CmoCh12G002970 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G002970
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein MEMO1-like
Location	Cmo_Chr12: 1871951 .. 1876280 (-)
RNA-Seq Expression	CmoCh12G002970
Synteny	CmoCh12G002970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTATTTGGGCCAGGGCTATGTGGGCCTGGGGTAATGTGGGCCTGAGGTCATATGGGCCTGGGGTAATATGGGCCGAATCAACCCAAAGTGGAGCCGGCAGAATCGGGAAATTTTGAAATTTTGGAGAACTCAGAATGCTTAAAAGCCGATTGGAAGTCAGTTCATCGTCATTCGATCTTCTTTTACTCACTGATCTCACGACTGTGTTTTTGTTTAATTCTCTGACCTTTTTCGTTTTGATTCAATCTGTGATCGTCGTAGTTGCTGTTATGGAGAATGTCAGAAGAGCGTCTCATGCTGGTTCGTGGTATTCCCGCAATTGTAAGTCGCCTTCTATTACTCTCTTCTTATATGAAACAAATTCGAACGAGTTATGCACTCCTCTCTCTCTGCTGATCAATCTGAATTTTCTGGTTCTGTGTTACTCTGTTCATCTGGATTAATGCGAGTTTCTGGAAGGCTGTTGATTATTCAAATTTTGATATACTTGAATGCTAGGAGTTTATTTGTTTGTTTGTTTTGTGGCTGCCCAGCTGCGCAAGGCAGTTTGTGGAAGTTTTTGAATTAAACTTATATGGGAGAGGGATTTTTGTTATGTTTGAGAAGTCGGGTTTTATTGGTGGAACACTGAGGGGGTACTTCCAACTCAATTGTTGTGAAGAAAAAGCTGGGAGAAAGATATTTTGAACTTCAAATTGTGACCTGGTTGTTACTTGGCCTTAGTTTCTGCTTTTGCAAAAAAATGATAATCTAACAATGTTTAAGCATTACACTTTTGATTTACTTCCACTATAGTTAGATAACCGGTGTTTTAAAGTCTGTATGTGAGATCCCACCTCAGTTGGGGAGGAGAACGAAACACCTATAAGGGTGTGGAAACCTCTCCGTGGCTGACGCGTTTTAAAAACTTTGAGGGGAAGCCCAGAAAAGACAATATCTGCTAGCGCTGAGCTTGGGATCACAAATGGTATCAGAGTCAAATACTGGGCAATGTGCAAGCGAGGAGGTTGTTCCCCGAAGAGGTAGACACAAGGCAGTGTGCCAGTAAGGACGCTGGCCCCGAAGGGGGTGGATTTGGTAGAGGTCCCACATTGATGGGAGAAAGGAATGAGTGCCAGCAAGGACGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTAGCTTCAAAGGGGGTGGATTTGGTGGGTGTTCCACATTGATTGGACAAAGGAATGAGTGCCAGCGAGGACGTTGGGCCCTAAGGGGGGTGGATTGTGAGATCTCACATCGGTTGGGGAGGAGAACGAAACACCCTTATAAGGGTGTGGAAACCTCTTCCTTGCATACCGTTTTAAAAACCTTGAGGGCACCTGAAAAGGAAGGCCCAATGAGGACAATATCTGCTAGCGCCGGGCTTGTGCCGTTACACTCTATCTGACCAAGTAATTCTTGCTCGTACTTCTAAGGATACTTCTAAGATTTTGAGTCATACTTGGTGGAAGATTAAACTTTTATTGAACAAATAAGTAGATCAAGACCTCCCACTGTGATCCAAAGTATCCTCATATACTAGAGGTCATGATTTTAACGAGGAACGTTGCTCTACATAATCTTAAATACACAACACTCGAATGGAATAACGCTCCATTGCTCGAAGACATATCTTTACTTCTTTTGCATTAACCTTTATAGATCTTCCATGACATGGGGAGGGTATTCGTGTTTGAGTTTCTTTTTATTGTGCAGTTTTTATAATTTGTTGTGGAAGTCAAATGGATACTAAATTATGATACCTTGGATTTTCTCTCCTTCTAGCTAAGAAACTGGCAGAGGAGCTTGATGGATGGCTAAGGGCATCAGGCCTGTCTAAATCCCCAGACGTACGCGGTGTAATTGCTCCGTAAGTTGCCATCAGAAATTTTTTCTAAAAAGACCTATAAAATGTAATAACTTTGATATATTTCGATTTCTGTGGAACCACAGGCATGCTGGTTATTCGTATTCAGGACGTGCTGCTGCATATGCATTTGCTAACATTGATCCAACAACCATGTCGGTTTATGTCCCTTTTAATCTCTACTTCTTGTCTAATGGTGAACTCTTTCCAGAACATTTTATTATGAATTCTTTGAAATCATTTCAACATAACCCTGTTTAAGCCGTTTATTTGTTTGTTAGATTATTAAGCGGCTACCAGCTTCTTGCTATACTAATATATGATGCTTATATTTGCAGTTCTAGGATCTTTCTTCTTGGTCCATCTCACCATTATTATACTAAAAAATGTGCTCTTTCAACAGCCACTATTTATCAGACCCCTCTGGGTGACCTTCCTATTGATGTGGAAGGTATTCTGACATTTAAAGATTTTATTGTTAGATTACTTTGCATGAACTTGCTATTAGATTACTTTGCAAGCTTCTCCAAAAGGCCTCAACCAATGGAGATAGTATTCCCCACTTATAAATCCATGATCTTCCGCTAAATTAACTAATGTGGGACCCACTCCCAACAAAGTACACTATGTAAGCCTCCCCTGAGGCTTATTTAGCTCTCGAATAGCCTCCCCTTAATCGAGGCTCGACTCCTTACTCTGGAGCCCTCAAACAAAGTATACCCTTTGTTCGACACTTTAGTCACTTTTGACTACACCTTCGAGGCTCACAATTCTTTGTTCGATATTTGATGATTCTATTGACATGGCTAAGTTTAGGGCATGGCTCTGATACCATGTTAGGAATCACGACTCTCCACAATAGTATGATATTGTCCATTTTGAGCATAAGCTCTCATGGCTTTGCTTTGAGCTTCCCCAAAAGGCCTAATACCGATGGAGATAGTATTCTCCACTTATAAACCCATGATCTTCCACTAAATTAACCAATATGGGACTCGCTCCCAATAATCCTCAACACTTGCATCCATTGAAATTTGAAATAGTTGTCTGATTTTTTTTAATTGTTCTTCTAGTAATATCTTCATGTCTTTTTCACTTTGGCAGTCATTGAGGAGCTTAAAGCTACAGGGAAATTTGAACTGATGGATATGCTTGTTGATGAAGCTGAACACAGCATGGAAATGCACTTGCCATATCTTGCGAAAGTATTTGAGGGGTAATTTTAGTTTGACCTAATGATTATTATGTATCATTCTGGAGACCTTCTCTTATAGATAAAGATGCAATCATGCAGGCATTCAGTGAAAGTTGTACCTATTTTAGTTGGTGCTGTTTCTGCACAAAGTGAGGCGATGTACGGACGCCTGCTTGCCAAATATATGGATGATCCAACGAATTTCTTCTCGGTATCCTCGGACTTTTGTCACTGGGGGTCTCGGTATGTTCGAGTTGCTTCTTTTTTGTTTCATCGATGCATTCTCTGCCATTAGGTTGTTACGTGTTGGATAATGTATCAAGTGTTGAATTCTTCAATCTTACATAAATGGCTTTCGAACTTATTCACCGTCTGAATTTCATCTGATGTGCACTCATAGGTTCAGCTACATGCATTACGACAAGAAACATGGGGCAATATACAAATCTATTGAAGCTTTGGATCACATGGGCATGGATGTAATAGAAACAGGAGATCCTGAAGCATTCAGAATGTATCTGCAGGAGTATAACAACATCATTTGTGGTCGTCACTCTATCAGTATATATCTTCATGTAAGTTTCTGAAAACACTTTGAAACACTCCAAAACGAGTGTGAGATCTTACATTGATTGGAGAGGAAAACGAAACATTCACTTACAAGGGTGTGGATCTCCCTAGTAGACGTGTTTTACCTAAAGGGAAAGTCTAAAGACGATGATATCTGCAAGCGGTGAGCTTGGGCTGTTACAAATGATATCAAAGCCAAACACCGGGCGGTGTGCCAGCGAGGACACTAGCCCCAAGGGGGTGGATTATGAGATCTCACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAGGGTGTGAAAACCTCTCCCAGTAGATGCGTTTTAAAACTTTGAAGCAAGGGATATTTTTTGGTTCCATTGCATCACTCTGCATCTGATGATGAATTGCTTCTATTTCACCAGATGTTGAAGCACAGCTCAACAAAAATGAAGATCAAATTCCTTCAATACGAACAATCCAATCGATGCCAGACGATGCGAGACAGCAGTGTCAGCTACGCATCCGCTGCAGCCAAGGTGGATGCTTGAATCTCTGTGAATTAGCAATTAACTTAATTGCCTCCATTGCAATTTCATGCAGCAATTAACTTAATTGCCTCCATTGCAATTTCATGCATTTTACTTGATCGAACCGCCATCGTCTTAAATTATATGTCAAGTCTCCTCTGTTAATATCATTCCTTCA

