CmoCh12G002910 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G002910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein, putative
Location	Cmo_Chr12: 1844731 .. 1845933 (+)
RNA-Seq Expression	CmoCh12G002910
Synteny	CmoCh12G002910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTCCGCCGCGAGCCCACTTTCTCTGATCTGTGCTCTGCTTCTTTGCTTGCCTTTAGCCGTTCTCTTTACCGTTAACAGCCCCACCGCCATTAATTCCGTCCAAAATTCCGACCACCCTTTCATTTTCCCTTTGCAGTCACTTTACATGCCTAAGACCCACCGCAAAATTACCCTCTTCCAAATCCCTTCTCCGCCGCCTTCGCCGCCGCCAGAGGAGGATGATTTGTTGTTCCCACTTGCCTCCCGGGTCGACCCGACCCCATCACCAACCCGGAAATTGGCTTTCATGTTTCTCACGAATTCCCCTCTCCCTTTTGCTCCTCTTTGGGAACTGTTCTTCAAAAACATCCCCCCGGATCTTTACAATGTTTACATCCACGCTGACCCGACCCGAGAATATGACCCGCCTTTCTCCGGCGTGTTTTCCCACCGTGTCATCCCGTCGAAACCCACTCAGAGATTCACCCCTTCTCTAACCGCCGCCGCCCGCCGCCTTCTCGCCCACGCGCTGCTGCATGATTCTTCTAATTCCATGTTTGCCCTTCTCTCCCCCTCTTGCATCCCTCTTCATTCCTTCAATTTCACTTACAAAACGCTAATCCACTCCAAGAAGAGCTTCATCGAGGTTCTCAAAAATGAAATCGGTGCCTACGACAGATGGGCGGCGCGTGGTCCCGACGCGATGCTTCCCGTTGTTAAATTGGAGGATTTACGAATTGGGTCACAGTTTTGGGTCCTCACGCGTCGGCACGCGCGGACTGTAGTGAGAGATAAGAAAGTTTGGTCAAAGTTTGACTTACCATGCGTGCGGTGGGACACGTGTTATCCAGAGGAGAATTATTTCCCCACCTTACTCAGCATGTGGGACCACCGAGGACTTATTCCAGCTACACTAACACACGTGGACTGGAATGGGAGTTTCGATGGCCACCCTCGCACGTACGACAAATCTGACGTCACACCCAATCTCATACGTTCTCTGAGAATGTCCCGCCTCAGATACGGCGACGGCGACGGCGCCGGCGGCATTGAAATGAGAATCAGAACGAGAACTAAAACCTCCGGCCGCCGTAGTTCGTCGTCTTCCTCCGCCGCTAAACATTACCGCCGGCATACGTTCCTCTTTGCTAGGAAATTCTCCGCCGATACGCTCCAGCCGTTGATGAACATATCCAGCGACGTCATCTTTAAAGATTGA

mRNA sequence

ATGATGTCCGCCGCGAGCCCACTTTCTCTGATCTGTGCTCTGCTTCTTTGCTTGCCTTTAGCCGTTCTCTTTACCGTTAACAGCCCCACCGCCATTAATTCCGTCCAAAATTCCGACCACCCTTTCATTTTCCCTTTGCAGTCACTTTACATGCCTAAGACCCACCGCAAAATTACCCTCTTCCAAATCCCTTCTCCGCCGCCTTCGCCGCCGCCAGAGGAGGATGATTTGTTGTTCCCACTTGCCTCCCGGGTCGACCCGACCCCATCACCAACCCGGAAATTGGCTTTCATGTTTCTCACGAATTCCCCTCTCCCTTTTGCTCCTCTTTGGGAACTGTTCTTCAAAAACATCCCCCCGGATCTTTACAATGTTTACATCCACGCTGACCCGACCCGAGAATATGACCCGCCTTTCTCCGGCGTGTTTTCCCACCGTGTCATCCCGTCGAAACCCACTCAGAGATTCACCCCTTCTCTAACCGCCGCCGCCCGCCGCCTTCTCGCCCACGCGCTGCTGCATGATTCTTCTAATTCCATGTTTGCCCTTCTCTCCCCCTCTTGCATCCCTCTTCATTCCTTCAATTTCACTTACAAAACGCTAATCCACTCCAAGAAGAGCTTCATCGAGGTTCTCAAAAATGAAATCGGTGCCTACGACAGATGGGCGGCGCGTGGTCCCGACGCGATGCTTCCCGTTGTTAAATTGGAGGATTTACGAATTGGGTCACAGTTTTGGGTCCTCACGCGTCGGCACGCGCGGACTGTAGTGAGAGATAAGAAAGTTTGGTCAAAGTTTGACTTACCATGCGTGCGGTGGGACACGTGTTATCCAGAGGAGAATTATTTCCCCACCTTACTCAGCATGTGGGACCACCGAGGACTTATTCCAGCTACACTAACACACGTGGACTGGAATGGGAGTTTCGATGGCCACCCTCGCACGTACGACAAATCTGACGTCACACCCAATCTCATACGTTCTCTGAGAATGTCCCGCCTCAGATACGGCGACGGCGACGGCGCCGGCGGCATTGAAATGAGAATCAGAACGAGAACTAAAACCTCCGGCCGCCGTAGTTCGTCGTCTTCCTCCGCCGCTAAACATTACCGCCGGCATACGTTCCTCTTTGCTAGGAAATTCTCCGCCGATACGCTCCAGCCGTTGATGAACATATCCAGCGACGTCATCTTTAAAGATTGA

