Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCCATAAGCTTAGAAGAGCTTCACCTCTACCACGCCATTGATAGAGAGCTCTTCTCCCGTTTGATGATCAACCTCTCACGAGATCCCGCCCAGTCTCTTCTAATCATTTCCCTTTGGCTATGGCTCGAAGAACAGGGCTTCACCAATTTCATTTTCAAAATCATCCCTTTCCCCGACCACTTCATCAATTCCTTAGCTAATGAAGCTCTTTTCTGTCTCAACTCACTCGTTTTCGATTCCCGACACGGCGGTGGGCCCCACCCTACTCTCCTTCCGCCTGTCTTTCCGGCCACCTCCTTGGTGGCCGGAACAGAAATCTCAGTTGTGTTGTTCATACGAAACCGGTTCAGAGCAATCAGTGGAGTTAAGTACTTTCTCACCAATGTCTGTTCTCGGGTTTTTACTGACATTTTGGAGACTGTGTTGGGAAGAACCGATTCTCAATCGGATGCGGCTTTAGTGATTAATGGGTTTCCACATCCGGTTTTTGGTTCGATCACAATTGTCCCTAAATGTTTGAACCATACTTTTCCGACCGGTCGGTTATGGGAGTGGCGAATGTCGGACGGCGGCATAGTGGAAGACGACCGGACTCTGTTTCTGACATTTTCGCGGGGGTTTCCGGTGTCGGCGGAGGAAATAAAGGGGCTTTTTACAGAGGCGTTTGGGGAGTGCGTTGTGGGTATTCAGATGGAGTTGGTTCCGGTCGGCGAGCAGCCGCTGTACGCTCGAGTGGTGATGAGTTCGGTGGTGGCGGTGGATCGGATCCTCGACGGGAAGCGAATTGCTAAGTTTCGTACTAATGGTAAGCATATTTGGGCTCGGAAATATGAACGGAGATCGGAATTATTGACCGGAAAGTGA
mRNA sequence
ATGGCCTCCATAAGCTTAGAAGAGCTTCACCTCTACCACGCCATTGATAGAGAGCTCTTCTCCCGTTTGATGATCAACCTCTCACGAGATCCCGCCCAGTCTCTTCTAATCATTTCCCTTTGGCTATGGCTCGAAGAACAGGGCTTCACCAATTTCATTTTCAAAATCATCCCTTTCCCCGACCACTTCATCAATTCCTTAGCTAATGAAGCTCTTTTCTGTCTCAACTCACTCGTTTTCGATTCCCGACACGGCGGTGGGCCCCACCCTACTCTCCTTCCGCCTGTCTTTCCGGCCACCTCCTTGGTGGCCGGAACAGAAATCTCAGTTGTGTTGTTCATACGAAACCGGTTCAGAGCAATCAGTGGAGTTAAGTACTTTCTCACCAATGTCTGTTCTCGGGTTTTTACTGACATTTTGGAGACTGTGTTGGGAAGAACCGATTCTCAATCGGATGCGGCTTTAGTGATTAATGGGTTTCCACATCCGGTTTTTGGTTCGATCACAATTGTCCCTAAATGTTTGAACCATACTTTTCCGACCGGTCGGTTATGGGAGTGGCGAATGTCGGACGGCGGCATAGTGGAAGACGACCGGACTCTGTTTCTGACATTTTCGCGGGGGTTTCCGGTGTCGGCGGAGGAAATAAAGGGGCTTTTTACAGAGGCGTTTGGGGAGTGCGTTGTGGGTATTCAGATGGAGTTGGTTCCGGTCGGCGAGCAGCCGCTGTACGCTCGAGTGGTGATGAGTTCGGTGGTGGCGGTGGATCGGATCCTCGACGGGAAGCGAATTGCTAAGTTTCGTACTAATGGTAAGCATATTTGGGCTCGGAAATATGAACGGAGATCGGAATTATTGACCGGAAAGTGA
Coding sequence (CDS)
ATGGCCTCCATAAGCTTAGAAGAGCTTCACCTCTACCACGCCATTGATAGAGAGCTCTTCTCCCGTTTGATGATCAACCTCTCACGAGATCCCGCCCAGTCTCTTCTAATCATTTCCCTTTGGCTATGGCTCGAAGAACAGGGCTTCACCAATTTCATTTTCAAAATCATCCCTTTCCCCGACCACTTCATCAATTCCTTAGCTAATGAAGCTCTTTTCTGTCTCAACTCACTCGTTTTCGATTCCCGACACGGCGGTGGGCCCCACCCTACTCTCCTTCCGCCTGTCTTTCCGGCCACCTCCTTGGTGGCCGGAACAGAAATCTCAGTTGTGTTGTTCATACGAAACCGGTTCAGAGCAATCAGTGGAGTTAAGTACTTTCTCACCAATGTCTGTTCTCGGGTTTTTACTGACATTTTGGAGACTGTGTTGGGAAGAACCGATTCTCAATCGGATGCGGCTTTAGTGATTAATGGGTTTCCACATCCGGTTTTTGGTTCGATCACAATTGTCCCTAAATGTTTGAACCATACTTTTCCGACCGGTCGGTTATGGGAGTGGCGAATGTCGGACGGCGGCATAGTGGAAGACGACCGGACTCTGTTTCTGACATTTTCGCGGGGGTTTCCGGTGTCGGCGGAGGAAATAAAGGGGCTTTTTACAGAGGCGTTTGGGGAGTGCGTTGTGGGTATTCAGATGGAGTTGGTTCCGGTCGGCGAGCAGCCGCTGTACGCTCGAGTGGTGATGAGTTCGGTGGTGGCGGTGGATCGGATCCTCGACGGGAAGCGAATTGCTAAGTTTCGTACTAATGGTAAGCATATTTGGGCTCGGAAATATGAACGGAGATCGGAATTATTGACCGGAAAGTGA
