CmoCh12G001080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh12G001080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	3'-5' exoribonuclease 1-like
Location	Cmo_Chr12: 620399 .. 626135 (+)
RNA-Seq Expression	CmoCh12G001080
Synteny	CmoCh12G001080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCGATTCTTCCTTCCAAACTGCTTCCCTCCTCTCTCCCGGCTCACCTTCCAGATCACACAGGTCTCTCTCTTCCCCGTTTTCAGTTTTCCTTTGATTTTCCATTTATTATGAGTATATATGGCAGCTCCTCGGGTATATTTGTTCTTATCATCGGGCTTCTTCAGGAGCGGATTTCAGAGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTTCTCAAGATCATGATGGCCCTTGAACGCAAAGGTGCTTGTTTGCTCTGGTTTCGTTATTTGAACTGTTTAAGTTTTCTCTCAACTGGTATTTGTTTCTTTTTTTGATCCAATCAATATGAATTTGTGCTGATTTAGTCGCATTCTCTTCCTCCTGCTCGAGGGGGATTCTGCGACTTTGTTTTGTTCATTTCCAAGTGATACTGAGAACTAGTAACTCTAATTCTGTATAGAGTTGTTGTTGTTATTATTTTGAGCTGAGGGTAGTTCTATTGGGAAATCGAGGAGTCAAGTGAAGAATTGATATGGACATTGCCCTTTTGAGTTGACGTTAGTTCTTGTTGCTTTTTTTCGTTATGGAATTTTGAGATCGATATTGATATAATAACACATGTATTTACAGAGTGGGTTTATGAGCACCATACTTCATAGTATCTAGGAGTTTAGATGCCAAGAGCCATTAGTCAGAACTCTTGTACTTCAACGCTTCTTTAACATTTAAAGCATTAAAGTTCGAAGGGTAGGGACTTTGTTAACTGAGAATGATCGTCTGGGTTTTTCTTCTGTGGGTTTTTCTTCTGTTTCTTTTAGGTAATTTGAATCTTAGACAGAAAATTTGAATCGAGGTTTTATTAGCTAGTTTGGAATTGAATCACCGGTGGTTCAACAGGCGTGGAATGTAATTTTAACCAACTGACTAGCACGGCTCTTTATAATTAGGTGATTCTTGCTATGGTGACATTATTAAGAGGACTTATATGAAGCAATTAACAATTATTGAATGTTAAAGATCTTCAATTTTAAAGTTAGCTACTTCAAGAGGCATGATCTCTCTACCTCTTCCGGCCGATCATCCATCTTACCTCTAGCAGCTTTTTGAATTCTTATAGTAGTTGGGAATGAAGGGTACCAGGGCTCTAGTTTAAGATAGATTATACATGTATGAAGTATCATTTGTCACTATCTCTTTTTTAAAAAAATTACATTCCTGTTGTGTGGAGTCTGTTAAGATCTCTTATGGACGTGCCGTTGTTTCTTTTGGAGGAGATAAGTAAAGTGGTTTTTAGGTTTGCAAGAGATAAGTCCCTAATGCCCTGATGGTTTCTCCATGGAGGTAATTGTGAGGGCATTAAAGAGGATTTTTTGAATGGCAATTTCTGAATTTTATGCGTGCGCGCAGGTGGGTTTTAGATGCCTTAATAAATGAAACTTATGTTTGTCTCATCCCAAAGAAAAATGCAAAACATGATCAAGGACTTTAGGTTGATTAGTGTTGTTATAAGTTTATATAAGATGATAGCGAAGACCTTGGCTGAGGTTTGAGAATTCTTTCTAGTGCAACTCGAAGTTTTCAGGAGATTTTAGTGGGGGAGGAAAATTTTAGACCATTTGCTCATCACTAACGATACCATCAAGGACTTTAGGAGGAAGAACTAATGCAACTCGAAATCTTTTATGTGGCTACAGGTCTCTTGATTTATGCCAATTCAAATGCTAACCTCCACAAGTGGTTGGGATTCTGGCTGCTTTTTTGTGCTTTTCATGTATAAATAAACTATTAGTTTCCTTCTTTAAAAAGATCACCCCGTTGCTTGTACAGTTTTGAGAGCATTTTTGCAACACCCTTGGTTTGAGGTTTTCCATTTTATATATCTTATTATTTTAAGAAAATGTTTAATATCCTATTAGATAGCTTTGGGTTTCAGTTTATTCTCATTTTCCCTCTCTCTATTAGCATTTCCAAGTTTCTTGTTCCTTCCTTTCTGATTTCCTTCCCATGACATCCTTTTTCTATTCCTGTATTTTCTTCCCCGTCCTCCTGATTTCCTCACCTTGTTTTCTTGTCAGCCATCCTTTTCAAATTTTCCCTTGTTGTGCTGTGGATGAGCAACAATGATCGAGTATGCAACTTCCAATTTTGTTGATGAGAACCGGTGTTATCTGCCCCGTAGAGATTTTCTTAGATAAATGTCAGAATTTTCATTACTGAGGAAACAATACCAGAGGTGGAAAGCAATTTTTAGAGTTCTCTACGATATTGCTATCCTGTAAGCCTCCCTTGACTTTATGTTGCTGAAATGACATCTTTTGAATCAGTATGAATCTGCCAGTCGCAAGAAATGGTAATAGTTTTACCTCTTTTATTCCTGGTTGCAATCCGGTAATTTCTCTTCCAATTGAAACTTTGACCTTTTATGAGACATTAAGTGGTTAAATAATAACTAAAACCTAAAAACTTAAATTGATAGATTACAACGAATTTAATATTTTTATCAATATTTTGATAGTTTCTCTCACTTGTGAAATTGAAAATTTATGAAATGCCTAACAAGTGAAACCAATATTAATTTGGAAAGAAATGGCAATACTTTGATATTATATCAAATATCAAATTACCAAATACCACTGGACAAAAAAGATTTAGTTGATCAGTTATAGTAAATTAAATATTTTTTAGTGCGATATCTATCTTTGTTTTCCTCCAGGAACACCTATGGTCTTCTAAATGTTTAACTTTATATCTTTATTGGATATTGTTTTAGCCATATTGACTAGAGAAACCTTCTATGTTCTCTATACAATATTTAATCCAAAATCATTTTAATTTCTTTTGCTTCTTTGTTTGCAGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTCTGCAACATAGTGGAAATTCTGTTGATGGTTTCCAAGAACGTACGGATGAAATCAGTTGTTATAGCAGGAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTTATTGAACGTCCAAATGAATTTCACAACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCTGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATTTTCGGCTGCAAGAGTTTCAATATTTTGTGGTTATAGACTTTGAAGCAACATGTGACAAGGATAAAAATCCCCATCCTCAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTCGAAGCTTGCTTTCAAACGTATGTGCGCCCAACTTGCAATCAGCTCTTAAGCGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTTTGTTTGAAGCTTAGCTTGTTTTTCTTCAAAGAAAATAATTACGCTTGGAGGTTGCATCTTGCTGGCATGGAACAAACTTGGTGGTGTGATTGATTATCGATTTTACTTATTGTGTCCTACATTTAGGGTGTTTTTTATATTTAATTTTAAATCTTAATTTTAAAAAATATATATGATTCTTATCTTTTCTGATTCACTTATCCAATCTCCCTCCATAGTCTTAGTTTGGCACATAATTTTCTTTTAACGATTTCGATAATTTTCTGATGTTGTAATTTAGGTGCCTTTGAAGTTTGGTTCTAACGTGTGGCCTACCACTACCTATAATAGGGGTCTTCATGGGTTGGTTTGACTAAGATATAGACTTGAATTGAAACCTAGCCGAACCCTTGAAAGCCTTATAGTCTAAGGGAAGTATCTTGTGTTCCATGTAGCCTTTGGAGTCTTATATTCTCATTCTATTTCCTTTATAATTCTATTTGGTCATTGTTTATCTGTTAGGACCTTCTGATGTTTATCTTATCTCATTGCTGTCTATAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGACAAATGGCTTGAAAAGAAGGGGATAAAGAACGCAAATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAGTCGGAATGCCGTTTCAAGAAGATTCGGAAGCCTCAATATTTCAACCGGTAAATGATCCTCACAAAAGCTGTTTCTATGCATAGTACAAATAATAGTTCAAATCATATCACGATAACCTAAATAATCATGAACTCGGAAGTGCACTAGAAGAACAAAATCATTTTAATGCTATTGGTTGTGCTGTTAGTAATCAATCAAGGTAGGAGCATCCTCACATTTGGAGCTTAAAATCTCGCAGGAAAAACAAACCAAACAGTTTATCATTGATACCTTCATCCTTCAGCCATTTGCCTAGTCTAACTTTTACAGCTTTAGCTGACGGAGCAACTTTTCATCTTCTCTAATTTGCCCCCAATGACTATCAAGTGTTCAGCATTTTTGTTTATCAATTACTACTGTTTATAGCTTCAGTGGTAAAACGTTCCTACATTTAGTAGGAAAGTGCTCTGTTTTTAGCTTTAAACGGACTGGCATATTTCATTTGCCTTTAGAATAGTATTCCCTTTGAATTGTTCATTGACAGTCAGTTACATTTCAAGTAAAAGAACGAACATACATCGATAAACATACTCGGTGGTGCCCATAACTTTTCACCAGTAGATAAACACGGTTATAATTACTAAAAAATTGTATATTTATATTTAGTACTGCAATTTAGTTCTTACTTCTCTCTTCTGATTTGACTGATGACAGATGGATCAACTTAAAAATTCCATTTTGTGAGGTTTTTGGTGGACAACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGATTATCTTGGCAAGGTCGTGCTCACTGTGGTCTCGACGATGCCAAGAACACTGCACGTTTACTCGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATTACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTTCAATGGAAACAACAACCCCCAGGAGGCGTTACATTCCCGCCGCAACCGCCATTGAAATCAAAGCCTATGCACATTCCCATCTTCCATTACCACCCCTACTGTATCTGTGGGGTAAGGAGCAGCCGAGGTATGGTTCGGAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAATTGGACTGCCACCAAGGGGGCACGATGCCATTACTTCCAATGGGCCTCTCCCTGATGCATGGAAAGATTTATGAATCTACTTGTTTGAAGCGTTCACTAAAGGAATTTATGTAAAGAAAAGAAAAAGAAAAAAAAGGTTGTATTGAAAGAAATGAAGCTTGATATCTGTCTCCTGATAGAAGGTGCTTGGGTGTGCTTGGTGAGGTTTCTGAGTCATACAGAACTAAAAAGAGTTGGTGGTTGAGTTATGAAACTATGGTCCTTCAAAAGTGGCGGTGCAAGCTTTTTGGAGGCTTCCCAACTTGTAAAGCTGACTTGACTTTATTGACTGGAGAACCTATTGGGGAGTGAGTTGCGAGAGTTGATGGGTAGTTTAGGATGATGCTTTTCTAATGATCGATTAGGCATGCAATTATCTGAAGGATCTTTTGGATAGCTATCCTTCGCTTTGCTTTGCTTTGCTTTTTATTCTTAATCTTAATCTAATGGCAATCAGTAGAATGCTAATATCAGCCCCCCCCCC

