CmoCh12G002240 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATATCTCCCCAACACGCCCTCTCTCTCTCCCCTTTTCTCTCTCCTCCTCTCTCTCCGCCGTATGAAGCATAAATTCTCTCTTTCCGCCGCCTTCAGCCGCCAAATCCTGATCCTCCTCCTCTTTCGACGACAAAACTATGAAGCGCAGCGCCTCCGAGTTGGCTCTTGAAGAGCTCCTCGAAACGACAGCCATCGCCTCTCCAGAAGTCATCGACGCCGAGGCTGACGACGAGTTACAAAACGACAACGTTTTCAAAACCGAACACGAAGTCATCTCCCGGAGCCCTAAAAGAAGCAAGAACTTCCAGGACTCCGCCGATGCGTGCAGCTTCTTCGGCGATATCGATTTCAATTTCTTCTTGAGAAATAATCGGGTTCGTAATCGCCGATCTTTCTGTAAATCGCTCGAAATTAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATAAAATAATTAGAATATTTTATTTGGTTTATTAACTTTAAATATTCACGTAAGGGTTATGTTAAATGCATGAAAATATAATATATTTTAAAATATAAAATGATTTTTTTAAAAATTTTATTTAATTTCAGGCAGCTTTTTGTTGTTGTTATTTTTTATAATTAAAATAAATAAATAATTGAAAGTGCAGGAGATAATGGACGCGATTGCTAACTGTGGAGGTGGGGTGGCGGAGGGTCCTTTATGGGCACAGAATCTCACACCTAAGCTCTCGACCATTTCAGCCACTATAGATTCCCAGTCTTCTATTGGTAACTCCATTATTATTTATTTATTTATTTATTTATTTTAAGATTTAAAATTAATTAAAAAAATATAATAACTAAATATGTATTTTTTTTCTTCTTCATCTTTTTATGAAATTACTTTGAGACTCGAAAGTGACGTAATTTTGTATAGGTAAGTTAGAAATCTGCTCGGTCCCGAGATCCATACAGCTTAGGGTTTAGGGTCGTTCTACTTATTTTTATGAGAGTTAGAATGATACTTTCCACGGTAAATTTATAAGGATCGAAATTCTCAGTAATTTTTTTTTTTAATTTTCAACCATGATATTTTTTAAAAATGGTAATTTTCAATATAATTATTTAAAGATAAGGTATTTTCATAATAAAAAAAATAATATTTTATGAGTAAGAATAAAATTATATTCCACCGCATATAATTTTTTAATATTACCAACGTTATATCTAAAAATTTAAATTTCAATATTACAATATAGTCTTCAACAAGATATAATAATAGCAATAATAAGCGGAGAGGAGGAGAGGAGGCTCTGGGCCGGGATGAGGACTAGATATATTACTTTTAAAATAAAAAATGAAAAAATAAAAAATAAATATTTTTTAAAATTTTAATAATAATTAACTTTTTAAAGACTGAATTTTAGAGGTTTAATATATAAATTAAAATGAAATGGAGTGGAAAATATAAAAACTAAAATTATATTTTTGATTGAGTAAAATAATTATTATGGTTAATAAATTATAATTTTAATTAATTAGATTTGGATTAATATAAAAATATTATTAATAATTGAAATAATAAATAAAAAAAAAGGTAAGGAAAAAGAATGATTCCAAAATGGTTGGTGTGGACAGTGAGCAGCCCAACATCAGCTAGCAATTTGATGGGCAGAGAGCACCAAAGAGGCGCCAACAGCGGGTCCTCCGAGGATCAATCGGACGATGAGATTGAGGCTGGGTCTTGTGAGCAAAGCAATGACCCTCTTACTTTGAAGAAGATCAGAAGGTGCTTTTACTTTACTTGCTTTATTTTGCATTTCATCTTCTAATCTTGGTCTTCCACTTGTAGAATGATCTCTAATAGGGACTCGGCTAGACGGTCGAGACGACGAAAACAAGCTCATTTGGCTGAACTCGAGAGTCAGGTATGTTGACAATATCTCTGTTGGTGGGTGTATATTTAATAAGAAATTCGAGTTGGGTTTGGTTCGATCTAATCTAGTTTTAGAGGAATTGTGAGATCACACGTTGGTTGGAGAGGGGAACGAAACGTACCCTATAAGGTGGAAACCTCTCCCTAGTAGACGCGTTTTAACTATGAGGTTGACGATGATATGTAACGGGTCAAAGCGGACAATACCTATTAGCGGTGGGTTTCGGCTAACTATTACGAATGATATCAAAGTCAGTCACCGAGTGGTGTGTCAGCGAGAATGCTAGCCCTCAAGGGAGTGGATTGTGAGATCTCACATCGGTTGGAGGGGGAAACGAAACATTCCTTAGAAGGGTGTGGAAATCTCTCCTTAACAGATGAGTTTTAAAACGAGTCAAAGCGAACAATATTTGTTAGCAGTGGGTTTCCGCTGTTACAGGAATCCATGTATGGGTTGGGGTGATCGAGTTTTGTGGATCATTGGGTTTTTTTTTAACATTAAGCACCAACCAACCTCTAAGAACTCGGTGATACCACTAACATTCATTGTTTTGATTTTCTCAGGTGAAACAACTTAAAGTAGAAAACGAAACGTTGTTCAACCAGCTTTTAGATGCAAGTCAGCAATACCGTGATGCCAATACAAACAACCGAGTGCTTAAATCAGACGTGGATGCGATGAGAGCCAAGGTACTAAATTCTCTTACTCTCCATACACAAACGAATTTGAAGAGAGCTCGAGAAAACAAAATCGATCATATCACGTAAACTTTTTCCTTTTTCGATCGAAGGTAAAGTTAGCTGAAGATACACTCGCTAGAGGCTCAATGACCAGTAGCTTGAACCAGCTCCTACAGAATCATTTGAGCACGCCGCAGCCACTAACCGTGCTGCGGCGGATGTCGAATATCCCATTGCCACTCGGTCTTCCCGGAGACGACGTTTCTTATTCTGGCGTGACAATGTCGAGCCAGAACCCAGCCACCCGGCTCGCAGAAACTGGAATGGCTAGTGAGGCTGTTAGCTGTGTGTCTGAGATTTGGCCTAGAAATTAGCCCTTTTATCATGTCATATGTTTGGCTTGTATGATAGAATTCAGACTCTCTGTTTGCTGTGTCGTTGATTTTAGACTGCTCATTTGCTTGTGTTTGGGTCAGTATGAATAGCTATTGATATCAACTGTGGAGCATAGAATAGCTACAATGATATCAACTGTGGAGCATAGAATAGCTATTGATATCAACCGTGTAGCTATATTGATATCAACTGTGGAGCATAGA ATATATCTCCCCAACACGCCCTCTCTCTCTCCCCTTTTCTCTCTCCTCCTCTCTCTCCGCCGTATGAAGCATAAATTCTCTCTTTCCGCCGCCTTCAGCCGCCAAATCCTGATCCTCCTCCTCTTTCGACGACAAAACTATGAAGCGCAGCGCCTCCGAGTTGGCTCTTGAAGAGCTCCTCGAAACGACAGCCATCGCCTCTCCAGAAGTCATCGACGCCGAGGCTGACGACGAGTTACAAAACGACAACGTTTTCAAAACCGAACACGAAGTCATCTCCCGGAGCCCTAAAAGAAGCAAGAACTTCCAGGACTCCGCCGATGCGTGCAGCTTCTTCGGCGATATCGATTTCAATTTCTTCTTGAGAAATAATCGGGAGATAATGGACGCGATTGCTAACTGTGGAGGTGGGGTGGCGGAGGGTCCTTTATGGGCACAGAATCTCACACCTAAGCTCTCGACCATTTCAGCCACTATAGATTCCCAGTCTTCTATTGTGAGCAGCCCAACATCAGCTAGCAATTTGATGGGCAGAGAGCACCAAAGAGGCGCCAACAGCGGGTCCTCCGAGGATCAATCGGACGATGAGATTGAGGCTGGGTCTTGTGAGCAAAGCAATGACCCTCTTACTTTGAAGAAGATCAGAAGAATGATCTCTAATAGGGACTCGGCTAGACGGTCGAGACGACGAAAACAAGCTCATTTGGCTGAACTCGAGAGTCAGGTGAAACAACTTAAAGTAGAAAACGAAACGTTGTTCAACCAGCTTTTAGATGCAAGTCAGCAATACCGTGATGCCAATACAAACAACCGAGTGCTTAAATCAGACGTGGATGCGATGAGAGCCAAGGTAAAGTTAGCTGAAGATACACTCGCTAGAGGCTCAATGACCAGTAGCTTGAACCAGCTCCTACAGAATCATTTGAGCACGCCGCAGCCACTAACCGTGCTGCGGCGGATGTCGAATATCCCATTGCCACTCGGTCTTCCCGGAGACGACGTTTCTTATTCTGGCGTGACAATGTCGAGCCAGAACCCAGCCACCCGGCTCGCAGAAACTGGAATGGCTAGTGAGGCTGTTAGCTGTGTGTCTGAGATTTGGCCTAGAAATTAGCCCTTTTATCATGTCATATGTTTGGCTTGTATGATAGAATTCAGACTCTCTGTTTGCTGTGTCGTTGATTTTAGACTGCTCATTTGCTTGTGTTTGGGTCAGTATGAATAGCTATTGATATCAACTGTGGAGCATAGAATAGCTACAATGATATCAACTGTGGAGCATAGAATAGCTATTGATATCAACCGTGTAGCTATATTGATATCAACTGTGGAGCATAGA ATGAAGCGCAGCGCCTCCGAGTTGGCTCTTGAAGAGCTCCTCGAAACGACAGCCATCGCCTCTCCAGAAGTCATCGACGCCGAGGCTGACGACGAGTTACAAAACGACAACGTTTTCAAAACCGAACACGAAGTCATCTCCCGGAGCCCTAAAAGAAGCAAGAACTTCCAGGACTCCGCCGATGCGTGCAGCTTCTTCGGCGATATCGATTTCAATTTCTTCTTGAGAAATAATCGGGAGATAATGGACGCGATTGCTAACTGTGGAGGTGGGGTGGCGGAGGGTCCTTTATGGGCACAGAATCTCACACCTAAGCTCTCGACCATTTCAGCCACTATAGATTCCCAGTCTTCTATTGTGAGCAGCCCAACATCAGCTAGCAATTTGATGGGCAGAGAGCACCAAAGAGGCGCCAACAGCGGGTCCTCCGAGGATCAATCGGACGATGAGATTGAGGCTGGGTCTTGTGAGCAAAGCAATGACCCTCTTACTTTGAAGAAGATCAGAAGAATGATCTCTAATAGGGACTCGGCTAGACGGTCGAGACGACGAAAACAAGCTCATTTGGCTGAACTCGAGAGTCAGGTGAAACAACTTAAAGTAGAAAACGAAACGTTGTTCAACCAGCTTTTAGATGCAAGTCAGCAATACCGTGATGCCAATACAAACAACCGAGTGCTTAAATCAGACGTGGATGCGATGAGAGCCAAGGTAAAGTTAGCTGAAGATACACTCGCTAGAGGCTCAATGACCAGTAGCTTGAACCAGCTCCTACAGAATCATTTGAGCACGCCGCAGCCACTAACCGTGCTGCGGCGGATGTCGAATATCCCATTGCCACTCGGTCTTCCCGGAGACGACGTTTCTTATTCTGGCGTGACAATGTCGAGCCAGAACCCAGCCACCCGGCTCGCAGAAACTGGAATGGCTAGTGAGGCTGTTAGCTGTGTGTCTGAGATTTGGCCTAGAAATTAG MKRSASELALEELLETTAIASPEVIDAEADDELQNDNVFKTEHEVISRSPKRSKNFQDSADACSFFGDIDFNFFLRNNREIMDAIANCGGGVAEGPLWAQNLTPKLSTISATIDSQSSIVSSPTSASNLMGREHQRGANSGSSEDQSDDEIEAGSCEQSNDPLTLKKIRRMISNRDSARRSRRRKQAHLAELESQVKQLKVENETLFNQLLDASQQYRDANTNNRVLKSDVDAMRAKVKLAEDTLARGSMTSSLNQLLQNHLSTPQPLTVLRRMSNIPLPLGLPGDDVSYSGVTMSSQNPATRLAETGMASEAVSCVSEIWPRN Homology
BLAST of CmoCh12G002240 vs. ExPASy Swiss-Prot
Match: Q9FUD3 (Basic leucine zipper 9 OS=Arabidopsis thaliana OX=3702 GN=BZIP9 PE=1 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 4.3e-45 Identity = 121/235 (51.49%), Postives = 152/235 (64.68%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy Swiss-Prot
Match: Q6H500 (bZIP transcription factor RISBZ4 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ4 PE=2 SV=2) HSP 1 Score: 156.8 bits (395), Expect = 4.3e-37 Identity = 104/207 (50.24%), Postives = 140/207 (67.63%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy Swiss-Prot
Match: Q6ETX0 (bZIP transcription factor RISBZ3 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ3 PE=1 SV=1) HSP 1 Score: 145.6 bits (366), Expect = 9.8e-34 Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy Swiss-Prot
Match: Q654B3 (bZIP transcription factor RISBZ5 OS=Oryza sativa subsp. japonica OX=39947 GN=RISBZ5 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26 Identity = 100/258 (38.76%), Postives = 143/258 (55.43%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy Swiss-Prot
Match: Q99090 (Light-inducible protein CPRF2 OS=Petroselinum crispum OX=4043 GN=CPRF2 PE=2 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 2.2e-25 Identity = 69/132 (52.27%), Postives = 96/132 (72.73%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy TrEMBL
Match: A0A6J1GHL3 (basic leucine zipper 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454249 PE=4 SV=1) HSP 1 Score: 607.4 bits (1565), Expect = 3.4e-170 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy TrEMBL
Match: A0A6J1KL96 (basic leucine zipper 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496270 PE=4 SV=1) HSP 1 Score: 605.1 bits (1559), Expect = 1.7e-169 Identity = 323/324 (99.69%), Postives = 323/324 (99.69%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy TrEMBL
Match: A0A6J1GIR8 (basic leucine zipper 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454249 PE=4 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 1.1e-168 Identity = 324/326 (99.39%), Postives = 324/326 (99.39%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy TrEMBL
Match: A0A6J1KNX5 (basic leucine zipper 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496270 PE=4 SV=1) HSP 1 Score: 600.1 bits (1546), Expect = 5.4e-168 Identity = 323/326 (99.08%), Postives = 323/326 (99.08%), Query Frame = 0
BLAST of CmoCh12G002240 vs. ExPASy TrEMBL
Match: A0A0A0LLM9 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G376830 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 8.7e-118 Identity = 249/333 (74.77%), Postives = 272/333 (81.68%), Query Frame = 0
BLAST of CmoCh12G002240 vs. TAIR 10
Match: AT5G24800.1 (basic leucine zipper 9 ) HSP 1 Score: 183.3 bits (464), Expect = 3.0e-46 Identity = 121/235 (51.49%), Postives = 152/235 (64.68%), Query Frame = 0
BLAST of CmoCh12G002240 vs. TAIR 10
Match: AT5G28770.1 (bZIP transcription factor family protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.7e-20 Identity = 66/168 (39.29%), Postives = 101/168 (60.12%), Query Frame = 0
BLAST of CmoCh12G002240 vs. TAIR 10
Match: AT5G28770.2 (bZIP transcription factor family protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.7e-20 Identity = 66/168 (39.29%), Postives = 101/168 (60.12%), Query Frame = 0
BLAST of CmoCh12G002240 vs. TAIR 10
Match: AT3G54620.1 (basic leucine zipper 25 ) HSP 1 Score: 92.8 bits (229), Expect = 5.4e-19 Identity = 56/141 (39.72%), Postives = 91/141 (64.54%), Query Frame = 0
BLAST of CmoCh12G002240 vs. TAIR 10
Match: AT4G02640.1 (bZIP transcription factor family protein ) HSP 1 Score: 90.9 bits (224), Expect = 2.0e-18 Identity = 68/165 (41.21%), Postives = 101/165 (61.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|