Protein sequence
MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFPDHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRAISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFPTGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGEQPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK
Homology
BLAST of CmoCh12G002840 vs. ExPASy TrEMBL
Match:
A0A6J1GHL8 (uncharacterized protein LOC111454239 OS=Cucurbita moschata OX=3662 GN=LOC111454239 PE=4 SV=1)
HSP 1 Score: 584.7 bits (1506), Expect = 2.1e-163
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP
Sbjct: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120
DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA
Sbjct: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120
Query: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFP 180
ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFP
Sbjct: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFP 180
Query: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE 240
TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE
Sbjct: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE 240
Query: 241 QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK 290
QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK
Sbjct: 241 QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK 289
BLAST of CmoCh12G002840 vs. ExPASy TrEMBL
Match:
A0A6J1KUV7 (uncharacterized protein LOC111496620 OS=Cucurbita maxima OX=3661 GN=LOC111496620 PE=4 SV=1)
HSP 1 Score: 564.3 bits (1453), Expect = 2.9e-157
Identity = 277/289 (95.85%), Postives = 284/289 (98.27%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
MASISLEELHLYHAIDRELFSRL+INLS DPAQSLLIISLWLWLEEQGFTNFIFKIIPFP
Sbjct: 1 MASISLEELHLYHAIDRELFSRLLINLSLDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120
DHFINSLANEALFCLNSL FDSRHGGGP PTLLPPVFPATSLVAGTEIS+VLFIRNRFRA
Sbjct: 61 DHFINSLANEALFCLNSLDFDSRHGGGPRPTLLPPVFPATSLVAGTEISIVLFIRNRFRA 120
Query: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFP 180
ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSI IVPKCL+HTFP
Sbjct: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSIRIVPKCLDHTFP 180
Query: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE 240
TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPV+ EEIKG+FTEAFG+CVVGIQMELVPVGE
Sbjct: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVTTEEIKGVFTEAFGDCVVGIQMELVPVGE 240
Query: 241 QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK 290
QPLYAR+VMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK
Sbjct: 241 QPLYARMVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELLTGK 289
BLAST of CmoCh12G002840 vs. ExPASy TrEMBL