mRNA sequence

ATTTTTCGATTCTTCCTTCCAAACTGCTTCCCTCCTCTCTCCCGGCTCACCTTCCAGATCACACAGGAGCGGATTTCAGAGGTAGATCTGATGTACTTGGTGGTCGATCTCAATTACTCTTCTCAAGATCATGATGGCCCTTGAACGCAAAGCCATCCTTTTCAAATTTTCCCTTGTTGTGCTGTGGATGAGCAACAATGATCGAGTATGCAACTTCCAATTTTGTTGATGAGAACCGGTGTTATCTGCCCCGTAGAGATTTTCTTAGATAAATGTCAGAATTTTCATTACTGAGGAAACAATACCAGAGGTGGAAAGCAATTTTTAGAGTTCTCTACGATATTGCTATCCTGTAAGCCTCCCTTGACTTTATGTTGCTGAAATGACATCTTTTGAATCAGTATGAATCTGCCAGTCGCAAGAAATGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTCTGCAACATAGTGGAAATTCTGTTGATGGTTTCCAAGAACGTACGGATGAAATCAGTTGTTATAGCAGGAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTTATTGAACGTCCAAATGAATTTCACAACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCTGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATTTTCGGCTGCAAGAGTTTCAATATTTTGTGGTTATAGACTTTGAAGCAACATGTGACAAGGATAAAAATCCCCATCCTCAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTCGAAGCTTGCTTTCAAACGTATGTGCGCCCAACTTGCAATCAGCTCTTAAGCGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGACAAATGGCTTGAAAAGAAGGGGATAAAGAACGCAAATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAGTCGGAATGCCGTTTCAAGAAGATTCGGAAGCCTCAATATTTCAACCGATGGATCAACTTAAAAATTCCATTTTGTGAGGTTTTTGGTGGACAACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGATTATCTTGGCAAGGTCGTGCTCACTGTGGTCTCGACGATGCCAAGAACACTGCACGTTTACTCGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATTACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTTCAATGGAAACAACAACCCCCAGGAGGCGTTACATTCCCGCCGCAACCGCCATTGAAATCAAAGCCTATGCACATTCCCATCTTCCATTACCACCCCTACTGTATCTGTGGGGTAAGGAGCAGCCGAGGTATGGTTCGGAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAATTGGACTGCCACCAAGGGGGCACGATGCCATTACTTCCAATGGGCCTCTCCCTGATGCATGGAAAGATTTATGAATCTACTTGTTTGAAGCGTTCACTAAAGGAATTTATGTAAAGAAAAGAAAAAGAAAAAAAAGGTTGTATTGAAAGAAATGAAGCTTGATATCTGTCTCCTGATAGAAGGTGCTTGGGTGTGCTTGGTGAGGTTTCTGAGTCATACAGAACTAAAAAGAGTTGGTGGTTGAGTTATGAAACTATGGTCCTTCAAAAGTGGCGGTGCAAGCTTTTTGGAGGCTTCCCAACTTGTAAAGCTGACTTGACTTTATTGACTGGAGAACCTATTGGGGAGTGAGTTGCGAGAGTTGATGGGTAGTTTAGGATGATGCTTTTCTAATGATCGATTAGGCATGCAATTATCTGAAGGATCTTTTGGATAGCTATCCTTCGCTTTGCTTTGCTTTGCTTTTTATTCTTAATCTTAATCTAATGGCAATCAGTAGAATGCTAATATCAGCCCCCCCCCC

Coding sequence (CDS)