Coding sequence (CDS)

ATGATGTCCGCCGCGAGCCCACTTTCTCTGATCTGTGCTCTGCTTCTTTGCTTGCCTTTAGCCGTTCTCTTTACCGTTAACAGCCCCACCGCCATTAATTCCGTCCAAAATTCCGACCACCCTTTCATTTTCCCTTTGCAGTCACTTTACATGCCTAAGACCCACCGCAAAATTACCCTCTTCCAAATCCCTTCTCCGCCGCCTTCGCCGCCGCCAGAGGAGGATGATTTGTTGTTCCCACTTGCCTCCCGGGTCGACCCGACCCCATCACCAACCCGGAAATTGGCTTTCATGTTTCTCACGAATTCCCCTCTCCCTTTTGCTCCTCTTTGGGAACTGTTCTTCAAAAACATCCCCCCGGATCTTTACAATGTTTACATCCACGCTGACCCGACCCGAGAATATGACCCGCCTTTCTCCGGCGTGTTTTCCCACCGTGTCATCCCGTCGAAACCCACTCAGAGATTCACCCCTTCTCTAACCGCCGCCGCCCGCCGCCTTCTCGCCCACGCGCTGCTGCATGATTCTTCTAATTCCATGTTTGCCCTTCTCTCCCCCTCTTGCATCCCTCTTCATTCCTTCAATTTCACTTACAAAACGCTAATCCACTCCAAGAAGAGCTTCATCGAGGTTCTCAAAAATGAAATCGGTGCCTACGACAGATGGGCGGCGCGTGGTCCCGACGCGATGCTTCCCGTTGTTAAATTGGAGGATTTACGAATTGGGTCACAGTTTTGGGTCCTCACGCGTCGGCACGCGCGGACTGTAGTGAGAGATAAGAAAGTTTGGTCAAAGTTTGACTTACCATGCGTGCGGTGGGACACGTGTTATCCAGAGGAGAATTATTTCCCCACCTTACTCAGCATGTGGGACCACCGAGGACTTATTCCAGCTACACTAACACACGTGGACTGGAATGGGAGTTTCGATGGCCACCCTCGCACGTACGACAAATCTGACGTCACACCCAATCTCATACGTTCTCTGAGAATGTCCCGCCTCAGATACGGCGACGGCGACGGCGCCGGCGGCATTGAAATGAGAATCAGAACGAGAACTAAAACCTCCGGCCGCCGTAGTTCGTCGTCTTCCTCCGCCGCTAAACATTACCGCCGGCATACGTTCCTCTTTGCTAGGAAATTCTCCGCCGATACGCTCCAGCCGTTGATGAACATATCCAGCGACGTCATCTTTAAAGATTGA

Protein sequence

MMSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLFQIPSPPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNVYIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD

Homology

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BLAST of CmoCh12G002910 vs. ExPASy Swiss-Prot
Match: Q65XS5 (Glycosyltransferase BC10 OS=Oryza sativa subsp. japonica OX=39947 GN=BC10 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 7.6e-28
Identity = 105/341 (30.79%), Postives = 158/341 (46.33%), Query Frame = 0


Query: 87  PTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNVYIHADP----TREYDPPFSGV 146
           P P    +LAF+F+  + LP   +W+ FF+      +++++H+ P    TR      SG 
Sbjct: 78  PLPPGNARLAFLFIARNRLPLDLVWDAFFRGDKEGRFSIFVHSRPGFVLTRA--TTRSGF 137

