CmoCh12G001400 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G001400
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Serine hydroxymethyltransferase
Location	Cmo_Chr12: 877709 .. 885550 (-)
RNA-Seq Expression	CmoCh12G001400
Synteny	CmoCh12G001400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATCCTCTTCATAATCCCTATATATATGTATGTATGGTACAAATTAGTTAATATTGTAGTAAAAGAAAAAAAAAGAAGAAGAAATTTCCGTATCGGAGAAGACAATCACCGGCGGAAACCAAAGGCAATGTTTCTAAGAAGAGTCGCCGTCGGTGCTACGAAACTCAATGTTGCTCCGGCGAATGGGCGGTTCCTCCTCCGTCACATGGTTGTTTTTTCTCTCTCCTCGCCGCCAGTTCGTAATTTCTATGATTTTTCTTTCTTGATGTCTAAATTTTCCATCGGTTTTCTATGGTCGCAGTCTTCTCGGTACGGGTCCACGGCGGAGGAAAGGGAGGCTCGAGCAACTGTGAGCATTCCATTTCTATTATTATTATTATTATTATTATTATTAAATACATTTATTTAATCCCAAAATTATTAATATTAATTTATTCAATTATGACTCGTAAAAATATTTATATTTTTTTAGTTAAAAATATTTTGAAATTTTGTTTATATTTTGTTTGTAATATAATTTCATTTATTTCTTGAAAAAAGTATATTATTTAAGCGGAAAATTGTGAAAACGAACCCATGATGGGGGACATGCAGCACTCTTTGATGTCACTATCAAGTTATTTAAAAGTTATTTTATTTTATTTTTATTTTTATGTTTTCTATTTTTTAAAAAACAGAAATTATTGATTTTTTATTTTTTGAAAATAGAATGTAACTATTAGATGTTTAAATCAATTCTTTATTTGATGTATTAATTATTAGAAATAATTATATTTTTATTTTTAAAAAGACATTTATTTAGATATGTTTAGCGTATCAAAATTTTATATAAACAAATAATATTTCGATTTTAATTTTTATAATTACGTATTAATTATTTATAGATAATTAATTAGGATTAGTTTATTTATTTTTATTAAGTCAAATTATTAAAACAATTTTATCCACTCGGATTTAATTTTCTTCCTTAATAAATATATTATGAATCATATGTCATAATTTTAGCGTATTTTTAATTTATTTAGCGATCTATCTTAACAACTATCTTCAAATAAATGAATATAATAAATTATTATACACTTTTAATGGTAAATAATTAGTATAACAAAAATTAATTATATATGTTATATTTCTTTTATATTAAGAAAACATTTTTTTTTCATAGTTTCATGTTAGCTAAAGATTATACAGATACAATAAGTTACATGTTAAAATTAACGCATAAAATAGCGTTATCATATGTTAATTTAGAATAAATAAAGATATTAAGCGCGAAATAAATGAATGCCCGTCAAAATATATTTTTAACCATAAAAGAATTAAGTTGTTAGACGAACACGAGTCTCCACAATGGTATGATATTGTCCACTTTGAGCGTAAGCTCTTATGGCTTTTCTTTGGGCTTCCCCAAAAGGCCTCATACCATTGTGGAGAGTCGTGTTCGTTCGTCTAACATGGTATCAGAGTAGCTCTAAATTTAGTCGTGTCAATAGATTGGTAAATTCTCAAATGTCGAACAAATGACTCCAAAAGAAGAAGGAGTCAAGCCTCCTCGAAGACAGTAAAAAATGACTAGGACTCCAAAGAAGTCGAGCCTCGATTGAGGGGAGACGTGCTTTGTTCGAGGGGAGGTGTTGGATGATGAAAGTCCCACCTCGGCTAATTTAAGGAATGATCATGGGTTTATAAACAAAGAATACTCTTTCCATTGTTACGAGGCCTTTCGGGGAAGCCCAAAGAAAATCCATGAGAGCTTAGGCTCAAAGTGGACAATATCATACCATTGTAGAGACTCGTGATTCGTAGTAAATACATGATTGATCAATTAATTTTGGTTTCAGTGGGTTAAGCAGCTGAACGACCCCATGGAGGTCGTTGCTCCGGAAGTGGTAGATATCATTGAGCGCGAGAAAGCTCGTCAATTCAAGGTTTTTTATTTGAAATGCTTGATTGAATTGATTTGAGCTTAGTTTCGTGGTTAATTCTTGTGCAATTCATTTATAAATGTGAAGGGTCTTGAAGTTATAGCGTCAGAGAATTTCTGCTCAAGAGCAGTGATGGAAGCAATTGGTTCGATTATGACCAATTCATCTAGTGATGGATATCCCGGTGCCAGATACAGTGGAGGAACTGAGTCTGTCAATCATTCTATCTCAATTCCACGCTACAATTTCCTTCATTCTATTCCTGTTTTAATTAATGATAAACCCCAAATGGATTTAGGTACTTGGACATCATTGAAAACTGGTGCATGGAACGTGCTCTACAAGTTTTTCGTTTGGACCCTGCAAAATGGGGAGGTATCGTTATCATCATCATCATTATCTTCTTCTTCGTTTTAGTACTACAATCGGGAGCAAGCTTAACAAGTATTGTTGTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCTCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGAAGTCCAAAGAGGACAATATCTGCTAGCGGTAGATCTGGGTTGTTACAAATGGTATCAGAGCCAGACATCGGACGATGTGTCAACCTTCTCGCTGTTTCCCGAATGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCCAAAGGAGGGTGGATTTGGGGGCGGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGATGCTGGGCCCCGAAGGGGATGGATTGTGATGTCCCACATCGGTTGGGGAGGAGAACAAACCACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGTGTTTTAAAGCCTTGAGGGGAAGCCCAAAGAGGGCAATATCTGCTAGCGGTGGATCTGGGTCGTTACATGTTGTCGAATGGTTATGATCAAATTTTGTTTCAAATTCTGTCTATTGACGTATATTTCTTTTCTCGAGTTTCTTGTGATTCAGCTGGTATATTTGCGAACATTTTCAGAACTAGTATGAAGTTGACTAACTGAGCATGCTCTATTGTTTTTAGTTAATGTGCAGACTCTCACTGGATCCATAGCTAACTTTCAGACATATACTGGATTATTGAAACCTCATGAGAGGATAATGTCTCTTGATTTACCACATGGTGGACACCTTTCTCATGGTTATCAGGTGCTTAATTTTCAAATCTAATAGGTATTAGTTTTTGGTTAAAGCACAAATTTGATTTTATCCCAATGATTTTGACCGTATAGTTCTTGTGATGTCCCACATCGTTCGAGGAGGAGAACGAAATATCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCGTAATGGGGAAGCCTGTAAGGGAAACTCAAAAACCTTGAGGGGAAGCCTGGAAGGGAAAGCCCAAAGAGGACAGTATTTGGATGAGCACGAGTTTCGTTGTGTAACTCTAAAAAACGTGTTTTAAAAATCTTGAGGGGAAGCCCGAAAGAGGACGATATCTACTAGTGGTGGACTGGGTTGTTACATTTCTTCTTTCAGAACATGAATTTGTTAGCGACTGCTAACAGTGGAGACTATTTATGAAGTTGTATCAAACCATATGGATGAAATTCTATATTTCTAGCTCTCTCTCCAAACCGAAAGGGTTAACATTATAATTTAATCACTAGTTGCTTTGGGTGATTTCATGTGGTGTCCCTCATTGATCGGAGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGCCGTTACAAATGGTATCAGAGTCAGACACCGGACGATATGCCAGCCTTCTCGCTGTTCCTCGAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGTTGGGCCCCAAAGGGGGTGGATTTGGGGGCGATCCCACATCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGCTGGGCCCCGAAGGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTTTCCGGTGTGGAAACCTTTCCCTAGGAAACGCGTTTTAAAGCCTTGAGAGGAAGCCCGAAAGGACAAGCCCAAAGAGGACAATATCTACTAGAGGTGGATCTTTTAAAACGTGTGTATTTATATATGTTTCTTTGAACTTTTGCAGACGGCTACCAAGAAAGTTTCTGCTGTTTCATTATTCTTCGAGACAATGCATTATAGGTTGGATGAGAAAACTGGTTACATTGACTATGATGGGGTCAGTAAATGCTTCTGTACTATTTGAACGAATTGTATATTGATATTCCGTTGTTTTTCTTGAAACTGCAATCCAAATAATCAAAACTCATACGCAGATGGAGAGAAGTGCATCTTTGTTCCGACCAAAACTCATTGTTGCTGGTGCAAGTGCCTATGCTCGTCTGTTTGATTATGCACGAATTCGAAAGGTTTCTTCTTCCTTTACATGCCTATAGATTACAATTTAGAATATCGATTAGAAATCACGACTCTTCACAATGGTATGATATTGTCCACTTTGAGTATAAGCTCTCATGGCTTTGCTTCGGACTTCCCCAAAAGGCCTCATACCAATGGAGATAGTATCCTCACTTATATACCCATGATCTTCCACGAAATTAACCAATGTGGGACTCACTCCTAATAATCCTCAACAATATCTCCATCTGGGTTTTACTTTTAAACTTGTAACAGAACATTTGGTTGAATGTTGTGATAGATCTGTGACGAACATAAGGCAATCATGATGGCAGACATGGCACATCTTGCTGGTTTAGTTGCAGCAGACGTTATTCCATCTCCTTTTGAGTATGCTGATATTGTGACAACAACCACAAATAAATCCTTACGTGGACCACGAGGAGCTCTGATTTTCTACCGAAAGGGCGTTAAAGAGATCAACAAAAAAGGAGAGGAAGTAAGTGAGATCTTAAAAGAGAATGTTACTACTGTTAAGAATCACGAGTCTCCACAGTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTCGGGCTTCTCCAAAAGGCCCCATACCAATGGAGATAGTATTCCTCACTTATAAACCCATGATCTTCCATTAAATTAACCAACGTGGGACTCACTCCCAATAATCCTCAACAACTACTGCGTCTTTCGTGATTCTTAGGATGTAAATATAAGTTCCAAGGGAAAGTTCTTTGTTGTCTAATATTTTCATTACAATCTACGACAGGTGCTCTATGACTATGAAGACAAAATCAATAACGCTGTCTTTCCTGGTGTTCAAGGTGCCTCACACAACCAAAAACTAGCTGGCCTGGCGATTTCACTAAAACAGGTCAACACTTTCTTAGTTGTCTAATATTTTAGTGGCTAGTTTGTATCCTATTTAAAGCTTATGAATATCAATGACAACATACTTTCGATCCCAATTCTATTTCTGTTTCTCATTCTTAACGGTTATCTTTGCTAGATTTAGCTATCGTTTTCATTCGCTTTATTTCTCTTCTTTATCATGTTGCAATAGGCAATGACTCCGGAATACAAAGCCTACCAACAGCAGGTTCTCAGGAATTCTTCAAAACTTGCTCAGTGTTTGATTGAGAAGGGGTATGAGCTTGTATCTGGTGGAACTGATAATCATTTAGTCCTTATAGATTTGAAAAATAAGGTAAAGGGTGACTTCCTGTTAATTCTCGTCTAGATATTTTTGTTTATGTAGTGATGACAAATTAAAGATCCATTTGAAATGATTTTTCAAGTGATCAAAAATCATTCTGAAGCTAACAATCATCCCGAGTTATTTTCAAGGTCTTGCTTGAGGATTTATCGAACGTTTTTTAAAGTTCAATAACCAAATAAACACAATTTAAAGTTTAGGAACTAAACTTGTAATTTGACGTATTTTCAATAAATGTTGTCATTGACTTGATTTGGCAGGGTATTGATGGGTCAAGAGTCGAGAAGGTTTTGGAATGGGTTCGTATTGCAGCTAACAAGAACACAGTTCCAGGGGACGTATCTGCCGTGATTCCGGGTGGCATCCGTTTGGGTATGGCCTTGTTTTTGAAATTTTTTTGAAATTTTCTGATTGTTGGTCTTATTCGAGGGCTCTAACGGCCTTAAGAGAGGCTCTATAGTGTACTTTGTTCGAGGGAAGGATCGTTGAGGATTGTTGGGATGGACTCCCACGTTGGCTAATATAGGGAATGATCATGGGTTTATAAGCAAGGAATAGTATCCCTGTTGGTACGAGGCTTTTTGGGAAAGCCCAAAACAAAACCATGAGAACTTATACTTAAAGTGGACAATATCATACCATTGTGGAGATCCGTGATTCCTAACAAGTCTAATATCTAAATTTGTGTATATAGGAACTCCTGCTTTGACTTCAAGAGGCTTACTCGAAGCGGATTTTGCTCAAGTAGCTGAATTTTTTGATGAAGGTGTGAAGTTGGCCTTGAAAATTAAGGCCGCTGAACCTAAAGGTTGGTTCTCTAACATAATATCGAACAACTATCTTTTAGAATCCTTTGATATACTCAATCTCGGTTTTCAAATATTATGAACACAGGCGCTAAGTTTAAGGATTTCGAGACAACCATGAAATTAAATAAAGAATTCCAATTTGAAATCTCAAAGCTCCGACACGAGGTTGAGGAGTTTGCCATGCAGTTTCCAACTATAGGTTGTGATAAAGAGACAATGAAATATTGAGACGGAATAACGGAGTCGGGTTAGAACATCTCTCCCTAACTCGTTGAACGTTACAAACCCATTTTATAAGTACTTGAAAAGTCATTTTTAAATTGCTTCACAACACCATTAGATACTCAAAGTATTCCATTTGATGACCATCTGATTTTTAGTTTTGGGCATGTGTTTGCAGATATCTTCATTGTTAAGGTGGCTGGCTCCGACCCTCGAGCAAATATCCTTTCAAAATGATGCCCACCGGCCCCATAGATCTGTACGTTTCCACTGAATAAATGTTCATTACGAGCCGTCTTTTTACGCTGTTGATCTTAAAAACATTGTATAACCAAAATAATATTTGAGATAGAATTATTTTCTATGATTATATATTAATAAAGAAAATGGAAGTAGATTCTGATACCAGCCCACCGATCCTGTTGACCCTATCACGTGGCACACATGCAATATTCAACGTGCAGACGGGATTAATTATTGTAATTTTCTCTCTATTCTTAAAGGTGCAGACTTTCTCTCTCTCTTCATCTATCTCATTGTGCTCATCTTCATCATTCTTATCTCACGGTGTTCATCTTCTCCGTTGATGTCCTCATCTCGGACGTCGATCTAGCTCGTTGGTCACCTCTTTATTTCTCTGTCAGACTCTCTTCTCTGCTCCCATTTCTCCACTCGACTTTGTCGACATCGTGCGGATTGTCTCTCCACTCAGCTTTATGTTCTATTTCCATCGAACTTCTATGCTCTGTGTTTCTCGTCGAACTTTTTCGGTTGGCTGTAGTTTTTTCTCCGCTTCTTGTAATCCAAACTCAACCCAAAAAATAGAAGGTTGGGTTGGGTTGGGTTGGTTACCAATCCAACCATCTTGAGAGTTGGTTGAAAAAAAAATCCCTCAACCACAGACATGGACCATGTACACCCTAATTATAAATAACTATTTTTACCCCTAAACTAATTTCATTATTTAATTAATTAGAAAATATATTTGTGAAAAAAATTAAAATTAGAAGGATATTTTTTTAAGTAAAAACTTTTCAAAATTTAAAGAAATAATTGAAACTTAATTAAAGTTAGTCCCCTGTAATTTAACAAAAA

