CmoCh12G002850 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G002850
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent RNA helicase
Location	Cmo_Chr12: 1809619 .. 1814058 (-)
RNA-Seq Expression	CmoCh12G002850
Synteny	CmoCh12G002850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTTCGCTCTTCCTCCACACTGCGCTCTGCGATTCCTCGAGAGGCAGGTCTTAACACTTTTAGTTTTCCTTTGCAGACTTTGTGAAATCGCAACCCTAACTCTTAAGTTGAGTTCTTAGCAGGCTAACAGGTAATTTCAATCTTTGTGTTAGAAAGCACTAATCTCTCGTTCTTACTGTTTTAAACCCTAGTTTCGTTGTTGGGTTGGATTTGGTTTTTCGTGAACTTGGAATGAAATTGAATTCGTTCTCTGGTTTTATGTTTAGGAAGAAATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTATGAGGAAGAGGAAGAGAAGGCACCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGTGAGTAGTCTTCTTGAGCACCATTTCTAATCTTTTTATTTTTAGGCTTTTGCATATGGATTTGGAAATTATGGGTCGAATAGTTCCCTACGGTGTCTTGGATGCGTGTTTTGAGAAAATTTTAGATTTGGAAGTAATTCTGTTCGTCTGGTTTAGTTTGGAGTTAGAGCGGTTGGAATATGTAGCTGTTTGAGCTTGCAGTGAACTAAAAAACGATGATTTATTCTTCCTACTATGTCTTTCGTGCAGATTATGATTTTATATCGATGTGTTGGTTTTTTCCCCATGGAATGTCGCTCTTTTTGTTGTTGTTTTTGTTATAGATCCTTACCTTCTTTCACTGTCTTCTTTCTCAGGGGTTATGTTGGAATTCACAGTTCGGGATTCAGAGACTTCCTATTGAAGCCGGAGCTTCTCCGTGCTATTGTGGACTCGGGATTTGAGCATCCATCTGAAGGCAAATTTCTATTTTTTTTTTTAATTTTCAATTGTTGAATCTTAAACCAAAGTGGAAGTGAATACAATTAAAATTGGGACAATTACTCTTAAATTTTCTATAAACTTGATCTTTTTGACCTACGATACAGTAGTTCACTTATTTCTCTGTGTTCACTACCTTAAAATTTTGTTGCCTTGAGAACACTTGTACTTCTCAACCTAAGGGGCTATTTAATGTCAGTCTAACTAAACACAATTTCCAATAATTTATCATCCAAACACTGCTTAAAGTATGCTATTGTGTTTCAAATAGTGAGAAATATCTTGACACCTTTTTTGGACAGTATAATTCATGGATGAGAACACACTTGCACATCAATTTGGAAACAATGTCTTTTTAGAATATGCTATTTCCACTTGTTCTCATCACACACACAAAATAAAAGTTACCCCTCAATTGCTTTTTGTTACCAGCCCATCTTAGATGTTTTTATCTGTTGTTTTATGTTTTGCAGGTAATAAATTAATATCATAATCTTGATTTTGGAGCAATATATATGGTTTGATAAAGCTTTCACATAAAGGATCGGAGACGTTATAATTTACTTACCAAGAGTTCATTTGGTTCGATCCTTTTCTTTGGTTCTTCATCAGTGCAACACGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACATTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGGTGCGTTAGTGTGCTGCTTATCTTTTTAAATATGACTGCTCTTGAAGCACGTATAGAACTATTTCTTTGCATTATATGTATGCCTAGCTCCTAACATTCTTTTATACCTTTTTAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCCGATCTGAAAGTTGCAGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAGAACGAATGCCCTCATATTGTTGTTGGAACACCCGGAAGGATATTGGCATTGACAAGAGACAAGGACCTTTCCCTGAAGAATGTGCGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAGTCACTTGGTATATTTTCTTTGAAAATCATTTGTCCTTCGAAGTATTATTAGATTCTCCACCATATATTATGTTCTTCGAAGTTTCATATTTGTTTTCCATTGGGTCCTTTTAGTTGTCTCATGGGCTATGTTTTAATATATGTATTATTTGGCATTGGCATATCTTCTTACTATGCCCTCTTCATGTACACTGCAGATATGCGGAGGGATGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCGGCGACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATGTAATGTCCCACAGCTAGTAAACCTTCAATTTAGAAGTTTTTTCCCTTTAAATTTCACTTTTTCTTAAGAGTTTTGCAAATTGTGGTGTCTACTGTTGGGTTTCCTACTTTCTTGTCGTTCAGGAGGGATCTCTTTTTTGTGTACTATCTTTTATCTTCCTTCACCTACAGCCTTTTCGGGAATTTACTGGTATATTGGAGGAGTATGTTGGTGATACAGTTTTAGAGGTTCTGAAGTAGTAGTTGGTGTTAAAGTCACTCACTTCTTCCCTTTTCCTCTCCCATTGTGTGTCACTTGTTATTCTCTTAGTGGGTTCTGGTTCTAACTTCCAACTGTGTGCTCTGGGGTATCCTATCAGATTTTTTTTGTACTAGTGTAATAGTCTGCATCTGCGGTATTTCTTGGTGACCATAGAAGTATCTGCAAAGGGGAGGCAGATCAGTTGGACCACAATCTTGGTTCATGGGATGAACATGCTCTTTCATTTCCTTCATCTTGAGGAAGTATTATGATTTACTGTGACGTTTGTTCCTTTCAGCCAATGGAAATATATGTCGATGACGAGGCAAAGTTGACATTGCATGGTCTTGTCCAGGTACACAGTTGTTAACATTGTGTTACTGTGGATAGATTGAGGTTTTTTTTTTTCCTTAAAGTTTGTTTTTGGAATGTCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGGAAGTTGAACGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGGGCAGCTGAGCTGGATAAGTTATTGGTGGAGTGTAATTTTCCATCTATATGTATCCATTCTGGCATGTCTCAGGAAGAGAGGTAGGTCTGATGTTGTATTACACATTCAAACTTTCCATACTCAATTGTGCCCAAGTGTATTCATTTTCCTTATTAATGTTGCTGCTTATGGGCATTCTAGACTTCGACCTTTTTTTGGTTAGTTATGGTATAGTGACTTCAGTGTCTTCCTTTCTCTAGATGTATAACTATTTTCCTGCATTAACGTTACTTGGTAGGAAGTTGCAAAATTGCCCATTTACTTTTAAAGGTGATTGATTTTTCTTGAGATCAATATAACTAATATGGAAAGATGATGTGCCAGGTTGACTCGATACAAGGGTTTCAAGGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGCGTAAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCACAGGGTAACGTGGATCATTCCTATGTATTTCGATTCTCATTATACCATCTACATTGGGCTTCCCAAGTGTGTATATTTAGTCTTCCTTAAAAAATCTTACAGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAACAATGTATGTAACTTTTAATTATACTTACTGTGACCATTAGATGGCATTTTCTTAGTCTTCGGCATTGCAGGTTCAAGAAAGGTTCGAAGTAGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATGTTCTCTTGTTTCCTCTTTTTTGTGTGATAATTTTCCTTTCTGAACTCCATTTTCTTTTGTAGTTTACCCTTCAGCCTGATTATCATTTATATTTCCCTTTTTACCATCTGTTTAAACTGAATTCTTACTAGCCGTTGTGGTAAATTTTTGCTCATTTAGTGATGGTTGAAAGAAACATGTTAATTTTGCTATCCGAGTTTTTAAGGATGTGGTGGAGGTGTATTTATTTATCCTCTGCTTATGAGTAGTAGTGCCAATATTTTACTTTGGTTGGTTGCAGTGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCTGGGTTGCCTTTGTGGTTCACATGTCATTGTGGTTCGAATCCAAATCGGACTCGAAATGGATGGAAGCCACTGGCACTAGGCTTGGGTGCGAGAGGGTAATGTGCTCTTGATGTGGTGGTGGTGGTGGTACACGCTGCTGCCATTTGAGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGGAAGTCTCTTTATGA

mRNA sequence

TCTCTTCGCTCTTCCTCCACACTGCGCTCTGCGATTCCTCGAGAGGCAGGTCTTAACACTTTTAGTTTTCCTTTGCAGACTTTGTGAAATCGCAACCCTAACTCTTAAGTTGAGTTCTTAGCAGGCTAACAGGAAGAAATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTATGAGGAAGAGGAAGAGAAGGCACCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCACAGTTCGGGATTCAGAGACTTCCTATTGAAGCCGGAGCTTCTCCGTGCTATTGTGGACTCGGGATTTGAGCATCCATCTGAAGTGCAACACGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACATTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCCGATCTGAAAGTTGCAGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAGAACGAATGCCCTCATATTGTTGTTGGAACACCCGGAAGGATATTGGCATTGACAAGAGACAAGGACCTTTCCCTGAAGAATGTGCGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAGTCACTTGATATGCGGAGGGATGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCGGCGACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTCGATGACGAGGCAAAGTTGACATTGCATGGTCTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGGAAGTTGAACGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGGGCAGCTGAGCTGGATAAGTTATTGGTGGAGTGTAATTTTCCATCTATATGTATCCATTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTCAAGGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGCGTAAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAACAATGTTCAAGAAAGGTTCGAAGTAGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATTGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCTGGGTTGCCTTTGTGGTTCACATGTCATTGTGGTTCGAATCCAAATCGGACTCGAAATGGATGGAAGCCACTGGCACTAGGCTTGGGTGCGAGAGGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGGAAGTCTCTTTATGA

Coding sequence (CDS)

ATGGGAGAAACAAGAGACAACGAATATGAGGAAGAGCTCCTCGACTATGAGGAAGAGGAAGAGAAGGCACCCGATTCCGTTGGAGCTAAAGTCAACGGTGAAGCTGGAAAGAAGGGTTATGTTGGAATTCACAGTTCGGGATTCAGAGACTTCCTATTGAAGCCGGAGCTTCTCCGTGCTATTGTGGACTCGGGATTTGAGCATCCATCTGAAGTGCAACACGAATGTATTCCCCAAGCTATCCTCGGCATGGATGTTATTTGTCAAGCTAAATCTGGTATGGGTAAAACTGCTGTTTTTGTTCTGTCAACATTGCAGCAGATTGACCCTGTTGCTGGTCAAGTTTCTGCCCTAGTTCTGTGCCATACTAGGGAGCTTGCATACCAGATCTGTCATGAGTTCGAAAGGTTCAGCACTTATCTTCCCGATCTGAAAGTTGCAGTCTTCTATGGTGGGGTGAATATTAAAATTCACAAAGATCTTCTGAAGAACGAATGCCCTCATATTGTTGTTGGAACACCCGGAAGGATATTGGCATTGACAAGAGACAAGGACCTTTCCCTGAAGAATGTGCGGCATTTTATCTTGGATGAATGTGACAAGATGCTTGAGTCACTTGATATGCGGAGGGATGTACAGGAAATCTTCAAGATGACTCCTCATGACAAACAAGTTATGATGTTTTCGGCGACACTCAGCAAAGAAATCCGCCCAGTTTGCAAGAAGTTTATGCAAGATCCAATGGAAATATATGTCGATGACGAGGCAAAGTTGACATTGCATGGTCTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGGAAGTTGAACGACCTCCTTGATGCATTGGACTTCAATCAAGTGGTTATTTTTGTTAAAAGTGTTAGTAGGGCAGCTGAGCTGGATAAGTTATTGGTGGAGTGTAATTTTCCATCTATATGTATCCATTCTGGCATGTCTCAGGAAGAGAGGTTGACTCGATACAAGGGTTTCAAGGAAGGACATAAGCGGATTCTTGTGGCAACAGATTTGGTTGGTCGAGGAATTGACATTGAACGCGTAAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCACAGGGTTGGCAGAGCTGGTAGATTTGGCACCAAAGGGCTTGCAATTACTTTTGTATCATCTGCAGCTGATTCTGATGTTCTCAACAATGTTCAAGAAAGGTTCGAAGTAGATATTAAGGAGCTTCCAGAGCAGATTGATACATCCACATACAGTATTGCCATCATAGATGTAGAGATCTTCAGCATAGAATATCAGCTACCTGGGTTGCCTTTGTGGTTCACATGTCATTGTGGTTCGAATCCAAATCGGACTCGAAATGGATGGAAGCCACTGGCACTAGGCTTGGGTGCGAGAGGTTTATTGTATTCTAATTGCTGGGGCTGTCTTGCATGGGAAGTCTCTTTATGA

Protein sequence

MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTYSIAIIDVEIFSIEYQLPGLPLWFTCHCGSNPNRTRNGWKPLALGLGARGLLYSNCWGCLAWEVSL