Query: 147 FSHR-VIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLSPSCIPLHSFNFTYKTL 206
           F +R V  S        S+  A R LLAHA L D  N  F  +S SC+PL++FN+TY  +
Sbjct: 138 FYNRQVNNSVQVDWGEASMIEAERVLLAHA-LKDPLNERFVFVSDSCVPLYNFNYTYDYI 197

Query: 207 IHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQFWVLTRRHARTVVRDKK 266
           + S  SF++         D  A R    M P++ +E+ R GSQ+ VLTR+HA  VV D++
Sbjct: 198 MSSSTSFVDSFA------DTKAGRYNPRMDPIIPVENWRKGSQWAVLTRKHAEVVVEDEE 257

Query: 267 VWSKFDLPCVR---------WD-----------TCYPEENYFPTLLSMWD-HRGLIPATL 326
           V  +F   C R         WD            C P+E+Y  TLL+       L   ++
Sbjct: 258 VLPEFQKHCRRRPLPEFWRDWDRPIPAEAWKAHNCIPDEHYVQTLLAQHGLEEELTRRSV 317

Query: 327 THVDWNGSFD-------GHPRTYDKSDVTPNLIRSLR-MSRLRYGDGDGAGGIEMRIRTR 386
           TH  W+ S          HP TY  SD TP L++S++ +  + Y                
Sbjct: 318 THSAWDLSSSKDRERRGWHPVTYKISDATPALVKSIKDIDNIYY---------------- 377

Query: 387 TKTSGRRSSSSSSAAKHYRRHTFLFARKFSADTLQPLMNIS 394
            +T  R+   +S+         FLFARKF+      L+++S
Sbjct: 378 -ETENRKEWCTSNGKP---APCFLFARKFTRAAGLKLLDLS 389

[Close]

BLAST of CmoCh12G002910 vs. ExPASy TrEMBL
Match: A0A6J1GHM6 (uncharacterized protein LOC111454260 OS=Cucurbita moschata OX=3662 GN=LOC111454260 PE=4 SV=1)

HSP 1 Score: 813.9 bits (2101), Expect = 2.9e-232
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 0


Query: 1   MMSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITL 60
           MMSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITL
Sbjct: 1   MMSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITL 60

Query: 61  FQIPSPPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPP 120
           FQIPSPPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPP
Sbjct: 61  FQIPSPPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPP 120

Query: 121 DLYNVYIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSM 180
           DLYNVYIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSM
Sbjct: 121 DLYNVYIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSM 180

Query: 181 FALLSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLR 240
           FALLSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLR
Sbjct: 181 FALLSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLR 240

Query: 241 IGSQFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATL 300
           IGSQFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATL
Sbjct: 241 IGSQFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATL 300

Query: 301 THVDWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRS 360
           THVDWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRS
Sbjct: 301 THVDWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRS 360

Query: 361 SSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
           SSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD
Sbjct: 361 SSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 400

[Close]

BLAST of CmoCh12G002910 vs. ExPASy TrEMBL
Match: A0A6J1KJC2 (uncharacterized protein LOC111496232 OS=Cucurbita maxima OX=3661 GN=LOC111496232 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 7.0e-218
Identity = 380/401 (94.76%), Postives = 387/401 (96.51%), Query Frame = 0


Query: 2   MSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLF 61
           MSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLF
Sbjct: 1   MSAASPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLF 60

Query: 62  QIPS--PPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIP 121
           QIPS  PPP PPPEEDDLLFPLA+RVDP PSPTRKLAFMFLTNSPLPFAPLWELFFKNIP
Sbjct: 61  QIPSPPPPPPPPPEEDDLLFPLAARVDPNPSPTRKLAFMFLTNSPLPFAPLWELFFKNIP 120

Query: 122 PDLYNVYIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNS 181
           PDLYNVYIH DPTREYDPPFSGVFSHRVIPSKPTQRFT SLTAAARRLLAHALLHDSSNS
Sbjct: 121 PDLYNVYIHDDPTREYDPPFSGVFSHRVIPSKPTQRFTSSLTAAARRLLAHALLHDSSNS 180

Query: 182 MFALLSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDL 241
           MFALLSPSCIPLHSFNFTYKTLI SKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDL
Sbjct: 181 MFALLSPSCIPLHSFNFTYKTLIRSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDL 240

Query: 242 RIGSQFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPAT 301
           RIGSQFW LTRRHARTVV+DKKVW+KFDLPCVRWDTCYPEENYFPTLLSMWD +GLIPAT
Sbjct: 241 RIGSQFWALTRRHARTVVKDKKVWTKFDLPCVRWDTCYPEENYFPTLLSMWDRQGLIPAT 300