mRNA sequence

TTTATCCTCTTCATAATCCCTATATATATGTATGTATGGTACAAATTAGTTAATATTGTAGTAAAAGAAAAAAAAAGAAGAAGAAATTTCCGTATCGGAGAAGACAATCACCGGCGGAAACCAAAGGCAATGTTTCTAAGAAGAGTCGCCGTCGGTGCTACGAAACTCAATGTTGCTCCGGCGAATGGGCGGTTCCTCCTCCGTCACATGTCTTCTCGGTACGGGTCCACGGCGGAGGAAAGGGAGGCTCGAGCAACTTGGGTTAAGCAGCTGAACGACCCCATGGAGGTCGTTGCTCCGGAAGTGGTAGATATCATTGAGCGCGAGAAAGCTCGTCAATTCAAGGGTCTTGAAGTTATAGCGTCAGAGAATTTCTGCTCAAGAGCAGTGATGGAAGCAATTGGTTCGATTATGACCAATTCATCTAGTGATGGATATCCCGGTGCCAGATACAGTGGAGGAACTGAGTACTTGGACATCATTGAAAACTGGTGCATGGAACGTGCTCTACAAGTTTTTCGTTTGGACCCTGCAAAATGGGGAGTTAATGTGCAGACTCTCACTGGATCCATAGCTAACTTTCAGACATATACTGGATTATTGAAACCTCATGAGAGGATAATGTCTCTTGATTTACCACATGGTGGACACCTTTCTCATGGTTATCAGGCAATGACTCCGGAATACAAAGCCTACCAACAGCAGGTTCTCAGGAATTCTTCAAAACTTGCTCAGTGTTTGATTGAGAAGGGGTATGAGCTTGTATCTGGTGGAACTGATAATCATTTAGTCCTTATAGATTTGAAAAATAAGGTTTTGGAATGGGTTCGTATTGCAGCTAACAAGAACACAGTTCCAGGGGACGTATCTGCCGTGATTCCGGCGGATTTTGCTCAAGTAGCTGAATTTTTTGATGAAGGTGTGAAGTTGGCCTTGAAAATTAAGGCCGCTGAACCTAAAGGCGCTAAGTTTAAGGATTTCGAGACAACCATGAAATTAAATAAAGAATTCCAATTTGAAATCTCAAAGCTCCGACACGAGGTTGAGGAGTTTGCCATGCAGTTTCCAACTATAGATATCTTCATTGTTAAGGTGGCTGGCTCCGACCCTCGAGCAAATATCCTTTCAAAATGATGCCCACCGGCCCCATAGATCTGTGCAGACTTTCTCTCTCTCTTCATCTATCTCATTGTGCTCATCTTCATCATTCTTATCTCACGGTGTTCATCTTCTCCGTTGATGTCCTCATCTCGGACGTCGATCTAGCTCGTTGGTCACCTCTTTATTTCTCTGTCAGACTCTCTTCTCTGCTCCCATTTCTCCACTCGACTTTGTCGACATCGTGCGGATTGTCTCTCCACTCAGCTTTATGTTCTATTTCCATCGAACTTCTATGCTCTGTGTTTCTCGTCGAACTTTTTCGGTTGGCTGTAGTTTTTTCTCCGCTTCTTGTAATCCAAACTCAACCCAAAAAATAGAAGGTTGGGTTGGGTTGGGTTGGTTACCAATCCAACCATCTTGAGAGTTGGTTGAAAAAAAAATCCCTCAACCACAGACATGGACCATGTACACCCTAATTATAAATAACTATTTTTACCCCTAAACTAATTTCATTATTTAATTAATTAGAAAATATATTTGTGAAAAAAATTAAAATTAGAAGGATATTTTTTTAAGTAAAAACTTTTCAAAATTTAAAGAAATAATTGAAACTTAATTAAAGTTAGTCCCCTGTAATTTAACAAAAA

Coding sequence (CDS)

ATGTATGTATGGTACAAATTAGTTAATATTGTAGTAAAAGAAAAAAAAAGAAGAAGAAATTTCCGTATCGGAGAAGACAATCACCGGCGGAAACCAAAGGCAATGTTTCTAAGAAGAGTCGCCGTCGGTGCTACGAAACTCAATGTTGCTCCGGCGAATGGGCGGTTCCTCCTCCGTCACATGTCTTCTCGGTACGGGTCCACGGCGGAGGAAAGGGAGGCTCGAGCAACTTGGGTTAAGCAGCTGAACGACCCCATGGAGGTCGTTGCTCCGGAAGTGGTAGATATCATTGAGCGCGAGAAAGCTCGTCAATTCAAGGGTCTTGAAGTTATAGCGTCAGAGAATTTCTGCTCAAGAGCAGTGATGGAAGCAATTGGTTCGATTATGACCAATTCATCTAGTGATGGATATCCCGGTGCCAGATACAGTGGAGGAACTGAGTACTTGGACATCATTGAAAACTGGTGCATGGAACGTGCTCTACAAGTTTTTCGTTTGGACCCTGCAAAATGGGGAGTTAATGTGCAGACTCTCACTGGATCCATAGCTAACTTTCAGACATATACTGGATTATTGAAACCTCATGAGAGGATAATGTCTCTTGATTTACCACATGGTGGACACCTTTCTCATGGTTATCAGGCAATGACTCCGGAATACAAAGCCTACCAACAGCAGGTTCTCAGGAATTCTTCAAAACTTGCTCAGTGTTTGATTGAGAAGGGGTATGAGCTTGTATCTGGTGGAACTGATAATCATTTAGTCCTTATAGATTTGAAAAATAAGGTTTTGGAATGGGTTCGTATTGCAGCTAACAAGAACACAGTTCCAGGGGACGTATCTGCCGTGATTCCGGCGGATTTTGCTCAAGTAGCTGAATTTTTTGATGAAGGTGTGAAGTTGGCCTTGAAAATTAAGGCCGCTGAACCTAAAGGCGCTAAGTTTAAGGATTTCGAGACAACCATGAAATTAAATAAAGAATTCCAATTTGAAATCTCAAAGCTCCGACACGAGGTTGAGGAGTTTGCCATGCAGTTTCCAACTATAGATATCTTCATTGTTAAGGTGGCTGGCTCCGACCCTCGAGCAAATATCCTTTCAAAATGA

Protein sequence

MYVWYKLVNIVVKEKKRRRNFRIGEDNHRRKPKAMFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEVVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGYQAMTPEYKAYQQQVLRNSSKLAQCLIEKGYELVSGGTDNHLVLIDLKNKVLEWVRIAANKNTVPGDVSAVIPADFAQVAEFFDEGVKLALKIKAAEPKGAKFKDFETTMKLNKEFQFEISKLRHEVEEFAMQFPTIDIFIVKVAGSDPRANILSK

Homology

[Close]

BLAST of CmoCh12G001400 vs. ExPASy Swiss-Prot
Match: Q94C74 (Serine hydroxymethyltransferase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SHM2 PE=1 SV=2)

HSP 1 Score: 320.1 bits (819), Expect = 3.3e-86
Identity = 203/506 (40.12%), Postives = 251/506 (49.60%), Query Frame = 0


Query: 34  AMFLRRVAVGATK-LNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPE 93
           A+ LRR++    K +++  +NG  L    S    + AE  ++R++W+KQLN  ++ + PE
Sbjct: 2   ALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDPE 61

Query: 94  VVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII 153
           V DIIE EKARQ+KG E+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ 
Sbjct: 62  VADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 121

Query: 154 ENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHG 213
           E  C +RAL+ F+LDP+KWGVNVQ+L+GS ANFQ YT LLKPHERIM+LDLPHGGHLSHG
Sbjct: 122 ETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHG 181

Query: 214 Y----------------------------------------------------------- 273
           Y                                                           
Sbjct: 182 YQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYA 241

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 242 RIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 301

Query: 334 --------------------------------------------QAMTPEYKAYQQQVLR 350
                                                       QA TPEYKAYQ QVLR
Sbjct: 302 LKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLR 361

[Close]

BLAST of CmoCh12G001400 vs. ExPASy Swiss-Prot
Match: P50433 (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 PE=2 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.1e-85
Identity = 202/505 (40.00%), Postives = 246/505 (48.71%), Query Frame = 0


Query: 34  AMFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEV 93
           A+ LRR++    K   +  NG  L    S    +  ++ ++   W KQLN P+EVV PE+
Sbjct: 4   AIALRRLSATVDKPVKSLYNGGSLYYMSSLPNEAVYDKEKSGVAWPKQLNAPLEVVDPEI 63

Query: 94  VDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIE 153
            DIIE EKARQ+KGLE+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ E
Sbjct: 64  ADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 123

Query: 154 NWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY 213
             C +RAL+ FRLDPAKWGVNVQ L+GS ANFQ YT LLKPHERIM+LDLPHGGHLSHGY
Sbjct: 124 TLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGY 183

Query: 214 ------------------------------------------------------------ 273
                                                                       
Sbjct: 184 QTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDR 243

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 244 IRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGV 303

Query: 334 -------------------------------------------QAMTPEYKAYQQQVLRN 350
                                                      QA TPEY+AYQ+QVL N
Sbjct: 304 KEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSN 363

[Close]

BLAST of CmoCh12G001400 vs. ExPASy Swiss-Prot
Match: P34899 (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum OX=3888 PE=1 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.2e-85
Identity = 200/505 (39.60%), Postives = 243/505 (48.12%), Query Frame = 0


Query: 34  AMFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEV 93
           AM LR+++    K +    +   L    S    +  ++   R TW KQLN P+EV+ PE+
Sbjct: 4   AMALRKLSSSVNKSSRPLFSASSLYYKSSLPDEAVYDKENPRVTWPKQLNSPLEVIDPEI 63

Query: 94  VDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIE 153
            DIIE EKARQ+KGLE+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ E
Sbjct: 64  ADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 123

Query: 154 NWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY 213
             C +RAL+ FRLDPAKWGVNVQ L+GS +NFQ YT LLKPH+RIM+LDLPHGGHLSHGY
Sbjct: 124 TLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGY 183

Query: 214 ------------------------------------------------------------ 273
                                                                       
Sbjct: 184 QTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYAR 243

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 244 IRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGL 303

Query: 334 -------------------------------------------QAMTPEYKAYQQQVLRN 350
                                                      QA TPEY+AYQ+QVL N
Sbjct: 304 KEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSN 363

[Close]

BLAST of CmoCh12G001400 vs. ExPASy Swiss-Prot
Match: Q9SZJ5 (Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SHM1 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.1e-84
Identity = 197/480 (41.04%), Postives = 236/480 (49.17%), Query Frame = 0


Query: 60  HMSSRYGSTAEERE-ARATWVKQLNDPMEVVAPEVVDIIEREKARQFKGLEVIASENFCS 119
           +MSS      +E+E +R TW KQLN P+E V PE+ DIIE EKARQ+KGLE+I SENF S
Sbjct: 28  YMSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTS 87

Query: 120 RAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIENWCMERALQVFRLDPAKWGVNVQTL 179
            +VM+A+GS+MTN  S+GYPGARY GG EY+D+ E  C +RAL+ FRLDP KWGVNVQ L
Sbjct: 88  VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPL 147

Query: 180 TGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY------------------------- 239
           +GS ANF  YT LLKPHERIM+LDLPHGGHLSHGY                         
Sbjct: 148 SGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST 207

Query: 240 ------------------------------------------------------------ 299
                                                                       
Sbjct: 208 GYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAA 267

Query: 300 ------------------------------------------------------------ 350
                                                                       
Sbjct: 268 NVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPG 327

[Close]

BLAST of CmoCh12G001400 vs. ExPASy Swiss-Prot
Match: P49357 (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei OX=4226 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.0e-82
Identity = 203/505 (40.20%), Postives = 241/505 (47.72%), Query Frame = 0


Query: 34  AMFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEV 93
           A+ LRR++  A K      NG  L    S    +  E+     TW KQLN P+EVV PE+
Sbjct: 4   ALALRRLSSSADKPLQRLFNGGHLYSMSSLPSEAVYEKERPGVTWPKQLNAPLEVVDPEI 63

Query: 94  VDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIE 153
            DIIE EKARQ+KGLE+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ E
Sbjct: 64  ADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAE 123

Query: 154 NWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY 213
             C +RAL+ FRLDPAKWGVNVQ L+GS ANF  YT LLK H+RIM+LDLPHGGHLSHGY
Sbjct: 124 TLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGY 183

Query: 214 ------------------------------------------------------------ 273
                                                                       
Sbjct: 184 QTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYAR 243

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 244 IRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGL 303

Query: 334 -------------------------------------------QAMTPEYKAYQQQVLRN 350
                                                      QA T EYKAYQ+QV+ N
Sbjct: 304 KEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTAEYKAYQEQVMSN 363

[Close]

BLAST of CmoCh12G001400 vs. ExPASy TrEMBL
Match: A0A6J1GIA3 (Glycine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454159 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 5.2e-151
Identity = 315/504 (62.50%), Postives = 315/504 (62.50%), Query Frame = 0


Query: 35  MFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEVV 94
           MFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEVV
Sbjct: 1   MFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEVV 60

Query: 95  DIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN 154
           DIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN
Sbjct: 61  DIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN 120

Query: 155 WCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY- 214
           WCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY 
Sbjct: 121 WCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGYQ 180

Query: 215 ------------------------------------------------------------ 274
                                                                       
Sbjct: 181 TATKKVSAVSLFFETMHYRLDEKTGYIDYDGMERSASLFRPKLIVAGASAYARLFDYARI 240

Query: 275 ------------------------------------------------------------ 334
                                                                       
Sbjct: 241 RKICDEHKAIMMADMAHLAGLVAADVIPSPFEYADIVTTTTNKSLRGPRGALIFYRKGVK 300

Query: 335 ------------------------------------------QAMTPEYKAYQQQVLRNS 350
                                                     QAMTPEYKAYQQQVLRNS
Sbjct: 301 EINKKGEEVLYDYEDKINNAVFPGVQGASHNQKLAGLAISLKQAMTPEYKAYQQQVLRNS 360

[Close]

BLAST of CmoCh12G001400 vs. ExPASy TrEMBL
Match: A0A6J1KK03 (Glycine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111495956 PE=3 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 5.6e-145
Identity = 304/504 (60.32%), Postives = 309/504 (61.31%), Query Frame = 0


Query: 35  MFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEVV 94
           MFLRRV VGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATW+KQLNDPMEVVAPEVV
Sbjct: 1   MFLRRVTVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWIKQLNDPMEVVAPEVV 60

Query: 95  DIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN 154
           DIIE EKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN
Sbjct: 61  DIIELEKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN 120

Query: 155 WCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY- 214
           WCMERAL+VFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPH+RIMSLDLPHGGHLSHGY 
Sbjct: 121 WCMERALEVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHDRIMSLDLPHGGHLSHGYQ 180

Query: 215 ------------------------------------------------------------ 274
                                                                       
Sbjct: 181 TATKKVSAVSLFFETMHYRLDEKTGYIDYDGMERSASLFRPKLIIAGASAYARLFDYARI 240

Query: 275 ------------------------------------------------------------ 334
                                                                       
Sbjct: 241 RKICDEHKAIMMADMAHLAGLVAADVIPSPFEYADIVTTTTNKSLRGPRGAMIFFRKGVK 300

Query: 335 ------------------------------------------QAMTPEYKAYQQQVLRNS 350
                                                     QAMTPEYKAYQQQVLRNS
Sbjct: 301 EINKKGEEVLYDYEDKINNAVFPGVQGASHNQKLAGLAISLKQAMTPEYKAYQQQVLRNS 360

[Close]

BLAST of CmoCh12G001400 vs. ExPASy TrEMBL
Match: A0A6J1KRZ7 (Glycine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111495956 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.8e-143
Identity = 300/504 (59.52%), Postives = 308/504 (61.11%), Query Frame = 0


Query: 35  MFLRRVAVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPEVV 94
           MFLRRV VGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATW+KQLNDPMEVVAPEVV
Sbjct: 1   MFLRRVTVGATKLNVAPANGRFLLRHMSSRYGSTAEEREARATWIKQLNDPMEVVAPEVV 60

Query: 95  DIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN 154
           DIIE EKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN
Sbjct: 61  DIIELEKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIEN 120

Query: 155 WCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY- 214
           WCMERAL+VFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPH+RIMSLDLPHGGHLSHGY 
Sbjct: 121 WCMERALEVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHDRIMSLDLPHGGHLSHGYQ 180

Query: 215 ------------------------------------------------------------ 274
                                                                       
Sbjct: 181 TATKKVSAVSLFFETMHYRLDEKTGYIDYDGMERSASLFRPKLIIAGASAYARLFDYARI 240

Query: 275 ------------------------------------------------------------ 334
                                                                       
Sbjct: 241 RKICDEHKAIMMADMAHLAGLVAADVIPSPFEYADIVTTTTNKSLRGPRGAMIFFRKGVK 300

Query: 335 ------------------------------------------QAMTPEYKAYQQQVLRNS 350
                                                     QAMTPEYKAYQQQVLRNS
Sbjct: 301 EINKKGEEVLYDYEDKINNAVFPGVQGASHNQKLAGLAISLKQAMTPEYKAYQQQVLRNS 360

[Close]

BLAST of CmoCh12G001400 vs. ExPASy TrEMBL
Match: A0A6J1GI73 (Glycine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454159 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 1.8e-143
Identity = 297/538 (55.20%), Postives = 318/538 (59.11%), Query Frame = 0


Query: 1   MYVWYKLVNIVVKEKKRRRNFRIGEDNHRRKPKAMFLRRVAVGATKLNVAPANGRFLLRH 60
           MYVWYKLVNIVVKEKKRRRNFRIGEDNHRRKPKAMFLRRVAVGATKLNVAPANGRFLLRH
Sbjct: 1   MYVWYKLVNIVVKEKKRRRNFRIGEDNHRRKPKAMFLRRVAVGATKLNVAPANGRFLLRH 60

Query: 61  MSSRYGSTAEEREARATWVKQLNDPMEVVAPEVVDIIEREKARQFKGLEVIASENFCSRA 120
           MSSRYGSTAEEREARATW+KQLN PMEV+AP+V DIIE EKARQF+GLE+I SENFC RA
Sbjct: 61  MSSRYGSTAEEREARATWIKQLNSPMEVIAPDVADIIELEKARQFQGLELIPSENFCPRA 120

Query: 121 VMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIENWCMERALQVFRLDPAKWGVNVQTLTG 180
           VMEA+GSI+TNS S+GYPGARY GGTEY DIIEN C +R  + FRLDPAKWGVNVQT TG
Sbjct: 121 VMEAVGSILTNSYSEGYPGARYYGGTEYADIIENLCKKRVFEAFRLDPAKWGVNVQTFTG 180

Query: 181 SIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY--------------------------- 240
           SIANF TY+ LLKPHERIMSLDLPHGGHLSHGY                           
Sbjct: 181 SIANFLTYSALLKPHERIMSLDLPHGGHLSHGYQTATKKVSLVSMFFETMPYRLDERTGY 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 IDYDGMERSASLFRPKLIVAGATAYARLYDYARIRKICDKYKAIMMADMAHLAGLVAADV 300