Homology

[Close]

BLAST of CmoCh12G002850 vs. ExPASy Swiss-Prot
Match: Q56XG6 (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 PE=1 SV=3)

HSP 1 Score: 795.0 bits (2052), Expect = 4.7e-229
Identity = 401/425 (94.35%), Postives = 412/425 (96.94%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTY 425
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmoCh12G002850 vs. ExPASy Swiss-Prot
Match: Q9LFN6 (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 PE=1 SV=2)

HSP 1 Score: 795.0 bits (2052), Expect = 4.7e-229
Identity = 401/425 (94.35%), Postives = 412/425 (96.94%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTY 425
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmoCh12G002850 vs. ExPASy Swiss-Prot
Match: Q5JK84 (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP2 PE=1 SV=1)

HSP 1 Score: 757.3 bits (1954), Expect = 1.1e-217
Identity = 383/425 (90.12%), Postives = 398/425 (93.65%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 62
           E +DNE YEE+L+DYEEE E   D   A  N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGADGGAAAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 302
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 303 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 362
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 363 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 422
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 423 DTSTY 425
           DTSTY
Sbjct: 425 DTSTY 429

[Close]

BLAST of CmoCh12G002850 vs. ExPASy Swiss-Prot
Match: Q0JM17 (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 GN=AIP1 PE=1 SV=2)

HSP 1 Score: 755.0 bits (1948), Expect = 5.3e-217
Identity = 382/425 (89.88%), Postives = 397/425 (93.41%), Query Frame = 0


Query: 3   ETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAG--KKGYVGIHSSGFRDFLLKPELLR 62
           E +DNE YEE+L+DYEEE E   D      N  A   KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 5   EVKDNEVYEEDLVDYEEEVENGTDGGANAANASADVVKKGYVGIHSSGFRDFLLKPELLR 64

Query: 63  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 122
           AI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQIDPVAGQV ALV
Sbjct: 65  AIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALV 124

Query: 123 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 182
           LCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CPHIVVGTPGRILA
Sbjct: 125 LCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILA 184

Query: 183 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 242
           L R+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 185 LAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 244

Query: 243 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 302
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSE EKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 245 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVS 304

Query: 303 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 362
           RAAEL+KLL ECNFP+I IHSGM+QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 305 RAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNI 364

Query: 363 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 422
           VINYDMPDSAD+YLHRVGRAGRFGTKGLAITFVSSA+DSDVLN VQERFEVDIKELPEQI
Sbjct: 365 VINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI 424

Query: 423 DTSTY 425
           DTSTY
Sbjct: 425 DTSTY 429

[Close]

BLAST of CmoCh12G002850 vs. ExPASy Swiss-Prot
Match: Q5WR10 (Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3 SV=1)

HSP 1 Score: 624.4 bits (1609), Expect = 1.1e-177
Identity = 309/421 (73.40%), Postives = 363/421 (86.22%), Query Frame = 0


Query: 6   DNEYEEELLDYEEEE-EKAPDSVGAKVNGEAGKKG-YVGIHSSGFRDFLLKPELLRAIVD 65
           +N+ + ELLDYEE+E E A    G++   +   KG YV IHSSGFRDFLLKPELLRAIVD
Sbjct: 3   ENDVDNELLDYEEDEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVD 62

Query: 66  SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHT 125
            GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ++PV GQVS LV+CHT
Sbjct: 63  CGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHT 122

Query: 126 RELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALTRD 185
           RELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CPHIVVGTPGRILAL R+
Sbjct: 123 RELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN 182

Query: 186 KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF 245
           K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF
Sbjct: 183 KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKF 242

Query: 246 MQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAE 305
           MQDPMEI+VDDE KLTLHGL Q+Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R   
Sbjct: 243 MQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIA 302

Query: 306 LDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINY 365
           L +LLVE NFP+I IH GM QEERL+RY+ FK+  +RILVAT+L GRG+DIERVNI  NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362

Query: 366 DMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTST 425
           DMP+ +DTYLHRV RAGRFGTKGLAITFVS   D+ +LN+VQ+RFEV+I ELP++ID S+
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISS 422

[Close]