Query: 302 LTHVDWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRR 361
           LTHVDWNG FDGHPRTYDK+DVTPNLIRSLRM+RLRYGDGD   GIEMRI T+TKTSGRR
Sbjct: 301 LTHVDWNGRFDGHPRTYDKADVTPNLIRSLRMARLRYGDGD--AGIEMRIGTKTKTSGRR 360

Query: 362 SSSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
           SSSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD
Sbjct: 361 SSSSSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 399

[Close]

BLAST of CmoCh12G002910 vs. ExPASy TrEMBL
Match: A0A5A7VHH3 (Putative Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002370 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 5.3e-165
Identity = 297/395 (75.19%), Postives = 330/395 (83.54%), Query Frame = 0


Query: 6   SPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLFQIPS 65
           +PLSLI ALLLCL LA+ FT ++PT   ++ + D+PFIFP QSLY    HRKITL    S
Sbjct: 5   NPLSLIFALLLCLSLAIFFTTHTPT--TTMNSIDYPFIFPFQSLYASNIHRKITL----S 64

Query: 66  PPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNV 125
           PP  PPPE+DDLLFPLA+ V+ TPSPT KLAF+FLTNSPLPFAPLWELFFKNIPPDL+NV
Sbjct: 65  PPSPPPPEDDDLLFPLAAGVNSTPSPTHKLAFLFLTNSPLPFAPLWELFFKNIPPDLFNV 124

Query: 126 YIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLS 185
           YIHADPTR YDPPFSGVF++RVIPSKPTQRF+PSL+ AARRLLAHALLHDS+NSMFALLS
Sbjct: 125 YIHADPTRCYDPPFSGVFANRVIPSKPTQRFSPSLSDAARRLLAHALLHDSANSMFALLS 184

Query: 186 PSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQF 245
           PSCIPLHSFNFTYKTLI SKKSFIEVLK+E GAYDRWAARGPD MLP+VKL D RIGSQF
Sbjct: 185 PSCIPLHSFNFTYKTLISSKKSFIEVLKSEFGAYDRWAARGPDVMLPIVKLADFRIGSQF 244

Query: 246 WVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDW 305
           WVL RRHAR VV+DK VWSKFDLPCVR DTCYPEENYFPTLLSMWD RGL+PATLTHV+W
Sbjct: 245 WVLKRRHARIVVKDKTVWSKFDLPCVRQDTCYPEENYFPTLLSMWDRRGLVPATLTHVNW 304

Query: 306 NGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSS 365
           NGSFDGHPRTY  SDV P+LIR LR +R RYGD    GG  M++R RT+  G R     S
Sbjct: 305 NGSFDGHPRTYVASDVGPDLIRGLRTARPRYGD----GGRRMKVRIRTRKGGGR---IVS 364

Query: 366 AAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
             K+  +H FLFARKFSAD+L  LMNI++D I KD
Sbjct: 365 VGKYQHQHPFLFARKFSADSLHRLMNITNDFILKD 386

[Close]

BLAST of CmoCh12G002910 vs. ExPASy TrEMBL
Match: A0A1S3BC61 (uncharacterized protein LOC103488317 OS=Cucumis melo OX=3656 GN=LOC103488317 PE=4 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 5.3e-165
Identity = 297/395 (75.19%), Postives = 330/395 (83.54%), Query Frame = 0


Query: 6   SPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLFQIPS 65
           +PLSLI ALLLCL LA+ FT ++PT   ++ + D+PFIFP QSLY    HRKITL    S
Sbjct: 5   NPLSLIFALLLCLSLAIFFTTHTPT--TTMNSIDYPFIFPFQSLYASNIHRKITL----S 64

Query: 66  PPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNV 125
           PP  PPPE+DDLLFPLA+ V+ TPSPT KLAF+FLTNSPLPFAPLWELFFKNIPPDL+NV
Sbjct: 65  PPSPPPPEDDDLLFPLAAGVNSTPSPTHKLAFLFLTNSPLPFAPLWELFFKNIPPDLFNV 124

Query: 126 YIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLS 185
           YIHADPTR YDPPFSGVF++RVIPSKPTQRF+PSL+ AARRLLAHALLHDS+NSMFALLS
Sbjct: 125 YIHADPTRCYDPPFSGVFANRVIPSKPTQRFSPSLSDAARRLLAHALLHDSANSMFALLS 184

Query: 186 PSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQF 245
           PSCIPLHSFNFTYKTLI SKKSFIEVLK+E GAYDRWAARGPD MLP+VKL D RIGSQF
Sbjct: 185 PSCIPLHSFNFTYKTLISSKKSFIEVLKSEFGAYDRWAARGPDVMLPIVKLADFRIGSQF 244