Query: 301 ------------------------------------------------------------ 350
                                                                       
Sbjct: 301 IPSPFEYADIVTTTTNKSLGGPRGALIFYRKGVKEINKKGEEVLYDYEDKINGAVFPGFQ 360

[Close]

BLAST of CmoCh12G001400 vs. ExPASy TrEMBL
Match: A0A6J1KMI2 (Glycine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111495956 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 3.0e-138
Identity = 297/506 (58.70%), Postives = 304/506 (60.08%), Query Frame = 0


Query: 34  AMFLRRVAVGATKLNVAPANGRFLLRH-MSSRYGSTAEEREARATWVKQLNDPMEVVAPE 93
           AM LRRVAVG TK NV+P NGRFLLR+  SS  GSTAEEREARATW+KQLNDPMEVVAPE
Sbjct: 2   AMLLRRVAVGITKPNVSPVNGRFLLRNTASSTGGSTAEEREARATWIKQLNDPMEVVAPE 61

Query: 94  VVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII 153
           VVDIIE EKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII
Sbjct: 62  VVDIIELEKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII 121

Query: 154 ENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHG 213
           ENWCMERAL+VFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPH+RIMSLDLPHGGHLSHG
Sbjct: 122 ENWCMERALEVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHDRIMSLDLPHGGHLSHG 181

Query: 214 Y----------------------------------------------------------- 273
           Y                                                           
Sbjct: 182 YQTATKKVSAVSLFFETMHYRLDEKTGYIDYDGMERSASLFRPKLIIAGASAYARLFDYA 241

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 242 RIRKICDEHKAIMMADMAHLAGLVAADVIPSPFEYADIVTTTTNKSLRGPRGAMIFFRKG 301

Query: 334 --------------------------------------------QAMTPEYKAYQQQVLR 350
                                                       QAMTPEYKAYQQQVLR
Sbjct: 302 VKEINKKGEEVLYDYEDKINNAVFPGVQGASHNQKLAGLAISLKQAMTPEYKAYQQQVLR 361

[Close]

BLAST of CmoCh12G001400 vs. TAIR 10
Match: AT5G26780.1 (serine hydroxymethyltransferase 2 )

HSP 1 Score: 320.1 bits (819), Expect = 2.3e-87
Identity = 203/506 (40.12%), Postives = 251/506 (49.60%), Query Frame = 0


Query: 34  AMFLRRVAVGATK-LNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPE 93
           A+ LRR++    K +++  +NG  L    S    + AE  ++R++W+KQLN  ++ + PE
Sbjct: 2   ALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDPE 61

Query: 94  VVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII 153
           V DIIE EKARQ+KG E+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ 
Sbjct: 62  VADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 121

Query: 154 ENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHG 213
           E  C +RAL+ F+LDP+KWGVNVQ+L+GS ANFQ YT LLKPHERIM+LDLPHGGHLSHG
Sbjct: 122 ETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHG 181

Query: 214 Y----------------------------------------------------------- 273
           Y                                                           
Sbjct: 182 YQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYA 241

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 242 RIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 301

Query: 334 --------------------------------------------QAMTPEYKAYQQQVLR 350
                                                       QA TPEYKAYQ QVLR
Sbjct: 302 LKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLR 361

[Close]

BLAST of CmoCh12G001400 vs. TAIR 10
Match: AT4G37930.1 (serine transhydroxymethyltransferase 1 )

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-85
Identity = 197/480 (41.04%), Postives = 236/480 (49.17%), Query Frame = 0


Query: 60  HMSSRYGSTAEERE-ARATWVKQLNDPMEVVAPEVVDIIEREKARQFKGLEVIASENFCS 119
           +MSS      +E+E +R TW KQLN P+E V PE+ DIIE EKARQ+KGLE+I SENF S
Sbjct: 28  YMSSLPSEAVDEKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTS 87

Query: 120 RAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDIIENWCMERALQVFRLDPAKWGVNVQTL 179
            +VM+A+GS+MTN  S+GYPGARY GG EY+D+ E  C +RAL+ FRLDP KWGVNVQ L
Sbjct: 88  VSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPL 147

Query: 180 TGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHGY------------------------- 239
           +GS ANF  YT LLKPHERIM+LDLPHGGHLSHGY                         
Sbjct: 148 SGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDEST 207

Query: 240 ------------------------------------------------------------ 299
                                                                       
Sbjct: 208 GYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAA 267

Query: 300 ------------------------------------------------------------ 350
                                                                       
Sbjct: 268 NVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDFEDKINQAVFPG 327

[Close]

BLAST of CmoCh12G001400 vs. TAIR 10
Match: AT5G26780.3 (serine hydroxymethyltransferase 2 )

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-84
Identity = 204/522 (39.08%), Postives = 251/522 (48.08%), Query Frame = 0


Query: 34  AMFLRRVAVGATK-LNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPE 93
           A+ LRR++    K +++  +NG  L    S    + AE  ++R++W+KQLN  ++ + PE
Sbjct: 2   ALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDPE 61

Query: 94  VVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII 153
           V DIIE EKARQ+KG E+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ 
Sbjct: 62  VADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 121

Query: 154 ENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHG 213
           E  C +RAL+ F+LDP+KWGVNVQ+L+GS ANFQ YT LLKPHERIM+LDLPHGGHLSHG
Sbjct: 122 ETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHG 181

Query: 214 Y----------------------------------------------------------- 273
           Y                                                           
Sbjct: 182 YQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYA 241

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 242 RIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 301

Query: 334 --------------------------------------------QAMTPEYKAYQQQVLR 350
                                                       QA TPEYKAYQ QVLR
Sbjct: 302 LKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLR 361

[Close]