ATGAATCTGCCAGTCGCAAGAAATGAAAGTATGCAGAGGAACTGTGAGGCCTCTATAAAATGCCTCCAGAATAATGGAATGCCATTCAGTCTGCAACATAGTGGAAATTCTGTTGATGGTTTCCAAGAACGTACGGATGAAATCAGTTGTTATAGCAGGAATGATATTCCTGAAACAAACCACCCATTGGTTAACAATTTTATTGAACGTCCAAATGAATTTCACAACAAACCTGCTTATCAGCATAATTCTGGATCATGGCCTGCCTTCCATTTTGACTCTCAAAAGGTGCAGCAGTGCCAGATGAGTGCTTCCGAATGCCAGTTCTACTCTTTGCCAGTGGAGAATCGCTTCCATTATGTTCCTTTCAAAATGTTTGAACAGAATTACCATTGTGATTTTCGGCTGCAAGAGTTTCAATATTTTGTGGTTATAGACTTTGAAGCAACATGTGACAAGGATAAAAATCCCCATCCTCAGGAGATAATTGAGTTCCCATCTGTCATTGTAAGTAGTGTGACTGGCCAACTCGAAGCTTGCTTTCAAACGTATGTGCGCCCAACTTGCAATCAGCTCTTAAGCGACTTCTGCAGGGATCTAACTGGCATTCAGCAAATTCAGGTGGACAGAGGTGTTACTCTCAATGAAGCTCTCCTCAGGCATGACAAATGGCTTGAAAAGAAGGGGATAAAGAACGCAAATTTTGCGGTGGTAACTTGGTCAAACTGGGATTGCCGAGTCATGTTAGAGTCGGAATGCCGTTTCAAGAAGATTCGGAAGCCTCAATATTTCAACCGATGGATCAACTTAAAAATTCCATTTTGTGAGGTTTTTGGTGGACAACGATGCAATCTAAAGGAAGCTGTTGAGATGGCAGGATTATCTTGGCAAGGTCGTGCTCACTGTGGTCTCGACGATGCCAAGAACACTGCACGTTTACTCGCCCTTCTTATGCATAGAGGCTTCAGATTCTCCATTACCAATTCATTGATGTGGCAGACTTCTGACTGCCCATTTCAATGGAAACAACAACCCCCAGGAGGCGTTACATTCCCGCCGCAACCGCCATTGAAATCAAAGCCTATGCACATTCCCATCTTCCATTACCACCCCTACTGTATCTGTGGGGTAAGGAGCAGCCGAGGTATGGTTCGGAAGCCAGGACCAAAGCAAGGGAGTTTTTTCTTTGGCTGTGGGAATTGGACTGCCACCAAGGGGGCACGATGCCATTACTTCCAATGGGCCTCTCCCTGA

Protein sequence

MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHCGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP

Homology

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BLAST of CmoCh12G001080 vs. ExPASy Swiss-Prot
Match: A8K979 (ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 5.3e-40
Identity = 89/211 (42.18%), Postives = 127/211 (60.19%), Query Frame = 0


Query: 137 QEFQYFVVIDFEATCDKD-KNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 196
           Q F Y +VIDFE+TC  D K+ H QEIIEFP+V++++ TGQ+++ FQ YV+P  + +LS+
Sbjct: 32  QLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPILSE 91

Query: 197 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNANFAV---------------VT 256
           FC +LTGI+Q QVD GV L   L +  KW+ K +  KN  FA                VT
Sbjct: 92  FCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVT 151

Query: 257 WSNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGR 316
           WS+WD  V LE EC+ K++ KP + N WI+L+  +   +  +   L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYRRKPKGLSGALQEVGIEFSGR 211

Query: 317 AHCGLDDAKNTARLLALLMHRGFRFSITNSL 331
            H GLDD++NTA L   ++  G    IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCVMKITRSL 242

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BLAST of CmoCh12G001080 vs. ExPASy Swiss-Prot
Match: Q5HZL1 (ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.5e-39
Identity = 86/210 (40.95%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 137 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSDF 196
           Q F+Y ++IDFE+TC KD     QEIIEFP+V+++   G++E+ F TYV+P  + +LSDF
Sbjct: 33  QFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESEFHTYVQPQEHPILSDF 92

Query: 197 CRDLTGIQQIQVDRGVTLNEALLRHDKWLEK----KGI------------KNANFAVVTW 256
           C +LTGI Q QVD GV L   L + + W++K    KGI            ++   A VTW
Sbjct: 93  CTELTGINQQQVDDGVPLKICLSQFNSWIQKLQKEKGIAFVTAVPTHSTAEHKMCAFVTW 152

Query: 257 SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA 316
           S+WD  V L  ECR K+++KP   N WI+L+  +   +  +   L  A++  G+ + GR 
Sbjct: 153 SDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRRPKGLNGALQDLGIEFSGRE 212

Query: 317 HCGLDDAKNTARLLALLMHRGFRFSITNSL 331
           H GLDD++NTA+L + ++  G    IT SL
Sbjct: 213 HSGLDDSRNTAKLASRMICDGCVMKITKSL 242

