CmoCh12G001230 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGAGAGAGTGAGAGAGATGACAGACGGTCTTCCTTTCCAAAGCAAGCAGTGCTTCAGTGCGCACCGCCTTCGTTTCGTTATCTTTAGGTTCGGTCCACCCACCTTCAATGGCCATTAACCCTCGATTTCCCTTTTAGAATTCGCTTCCTCTCAACAAAAATTCGCTTCTTCTCCCCCATCAGATCCTCCCATTCTCGCCGCTCGATCTCGTTTCTCGCCATTAAAATGCGCTTCTCTGATTTCCGCCCTCCGTTGCCTCTTTGATTCCGTTTTTTTTTTTGTTTTTCCTTCTCCATTTCTCTAATTTTGTGATTATTATGAGGATCGGGTTCTGCGTGAGGGGAATTGTTCTGTTGATCGTGATGCTGGGAAGGCAAGCGTCGTCCGCCGACTCGGTTAGGGTTTTGCATTCAGGCCTTTCGTGTCCTATTGAATCTTTTCTGGATACGATCTTTCGTTTTAGGGATTGGAACTCGTACTGCCCCATTGACGGACAGCATGGACACTATGAATTCATTGGCGTTTCTGAGGTAAATTTCTTATTATTTTTCCATTTCTGTTTCTATGATTCGTCTGAAATTGTTTGTCGTTAAGATCCTTGACGTTTGAGGGTCTCTTTTGTTTAATTTTGGTCCAAGTTTTGTGGTCAATTTCAGCTTTTTCAGAATATTGAGACATGTTTTCTGGCTCTGTAGTCAATTTTGTTGATGTTAATTTGTTTGGGAGCCCCCTTAACTGTTTAAGGGTTTGAGTTCTACGGATCCTAAGCATTTTGGGCTCTGTTTTTGAGTTCATTTCTGTTATCTTTGTTGTTTTGCCACTAAAAGAATTGGGAATTCTGATCTTTACATGAATTTGGGTATAGGAGGCTGTTATAATTGTGTGGGTAACTTAACTATTTGTTTTTGCTATGATTTAAGGGAGATGAGGCCTCCTTACAAATGGCACTGAATATGGTACATAAGAACCGCTATGAATATGTTGCAGTGCTCTTCTATGCATCTTGGTGCCAGTTCTCCAAGTCTTTTAGGCCAAGCTTTTCGATACTATCGTCTTTATACCCTTCGATCCCGCATTTTGCAATCCAAGAATCAGCTGTTAGGCCAAGGTTTCATATTGAACTTTCACTTCTTCAATTTGGCATTCTATGGTCGTATCATGTTTACTTTATGTGAACATAATTCATGTTTTCTTGCAGCATACTCTCTAAGTATGGGGTCCATGGTTTTCCTACCCTTTTCCTTTTAAATTCTACAATGCGTGCTCGCTACTACGGTTCTCGAACGCTCCCTTCTCTTGCTGCATTCTATAATGATGTTACTGGTATGGTCTCTTTATGCTTCCTCTAAATTTTGCTTCCATGAAAGGAATACTTGTTTTGAATTCTTAAGAAGAACTGAAATTGTGTAGCATTTTTTGCCTAAGAGATACTCAAATTGCTCAAAATCAATTTAGGTTGCTGATAATATTTTCTATCTTGTGTGAATTCAATTAAAGCGCTGAATCTTGATTCTTGAACATCTTCTCTTTGCATAATCGATTTGTAATGGAGTTTCGTGTTTTTTAGTTTGTCATGTAATAGGTTTTTTTTTTTCTGAGTCTTATTATTTGTTTTAGTCATGTGCTGTTTTGAGGCCCCCTTCATCGTAGGACATCGACATATTGGATGAACCAGGGAAGCTTTAACAAGTAGCGCTTTAACAAGTAGCTACGAACCCCGACGAATAGTGCAAGTGGTTGAAGACATTAATGTTGGTTTAATATGCAGTAATAGTATTTGAATATGTGATGAAGAATCTTAACAGTTATATTGTTAGAACTTAGTTCTATTATTTGATATTGGTGGTCATGGTTGATTATAGGCATTCAAACTGCATCACTGGACCAAATATCGCCAGATAGAATCGAACAAGTATGGAATCAGGAGAAGCATGATGATAGCAGTGAGCAGGAAAATTGCCCATTCTCATGGGCAAGGTCTCCCGAAAATCTACTTCGGGAAGAAACGTATTTGGCTCTAGCTACTGCGTTTGTGTTTATGAGATTGATATACATCTTCTTTCCAACTCTTTTGGTCTATGCTCAATATGTTTGGCAAAGGCACCTTAGGAACCTGAGATTGGGAACCTTGTGGGAACGACCTTTGACGTGCCTGAAAGGAGCAGTTCAGTTATTTAGCCATTTCAAGGATCCTTGCAAGAGAAGCAATTTACAAGGAGGTGCCATGAATGCCAGGGCATGGGCCAAGTCTTTTGCCACAGTTTCTATAGGCGATGCAAGCTCTAGTAGCAGAGTGTGCCAGTAAGAATGTTGTCGATGTGCATCAACGACATGGTGAGCTGTAGAAATTTCCATTCTAGAGCCTCGAGTAGCTTTTGGGTTCGACATCTTGTGAACGACGACGAAGGTAAAGCAAGGATACTCGTCCTAATCCATTTATTTTTTATTTTTTCTTGTTGTAGAATGTTAGTTCAAAATTTGTTACGCATTTTCAAACGATGCCTGAACCCAATTTGTGCATAGGAATAACCAACAGACTTTCCCTCCCTTATGTGTAACTTCTTGCTATTGCGACTGCAAATGCCCCCACAATCATCTATGGTAGGTTCTAAATTAGTGTTCATTCTATTCTTTTTCTTTTCAACTTTGAACTGCTAACTGGAAGTTGTTGTGTCCAAAACCTTATGTTCGTAACATCGTGCAACGAATTCGATCTCAAATGCCATAGACAAACGGTGAGACCAAATTGGTTGATCCTTTTAAAGGAATAGCAACTTCCCCTAGCCGACTCGAATCAGGTCAGACAACCAATTCCTAGCTACTTTCACTAGCTATATTGAGGATAGACTTCAATTCGACAGTAATTTGCCCCAAGTGAATGCTTCTATGATGCAATTTAATAAAGCAATTGTGACACTCGAGTAAGAGAAAGATGAGTAAAGAGAAAGATGGGCATAGAGCTAGATGTGTAATTGAAGAATGTGTAATTGAAGAATGAACGTGATGGGCTCTTACCCCAACTCACCTAAAATATTAAATAGCAG GCGAGAGAGTGAGAGAGATGACAGACGGTCTTCCTTTCCAAAGCAAGCAGTGCTTCAGTGCGCACCGCCTTCGTTTCGTTATCTTTAGGTTCGGTCCACCCACCTTCAATGGCCATTAACCCTCGATTTCCCTTTTAGAATTCGCTTCCTCTCAACAAAAATTCGCTTCTTCTCCCCCATCAGATCCTCCCATTCTCGCCGCTCGATCTCGTTTCTCGCCATTAAAATGCGCTTCTCTGATTTCCGCCCTCCGTTGCCTCTTTGATTCCGTTTTTTTTTTTGTTTTTCCTTCTCCATTTCTCTAATTTTGTGATTATTATGAGGATCGGGTTCTGCGTGAGGGGAATTGTTCTGTTGATCGTGATGCTGGGAAGGCAAGCGTCGTCCGCCGACTCGGTTAGGGTTTTGCATTCAGGCCTTTCGTGTCCTATTGAATCTTTTCTGGATACGATCTTTCGTTTTAGGGATTGGAACTCGTACTGCCCCATTGACGGACAGCATGGACACTATGAATTCATTGGCGTTTCTGAGGGAGATGAGGCCTCCTTACAAATGGCACTGAATATGGTACATAAGAACCGCTATGAATATGTTGCAGTGCTCTTCTATGCATCTTGGTGCCAGTTCTCCAAGTCTTTTAGGCCAAGCTTTTCGATACTATCGTCTTTATACCCTTCGATCCCGCATTTTGCAATCCAAGAATCAGCTGTTAGGCCAAGCATACTCTCTAAGTATGGGGTCCATGGTTTTCCTACCCTTTTCCTTTTAAATTCTACAATGCGTGCTCGCTACTACGGTTCTCGAACGCTCCCTTCTCTTGCTGCATTCTATAATGATGTTACTGGCATTCAAACTGCATCACTGGACCAAATATCGCCAGATAGAATCGAACAAGTATGGAATCAGGAGAAGCATGATGATAGCAGTGAGCAGGAAAATTGCCCATTCTCATGGGCAAGGTCTCCCGAAAATCTACTTCGGGAAGAAACGTATTTGGCTCTAGCTACTGCGTTTGTGTTTATGAGATTGATATACATCTTCTTTCCAACTCTTTTGGTCTATGCTCAATATGTTTGGCAAAGGCACCTTAGGAACCTGAGATTGGGAACCTTGTGGGAACGACCTTTGACGTGCCTGAAAGGAGCAGTTCAGTTATTTAGCCATTTCAAGGATCCTTGCAAGAGAAGCAATTTACAAGGAGGTGCCATGAATGCCAGGGCATGGGCCAAGTCTTTTGCCACAGTTTCTATAGGCGATGCAAGCTCTAGTAGCAGAGTGTGCCAGTAAGAATGTTGTCGATGTGCATCAACGACATGGTGAGCTGTAGAAATTTCCATTCTAGAGCCTCGAGTAGCTTTTGGGTTCGACATCTTGTGAACGACGACGAAGGTAAAGCAAGGATACTCGTCCTAATCCATTTATTTTTTATTTTTTCTTGTTGTAGAATGTTAGTTCAAAATTTGTTACGCATTTTCAAACGATGCCTGAACCCAATTTGTGCATAGGAATAACCAACAGACTTTCCCTCCCTTATGTGTAACTTCTTGCTATTGCGACTGCAAATGCCCCCACAATCATCTATGGTAGGTTCTAAATTAGTGTTCATTCTATTCTTTTTCTTTTCAACTTTGAACTGCTAACTGGAAGTTGTTGTGTCCAAAACCTTATGTTCGTAACATCGTGCAACGAATTCGATCTCAAATGCCATAGACAAACGGTGAGACCAAATTGGTTGATCCTTTTAAAGGAATAGCAACTTCCCCTAGCCGACTCGAATCAGGTCAGACAACCAATTCCTAGCTACTTTCACTAGCTATATTGAGGATAGACTTCAATTCGACAGTAATTTGCCCCAAGTGAATGCTTCTATGATGCAATTTAATAAAGCAATTGTGACACTCGAGTAAGAGAAAGATGAGTAAAGAGAAAGATGGGCATAGAGCTAGATGTGTAATTGAAGAATGTGTAATTGAAGAATGAACGTGATGGGCTCTTACCCCAACTCACCTAAAATATTAAATAGCAG