BLAST of CmoCh12G001400 vs. TAIR 10
Match: AT5G26780.2 (serine hydroxymethyltransferase 2 )

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-84
Identity = 204/522 (39.08%), Postives = 251/522 (48.08%), Query Frame = 0


Query: 34  AMFLRRVAVGATK-LNVAPANGRFLLRHMSSRYGSTAEEREARATWVKQLNDPMEVVAPE 93
           A+ LRR++    K +++  +NG  L    S    + AE  ++R++W+KQLN  ++ + PE
Sbjct: 2   ALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDPE 61

Query: 94  VVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEYLDII 153
           V DIIE EKARQ+KG E+I SENF S +VM+A+GS+MTN  S+GYPGARY GG EY+D+ 
Sbjct: 62  VADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 121

Query: 154 ENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGHLSHG 213
           E  C +RAL+ F+LDP+KWGVNVQ+L+GS ANFQ YT LLKPHERIM+LDLPHGGHLSHG
Sbjct: 122 ETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHG 181

Query: 214 Y----------------------------------------------------------- 273
           Y                                                           
Sbjct: 182 YQTDTKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYA 241

Query: 274 ------------------------------------------------------------ 333
                                                                       
Sbjct: 242 RIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRKG 301

Query: 334 --------------------------------------------QAMTPEYKAYQQQVLR 350
                                                       QA TPEYKAYQ QVLR
Sbjct: 302 LKEINKQGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQARTPEYKAYQDQVLR 361

[Close]

BLAST of CmoCh12G001400 vs. TAIR 10
Match: AT4G32520.1 (serine hydroxymethyltransferase 3 )

HSP 1 Score: 212.2 bits (539), Expect = 6.9e-55
Identity = 146/442 (33.03%), Postives = 187/442 (42.31%), Query Frame = 0


Query: 89  VAPEVVDIIEREKARQFKGLEVIASENFCSRAVMEAIGSIMTNSSSDGYPGARYSGGTEY 148
           V PEV  II +EK RQF+ LE+IASENF SRAVMEA+GS +TN  S+G PG RY GG EY
Sbjct: 86  VDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEY 145

Query: 149 LDIIENWCMERALQVFRLDPAKWGVNVQTLTGSIANFQTYTGLLKPHERIMSLDLPHGGH 208
           +D +E  C  RAL  FRLD  KWGVNVQ L+GS ANF  YT +L PH+RIM LDLPHGGH
Sbjct: 146 IDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMGLDLPHGGH 205

Query: 209 LSHGY------------------------------------------------------- 268
           LSHG+                                                       
Sbjct: 206 LSHGFMTAKRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASAYSRD 265

Query: 269 ------------------------------------------------------------ 328
                                                                       
Sbjct: 266 FDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMIF 325

Query: 329 ----------------------------------------QAMTPEYKAYQQQVLRNSSK 348
                                                    A +PE+KAYQ++V+ N   
Sbjct: 326 FRKDPINGVDLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAYQKRVVSNCRA 385

The following BLAST results are available for this feature:

BLAST of CmoCh12G001400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94C74	3.3e-86	40.12	Serine hydroxymethyltransferase 2, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
P50433	2.1e-85	40.00	Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum OX=4113 PE=2...	[more]
P34899	6.2e-85	39.60	Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum OX=3888 PE=1 SV=...	[more]
Q9SZJ5	3.1e-84	41.04	Serine hydroxymethyltransferase 1, mitochondrial OS=Arabidopsis thaliana OX=3702...	[more]
P49357	1.0e-82	40.20	Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei OX=4226 PE...	[more]

BLAST of CmoCh12G001400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GIA3	5.2e-151	62.50	Glycine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454159 P...	[more]
A0A6J1KK03	5.6e-145	60.32	Glycine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111495956 PE=...	[more]
A0A6J1KRZ7	1.8e-143	59.52	Glycine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111495956 PE=...	[more]
A0A6J1GI73	1.8e-143	55.20	Glycine hydroxymethyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111454159 P...	[more]
A0A6J1KMI2	3.0e-138	58.70	Glycine hydroxymethyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111495956 PE=...	[more]

BLAST of CmoCh12G001400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26780.1	2.3e-87	40.12	serine hydroxymethyltransferase 2	[more]
AT4G37930.1	2.2e-85	41.04	serine transhydroxymethyltransferase 1	[more]
AT5G26780.3	1.4e-84	39.08	serine hydroxymethyltransferase 2	[more]
AT5G26780.2	1.4e-84	39.08	serine hydroxymethyltransferase 2	[more]
AT4G32520.1	6.9e-55	33.03	serine hydroxymethyltransferase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039429	Serine hydroxymethyltransferase-like domain	PFAM	PF00464	SHMT	coord: 89..214 e-value: 3.2E-55 score: 187.3
IPR015422	Pyridoxal phosphate-dependent transferase, small domain	GENE3D	3.90.1150.10	Aspartate Aminotransferase, domain 1	coord: 285..351 e-value: 2.1E-10 score: 42.2 coord: 214..284 e-value: 2.1E-21 score: 78.0 coord: 91..114 e-value: 1.5E-55 score: 190.3
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 115..213 e-value: 1.5E-55 score: 190.3
None	No IPR available	PANTHER	PTHR11680:SF49	SERINE HYDROXYMETHYLTRANSFERASE	coord: 36..216 coord: 214..350
IPR001085	Serine hydroxymethyltransferase	PANTHER	PTHR11680	SERINE HYDROXYMETHYLTRANSFERASE	coord: 36..216 coord: 214..350
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 214..350
IPR015424	Pyridoxal phosphate-dependent transferase	SUPERFAMILY	53383	PLP-dependent transferases	coord: 77..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G001400.1	CmoCh12G001400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019264	glycine biosynthetic process from serine
biological_process	GO:0035999	tetrahydrofolate interconversion
molecular_function	GO:0004372	glycine hydroxymethyltransferase activity
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003824	catalytic activity