mRNA sequence

GGTATTTGGGCCAGGGCTATGTGGGCCTGGGGTAATGTGGGCCTGAGGTCATATGGGCCTGGGGTAATATGGGCCGAATCAACCCAAAGTGGAGCCGGCAGAATCGGGAAATTTTGAAATTTTGGAGAACTCAGAATGCTTAAAAGCCGATTGGAAGTCAGTTCATCGTCATTCGATCTTCTTTTACTCACTGATCTCACGACTGTGTTTTTGTTTAATTCTCTGACCTTTTTCGTTTTGATTCAATCTGTGATCGTCGTAGTTGCTGTTATGGAGAATGTCAGAAGAGCGTCTCATGCTGGTTCGTGGTATTCCCGCAATTCTAAGAAACTGGCAGAGGAGCTTGATGGATGGCTAAGGGCATCAGGCCTGTCTAAATCCCCAGACGTACGCGGTGTAATTGCTCCGCATGCTGGTTATTCGTATTCAGGACGTGCTGCTGCATATGCATTTGCTAACATTGATCCAACAACCATTTCTAGGATCTTTCTTCTTGGTCCATCTCACCATTATTATACTAAAAAATGTGCTCTTTCAACAGCCACTATTTATCAGACCCCTCTGGGTGACCTTCCTATTGATGTGGAAGTCATTGAGGAGCTTAAAGCTACAGGGAAATTTGAACTGATGGATATGCTTGTTGATGAAGCTGAACACAGCATGGAAATGCACTTGCCATATCTTGCGAAAGTATTTGAGGGGCATTCAGTGAAAGTTGTACCTATTTTAGTTGGTGCTGTTTCTGCACAAAGTGAGGCGATGTACGGACGCCTGCTTGCCAAATATATGGATGATCCAACGAATTTCTTCTCGGTATCCTCGGACTTTTGTCACTGGGGGTCTCGGTTCAGCTACATGCATTACGACAAGAAACATGGGGCAATATACAAATCTATTGAAGCTTTGGATCACATGGGCATGGATGTAATAGAAACAGGAGATCCTGAAGCATTCAGAATGTATCTGCAGGAGTATAACAACATCATTTGTGGTCGTCACTCTATCAGTATATATCTTCATATGTTGAAGCACAGCTCAACAAAAATGAAGATCAAATTCCTTCAATACGAACAATCCAATCGATGCCAGACGATGCGAGACAGCAGTGTCAGCTACGCATCCGCTGCAGCCAAGGTGGATGCTTGAATCTCTGTGAATTAGCAATTAACTTAATTGCCTCCATTGCAATTTCATGCAGCAATTAACTTAATTGCCTCCATTGCAATTTCATGCATTTTACTTGATCGAACCGCCATCGTCTTAAATTATATGTCAAGTCTCCTCTGTTAATATCATTCCTTCA

Coding sequence (CDS)

ATGCTTAAAAGCCGATTGGAAGTCAGTTCATCGTCATTCGATCTTCTTTTACTCACTGATCTCACGACTGTGTTTTTGTTTAATTCTCTGACCTTTTTCGTTTTGATTCAATCTGTGATCGTCGTAGTTGCTGTTATGGAGAATGTCAGAAGAGCGTCTCATGCTGGTTCGTGGTATTCCCGCAATTCTAAGAAACTGGCAGAGGAGCTTGATGGATGGCTAAGGGCATCAGGCCTGTCTAAATCCCCAGACGTACGCGGTGTAATTGCTCCGCATGCTGGTTATTCGTATTCAGGACGTGCTGCTGCATATGCATTTGCTAACATTGATCCAACAACCATTTCTAGGATCTTTCTTCTTGGTCCATCTCACCATTATTATACTAAAAAATGTGCTCTTTCAACAGCCACTATTTATCAGACCCCTCTGGGTGACCTTCCTATTGATGTGGAAGTCATTGAGGAGCTTAAAGCTACAGGGAAATTTGAACTGATGGATATGCTTGTTGATGAAGCTGAACACAGCATGGAAATGCACTTGCCATATCTTGCGAAAGTATTTGAGGGGCATTCAGTGAAAGTTGTACCTATTTTAGTTGGTGCTGTTTCTGCACAAAGTGAGGCGATGTACGGACGCCTGCTTGCCAAATATATGGATGATCCAACGAATTTCTTCTCGGTATCCTCGGACTTTTGTCACTGGGGGTCTCGGTTCAGCTACATGCATTACGACAAGAAACATGGGGCAATATACAAATCTATTGAAGCTTTGGATCACATGGGCATGGATGTAATAGAAACAGGAGATCCTGAAGCATTCAGAATGTATCTGCAGGAGTATAACAACATCATTTGTGGTCGTCACTCTATCAGTATATATCTTCATATGTTGAAGCACAGCTCAACAAAAATGAAGATCAAATTCCTTCAATACGAACAATCCAATCGATGCCAGACGATGCGAGACAGCAGTGTCAGCTACGCATCCGCTGCAGCCAAGGTGGATGCTTGA

Protein sequence

MLKSRLEVSSSSFDLLLLTDLTTVFLFNSLTFFVLIQSVIVVVAVMENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYAFANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELMDMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFFSVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIICGRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA

Homology

[Close]

BLAST of CmoCh12G002970 vs. ExPASy Swiss-Prot
Match: Q6GNT9 (Protein MEMO1 OS=Xenopus laevis OX=8355 GN=memo1 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 9.1e-83
Identity = 151/290 (52.07%), Postives = 197/290 (67.93%), Query Frame = 0


Query: 50  RRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYAFANI 109
           R ASHAGSWYS +  +L+ +LDGWL  +  SK P  R +IAPHAGY+Y G  AA+A+  +
Sbjct: 8   REASHAGSWYSASGSQLSAQLDGWLSQAQTSKRP-ARAIIAPHAGYTYCGSCAAHAYKQV 67

Query: 110 DPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELMDMLV 169
           DP+   R+F+LGPSHH    +CALST  IY+TPL DL +D +V  EL  TG FE M +  
Sbjct: 68  DPSVTRRVFILGPSHHVALSRCALSTVDIYRTPLYDLHVDQKVYGELWKTGMFERMSLQT 127

Query: 170 DEAEHSMEMHLPYLAKVFEGH--SVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFFSV 229
           DE EHS+EMHLPY AK  E H   + +VP+LVGA+S   E  +G++ +KY+ DPTN F +
Sbjct: 128 DEDEHSIEMHLPYTAKAMESHKDDLTIVPVLVGALSESKEQEFGKVFSKYLADPTNLFVI 187

Query: 230 SSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIICGR 289
           SSDFCHWG RF Y +YD+  G IY+SIE LD MGM +IE  DP  F  YL++Y+N ICGR
Sbjct: 188 SSDFCHWGQRFRYTYYDESQGEIYRSIENLDKMGMSIIEQLDPVQFSNYLKKYHNTICGR 247

Query: 290 HSISIYLHM---LKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKV 335
           H I + L+    L+ +   M   FL Y QS++C++ +DSSVSYA+ A  V
Sbjct: 248 HPIGVLLNAATELQKNGVNMSFSFLNYAQSSQCRSWQDSSVSYAAGALVV 296

[Close]

BLAST of CmoCh12G002970 vs. ExPASy Swiss-Prot
Match: Q6DJ03 (Protein MEMO1 OS=Xenopus tropicalis OX=8364 GN=memo1 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.0e-82
Identity = 151/290 (52.07%), Postives = 197/290 (67.93%), Query Frame = 0


Query: 50  RRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYAFANI 109
           R ASHAGSWY+ +  +L+ +LDGWL  +  SK P  R +IAPHAGY+Y G  AA+A+  +
Sbjct: 8   REASHAGSWYTASGSQLSAQLDGWLSQAQTSKRP-ARAIIAPHAGYTYCGSCAAHAYKQV 67

Query: 110 DPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELMDMLV 169
           DP+   R+F+LGPSHH    +CALST  IY+TPL DL ID +V  +L  TG FE M +  
Sbjct: 68  DPSVTRRVFILGPSHHVALSRCALSTVDIYRTPLYDLHIDQKVYGDLWKTGMFERMSLQT 127

Query: 170 DEAEHSMEMHLPYLAKVFEGH--SVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFFSV 229
           DE EHS+EMHLPY AK  E H   + +VP+LVGA+S   E  +G+L +KY+ DPTN F +
Sbjct: 128 DEDEHSIEMHLPYTAKTMESHKDDLTIVPVLVGALSESKEQEFGKLFSKYLADPTNLFVI 187

Query: 230 SSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIICGR 289
           SSDFCHWG RF Y +YD+  G IY+SIE LD MGM +IE  DP  F  YL++Y+N ICGR
Sbjct: 188 SSDFCHWGQRFRYTYYDESQGEIYRSIENLDKMGMGIIEQLDPVQFSNYLKKYHNTICGR 247

Query: 290 HSISIYLHM---LKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKV 335
           H I + L+    L+ +   M   FL Y QS++C++ +DSSVSYA+ A  V
Sbjct: 248 HPIGVLLNAATELQKNGVNMSFSFLNYAQSSQCRSWQDSSVSYAAGALVV 296

[Close]

BLAST of CmoCh12G002970 vs. ExPASy Swiss-Prot
Match: Q4QQR9 (Protein MEMO1 OS=Rattus norvegicus OX=10116 GN=Memo1 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.5e-80
Identity = 149/290 (51.38%), Postives = 195/290 (67.24%), Query Frame = 0


Query: 50  RRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYAFANI 109
           R ASHAGSWY+ +  +L  +L+GWL     +K P  R +IAPHAGY+Y G  AA+A+  +
Sbjct: 8   REASHAGSWYTASGPQLNAQLEGWLSQVQSTKRP-ARAIIAPHAGYTYCGSCAAHAYKQV 67

Query: 110 DPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELMDMLV 169
           DP+   RIF+LGPSHH    +CALS+  IY+TPL DL ID ++  EL  TG FE M +  
Sbjct: 68  DPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQT 127

Query: 170 DEAEHSMEMHLPYLAKVFEGH--SVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFFSV 229
           DE EHS+EMHLPY AK  E H     ++P+LVGA+S   E  +G+L +KY+ DP+N F V
Sbjct: 128 DEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVV 187

Query: 230 SSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIICGR 289
           SSDFCHWG RF Y +YD+  G IY+SIE LD MGM +IE  DP +F  YL++Y+N ICGR
Sbjct: 188 SSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGR 247

Query: 290 HSISIYLHM---LKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKV 335
           H I + L+    L+ S   M   FL Y QS++C++ +DSSVSYA+ A  V
Sbjct: 248 HPIGVLLNAITELQKSGMNMSFSFLNYAQSSQCRSWQDSSVSYAAGALTV 296

[Close]

BLAST of CmoCh12G002970 vs. ExPASy Swiss-Prot
Match: Q91VH6 (Protein MEMO1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 4.2e-80
Identity = 148/290 (51.03%), Postives = 195/290 (67.24%), Query Frame = 0


Query: 50  RRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYAFANI 109
           R ASHAGSWY+ +  +L  +L+GWL     +K P  R +IAPHAGY+Y G  AA+A+  +
Sbjct: 8   REASHAGSWYTASGPQLNAQLEGWLSQVQSTKRP-ARAIIAPHAGYTYCGSCAAHAYKQV 67

Query: 110 DPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELMDMLV 169
           DP+   RIF+LGPSHH    +CALS+  IY+TPL DL ID ++  EL  TG FE M +  
Sbjct: 68  DPSVTRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQT 127

Query: 170 DEAEHSMEMHLPYLAKVFEGH--SVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFFSV 229
           DE EHS+EMHLPY AK  E H     ++P+LVGA+S   E  +G+L +KY+ DP+N F V
Sbjct: 128 DEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVV 187

Query: 230 SSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIICGR 289
           SSDFCHWG RF Y +YD+  G IY+SIE LD MGM +IE  DP +F  YL++Y+N ICGR
Sbjct: 188 SSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGR 247

Query: 290 HSISIYLHM---LKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKV 335
           H I + L+    L+ +   M   FL Y QS++C++ +DSSVSYA+ A  V
Sbjct: 248 HPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRSWQDSSVSYAAGALTV 296

[Close]

BLAST of CmoCh12G002970 vs. ExPASy Swiss-Prot
Match: Q9Y316 (Protein MEMO1 OS=Homo sapiens OX=9606 GN=MEMO1 PE=1 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 7.2e-80
Identity = 148/290 (51.03%), Postives = 194/290 (66.90%), Query Frame = 0


Query: 50  RRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYAFANI 109
           R ASHAGSWY+ +  +L  +L+GWL     +K P  R +IAPHAGY+Y G  AA+A+  +
Sbjct: 8   REASHAGSWYTASGPQLNAQLEGWLSQVQSTKRP-ARAIIAPHAGYTYCGSCAAHAYKQV 67

Query: 110 DPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELMDMLV 169
           DP+   RIF+LGPSHH    +CALS+  IY+TPL DL ID ++  EL  TG FE M +  
Sbjct: 68  DPSITRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQT 127

Query: 170 DEAEHSMEMHLPYLAKVFEGH--SVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFFSV 229
           DE EHS+EMHLPY AK  E H     ++P+LVGA+S   E  +G+L +KY+ DP+N F V
Sbjct: 128 DEDEHSIEMHLPYTAKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVV 187

Query: 230 SSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIICGR 289
           SSDFCHWG RF Y +YD+  G IY+SIE LD MGM +IE  DP +F  YL++Y+N ICGR
Sbjct: 188 SSDFCHWGQRFRYSYYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGR 247

Query: 290 HSISIYLHM---LKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKV 335
           H I + L+    L+ +   M   FL Y QS++C+  +DSSVSYA+ A  V
Sbjct: 248 HPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCRNWQDSSVSYAAGALTV 296

[Close]

BLAST of CmoCh12G002970 vs. ExPASy TrEMBL
Match: A0A6J1GHR1 (protein MEMO1-like OS=Cucurbita moschata OX=3662 GN=LOC111454264 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.9e-164
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 46  MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 105
           MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA
Sbjct: 1   MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 60

Query: 106 FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 165
           FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM
Sbjct: 61  FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 120

Query: 166 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 225
           DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF
Sbjct: 121 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 180

Query: 226 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 285
           SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC
Sbjct: 181 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 240

Query: 286 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA 337
           GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA
Sbjct: 241 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA 291

[Close]

BLAST of CmoCh12G002970 vs. ExPASy TrEMBL
Match: A0A6J1KJK6 (protein MEMO1-like OS=Cucurbita maxima OX=3661 GN=LOC111496291 PE=3 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 6.6e-161
Identity = 286/291 (98.28%), Postives = 289/291 (99.31%), Query Frame = 0


Query: 46  MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 105
           MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA
Sbjct: 1   MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 60

Query: 106 FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 165
           FANIDPT ISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM
Sbjct: 61  FANIDPTNISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 120

Query: 166 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 225
           DMLVDEAEHSMEMHLPYLAKVFEGH VKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF
Sbjct: 121 DMLVDEAEHSMEMHLPYLAKVFEGHLVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 180

Query: 226 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 285
           SVSSDFCHWGSRFSYMHYDKK+GAIYKSIEALD+MGMDVIETGDPEAFRMYLQEYNNIIC
Sbjct: 181 SVSSDFCHWGSRFSYMHYDKKYGAIYKSIEALDYMGMDVIETGDPEAFRMYLQEYNNIIC 240

Query: 286 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA 337
           GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRC+TMRDSSVSYASAAAKVDA
Sbjct: 241 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCKTMRDSSVSYASAAAKVDA 291

[Close]

BLAST of CmoCh12G002970 vs. ExPASy TrEMBL
Match: A0A6J1HC03 (protein MEMO1-like OS=Cucurbita moschata OX=3662 GN=LOC111462705 PE=3 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 3.6e-151
Identity = 264/291 (90.72%), Postives = 281/291 (96.56%), Query Frame = 0


Query: 46  MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 105
           ME +RRASHAGSWY+ NSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA
Sbjct: 1   MEKIRRASHAGSWYTDNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 60

Query: 106 FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 165
           F NIDPT ISRIFLLGPSHHYYT KCALSTATIYQTP+GDLPID+EVIEELKATGKFELM
Sbjct: 61  FGNIDPTNISRIFLLGPSHHYYTPKCALSTATIYQTPVGDLPIDLEVIEELKATGKFELM 120

Query: 166 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 225
           DM VDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSA+SEAMYGRLLAKY+DDP NFF
Sbjct: 121 DMRVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAESEAMYGRLLAKYVDDPKNFF 180

Query: 226 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 285
           SVSSDFCHWGSRF+YMHYDKKHGAIYKSIEALDHMGMD+IETGDPEAF+ YLQEY+N IC
Sbjct: 181 SVSSDFCHWGSRFNYMHYDKKHGAIYKSIEALDHMGMDIIETGDPEAFKKYLQEYDNTIC 240

Query: 286 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA 337
           GRH IS++LHMLKHSSTK+KIKFL+YEQS++C+TMRDSSVSYASAAAKVDA
Sbjct: 241 GRHPISVFLHMLKHSSTKIKIKFLRYEQSSQCKTMRDSSVSYASAAAKVDA 291

[Close]

BLAST of CmoCh12G002970 vs. ExPASy TrEMBL
Match: A0A6J1K5B5 (protein MEMO1-like OS=Cucurbita maxima OX=3661 GN=LOC111491810 PE=3 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 1.1e-150
Identity = 263/291 (90.38%), Postives = 281/291 (96.56%), Query Frame = 0


Query: 46  MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 105
           ME +RRASHAGSWY+ NSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA
Sbjct: 1   MEKIRRASHAGSWYTDNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 60

Query: 106 FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 165
           F NIDPT ISRIFLLGPSHHYYT KCALSTATIYQTP+GDLPID+EVIEELKATGKFELM
Sbjct: 61  FGNIDPTNISRIFLLGPSHHYYTPKCALSTATIYQTPVGDLPIDLEVIEELKATGKFELM 120

Query: 166 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 225
           DM VDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSA+SEAMYGRLLAKY+DDP NFF
Sbjct: 121 DMRVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAESEAMYGRLLAKYVDDPKNFF 180

Query: 226 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 285
           SVSSDFCHWGSRF+YMHYDK+HGAIYKSIEALDHMGMD+IETGDPEAF+ YLQEY+N IC
Sbjct: 181 SVSSDFCHWGSRFNYMHYDKEHGAIYKSIEALDHMGMDIIETGDPEAFKKYLQEYDNTIC 240

Query: 286 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA 337
           GRH IS++LHMLKHSSTK+KIKFL+YEQS++C+TMRDSSVSYASAAAKVDA
Sbjct: 241 GRHPISVFLHMLKHSSTKIKIKFLRYEQSSQCKTMRDSSVSYASAAAKVDA 291

[Close]

BLAST of CmoCh12G002970 vs. ExPASy TrEMBL
Match: A0A1S3BD25 (protein MEMO1 OS=Cucumis melo OX=3656 GN=LOC103488326 PE=3 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 4.9e-148
Identity = 259/291 (89.00%), Postives = 277/291 (95.19%), Query Frame = 0


Query: 46  MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 105
           ME +RRASHAGSWY+ NSKKLAEEL+GWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA
Sbjct: 1   MEKIRRASHAGSWYTDNSKKLAEELEGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 60

Query: 106 FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 165
           F NIDPT  SRIFLLGPSHHYYT KC+LSTAT+YQTP+GDLPID+EVIEELKATGKFELM
Sbjct: 61  FGNIDPTNFSRIFLLGPSHHYYTTKCSLSTATVYQTPVGDLPIDLEVIEELKATGKFELM 120

Query: 166 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 225
           DM VDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSA+SEAMYGRLLAKY+DDP NFF
Sbjct: 121 DMHVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAESEAMYGRLLAKYVDDPKNFF 180

Query: 226 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 285
           SVSSDFCHWGSRF+YMHYDKKHG IYKSIEALDHMGMD IETGDPEAF+ YLQEY+N IC
Sbjct: 181 SVSSDFCHWGSRFNYMHYDKKHGPIYKSIEALDHMGMDKIETGDPEAFKKYLQEYDNTIC 240

Query: 286 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVDA 337
           GRH IS++LHMLK SSTKMKIKFL+YEQS++C+TMRDSSVSYASAAAKVDA
Sbjct: 241 GRHPISVFLHMLKQSSTKMKIKFLRYEQSSQCKTMRDSSVSYASAAAKVDA 291

[Close]

BLAST of CmoCh12G002970 vs. TAIR 10
Match: AT2G25280.1 (CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). )

HSP 1 Score: 476.1 bits (1224), Expect = 2.3e-134
Identity = 224/290 (77.24%), Postives = 264/290 (91.03%), Query Frame = 0


Query: 46  MENVRRASHAGSWYSRNSKKLAEELDGWLRASGLSKSPDVRGVIAPHAGYSYSGRAAAYA 105
           ME +R+ +HAGSWY+ N  KL+ +L+ WL A+GL+KSPDVRGVIAPHAGYSYSGRAAAYA
Sbjct: 1   MEKIRQPTHAGSWYTDNPTKLSSDLEEWLNATGLTKSPDVRGVIAPHAGYSYSGRAAAYA 60

Query: 106 FANIDPTTISRIFLLGPSHHYYTKKCALSTATIYQTPLGDLPIDVEVIEELKATGKFELM 165
           FANIDPT ISRIFLLGPSHH+YT KCALSTAT+Y+TP+G+LP+DVE+I+E++A GKF +M
Sbjct: 61  FANIDPTNISRIFLLGPSHHFYTPKCALSTATVYKTPIGNLPVDVEMIKEIRAMGKFGMM 120

Query: 166 DMLVDEAEHSMEMHLPYLAKVFEGHSVKVVPILVGAVSAQSEAMYGRLLAKYMDDPTNFF 225
           D+ VDEAEHSMEMHLPYLAKVFEG++VKVVPILVGAVS ++EAMYG LLAKY+DDP NFF
Sbjct: 121 DLRVDEAEHSMEMHLPYLAKVFEGNNVKVVPILVGAVSPENEAMYGELLAKYVDDPKNFF 180

Query: 226 SVSSDFCHWGSRFSYMHYDKKHGAIYKSIEALDHMGMDVIETGDPEAFRMYLQEYNNIIC 285
           SVSSDFCHWGSRF+YMHYD  HGAI+KSIEALD  GMD+IETGDP+AF+ YL E+ N IC
Sbjct: 181 SVSSDFCHWGSRFNYMHYDNTHGAIHKSIEALDKKGMDIIETGDPDAFKKYLLEFENTIC 240

Query: 286 GRHSISIYLHMLKHSSTKMKIKFLQYEQSNRCQTMRDSSVSYASAAAKVD 336
           GRH ISI+LHMLKHSS+K+KI FL+YEQS++CQTMRDSSVSYASAAAK++
Sbjct: 241 GRHPISIFLHMLKHSSSKIKINFLRYEQSSQCQTMRDSSVSYASAAAKLE 290

The following BLAST results are available for this feature:

BLAST of CmoCh12G002970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GNT9	9.1e-83	52.07	Protein MEMO1 OS=Xenopus laevis OX=8355 GN=memo1 PE=2 SV=1	[more]
Q6DJ03	2.0e-82	52.07	Protein MEMO1 OS=Xenopus tropicalis OX=8364 GN=memo1 PE=2 SV=1	[more]
Q4QQR9	2.5e-80	51.38	Protein MEMO1 OS=Rattus norvegicus OX=10116 GN=Memo1 PE=1 SV=1	[more]
Q91VH6	4.2e-80	51.03	Protein MEMO1 OS=Mus musculus OX=10090 GN=Memo1 PE=1 SV=1	[more]
Q9Y316	7.2e-80	51.03	Protein MEMO1 OS=Homo sapiens OX=9606 GN=MEMO1 PE=1 SV=1	[more]

BLAST of CmoCh12G002970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHR1	4.9e-164	100.00	protein MEMO1-like OS=Cucurbita moschata OX=3662 GN=LOC111454264 PE=3 SV=1	[more]
A0A6J1KJK6	6.6e-161	98.28	protein MEMO1-like OS=Cucurbita maxima OX=3661 GN=LOC111496291 PE=3 SV=1	[more]
A0A6J1HC03	3.6e-151	90.72	protein MEMO1-like OS=Cucurbita moschata OX=3662 GN=LOC111462705 PE=3 SV=1	[more]
A0A6J1K5B5	1.1e-150	90.38	protein MEMO1-like OS=Cucurbita maxima OX=3661 GN=LOC111491810 PE=3 SV=1	[more]
A0A1S3BD25	4.9e-148	89.00	protein MEMO1 OS=Cucumis melo OX=3656 GN=LOC103488326 PE=3 SV=1	[more]

BLAST of CmoCh12G002970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25280.1	2.3e-134	77.24	CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.830.10		coord: 48..334 e-value: 1.0E-111 score: 374.6
None	No IPR available	TIGRFAM	TIGR04336	TIGR04336	coord: 50..331 e-value: 2.3E-56 score: 189.0
None	No IPR available	PANTHER	PTHR11060:SF3	BNAA09G41020D PROTEIN	coord: 46..335
IPR002737	MEMO1 family	PFAM	PF01875	Memo	coord: 52..330 e-value: 6.1E-81 score: 271.5
IPR002737	MEMO1 family	PANTHER	PTHR11060	PROTEIN MEMO1	coord: 46..335
IPR002737	MEMO1 family	HAMAP	MF_00055	MEMO1	coord: 48..333 score: 54.335915
IPR002737	MEMO1 family	CDD	cd07361	MEMO_like	coord: 51..322 e-value: 2.61098E-111 score: 322.604

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G002970.1	CmoCh12G002970.1	mRNA