Query: 246 WVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDW 305
           WVL RRHAR VV+DK VWSKFDLPCVR DTCYPEENYFPTLLSMWD RGL+PATLTHV+W
Sbjct: 245 WVLKRRHARIVVKDKTVWSKFDLPCVRQDTCYPEENYFPTLLSMWDRRGLVPATLTHVNW 304

Query: 306 NGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSS 365
           NGSFDGHPRTY  SDV P+LIR LR +R RYGD    GG  M++R RT+  G R     S
Sbjct: 305 NGSFDGHPRTYVASDVGPDLIRGLRTARPRYGD----GGRRMKVRIRTRKGGGR---IVS 364

Query: 366 AAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
             K+  +H FLFARKFSAD+L  LMNI++D I KD
Sbjct: 365 VGKYQHQHPFLFARKFSADSLHRLMNITNDFILKD 386

[Close]

BLAST of CmoCh12G002910 vs. ExPASy TrEMBL
Match: A0A0A0LQ94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381820 PE=4 SV=1)

HSP 1 Score: 581.3 bits (1497), Expect = 3.2e-162
Identity = 294/395 (74.43%), Postives = 327/395 (82.78%), Query Frame = 0


Query: 6   SPLSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLFQIPS 65
           +P SLI ALLLCL LA+ FT+N+PT   ++ + D+PFIFP QSLY    HRKIT    PS
Sbjct: 5   NPFSLIFALLLCLSLALFFTINTPT--TTINSFDYPFIFPFQSLYTSNIHRKIT----PS 64

Query: 66  PPPSPPPEEDDLLFPLASRVDPTPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNV 125
           PP   PPE+DDLLFPLA+ V+ TPSPT KLAF+FLTNSPLPFAPLWELFF+NIPPDL+N+
Sbjct: 65  PPSPLPPEDDDLLFPLAAGVNSTPSPTHKLAFLFLTNSPLPFAPLWELFFENIPPDLFNI 124

Query: 126 YIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLS 185
           YIHADPTR YDPPFSGVF++RVIPSKPTQR +PSL+AAARRLLAHALLHDS+NSMFALLS
Sbjct: 125 YIHADPTRYYDPPFSGVFANRVIPSKPTQRNSPSLSAAARRLLAHALLHDSANSMFALLS 184

Query: 186 PSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQF 245
           PSCIPLHSFNFTYKTLI SKKSFIEVLK+E+GAYDRWAARGPD MLPVVKL D RIGSQF
Sbjct: 185 PSCIPLHSFNFTYKTLIRSKKSFIEVLKSELGAYDRWAARGPDVMLPVVKLADFRIGSQF 244

Query: 246 WVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDW 305
           WVL RRHA  VVRDK VWSKFDLPCVR DTCYPEENYFPTLLSMWD RGL+PATLTHV+W
Sbjct: 245 WVLRRRHAWIVVRDKTVWSKFDLPCVRLDTCYPEENYFPTLLSMWDRRGLVPATLTHVNW 304

Query: 306 NGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSS 365
           NGS DGHPRTY  SDV P+LIR LR +R RYGD    GG  M++R  T+  G R     S
Sbjct: 305 NGSVDGHPRTYVASDVGPDLIRGLRTARPRYGD----GGRRMKVRIGTRRGGGR---IVS 364

Query: 366 AAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
              + R+H FLFARKFSA +L  LMNI+SD IFKD
Sbjct: 365 VGTYQRQHPFLFARKFSAHSLHRLMNITSDFIFKD 386

[Close]

BLAST of CmoCh12G002910 vs. TAIR 10
Match: AT4G32290.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 410.6 bits (1054), Expect = 1.4e-114
Identity = 219/397 (55.16%), Postives = 271/397 (68.26%), Query Frame = 0


Query: 10  LICALLLCLPLAVLFTVNSPTAINSVQNSDHPF----IFPLQSLYMPKTHRKITLFQIPS 69
           L+CAL LCLP+AV+FTV     +  V + +  F    +F L S  +P +       +I  
Sbjct: 9   LLCALFLCLPVAVIFTVQ--RELTCVISPEFGFRSLSVFSLYSRNVPDSSSSSPAVRI-- 68

Query: 70  PPPSPPPEEDDLLFPLASRVDPT--PSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLY 129
               P P+EDD L  L+SRV+P   P  TRK+AFM+LT SPLPFAPLWE+FF  I  +LY
Sbjct: 69  --RQPIPKEDDPLLRLSSRVNPNLPPGSTRKIAFMYLTTSPLPFAPLWEMFFDGISKNLY 128