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BLAST of CmoCh12G001080 vs. ExPASy Swiss-Prot
Match: Q5BKS4 (ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 8.5e-38
Identity = 83/211 (39.34%), Postives = 124/211 (58.77%), Query Frame = 0


Query: 137 QEFQYFVVIDFEATCDKDKNPHPQ-EIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLLSD 196
           Q + Y +V+DFE+TC  D   H   EIIEFP+V++++ TG++E+ F  YV+P  + +LS+
Sbjct: 32  QLYAYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQEHPILSE 91

Query: 197 FCRDLTGIQQIQVDRGVTLNEALLRHDKWLEK-KGIKNANFAV---------------VT 256
           FC +LTGI+Q+QVD GV L   L +  KW+ K +  +  +FA                VT
Sbjct: 92  FCTELTGIKQVQVDEGVPLKICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVT 151

Query: 257 WSNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGR 316
           WS+WD  V LE ECR K++ KP + N WI+L+  +   +  +   L  A++  G+ + GR
Sbjct: 152 WSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYKRKPKGLSGALQEVGIEFSGR 211

Query: 317 AHCGLDDAKNTARLLALLMHRGFRFSITNSL 331
            H GLDD++NTA L   ++  G    IT SL
Sbjct: 212 EHSGLDDSRNTALLAWKMIRDGCLMKITRSL 242

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BLAST of CmoCh12G001080 vs. ExPASy Swiss-Prot
Match: A6QLH5 (ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 134 FRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 193
           F  Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 197

Query: 194 SDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNANFAVVTWSNWDCRVMLES 253
           + FC +LTGI Q  VD   +L + L R D+W+ K+G+   N     VT  +WD +VML  
Sbjct: 198 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 257

Query: 254 ECRFKKIRKPQYFNRWINLKIPFCEVFG-GQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT 313
           +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN 
Sbjct: 258 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 317

Query: 314 ARLLALLMHRGFRFSITN 329
           A ++  L +RGF F  T+
Sbjct: 318 ANIMKTLAYRGFIFKQTS 334

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BLAST of CmoCh12G001080 vs. ExPASy Swiss-Prot
Match: O43414 (ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 2.3e-35
Identity = 79/198 (39.90%), Postives = 115/198 (58.08%), Query Frame = 0


Query: 134 FRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCNQLL 193
           F  Q + YF+V+DFEATCDK +  HPQEIIEFP + ++  T ++E+ F  YV+P  +  L
Sbjct: 138 FPPQRYHYFLVLDFEATCDKPQ-IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQL 197

Query: 194 SDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGI--KNANFAVVTWSNWDCRVMLES 253
           + FC +LTGI Q  VD   +L + L R D+W+ K+G+   N     VT  +WD +VML  
Sbjct: 198 TPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNVKSIFVTCGDWDLKVMLPG 257

Query: 254 ECRFKKIRKPQYFNRWINLKIPFCEVFG-GQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT 313
           +C++  +    YF +WINLK  +    G   +  L +  +   L   GR H G+DD KN 
Sbjct: 258 QCQYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNI 317

Query: 314 ARLLALLMHRGFRFSITN 329
           A ++  L +RGF F  T+
Sbjct: 318 ANIMKTLAYRGFIFKQTS 334

[Close]

BLAST of CmoCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1GH41 (3'-5' exoribonuclease 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454139 PE=4 SV=1)

HSP 1 Score: 903.7 bits (2334), Expect = 2.9e-259
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0


Query: 1   MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETN 60
           MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETN
Sbjct: 1   MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETN 60

Query: 61  HPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHY 120
           HPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHY
Sbjct: 61  HPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHY 120

Query: 121 VPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC 180
           VPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC
Sbjct: 121 VPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC 180

Query: 181 FQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTW 240
           FQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTW
Sbjct: 181 FQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTW 240

Query: 241 SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA 300
           SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA
Sbjct: 241 SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA 300

Query: 301 HCGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSK 360
           HCGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSK
Sbjct: 301 HCGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSK 360

Query: 361 PMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 418
           PMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 361 PMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417

[Close]

BLAST of CmoCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1KK12 (uncharacterized protein LOC111496425 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496425 PE=4 SV=1)

HSP 1 Score: 900.2 bits (2325), Expect = 3.2e-258
Identity = 415/417 (99.52%), Postives = 416/417 (99.76%), Query Frame = 0


Query: 1   MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETN 60
           MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYS NDIPETN
Sbjct: 1   MNLPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETN 60

Query: 61  HPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHY 120
           HPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHY
Sbjct: 61  HPLVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHY 120

Query: 121 VPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC 180
           VPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC
Sbjct: 121 VPFKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEAC 180

Query: 181 FQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTW 240
           FQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTW
Sbjct: 181 FQTYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTW 240

Query: 241 SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA 300
           SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA
Sbjct: 241 SNWDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRA 300

Query: 301 HCGLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSK 360
           HCGLDDAKNTARLLALLMHRGFRFSITNSL+WQTSDCPFQWKQQPPGGVTFPPQPPLKSK
Sbjct: 301 HCGLDDAKNTARLLALLMHRGFRFSITNSLLWQTSDCPFQWKQQPPGGVTFPPQPPLKSK 360

Query: 361 PMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 418
           PMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 361 PMHIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 417

[Close]

BLAST of CmoCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1GI48 (3'-5' exoribonuclease 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454139 PE=4 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 3.4e-255
Identity = 410/415 (98.80%), Postives = 412/415 (99.28%), Query Frame = 0


Query: 3   LPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHP 62
           + + R ESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHP
Sbjct: 2   MALERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHP 61

Query: 63  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 122
           LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP
Sbjct: 62  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 121

Query: 123 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 182
           FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ
Sbjct: 122 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 181

Query: 183 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 242
           TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN
Sbjct: 182 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 241

Query: 243 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 302
           WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC
Sbjct: 242 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 301

Query: 303 GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 362
           GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM
Sbjct: 302 GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 361

Query: 363 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 418
           HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 362 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of CmoCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1KU41 (uncharacterized protein LOC111496425 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496425 PE=4 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 3.7e-254
Identity = 408/415 (98.31%), Postives = 411/415 (99.04%), Query Frame = 0


Query: 3   LPVARNESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHP 62
           + + R ESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYS NDIPETNHP
Sbjct: 2   MTLERKESMQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSSNDIPETNHP 61

Query: 63  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 122
           LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP
Sbjct: 62  LVNNFIERPNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVP 121

Query: 123 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 182
           FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ
Sbjct: 122 FKMFEQNYHCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQ 181

Query: 183 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 242
           TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN
Sbjct: 182 TYVRPTCNQLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSN 241

Query: 243 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 302
           WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC
Sbjct: 242 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 301

Query: 303 GLDDAKNTARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 362
           GLDDAKNTARLLALLMHRGFRFSITNSL+WQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM
Sbjct: 302 GLDDAKNTARLLALLMHRGFRFSITNSLLWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPM 361

Query: 363 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 418
           HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 362 HIPIFHYHPYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 416

[Close]

BLAST of CmoCh12G001080 vs. ExPASy TrEMBL
Match: A0A6J1GI80 (3'-5' exoribonuclease 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111454139 PE=4 SV=1)

HSP 1 Score: 884.4 bits (2284), Expect = 1.8e-253
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 0


Query: 11  MQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHPLVNNFIER 70
           MQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHPLVNNFIER
Sbjct: 1   MQRNCEASIKCLQNNGMPFSLQHSGNSVDGFQERTDEISCYSRNDIPETNHPLVNNFIER 60

Query: 71  PNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVPFKMFEQNY 130
           PNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVPFKMFEQNY
Sbjct: 61  PNEFHNKPAYQHNSGSWPAFHFDSQKVQQCQMSASECQFYSLPVENRFHYVPFKMFEQNY 120

Query: 131 HCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 190
           HCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN
Sbjct: 121 HCDFRLQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPTCN 180

Query: 191 QLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSNWDCRVMLE 250
           QLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSNWDCRVMLE
Sbjct: 181 QLLSDFCRDLTGIQQIQVDRGVTLNEALLRHDKWLEKKGIKNANFAVVTWSNWDCRVMLE 240

Query: 251 SECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT 310
           SECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT
Sbjct: 241 SECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHCGLDDAKNT 300

Query: 311 ARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPMHIPIFHYH 370
           ARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPMHIPIFHYH
Sbjct: 301 ARLLALLMHRGFRFSITNSLMWQTSDCPFQWKQQPPGGVTFPPQPPLKSKPMHIPIFHYH 360

Query: 371 PYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 418
           PYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP
Sbjct: 361 PYCICGVRSSRGMVRKPGPKQGSFFFGCGNWTATKGARCHYFQWASP 407

[Close]

BLAST of CmoCh12G001080 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 4.8e-20
Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 137 QEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 196
           QEF +F+VID E            EI+EFP +IV + T ++   F  +VRPT    Q ++
Sbjct: 124 QEFNFFLVIDLEGKV---------EILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAIN 183

Query: 197 DFCRDL---TGIQQIQVDRGVTLNEALLRHDKWLEKK---------GIKNANFAVVTWSN 256
            +        G+ ++  D  +   + +   + WL +          G+ +A F  VT  N
Sbjct: 184 KYIEGKYGELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAF--VTCGN 243

Query: 257 WDCRVMLESECRFKKIRKPQYFNRWINLKIPFCEVFGGQRCNLKEAVEMAGLSWQGRAHC 316
           WD +  +  +C    I  P YF  WINLK  +   +G +   +   +   G+   G  H 
Sbjct: 244 WDIKTKIPEQCVVSNINLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHL 303

Query: 317 GLDDAKNTARLLALLMHRGFRFSIT 328
           G+DD KN  R++  ++  G    +T
Sbjct: 304 GIDDTKNITRVVQRMLSEGAVLKLT 317

The following BLAST results are available for this feature:

BLAST of CmoCh12G001080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8K979	5.3e-40	42.18	ERI1 exoribonuclease 2 OS=Homo sapiens OX=9606 GN=ERI2 PE=2 SV=2	[more]
Q5HZL1	1.5e-39	40.95	ERI1 exoribonuclease 2 OS=Xenopus laevis OX=8355 GN=eri2 PE=2 SV=1	[more]
Q5BKS4	8.5e-38	39.34	ERI1 exoribonuclease 2 OS=Mus musculus OX=10090 GN=Eri2 PE=2 SV=1	[more]
A6QLH5	2.3e-35	39.90	ERI1 exoribonuclease 3 OS=Bos taurus OX=9913 GN=ERI3 PE=2 SV=1	[more]
O43414	2.3e-35	39.90	ERI1 exoribonuclease 3 OS=Homo sapiens OX=9606 GN=ERI3 PE=1 SV=2	[more]

BLAST of CmoCh12G001080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GH41	2.9e-259	100.00	3'-5' exoribonuclease 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KK12	3.2e-258	99.52	uncharacterized protein LOC111496425 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GI48	3.4e-255	98.80	3'-5' exoribonuclease 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KU41	3.7e-254	98.31	uncharacterized protein LOC111496425 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GI80	1.8e-253	100.00	3'-5' exoribonuclease 1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CmoCh12G001080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15140.1	4.8e-20	27.32	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 141..323 e-value: 2.0E-18 score: 77.2
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 143..314 e-value: 4.0E-26 score: 92.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 131..344 e-value: 2.4E-75 score: 254.8
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 6..416
None	No IPR available	PANTHER	PTHR23044:SF64	ERI1 EXORIBONUCLEASE 2-LIKE	coord: 6..416
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 142..318 e-value: 1.29285E-67 score: 210.54
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 139..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh12G001080.1	CmoCh12G001080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding