CmoCh12G002070 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh12G002070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionTranslation initiation factor IF-2
LocationCmo_Chr12: 1366692 .. 1370099 (-)
RNA-Seq ExpressionCmoCh12G002070
SyntenyCmoCh12G002070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCGGAATTTTGATACTTCTTGTTCACATTTATTTTTATTATCTTATTCTGAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAGAAAAGGACAGTAAGAAGAAGAACGAAGAAGACGAGAGGAAGAACAACATTGATTCTTTTGACAAAAATAGTCAAAATTATTAAGCAAAAACAGAAGCCCATTATGGTTTCAGACCCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTACCCATTTAGCAAAATTTAAGGTTTATTATTGTCTGATTCAGATTTAGCTTCCGCGAATTGGGGATTTTGTGTTTGTCTGGTTGGATTAATGTTTTGTAACGCATCTAATTTGTCGATTGGTAACCGTAGCGGATTTGGGGCAATTGAAATTTGGATTACTCCGATTGGGCAATTAGGTTTAGATTCTAAGTGGGGTTGTTTGTTTTCTTCTTGGAAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTACTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATACGATCCACCTGAAGAGGTTTGAATGTTTTTTTCCTTGTTTGTTTTTAGTTTATGTTATTGATGAACTCATCATTGTTGTCGTGTTCGTATGTTGGTGAGCAGAGAGAGCCGCTTCGGATATTTTATGAATCCTTGTCGAAACAGATATCAACAAGTGAAATGGCAGAATTTTGGTGCGGTTTGTTTTCTGATTTTCTTTTGAGCATTCATTGTCTGTTTAATCCTTTGAGTTCTTCATTGTTGTCGTGTTTGTATGTGATCCTTTGGTTTATGATACTCTGTGTTAGCATTTGGTTTGATGCTTCCTCAATCTTGCTGTTGTGAGTGCTTTTCGTAGCAGTCGGTTTCGTTTTGTTTGACGAAAAGCTAGTGGTACTAGTGAAATCGGACGACGTTTGTGAGATCCCATATAGGTTGGGGAGGAGAACGGAGTATTCTTTATAAGGGTGTGGAAATCTCTTCCTAACAGACACGTTTTAAAACCTAGAGGGAAAACACGGAAGGGAAACCCCATAGAGGACAATATCTGCTAGCGGTGGGTTTGGGATGTTACAAATGGTATTAGAGTCAGACATCGGGCGATGTGTCAGTGAGGAGGCTGAACCCCAAAGGGGTGGACACAAGGCAGTGTGTCAGCAAGGACTCTAGGCCTTGGGGGATGGGTTGGGGGGTCTCACATCGATTAGAGAAGGGAACTAGTGTCAACGAGGACACTAGATCCCGAAGGGGGGTGGATTATGAGATCCCACATCGGTTGGGGAGGAGAACGAAGAATTCTTTACAAGGGTGTGGAAACCTCTTCCTAGCAGACGCGTTTTAAAACTTTGAGGGGAAGTCCGGAAGGGAAAGCCCAAAAAAGACCATATCTAGCGGTTGGCTTGGGCCGTTACAAATTGCTAGATTTGAATTTTAGGGACTAAATGCAACCAAAGGCATACGCGAGCGATTGATTTTTAGGGGTAGATATGTTATGTCGAACAACTTTACGACTCAACTAAGTAGTTCCTTTTGGTTTGGGTTATTCCATGTTTCGAGACTTGGTCGATATTTTGGTAACTTGGACAAGATGAACTATTGGATTAAGACTGGAACTTTTTGTGTCTGATTTGAACGTTGGGATAACTTGCTAGCCCATATTGGTTGAGGAGGAGAACAAAACATTCTTTATAAAGGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAAAACCTTGAGGGGAATCCTGGAAGAGAAAGCCCAAAGAGGACAATATCAGCTAGCGGTAGGCTTACGCTTGTCCTTCGCCCGCATCTGATCCTATAAGGCGTGCAATGTGTTGTTTATTGACGTGTAGATGGCATGTTGTTCTAATAGCATAGGTTTTTTTTTTTTTTTCTTGGAAGTTAATGTTATATTTAGTGTTGCAACCATATTGTTATTTATGGACCTCAAGGGGTGGTCTTTGGCGGTAAGGGCTATAGTGAGCTCACGGAACGATGTTTCGGTGGAAGGGTTTCTCTTTTCCACCCCGAACAAGGTTGTCATTCAAAGATGGTTTAGTCTACACGTAGAAATGGTTAAGTCATCTGTCAATAGAATCCTCAAGTGTCGAATAAAGAAGTTGTGAGTCTCGAAAGTATAATCAAAAGTAACTCAAGTGTTAAACAAATAGTGTAGTTTGTTCGAGGTCTCCAAAGAAGGAGTCGAGCCTCGATTAAGGGGAGACTATTCGAGGGTTCCATAAGCCTCAGGGGAGTCTCTATGGTGTACTTTGTTCGAGGGGAGGATTCTTGAAGCCTCGTTTAAGGGGAAGCTATTCGAGGGATCCATAAGCCTCAGGGGAGGCTCTATGGTGTACTTTGTTCGATTGGAGGATCGTTGAGGATTGTTGGAAGGGAGTCCCGTATTGGCTAATTAAAGCGATGATCATGGGTTAATAAGTACGAAATATATTTTCATTGGTACAAGGCTTTTTTGAGAAACCAAAAGTAAAGTGACGAGAGCTTATGCTCAAAGTGATCAGTATCATACCACCGTGAGGTTCGTGATTCCTAACAAATTCTTCATTCTCTGGCTGAACCTTAGTGTGACTTTTTGGCTGTTGGGTCATCAAGTTCTTTTATTTATTTTATACTCCGACTTCCCTCCGTGAAAAATATCCCCATATTACTTGTCTTTGTGGATATATATTTTTGATCTCCTGGTTAAGAACATATATTTGAATCAGTTGAGCTATGTTCATATTGGTGACCTGACCAGTTTAAATTTCTAGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAAAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCATCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACAATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCTGCCAACGCCCACCTCCCCCTCGTTTTTAGTAGCATACTTTTCGAAAACTACAGAGATTATCATAACCCAGTATTTATCAGGACGTTCTTTTATGGTTCAAAACCTTCTCATACAACGTGTAATTACTCGGGTCGAGTACGACACCCAATCAATAACTATGGACCCATCTGAGAAACTCGAGCCTAAATTTCCTCTCGGCCTTGGAAGTAAACAAAACAG

mRNA sequence

GGCGGAATTTTGATACTTCTTGTTCACATTTATTTTTATTATCTTATTCTGAAGCAGCTCGAATGGATATATCTTCAGCAGGAAGAAGAAGAAAAGGACAGTAAGAAGAAGAACGAAGAAGACGAGAGGAAGAACAACATTGATTCTTTTGACAAAAATAGTCAAAATTATTAAGCAAAAACAGAAGCCCATTATGGTTTCAGACCCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTACTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATACGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAATCCTTGTCGAAACAGATATCAACAAGTGAAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAAAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCATCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACAATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAGGAAAAACGCCTGCCAACGCCCACCTCCCCCTCGTTTTTAGTAGCATACTTTTCGAAAACTACAGAGATTATCATAACCCAGTATTTATCAGGACGTTCTTTTATGGTTCAAAACCTTCTCATACAACGTGTAATTACTCGGGTCGAGTACGACACCCAATCAATAACTATGGACCCATCTGAGAAACTCGAGCCTAAATTTCCTCTCGGCCTTGGAAGTAAACAAAACAG

Coding sequence (CDS)

ATGGTTTCAGACCCCAAACCCACTGTTTCGAAGGTCAAACTAGGTCATCAAGATGGCGGCTCCAGGTTAAAGCTCGAATCCTCCGACAACAAGAAGAACAACAGCTCAGTTTCCTCTTCCAAACACAAATCCGTCTCTGTTCTTCCCAAATCCGAGGTGAAATCTAAAACAATAACGAGTTCTTCAAAGACCACAACAAAAGCTACTACTTCTACTGCTAAAGTGAGAGAAAAGAAAGTGTTCAATTTGGCTGGTCAGAAATACGATCCACCTGAAGAGAGAGAGCCGCTTCGGATATTTTATGAATCCTTGTCGAAACAGATATCAACAAGTGAAATGGCAGAATTTTGGATGATGGAGCATGGCATGTTATCTCCCGAAAAGGCGAAAAAGGCGTACGAGAAGAAACTGAGAAGACAAAAGGAACAAAGGACCGGGACTCCGATTAAATCATTAAAACCACCGAGCAGACCAGAGAGCTCACAGAGGCCACAGCAGCCATCGAAGAATGGCGATCTAAAAGCAAAGAAAAAGATCACGAACAATAGCGATGACGACGACAATGACTTCATTTTAAGCCCCAAGAGAAGAAAAATGTAG

Protein sequence

MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITSSSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKITNNSDDDDNDFILSPKRRKM
Homology
BLAST of CmoCh12G002070 vs. ExPASy TrEMBL
Match: A0A6J1GJC9 (uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454380 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.2e-97
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0

Query: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60
           MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS
Sbjct: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME
Sbjct: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 200
           NNSDDDDNDFILSPKRRKM
Sbjct: 181 NNSDDDDNDFILSPKRRKM 199

BLAST of CmoCh12G002070 vs. ExPASy TrEMBL
Match: A0A6J1KPA8 (uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 194/199 (97.49%), Postives = 196/199 (98.49%), Query Frame = 0

Query: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60
           MVSD KPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS
Sbjct: 1   MVSDAKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60

Query: 61  SSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMME 120
           SSKTTTKAT+STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTS MAEFWMME
Sbjct: 61  SSKTTTKATSSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSVMAEFWMME 120

Query: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKKIT 180
           HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQP KNGDLKAKKKIT
Sbjct: 121 HGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPPKNGDLKAKKKIT 180

Query: 181 NNSDDDDNDFILSPKRRKM 200
           N+SDDDDNDFILSPKRRKM
Sbjct: 181 NDSDDDDNDFILSPKRRKM 199

BLAST of CmoCh12G002070 vs. ExPASy TrEMBL
Match: A0A1S3BCG5 (uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488185 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.4e-72
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0

Query: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKN-----NSSVSSSKHKSVSVLPKSEVKS 60
           MVSDPK T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS++ KSEVKS
Sbjct: 1   MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKSEVKS 60

Query: 61  KTITSSSKTTTK---ATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSE 120
           KTI+SSSKTTTK    TT+TAKVREKK+FNL GQKYDPPEEREPLRIFYESLSKQI  SE
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKIFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK--SLKPPSRPESSQRPQQPSKN 180
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK  S KP SRPESSQRPQ PSKN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 181 GDLKAKKKITNNSDDDDNDFILSPKRRKM 200
           GD+KAKKKI N+SDDDD DFILSPKRRKM
Sbjct: 181 GDIKAKKKIMNDSDDDD-DFILSPKRRKM 205

BLAST of CmoCh12G002070 vs. ExPASy TrEMBL
Match: A0A0A0LLY4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.4e-72
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0

Query: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKN-----NSSVSSSKHKSVSVLPKSEVKS 60
           MVSDPK T+SK+K    DGGSRLKLESSD+KK       +S+ SSKHKSVS++ K+EVKS
Sbjct: 1   MVSDPKSTLSKLK---PDGGSRLKLESSDHKKKIDSSIKNSIPSSKHKSVSLVTKAEVKS 60

Query: 61  KTITSSSKTTTK---ATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSE 120
           KTI+SSSKTTTK    TT+TAKVREKKVFNL GQKYDPPEEREPLRIFYESLSKQI  SE
Sbjct: 61  KTISSSSKTTTKTTTTTTATAKVREKKVFNLPGQKYDPPEEREPLRIFYESLSKQIPASE 120

Query: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK--SLKPPSRPESSQRPQQPSKN 180
           MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIK  S KP SRPESSQRPQ PSKN
Sbjct: 121 MAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSASAKPLSRPESSQRPQPPSKN 180

Query: 181 GDLKAKKKITNNSDDDDNDFILSPKRRKM 200
           GD+KAKKKI N+SDDDD DFILSPKRRKM
Sbjct: 181 GDIKAKKKIVNDSDDDD-DFILSPKRRKM 205

BLAST of CmoCh12G002070 vs. ExPASy TrEMBL
Match: A0A6J1K794 (uncharacterized protein LOC111491788 OS=Cucurbita maxima OX=3661 GN=LOC111491788 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 4.2e-70
Identity = 161/202 (79.70%), Postives = 177/202 (87.62%), Query Frame = 0

Query: 1   MVSDPKPTVSKVKLGHQDGGSRLKLESSDNKKNNSSVSSSKHKSVSVLPKSEVKSKTITS 60
           MVS+PKPTVSK K G+QDGGSRLK++SS    N     SSKHKSVSV+ KSEVKSKT +S
Sbjct: 1   MVSEPKPTVSKQKPGNQDGGSRLKIDSSIKNSN----PSSKHKSVSVVTKSEVKSKTSSS 60

Query: 61  SSKTTTKATT--STAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWM 120
           SS+ TTK TT  +TAKVREKKV+NL GQK DPPEEREPLRIFYESLSKQI  SEMAEFWM
Sbjct: 61  SSRATTKTTTTVTTAKVREKKVYNLPGQKCDPPEEREPLRIFYESLSKQIPASEMAEFWM 120

Query: 121 MEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPESSQRPQQPSKNGDLKAKKK 180
           MEHGMLSPEKAKKAYEKKLRRQKEQR+GTPIKS K  S+PESSQRPQQPSKNGDLKAK+K
Sbjct: 121 MEHGMLSPEKAKKAYEKKLRRQKEQRSGTPIKSPKLLSKPESSQRPQQPSKNGDLKAKQK 180

Query: 181 I-TNNSDDDDNDFILSPKRRKM 200
           + TN+SDDDD++FILSPKRRKM
Sbjct: 181 VTTNDSDDDDDNFILSPKRRKM 198

BLAST of CmoCh12G002070 vs. TAIR 10
Match: AT5G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.7e-36
Identity = 95/169 (56.21%), Postives = 120/169 (71.01%), Query Frame = 0

Query: 36  SVSSSKHKSVSVLPKSEVKSKTITSSSKTTTKATTSTAK---VREKKVFNLAGQKYDPPE 95
           +++++   +  V  K++  S  ++     TT AT S  K    REKKV++LAGQK+DPPE
Sbjct: 74  TIATTSAAASLVKGKAQTTSTVVSLVKAKTTSATVSLVKGKAKREKKVYSLAGQKFDPPE 133

Query: 96  EREPLRIFYESLSKQISTSEMAEFWMMEHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSL 155
           EREPLRIFYESLSKQI  SEMAEFW+MEHGMLSPEKAK+A+EKK R+ K+ R GTP KS 
Sbjct: 134 EREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSKSA 193

Query: 156 KP-PSRPESSQRPQQPSKNG-DLKAKKKITNNSDDDDNDFILSPKRRKM 200
               S+ ESSQR      NG D + KKK+ ++ DDDD+DFILS KRRK+
Sbjct: 194 PTFSSKAESSQRTSASKNNGLDARKKKKVVDDDDDDDDDFILSHKRRKV 242

BLAST of CmoCh12G002070 vs. TAIR 10
Match: AT1G19990.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11600.1); Has 11256 Blast hits to 7192 proteins in 541 species: Archae - 6; Bacteria - 629; Metazoa - 4714; Fungi - 936; Plants - 545; Viruses - 34; Other Eukaryotes - 4392 (source: NCBI BLink). )

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-17
Identity = 81/205 (39.51%), Postives = 102/205 (49.76%), Query Frame = 0

Query: 15  GHQDGGSRLKLESS-----DNKKNNSSVSSSKHKSV----------SVLPKSEVKSKTIT 74
           G+  G  +LK E +     DNK   SSVS S+ K V             P S+  S    
Sbjct: 34  GNNAGSKKLKKEENDDDDDDNKPIKSSVSGSRAKPVKKKEEIDKDDEKKPVSKRNSSVGV 93

Query: 75  SSSKTTTKATTSTAKVREKKVFNLAGQKYDPPEEREPLRIFYESLSKQISTSEMAEFWMM 134
           S      +      K RE+KV++L GQK + P+ER+PLRIFYESL KQI TS+MA+ W+M
Sbjct: 94  SKENKKPEKEEEVKKKRERKVYDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLM 153

Query: 135 EHGMLSPEKAKKAYEKKLRRQKEQRTGTPIKSLKPPSRPES--------------SQRPQ 190
           E G+L  EKAKK  EKKL  QK  +  +P+KS     R  S              S+   
Sbjct: 154 ESGLLPAEKAKKVLEKKL--QKGGKLSSPVKSAASTPRSNSKSVTVKKKEVQKSPSEALS 213

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GJC95.2e-97100.00uncharacterized protein LOC111454380 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KPA81.2e-9397.49uncharacterized protein LOC111496374 OS=Cucurbita maxima OX=3661 GN=LOC111496374... [more]
A0A1S3BCG53.4e-7280.86uncharacterized protein LOC103488185 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0LLY44.4e-7280.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G374600 PE=4 SV=1[more]
A0A6J1K7944.2e-7079.70uncharacterized protein LOC111491788 OS=Cucurbita maxima OX=3661 GN=LOC111491788... [more]
Match NameE-valueIdentityDescription
AT5G11600.11.7e-3656.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G19990.11.4e-1739.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..199
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..199
NoneNo IPR availablePANTHERPTHR33828:SF1OS05G0596200 PROTEINcoord: 7..198
NoneNo IPR availablePANTHERPTHR33828OS05G0596200 PROTEINcoord: 7..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh12G002070.1CmoCh12G002070.1mRNA