinc finger protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BC89	5.2e-57	58.08	zinc finger protein 3-like OS=Cucumis melo OX=3656 GN=LOC103488342 PE=4 SV=1	[more]

BLAST of CmoCh12G003110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	6.6e-28	43.15	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G80730.1	1.1e-25	38.98	zinc-finger protein 1	[more]
AT5G25160.1	2.6e-24	48.78	zinc finger protein 3	[more]
AT1G66140.1	7.6e-16	51.06	zinc finger protein 4	[more]
AT1G24625.1	2.9e-15	58.90	zinc finger protein 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 44..94 e-value: 2.8E-5 score: 25.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR47287:SF1	ZINC FINGER PROTEIN 1-LIKE	coord: 35..198
IPR044246	Zinc finger protein 3-like	PANTHER	PTHR47287	C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN	coord: 35..198
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 55..75
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 53..80 score: 11.19825
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 50..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G003110.1	CmoCh12G003110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009788	negative regulation of abscisic acid-activated signaling pathway