ATGAGGATCGGGTTCTGCGTGAGGGGAATTGTTCTGTTGATCGTGATGCTGGGAAGGCAAGCGTCGTCCGCCGACTCGGTTAGGGTTTTGCATTCAGGCCTTTCGTGTCCTATTGAATCTTTTCTGGATACGATCTTTCGTTTTAGGGATTGGAACTCGTACTGCCCCATTGACGGACAGCATGGACACTATGAATTCATTGGCGTTTCTGAGGGAGATGAGGCCTCCTTACAAATGGCACTGAATATGGTACATAAGAACCGCTATGAATATGTTGCAGTGCTCTTCTATGCATCTTGGTGCCAGTTCTCCAAGTCTTTTAGGCCAAGCTTTTCGATACTATCGTCTTTATACCCTTCGATCCCGCATTTTGCAATCCAAGAATCAGCTGTTAGGCCAAGCATACTCTCTAAGTATGGGGTCCATGGTTTTCCTACCCTTTTCCTTTTAAATTCTACAATGCGTGCTCGCTACTACGGTTCTCGAACGCTCCCTTCTCTTGCTGCATTCTATAATGATGTTACTGGCATTCAAACTGCATCACTGGACCAAATATCGCCAGATAGAATCGAACAAGTATGGAATCAGGAGAAGCATGATGATAGCAGTGAGCAGGAAAATTGCCCATTCTCATGGGCAAGGTCTCCCGAAAATCTACTTCGGGAAGAAACGTATTTGGCTCTAGCTACTGCGTTTGTGTTTATGAGATTGATATACATCTTCTTTCCAACTCTTTTGGTCTATGCTCAATATGTTTGGCAAAGGCACCTTAGGAACCTGAGATTGGGAACCTTGTGGGAACGACCTTTGACGTGCCTGAAAGGAGCAGTTCAGTTATTTAGCCATTTCAAGGATCCTTGCAAGAGAAGCAATTTACAAGGAGGTGCCATGAATGCCAGGGCATGGGCCAAGTCTTTTGCCACAGTTTCTATAGGCGATGCAAGCTCTAGTAGCAGAGTGTGCCAGTAA MRIGFCVRGIVLLIVMLGRQASSADSVRVLHSGLSCPIESFLDTIFRFRDWNSYCPIDGQHGHYEFIGVSEGDEASLQMALNMVHKNRYEYVAVLFYASWCQFSKSFRPSFSILSSLYPSIPHFAIQESAVRPSILSKYGVHGFPTLFLLNSTMRARYYGSRTLPSLAAFYNDVTGIQTASLDQISPDRIEQVWNQEKHDDSSEQENCPFSWARSPENLLREETYLALATAFVFMRLIYIFFPTLLVYAQYVWQRHLRNLRLGTLWERPLTCLKGAVQLFSHFKDPCKRSNLQGGAMNARAWAKSFATVSIGDASSSSRVCQ Homology
BLAST of CmoCh12G001230 vs. ExPASy Swiss-Prot
Match: Q9SA00 (5'-adenylylsulfate reductase-like 4 OS=Arabidopsis thaliana OX=3702 GN=APRL4 PE=2 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 3.2e-85 Identity = 175/313 (55.91%), Postives = 230/313 (73.48%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy Swiss-Prot
Match: Q9ZPE9 (5'-adenylylsulfate reductase-like 6 OS=Arabidopsis thaliana OX=3702 GN=APRL6 PE=2 SV=2) HSP 1 Score: 255.8 bits (652), Expect = 6.7e-67 Identity = 156/313 (49.84%), Postives = 206/313 (65.81%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy Swiss-Prot
Match: Q84P95 (5'-adenylylsulfate reductase-like 3 OS=Oryza sativa subsp. japonica OX=39947 GN=APRL3 PE=2 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.7e-65 Identity = 134/254 (52.76%), Postives = 179/254 (70.47%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy Swiss-Prot
Match: Q67VZ8 (5'-adenylylsulfate reductase-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=APRL2 PE=2 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 9.4e-53 Identity = 118/252 (46.83%), Postives = 163/252 (64.68%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy Swiss-Prot
Match: Q5DJV7 (5'-adenylylsulfate reductase-like 4 OS=Oryza sativa subsp. japonica OX=39947 GN=APRL4 PE=2 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.9e-51 Identity = 106/210 (50.48%), Postives = 143/210 (68.10%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy TrEMBL
Match: A0A6J1GJ31 (5'-adenylylsulfate reductase-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111454725 PE=4 SV=1) HSP 1 Score: 649.4 bits (1674), Expect = 7.7e-183 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy TrEMBL
Match: A0A6J1KK57 (5'-adenylylsulfate reductase-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111496455 PE=4 SV=1) HSP 1 Score: 644.4 bits (1661), Expect = 2.5e-181 Identity = 319/322 (99.07%), Postives = 320/322 (99.38%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy TrEMBL
Match: A0A6J1BQ26 (5'-adenylylsulfate reductase-like 4 OS=Momordica charantia OX=3673 GN=LOC111004770 PE=4 SV=1) HSP 1 Score: 571.6 bits (1472), Expect = 2.0e-159 Identity = 285/322 (88.51%), Postives = 299/322 (92.86%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy TrEMBL
Match: A0A6J1K6W8 (5'-adenylylsulfate reductase-like 4 OS=Cucurbita maxima OX=3661 GN=LOC111492185 PE=4 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 6.3e-153 Identity = 272/316 (86.08%), Postives = 288/316 (91.14%), Query Frame = 0
BLAST of CmoCh12G001230 vs. ExPASy TrEMBL
Match: A0A6J1HDE0 (5'-adenylylsulfate reductase-like 4 OS=Cucurbita moschata OX=3662 GN=LOC111462583 PE=4 SV=1) HSP 1 Score: 543.1 bits (1398), Expect = 7.8e-151 Identity = 267/316 (84.49%), Postives = 287/316 (90.82%), Query Frame = 0
BLAST of CmoCh12G001230 vs. TAIR 10
Match: AT1G34780.1 (APR-like 4 ) HSP 1 Score: 316.6 bits (810), Expect = 2.3e-86 Identity = 175/313 (55.91%), Postives = 230/313 (73.48%), Query Frame = 0
BLAST of CmoCh12G001230 vs. TAIR 10
Match: AT1G34780.2 (APR-like 4 ) HSP 1 Score: 256.5 bits (654), Expect = 2.8e-68 Identity = 155/313 (49.52%), Postives = 203/313 (64.86%), Query Frame = 0
BLAST of CmoCh12G001230 vs. TAIR 10
Match: AT4G08930.1 (APR-like 6 ) HSP 1 Score: 255.8 bits (652), Expect = 4.8e-68 Identity = 156/313 (49.84%), Postives = 206/313 (65.81%), Query Frame = 0
BLAST of CmoCh12G001230 vs. TAIR 10
Match: AT3G03860.1 (APR-like 5 ) HSP 1 Score: 130.2 bits (326), Expect = 3.0e-30 Identity = 86/261 (32.95%), Postives = 132/261 (50.57%), Query Frame = 0
BLAST of CmoCh12G001230 vs. TAIR 10
Match: AT5G18120.1 (APR-like 7 ) HSP 1 Score: 111.3 bits (277), Expect = 1.5e-24 Identity = 82/263 (31.18%), Postives = 129/263 (49.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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