Match:
A0A5A7VHI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002470 PE=4 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 3.0e-117
Identity = 214/286 (74.83%), Postives = 243/286 (84.97%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
M SISLEELHLYH+IDRE+FSRL+I LSRDPAQSLLIISLWLWLEEQGFTNFIF+I+P
Sbjct: 1 MTSISLEELHLYHSIDREIFSRLLIKLSRDPAQSLLIISLWLWLEEQGFTNFIFRIMPLS 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120
D +NSLANEA+FCL S + + H G PHPT+L PATS G EI V +F++NRFRA
Sbjct: 61 DPSLNSLANEAVFCL-SCLDSTNHPGLPHPTVL----PATSKAGGREIPVEMFVQNRFRA 120
Query: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFP 180
ISGVKYFLTNVC+R+FTDILE VLGR +SQS+ ALVI+GFPHP+FGSITI+PK L+ FP
Sbjct: 121 ISGVKYFLTNVCARIFTDILEIVLGRNNSQSNEALVIHGFPHPIFGSITIIPKSLDQDFP 180
Query: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE 240
TG LW W +D G+ EDDRTLFLTFSRGFPV+AEE+KGLF +AFG+CV IQME V GE
Sbjct: 181 TGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGE 240
Query: 241 QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELL 287
QPLYAR+VMSSVV VD+ILDGKRIAKFR NGKHIWARKYERRSELL
Sbjct: 241 QPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELL 281
BLAST of CmoCh12G002840 vs. ExPASy TrEMBL
Match:
A0A1S3BCV6 (uncharacterized protein LOC103488307 OS=Cucumis melo OX=3656 GN=LOC103488307 PE=4 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 3.0e-117
Identity = 214/286 (74.83%), Postives = 243/286 (84.97%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
M SISLEELHLYH+IDRE+FSRL+I LSRDPAQSLLIISLWLWLEEQGFTNFIF+I+P
Sbjct: 1 MTSISLEELHLYHSIDREIFSRLLIKLSRDPAQSLLIISLWLWLEEQGFTNFIFRIMPLS 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120
D +NSLANEA+FCL S + + H G PHPT+L PATS G EI V +F++NRFRA
Sbjct: 61 DPSLNSLANEAVFCL-SCLDSTNHPGLPHPTVL----PATSKAGGREIPVEMFVQNRFRA 120
Query: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFP 180
ISGVKYFLTNVC+R+FTDILE VLGR +SQS+ ALVI+GFPHP+FGSITI+PK L+ FP
Sbjct: 121 ISGVKYFLTNVCARIFTDILEIVLGRNNSQSNEALVIHGFPHPIFGSITIIPKSLDQDFP 180
Query: 181 TGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGE 240
TG LW W +D G+ EDDRTLFLTFSRGFPV+AEE+KGLF +AFG+CV IQME V GE
Sbjct: 181 TGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAGE 240
Query: 241 QPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELL 287
QPLYAR+VMSSVV VD+ILDGKRIAKFR NGKHIWARKYERRSELL
Sbjct: 241 QPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELL 281
BLAST of CmoCh12G002840 vs. ExPASy TrEMBL
Match:
A0A0A0LLY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381710 PE=4 SV=1)
HSP 1 Score: 424.1 bits (1089), Expect = 4.7e-115
Identity = 213/287 (74.22%), Postives = 242/287 (84.32%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