BLAST of CmoCh12G002850 vs. ExPASy TrEMBL
Match: A0A6J1KNP7 (DEAD-box ATP-dependent RNA helicase 56 OS=Cucurbita maxima OX=3661 GN=LOC111496219 PE=4 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 8.5e-242
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTY 425
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmoCh12G002850 vs. ExPASy TrEMBL
Match: A0A6J1GHI6 (DEAD-box ATP-dependent RNA helicase 56-like OS=Cucurbita moschata OX=3662 GN=LOC111454236 PE=4 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 8.5e-242
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTY 425
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmoCh12G002850 vs. ExPASy TrEMBL
Match: A0A6J1HBG9 (DEAD-box ATP-dependent RNA helicase 56 OS=Cucurbita moschata OX=3662 GN=LOC111462573 PE=4 SV=1)

HSP 1 Score: 844.3 bits (2180), Expect = 2.5e-241
Identity = 423/424 (99.76%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTY 425
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmoCh12G002850 vs. ExPASy TrEMBL
Match: A0A1S3BC35 (DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.5e-241
Identity = 422/424 (99.53%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTY 425
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmoCh12G002850 vs. ExPASy TrEMBL
Match: A0A6J1BTR7 (DEAD-box ATP-dependent RNA helicase 56 OS=Momordica charantia OX=3673 GN=LOC111004723 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 5.5e-241
Identity = 422/424 (99.53%), Postives = 424/424 (100.00%), Query Frame = 0


Query: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60
           MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA
Sbjct: 1   MGETRDNEYEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLRA 60

Query: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120
           IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL
Sbjct: 61  IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVL 120

Query: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180
           CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL
Sbjct: 121 CHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILAL 180

Query: 181 TRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240
           +RDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC
Sbjct: 181 SRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC 240

Query: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 300
           KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSV+R
Sbjct: 241 KKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVNR 300

Query: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360
           AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 301 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 360

Query: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID
Sbjct: 361 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 420

Query: 421 TSTY 425
           TSTY
Sbjct: 421 TSTY 424

[Close]

BLAST of CmoCh12G002850 vs. TAIR 10
Match: AT5G11200.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 795.0 bits (2052), Expect = 3.3e-230
Identity = 401/425 (94.35%), Postives = 412/425 (96.94%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTY 425
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmoCh12G002850 vs. TAIR 10
Match: AT5G11170.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 795.0 bits (2052), Expect = 3.3e-230
Identity = 401/425 (94.35%), Postives = 412/425 (96.94%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300
           CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS
Sbjct: 241 CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVS 300

Query: 301 RAAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI 360
           RAAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNI
Sbjct: 301 RAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNI 360

Query: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQI 420
           VINYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQI
Sbjct: 361 VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 420

Query: 421 DTSTY 425
           DTSTY
Sbjct: 421 DTSTY 424

[Close]

BLAST of CmoCh12G002850 vs. TAIR 10
Match: AT5G11200.3 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 775.0 bits (2000), Expect = 3.5e-224
Identity = 401/466 (86.05%), Postives = 412/466 (88.41%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQ-----------------------------------------DPMEIYVDDEAKL 300
           CKKFMQ                                         DPMEIYVDDEAKL
Sbjct: 241 CKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKL 300

Query: 301 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICI 360
           TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICI
Sbjct: 301 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 360

Query: 361 HSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 420
           HSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR
Sbjct: 361 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 420

Query: 421 AGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTY 425
           AGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQIDTSTY
Sbjct: 421 AGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 465

[Close]

BLAST of CmoCh12G002850 vs. TAIR 10
Match: AT5G11200.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 768.1 bits (1982), Expect = 4.3e-222
Identity = 401/484 (82.85%), Postives = 412/484 (85.12%), Query Frame = 0


Query: 1   MGETRDNE-YEEELLDYEEEEEKAPDSVGAKVNGEAGKKGYVGIHSSGFRDFLLKPELLR 60
           MG+ RDNE YEEELLDYEEE+EK PDS G KVNGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1   MGDARDNEAYEEELLDYEEEDEKVPDS-GNKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALV 120
           AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALV
Sbjct: 61  AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALV 120

Query: 121 LCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180
           LCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121 LCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 180

Query: 181 LTRDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240
           L R+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181 LAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 241 CKKFMQD----------------------------------------------------- 300
           CKKFMQD                                                     
Sbjct: 241 CKKFMQDFLENETVSVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEK 300

Query: 301 ------PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 360
                 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR
Sbjct: 301 RWTRISPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 360

Query: 361 AAELDKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV 420
           AAEL+KLLVECNFPSICIHSGMSQEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIV
Sbjct: 361 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 420

Query: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQID 425
           INYDMPDSADTYLHRVGRAGRFGTKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQID
Sbjct: 421 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQID 480

[Close]

BLAST of CmoCh12G002850 vs. TAIR 10
Match: AT5G11170.2 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 654.1 bits (1686), Expect = 9.1e-188
Identity = 325/341 (95.31%), Postives = 334/341 (97.95%), Query Frame = 0


Query: 84  MDVICQAKSGMGKTAVFVLSTLQQIDPVAGQVSALVLCHTRELAYQICHEFERFSTYLPD 143
           MDVICQAKSGMGKTAVFVLSTLQQI+P  GQVSALVLCHTRELAYQIC+EF RFSTYLPD
Sbjct: 1   MDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPD 60

Query: 144 LKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILALTRDKDLSLKNVRHFILDECDKML 203
            KV+VFYGGVNIKIHKDLLKNECPHIVVGTPGR+LAL R+KDLSLKNVRHFILDECDKML
Sbjct: 61  TKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKML 120

Query: 204 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 263
           ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL
Sbjct: 121 ESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGL 180

Query: 264 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMS 323
           VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAEL+KLLVECNFPSICIHSGMS
Sbjct: 181 VQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMS 240

Query: 324 QEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
           QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG
Sbjct: 241 QEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 300

Query: 384 TKGLAITFVSSAADSDVLNNVQERFEVDIKELPEQIDTSTY 425
           TKGLAITFV+SA+DS+VLN VQERFEVDIKELPEQIDTSTY
Sbjct: 301 TKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTY 341

The following BLAST results are available for this feature:

BLAST of CmoCh12G002850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XG6	4.7e-229	94.35	DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana OX=3702 GN=RH15 P...	[more]
Q9LFN6	4.7e-229	94.35	DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana OX=3702 GN=RH56 P...	[more]
Q5JK84	1.1e-217	90.12	DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q0JM17	5.3e-217	89.88	DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5WR10	1.1e-177	73.40	Spliceosome RNA helicase DDX39B OS=Canis lupus familiaris OX=9615 GN=DDX39B PE=3...	[more]

BLAST of CmoCh12G002850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KNP7	8.5e-242	100.00	DEAD-box ATP-dependent RNA helicase 56 OS=Cucurbita maxima OX=3661 GN=LOC1114962...	[more]
A0A6J1GHI6	8.5e-242	100.00	DEAD-box ATP-dependent RNA helicase 56-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HBG9	2.5e-241	99.76	DEAD-box ATP-dependent RNA helicase 56 OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A1S3BC35	5.5e-241	99.53	DEAD-box ATP-dependent RNA helicase 56 OS=Cucumis melo OX=3656 GN=LOC103488306 P...	[more]
A0A6J1BTR7	5.5e-241	99.53	DEAD-box ATP-dependent RNA helicase 56 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of CmoCh12G002850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11200.1	3.3e-230	94.35	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11170.1	3.3e-230	94.35	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.3	3.5e-224	86.05	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11200.2	4.3e-222	82.85	DEAD/DEAH box RNA helicase family protein	[more]
AT5G11170.2	9.1e-188	95.31	DEAD/DEAH box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 302..383 e-value: 1.3E-30 score: 117.7
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 276..383 e-value: 2.6E-27 score: 95.4
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 278..423 score: 22.658665
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 65..266 e-value: 1.7E-53 score: 193.7
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 77..250 score: 25.957226
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 71..236 e-value: 5.7E-38 score: 130.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 259..427 e-value: 1.9E-53 score: 182.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 42..258 e-value: 1.0E-73 score: 249.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 115..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR47958:SF15	DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE	coord: 28..422
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 28..422
None	No IPR available	CDD	cd18787	SF2_C_DEAD	coord: 263..392 e-value: 1.02398E-56 score: 182.707
None	No IPR available	CDD	cd17950	DEADc_DDX39	coord: 45..252 e-value: 5.65942E-165 score: 462.585
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 46..74 score: 9.66548

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G002850.1	CmoCh12G002850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003676	nucleic acid binding