Query: 130 NVYIHADPTREYDPPFSGVFSHRVIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFAL 189
           NVY+HADPTREYDPPFSGVF +RVI SKP+ R TP+LTAAARRLLAHALL D  N MFA+
Sbjct: 129 NVYVHADPTREYDPPFSGVFLNRVIHSKPSLRHTPTLTAAARRLLAHALLDDPLNYMFAV 188

Query: 190 LSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGS 249
           +SPSC+P+ SF+FTYKTL+ S+KSFIE+LK+E   +DRW A G  AMLP VKLE+ RIGS
Sbjct: 189 ISPSCVPIRSFDFTYKTLVSSRKSFIEILKDEPWQFDRWTAIGRHAMLPEVKLEEFRIGS 248

Query: 250 QFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHV 309
           QFWVL RRHAR V RD+++W KF+  CVR D+CYPEE+YFPTLL+M D RG +PATLTHV
Sbjct: 249 QFWVLKRRHARVVARDRRIWVKFNQTCVREDSCYPEESYFPTLLNMRDPRGCVPATLTHV 308

Query: 310 DWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSS 369
           DW  +  GHPR Y+  +V P L+  LR +R RYG+ DG  G E                 
Sbjct: 309 DWTVNDGGHPRMYEPEEVVPELVLRLRKTRPRYGE-DGINGSEW---------------- 368

Query: 370 SSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
              +K  R   FLFARKFS   L+PL+ ++  V+F D
Sbjct: 369 ---SKVERMDPFLFARKFSPQALEPLLGMARTVLFND 379

[Close]

BLAST of CmoCh12G002910 vs. TAIR 10
Match: AT5G25330.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 362.1 bits (928), Expect = 5.9e-100
Identity = 206/398 (51.76%), Postives = 255/398 (64.07%), Query Frame = 0


Query: 8   LSLICALLLCLPLAVLFTVNSPTAINSVQNSDHPFIFPLQSLYMPKTHRKITLFQIPSPP 67
           L+L   LL+C+PL V+ TV SP    +V  +  P +  +Q+      +  +T  Q+ +  
Sbjct: 2   LALYFILLVCVPLGVIMTVTSPRLAITVAVT-QPAVLIIQN-----PNNNLTSPQVIT-- 61

Query: 68  PSPPPEEDDLLFPLASRVDPTPSP--TRKLAFMFLTNSPLPFAPLWELFFKNIP--PDLY 127
            S P + D+LL   AS+ +P PSP   +KLAFMFLT + LP APLWELFF        LY
Sbjct: 62  -SQPLDHDELLLRQASKANPNPSPKFPKKLAFMFLTTNSLPLAPLWELFFNQSSHHKSLY 121

Query: 128 NVYIHADPTREYDPPFSGVFSHRVIP-SKPTQRFTPSLTAAARRLLAHALLHDSSNSMFA 187
           NVY+H DPT+++ P   G F +R+IP SKP  R TP+L +AARRLLAHALL D SN MF 
Sbjct: 122 NVYVHVDPTQKHKPGSHGTFQNRIIPSSKPAYRHTPTLISAARRLLAHALLEDPSNYMFI 181

Query: 188 LLSPSCIPLHSFNFTYKTLIHSKKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIG 247
           LLSPSCIPLHSFNFTYKTL+ S KSFIE+LK+E G Y+RWAARGP AM P V  E+ RIG
Sbjct: 182 LLSPSCIPLHSFNFTYKTLVSSTKSFIEILKDEPGWYERWAARGPYAMFPEVPPEEFRIG 241

Query: 248 SQFWVLTRRHARTVVRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTH 307
           SQFW LTR HA  VV D ++WSKF+  CVR D CYPEE+YFPTLL+M D +G + AT+TH
Sbjct: 242 SQFWTLTRAHALMVVSDVEIWSKFNKSCVREDICYPEEHYFPTLLNMRDPQGCVSATVTH 301

Query: 308 VDWNGSFDGHPRTYDKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSS 367
           VDW+ +  GHPRTY   +V   LI+ LR +R RYGDG+           RT         
Sbjct: 302 VDWSVNDHGHPRTYKPLEVRAELIQKLRSARPRYGDGN-----------RT--------- 361

Query: 368 SSSAAKHYRRHTFLFARKFSADTLQPLMNISSDVIFKD 401
                   R+  FLFARKFS   +  LMNI+  VIF D
Sbjct: 362 --------RKDPFLFARKFSPAGINQLMNITRSVIFND 362

[Close]

BLAST of CmoCh12G002910 vs. TAIR 10
Match: AT3G52060.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 276.2 bits (705), Expect = 4.2e-74
Identity = 148/316 (46.84%), Postives = 200/316 (63.29%), Query Frame = 0


Query: 88  TPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNVYIHADPTREYDPPF-SGVFSHR 147
           +P+P  K+AF+FLTNS L F PLWE FF+    DLYNVYIHADPT    P   S   + +
Sbjct: 69  SPNPPPKIAFLFLTNSDLTFLPLWESFFQG-HQDLYNVYIHADPTSSVSPLLDSSSINAK 128

Query: 148 VIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLSPSCIPLHSFNFTYKTLI--HS 207
            IP++ T R +P+L +A RRLLA+A+L D +N  FAL+S  CIPLHSF++ +  L   H 
Sbjct: 129 FIPARRTARASPTLISAERRLLANAILDDPNNLYFALISQHCIPLHSFSYIHNHLFSDHH 188

Query: 208 KKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQFWVLTRRHARTVVRDKKVWS 267
           ++SFIE+L +E     R+ ARG DAMLP ++ +D R+GSQF+VL +RHA  V++++K+W 
Sbjct: 189 QQSFIEILSDEPFLLKRYNARGDDAMLPEIQYQDFRVGSQFFVLAKRHALMVIKERKLWR 248

Query: 268 KFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDWNGSFDGHPRTYDKSDVTPN 327
           KF LPC+  ++CYPEE+YFPTLLS+ D +G    TLT V+W GS  GHP TYD S+++P 
Sbjct: 249 KFKLPCLDVESCYPEEHYFPTLLSLEDPQGCSHFTLTRVNWTGSVGGHPHTYDASEISPQ 308

Query: 328 LIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSSAAKHYRRHTFLFARKFSAD 387
           LI SL                            RRS+SS           + FARKF+ +
Sbjct: 309 LIHSL----------------------------RRSNSSLD---------YFFARKFTPE 346

Query: 388 TLQPLMNISSDVIFKD 401
           +LQPLM I+  VIF+D
Sbjct: 369 SLQPLMEIADAVIFRD 346

[Close]

BLAST of CmoCh12G002910 vs. TAIR 10
Match: AT3G52060.2 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 276.2 bits (705), Expect = 4.2e-74
Identity = 148/316 (46.84%), Postives = 200/316 (63.29%), Query Frame = 0


Query: 88  TPSPTRKLAFMFLTNSPLPFAPLWELFFKNIPPDLYNVYIHADPTREYDPPF-SGVFSHR 147
           +P+P  K+AF+FLTNS L F PLWE FF+    DLYNVYIHADPT    P   S   + +
Sbjct: 69  SPNPPPKIAFLFLTNSDLTFLPLWESFFQG-HQDLYNVYIHADPTSSVSPLLDSSSINAK 128

Query: 148 VIPSKPTQRFTPSLTAAARRLLAHALLHDSSNSMFALLSPSCIPLHSFNFTYKTLI--HS 207
            IP++ T R +P+L +A RRLLA+A+L D +N  FAL+S  CIPLHSF++ +  L   H 
Sbjct: 129 FIPARRTARASPTLISAERRLLANAILDDPNNLYFALISQHCIPLHSFSYIHNHLFSDHH 188

Query: 208 KKSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQFWVLTRRHARTVVRDKKVWS 267
           ++SFIE+L +E     R+ ARG DAMLP ++ +D R+GSQF+VL +RHA  V++++K+W 
Sbjct: 189 QQSFIEILSDEPFLLKRYNARGDDAMLPEIQYQDFRVGSQFFVLAKRHALMVIKERKLWR 248

Query: 268 KFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDWNGSFDGHPRTYDKSDVTPN 327
           KF LPC+  ++CYPEE+YFPTLLS+ D +G    TLT V+W GS  GHP TYD S+++P 
Sbjct: 249 KFKLPCLDVESCYPEEHYFPTLLSLEDPQGCSHFTLTRVNWTGSVGGHPHTYDASEISPQ 308

Query: 328 LIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSSAAKHYRRHTFLFARKFSAD 387
           LI SL                            RRS+SS           + FARKF+ +
Sbjct: 309 LIHSL----------------------------RRSNSSLD---------YFFARKFTPE 346

Query: 388 TLQPLMNISSDVIFKD 401
           +LQPLM I+  VIF+D
Sbjct: 369 SLQPLMEIADAVIFRD 346

[Close]

BLAST of CmoCh12G002910 vs. TAIR 10
Match: AT5G22070.1 (Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein )

HSP 1 Score: 253.4 bits (646), Expect = 2.9e-67
Identity = 154/384 (40.10%), Postives = 203/384 (52.86%), Query Frame = 0


Query: 58  ITLFQIPSPPPSPPPEEDDLLFPLASRVDP-------------------TPSPTRKLAFM 117
           +  F  P   PSPP E    L P++  +D                     P+P  K+AF+
Sbjct: 19  VFFFVAPHVFPSPPGES---LIPISDEIDDRSLFIAAAGSTSLSHLSSGNPNPKLKIAFL 78

Query: 118 FLTNSPLPFAPLWELFFKNIPPDLYNVYIHADPTREYDPPFSG-VFSHRVIP-SKPTQRF 177
           FLTNS L FAP+W+ FF      LYNVY+HADP      P +G VF +  I  +K T R 
Sbjct: 79  FLTNSDLHFAPIWDRFFSGHSKSLYNVYVHADPFVNVTRPGNGSVFENAFIANAKRTARA 138

Query: 178 TPSLTAAARRLLAHALLHDSSNSMFALLSPSCIPLHSFNFTYKTLIHSK----------- 237
           +P+L +A RRLLA A L D +N+ FA+LS  CIPLHSFN+ Y +L  S            
Sbjct: 139 SPTLISATRRLLATAFLDDPANTYFAVLSQYCIPLHSFNYVYSSLFESSIFDKSDPDPNP 198

Query: 238 ---------KSFIEVLKNEIGAYDRWAARGPDAMLPVVKLEDLRIGSQFWVLTRRHARTV 297
                    +SF+E++ +E   + R+ ARG  AM+P V  E  R+GSQF+V+TRRHA   
Sbjct: 199 NPRGIRILYRSFMELISDEPRLWKRYTARGRYAMMPEVPFEKFRVGSQFFVMTRRHALLT 258

Query: 298 VRDKKVWSKFDLPCVRWDTCYPEENYFPTLLSMWDHRGLIPATLTHVDWNGSFDGHPRTY 357
           ++D+ +W KF LPC R D CYPEE+YFPTLL+M D  G    TLT V+W G+  GHP TY
Sbjct: 259 IKDRILWRKFKLPCYRSDECYPEEHYFPTLLNMKDPDGCTGYTLTRVNWTGTVKGHPYTY 318

Query: 358 DKSDVTPNLIRSLRMSRLRYGDGDGAGGIEMRIRTRTKTSGRRSSSSSSAAKHYRRHTFL 401
              +V P LI+ L                            RRS+ SSS         + 
Sbjct: 319 KPKEVVPELIQRL----------------------------RRSNHSSS---------YF 362

The following BLAST results are available for this feature:

BLAST of CmoCh12G002910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q65XS5	7.6e-28	30.79	Glycosyltransferase BC10 OS=Oryza sativa subsp. japonica OX=39947 GN=BC10 PE=1 S...	[more]

BLAST of CmoCh12G002910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GHM6	2.9e-232	100.00	uncharacterized protein LOC111454260 OS=Cucurbita moschata OX=3662 GN=LOC1114542...	[more]
A0A6J1KJC2	7.0e-218	94.76	uncharacterized protein LOC111496232 OS=Cucurbita maxima OX=3661 GN=LOC111496232...	[more]
A0A5A7VHH3	5.3e-165	75.19	Putative Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family prot...	[more]
A0A1S3BC61	5.3e-165	75.19	uncharacterized protein LOC103488317 OS=Cucumis melo OX=3656 GN=LOC103488317 PE=...	[more]
A0A0A0LQ94	3.2e-162	74.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381820 PE=4 SV=1	[more]

BLAST of CmoCh12G002910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32290.1	1.4e-114	55.16	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT5G25330.1	5.9e-100	51.76	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT3G52060.1	4.2e-74	46.84	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT3G52060.2	4.2e-74	46.84	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]
AT5G22070.1	2.9e-67	40.10	Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003406	Glycosyl transferase, family 14	PFAM	PF02485	Branch	coord: 95..329 e-value: 1.0E-65 score: 221.7
None	No IPR available	PANTHER	PTHR31042:SF60	CORE-2/I-BRANCHING ENZYME	coord: 5..400
IPR044174	Glycosyltransferase BC10-like	PANTHER	PTHR31042	CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED	coord: 5..400

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G002910.1	CmoCh12G002910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0016757	glycosyltransferase activity