M SISLEELHLYH+IDRE+FSRL+I LSRDPAQSLLIISLWLWLEEQG TNFIF+I+P
Sbjct: 1 MPSISLEELHLYHSIDREIFSRLLIQLSRDPAQSLLIISLWLWLEEQGVTNFIFRIMPLS 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGG-PHPTLLPPVFPATSLVAGTEISVVLFIRNRFR 120
D +NSLANEA+FCL+ L DS + G PHPT V PATS AG +I V +F++NRFR
Sbjct: 61 DPSLNSLANEAVFCLSCL--DSNNQPGCPHPT---TVLPATSKAAGRDIPVEMFVQNRFR 120
Query: 121 AISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTF 180
AISGVKYFLTNVC+R+FTDILE VLGR +SQ + ALVI+GFPHP+FGSITI+PK L+ F
Sbjct: 121 AISGVKYFLTNVCARIFTDILEIVLGRNNSQPNEALVIHGFPHPIFGSITIIPKSLDQDF 180
Query: 181 PTGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQMELVPVG 240
PTG LW W +D G+ EDDRTLFLTFSRGFPV+AEE+KGLF +AFG+CV IQME V G
Sbjct: 181 PTGGLWGWPSADAGMSEDDRTLFLTFSRGFPVTAEEVKGLFVQAFGDCVESIQMEEVEAG 240
Query: 241 EQPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHIWARKYERRSELL 287
EQPLYAR+VMSSVV VD+ILDGKRIAKFR NGKHIWARKYERRSELL
Sbjct: 241 EQPLYARMVMSSVVPVDQILDGKRIAKFRINGKHIWARKYERRSELL 282
BLAST of CmoCh12G002840 vs. TAIR 10
Match:
AT1G64870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 213.0 bits (541), Expect = 3.2e-55
Identity = 125/310 (40.32%), Postives = 176/310 (56.77%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
M+ ++E+LH +HA +RE+FS+L+ L R PA+SLL+++ WLW E+ GF N I F
Sbjct: 1 MSHPTVEQLHAFHAQEREIFSKLVQKLRRPPAESLLVMATWLWFEDFGFGNIFSIITVFS 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRA 120
D I LANEA+ C L D P P T +IS+ + +R+ A
Sbjct: 61 DLLIVDLANEAVLCFRCLESD-------QPPNDVSQIPLTERFMKNDISLQIIHNHRYTA 120
Query: 121 ISGVKYFLTNVCSRVFTDILETVLGRTDSQSDA----ALVINGFPHPVFGSITIVPKCL- 180
I+G+K FLT +CSR+F+DIL+ VL + S L+I GFPHP FGSI ++P +
Sbjct: 121 ITGIKNFLTTICSRIFSDILQRVLPSSSSSFITNLRHPLIIPGFPHPTFGSINVLPNIVA 180
Query: 181 --------NHTFPTGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEAFGE- 240
+ FP G LW W ++ + +RT+FLTFSRGFPVS E+ LFTE +GE
Sbjct: 181 RDNLPNANSFLFPHG-LWGWN-ANHVATDKERTVFLTFSRGFPVSHAEVIHLFTEIYGED 240
Query: 241 CVVGIQM------------ELVPVGEQPLYARVVMSSVVAVDRILDGKRIAKFRTNGKHI 285
CV + M +QPL+A++V+ SVV VDRIL G+ K++ NGKHI
Sbjct: 241 CVESVYMPEDGGNSSNDNTNCNGHQQQPLFAKMVLDSVVTVDRILSGQEKQKYKINGKHI 300
BLAST of CmoCh12G002840 vs. TAIR 10
Match:
AT3G45200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 95 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 212.2 bits (539), Expect = 5.4e-55
Identity = 126/311 (40.51%), Postives = 180/311 (57.88%), Query Frame = 0
Query: 1 MASISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFTNFIFKIIPFP 60
M+ ++ +ELH++HA DRE+FS+L++ SR PA+SLL+++ WLWLE+ GF N I+
Sbjct: 1 MSLLNAQELHVFHAQDREIFSKLVLKFSRPPAESLLVMATWLWLEDFGFENIFSIILTLT 60
Query: 61 DHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPV--FPATSLVAGTEISVVLFIRNRF 120
D I LA EA+ C L ++ PP+ P T+ IS+ + +NR+
Sbjct: 61 DPLIAGLAYEAVSCFQCLSLNN-----------PPIGRIPLTTKYLKKNISLQMIYKNRY 120
Query: 121 RAISGVKYFLTNVCSRVFTDILETVL-----GRTDSQSDAALVINGFPHPVFGSITIVP- 180
AI+G+K FLT VC+R+FTDIL VL D++ L I GFPHP+FGSI ++P
Sbjct: 121 SAITGIKNFLTTVCTRIFTDILLRVLPPSSMSSFDARLRQPLQIPGFPHPIFGSINVMPN 180
Query: 181 ---------KCLNHTFPTGRLWEWRMSDGGIVEDDRTLFLTFSRGFPVSAEEIKGLFTEA 240
K N F LW W ++ E+DRTLFLTFSRG+PV+ EI LFT+
Sbjct: 181 EVDRDNFSNKNNNLFFIPNGLWGWN-ANCIATENDRTLFLTFSRGYPVTHAEIIELFTKE 240
Query: 241 FGE-CVVGIQME-----------LVPVGEQPLYARVVMSSVVAVDRILDGKRIAKFRTNG 283
+GE CV G+ M+ +Q L+AR+V+ SV VDR+LD ++ + G
Sbjct: 241 YGENCVEGVYMQHDNKRSFNANANRSCEQQSLFARLVLDSVTTVDRVLDDEQKKELMIYG 299
BLAST of CmoCh12G002840 vs. TAIR 10
Match:
AT5G11220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 177.6 bits (449), Expect = 1.5e-44
Identity = 106/267 (39.70%), Postives = 155/267 (58.05%), Query Frame = 0
Query: 38 ISLWLWLEEQGFTNFIFKIIPFPDHFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVF 97
++ W WLE+ N + I+ D I +LANEA+ C L DS +
Sbjct: 1 MATWFWLEDFFSQNILSTILALSDPVIMALANEAVLCFQCL--DSAEQPNDFNQI----- 60
Query: 98 PATSLVAGTEISVVLFIRNRFRAISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAA--- 157
P T+ + +IS+ +F ++R+ AI+G++ FLT VCSR+F+DIL+ L + S
Sbjct: 61 PLTAELLAKDISLQIFHKHRYSAIAGIRNFLTTVCSRIFSDILQRALPPSSSYPFVTRLR 120
Query: 158 --LVINGFPHPVFGSITIVPKCL-------NHTFPTGR-LWEWRMSDGGIVEDDRTLFLT 217
L+I GFPHP FGSI ++ + N+ FP LW W S +++RT+F+T
Sbjct: 121 HPLIIPGFPHPTFGSINVMHDVVVGDNLYNNNLFPCSHGLWGWNASCIA-TDNERTMFIT 180
Query: 218 FSRGFPVSAEEIKGLFTEAFGE-CVVGIQME------LVPVG-----EQPLYARVVMSSV 277
FSRGFPVS E+K FT+ +GE CV G+ M+ L G +Q L+A++V++SV
Sbjct: 181 FSRGFPVSQAEVKRFFTKNYGENCVEGVYMKEDNKNFLNANGNDNGQQQSLFAKLVLNSV 240
Query: 278 VAVDRILDGKRIAKFRTNGKHIWARKY 280
VDRILDG++I +F++NGKHIWARKY
Sbjct: 241 ATVDRILDGEKIKRFKSNGKHIWARKY 259
BLAST of CmoCh12G002840 vs. TAIR 10
Match:
AT1G49290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 142.1 bits (357), Expect = 6.9e-34
Identity = 98/319 (30.72%), Postives = 155/319 (48.59%), Query Frame = 0
Query: 4 ISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGFT-NFIFKIIPFPDH 63
++ +E + +H IDR LFSRL+ NL+RD QS L + L+LE+ + + I ++ P+
Sbjct: 19 VTRDEFNAFHTIDRTLFSRLVFNLNRDVDQSFLAMCFLLFLEQSSYARDIIAYLVSLPNA 78
Query: 64 FINSLANEALFCLNSLV---FDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFR 123
F++++ANE C+N L F S + + P + G + ++ L + R
Sbjct: 79 FVDAVANEIGVCINLLYNVEFASTFFAADNDD--NSMIPLLLRITGGKFTLRLINQQRKN 138
Query: 124 AISGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGF------------------- 183
+GV T+VC+R F+D+ ET R + + AL F
Sbjct: 139 FCAGVTKSWTDVCTRAFSDLCETA-HRINREKQLALEREKFIEDMKKLRLSLQQEKSNRL 198
Query: 184 --------------PHPVFGSITIVPKCLNHTFPTGRLWEWRMSDGGIVEDDRTLFLTFS 243
PHP T K L E + +G + DDRT+FLTFS
Sbjct: 199 SVQQVKIASPPPPRPHPPVEDET--EKALREK----ETMEVKEKEGVLAADDRTVFLTFS 258
Query: 244 RGFPVSAEEIKGLFTEAFGECVVGIQMELVPVGEQPLYARVVMSSVVA--VDRILDGKRI 284
+G+P+S E++ FT FGE + ++M+ V EQPL+A++VM A +D I+ +
Sbjct: 259 KGYPISEAEVRVYFTRRFGEVIEAVEMQEVEANEQPLFAKMVMKLQCASMMDEIVSARFR 318
BLAST of CmoCh12G002840 vs. TAIR 10
Match:
AT5G13620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 140.6 bits (353), Expect = 2.0e-33
Identity = 95/292 (32.53%), Postives = 149/292 (51.03%), Query Frame = 0
Query: 3 SISLEELHLYHAIDRELFSRLMINLSRDPAQSLLIISLWLWLEEQGF-TNFIFKIIPFPD 62
+++ +E + +H DR LF R ++ L RD QSL ++S L+LE+ G +N I PD
Sbjct: 9 AVTRDEFNAFHKCDRALFRRFVVRLRRDINQSLQVMSFLLYLEKSGLVSNLIVNFNSLPD 68
Query: 63 HFINSLANEALFCLNSLVFDSRHGGGPHPTLLPPVFPATSLVAGTEISVVLFIRNRFRAI 122
FIN++A+E + CL+ L +++ + + P + + G +++ + +NR +
Sbjct: 69 FFINTVADEVVMCLSCLSYENFSMFVAN--FGKKIIPLITRMTGEYLTLAVIHQNRESIL 128
Query: 123 SGVKYFLTNVCSRVFTDILETVLGRTDSQSDAALVINGFPHPVFGSITIVPKCLNHTFPT 182
+K LT++C F DI Q++ VI H F S + + F +
Sbjct: 129 LDMKKHLTSICYPAFEDIC--------VQAEKEKVIEDMKHLGF-SKAVHKAGSSSQFLS 188
Query: 183 GRLWEWRMSDGGIV-------EDDRTLFLTFSRGFPVSAEEIKGLFTEAFGECVVGIQME 242
+ R S G+ EDDRT+FLTFSRG+P+S E+ FT FGE + I M
Sbjct: 189 EQQATTRTSKVGVFSEDEQAREDDRTVFLTFSRGYPLSEAEVHAYFTRRFGEIIEAIIMP 248
Query: 243 LVPVGEQPLYARVVMSSVVAVDRIL-DGKRIAKFRTNGKHIWARKYERRSEL 286
EQ LYA++V+ S + I+ DG K+ NGKH+WARKY RS +
Sbjct: 249 GGEGNEQALYAKMVLHSAAMIPEIVSDGIERNKYTINGKHVWARKYIPRSSI 289
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1GHL8 | 2.1e-163 | 100.00 | uncharacterized protein LOC111454239 OS=Cucurbita moschata OX=3662 GN=LOC1114542... | [more] |
A0A6J1KUV7 | 2.9e-157 | 95.85 | uncharacterized protein LOC111496620 OS=Cucurbita maxima OX=3661 GN=LOC111496620... | [more] |
A0A5A7VHI7 | 3.0e-117 | 74.83 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BCV6 | 3.0e-117 | 74.83 | uncharacterized protein LOC103488307 OS=Cucumis melo OX=3656 GN=LOC103488307 PE=... | [more] |
A0A0A0LLY9 | 4.7e-115 | 74.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G381710 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G64870.1 | 3.2e-55 | 40.32 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G45200.1 | 5.4e-55 | 40.51 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT5G11220.1 | 1.5e-44 | 39.70 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
AT1G49290.1 | 6.9e-34 | 30.72 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT5G13620.1 | 2.0e-33 | 32.53 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |