CmoCh11G020600 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G020600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 13954285 .. 13955593 (+)
RNA-Seq ExpressionCmoCh11G020600
SyntenyCmoCh11G020600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACCCCCAATCCCCTCTCTCTCTTTTCCCCTCTGCCTCCCTCTATAAAGCTCCAAATATGGCCGCCCAAGTGAGCAGTCTTATTCGAGTTCTCGCCGGCTACAAGGACCAAGACAACCGGGCCGCCCTCGAGGAATCAACGGCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGGTTTCTTCAATTTCATCCCTTTTTAACTTCCAAAATCTCAACGCCTCCTTCATTTTATAGCAACTCTTCGTTAAATCTTCCAATTCAAGATTCCTTTTATTCAATTCAGAAATTGGGCTGAAAAAAATGGGGTGGGAACTATTTTATTGCACTTGTGGGTGTGCTCTATGTTCTTGGATGCTCTGCAAATACTGTAACTTTTTTTATATTTTTCCTCTGATTTTAATGACATTCATTGCGGCGCTTTATTTTATTTTTTAAAAGAGTTCTTGGTGTTTGTACTCGCCTGATTAATTATCCCCACCCTGACCCTATTCAATTACCACCCCCTCTCCTCTGAAATCATTGGGTTAAAAACAAATCCTCTGTTCGTGTTTGCAGTCGGGAAAAGTTTACATACAGAGAAGTCAGACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGCTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGCCGAGCATCAAGAAACCTCGAATCGACCTAAACATATCCATATAAAAATGGTCGGGAATCGTTCATCATGAACCAATATATAAAATGAAGAAATTTTGGGGCATGGTTCTATTGTTGCGGGTACATGTAAAATGAACATATTTACACCAAAAATATTATGCCTTCCATTGTTCAATTTGTTGGGTTTGTCTGGCTCTTTCAATTTTTGTTTTGTTTGACCATTTTGG

mRNA sequence

CAAACCCCCAATCCCCTCTCTCTCTTTTCCCCTCTGCCTCCCTCTATAAAGCTCCAAATATGGCCGCCCAAGTGAGCAGTCTTATTCGAGTTCTCGCCGGCTACAAGGACCAAGACAACCGGGCCGCCCTCGAGGAATCAACGGCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAGACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGCTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGCCGAGCATCAAGAAACCTCGAATCGACCTAAACATATCCATATAAAAATGGTCGGGAATCGTTCATCATGAACCAATATATAAAATGAAGAAATTTTGGGGCATGGTTCTATTGTTGCGGGTACATGTAAAATGAACATATTTACACCAAAAATATTATGCCTTCCATTGTTCAATTTGTTGGGTTTGTCTGGCTCTTTCAATTTTTGTTTTGTTTGACCATTTTGG

Coding sequence (CDS)

ATGGCCGCCCAAGTGAGCAGTCTTATTCGAGTTCTCGCCGGCTACAAGGACCAAGACAACCGGGCCGCCCTCGAGGAATCAACGGCTCTCACTACTCGTGATTTGCTCGGTCAATCTTCCAACCTCGCTGACTCTCAGGAACTGGACCTCGATTTGCAGGTTCCCTCCGGCTGGGAAAAGCGCCTCGACTTGAAGTCGGGAAAAGTTTACATACAGAGAAGTCAGACTCCAGATTCTCCTCTGAATTCAGATTCCAAACAACGCCAAATGAAGAATCAAACAGAATCCAAATCCCAGGACTTGAATTTCCCCCCATCTCCTTCAAAACGAACATTAAATCTCTTCAATGAAACCAGCTTGGATTTGAATTTGACGTCGTCGACCAATTACGCCAGCGTTTGCACTCTGGATAAGGTCAAATCTGCTTTAGAAAGGGCCGACAAGGAGCTGATTAAAAAACGGTCTACGCTTTGGAAGTCGCCGTCCTCCCCCTCGGCGGCGAAGGAAATTCAAGAAGAAGAGGCGGCGGAAAGTAGAAAGTCGGCGGCGCCGATGGCGGTGGGTTGTCCTGGATGTCTATCTTATGTATTGGTGACGAAAAACAACCCAAGATGTCCTCGATGCAATTCTGTTGTTCCATTGCCGAGCATCAAGAAACCTCGAATCGACCTAAACATATCCATATAA

Protein sequence

MAAQVSSLIRVLAGYKDQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSLDLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI
Homology
BLAST of CmoCh11G020600 vs. ExPASy TrEMBL
Match: A0A6J1EXD9 (uncharacterized protein LOC111437042 OS=Cucurbita moschata OX=3662 GN=LOC111437042 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.8e-117
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MAAQVSSLIRVLAGYKDQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEK 60
           MAAQVSSLIRVLAGYKDQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEK
Sbjct: 1   MAAQVSSLIRVLAGYKDQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEK 60

Query: 61  RLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSL 120
           RLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSL
Sbjct: 61  RLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSL 120

Query: 121 DLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPSAAKEIQEEEAAESRK 180
           DLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPSAAKEIQEEEAAESRK
Sbjct: 121 DLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPSAAKEIQEEEAAESRK 180

Query: 181 SAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI 229
           SAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI
Sbjct: 181 SAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI 228

BLAST of CmoCh11G020600 vs. ExPASy TrEMBL
Match: A0A6J1JJG7 (uncharacterized protein LOC111486368 OS=Cucurbita maxima OX=3661 GN=LOC111486368 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 2.8e-115
Identity = 223/228 (97.81%), Postives = 227/228 (99.56%), Query Frame = 0

Query: 1   MAAQVSSLIRVLAGYKDQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEK 60
           MAAQVSSLIRVLAGY+DQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEK
Sbjct: 1   MAAQVSSLIRVLAGYEDQDNRAALEESTALTTRDLLGQSSNLADSQELDLDLQVPSGWEK 60

Query: 61  RLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNETSL 120
           RLDLKSGKVYIQRSQTPDSPLNS+SKQRQMKN+TESKSQDLNFPPSPSKRTLNLFNETSL
Sbjct: 61  RLDLKSGKVYIQRSQTPDSPLNSESKQRQMKNRTESKSQDLNFPPSPSKRTLNLFNETSL 120

Query: 121 DLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPSAAKEIQEEEAAESRK 180
           DLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSP AAKE+QEEEAAESRK
Sbjct: 121 DLNLTSSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPLAAKEVQEEEAAESRK 180

Query: 181 SAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI 229
           SAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI
Sbjct: 181 SAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLNISI 228

BLAST of CmoCh11G020600 vs. ExPASy TrEMBL
Match: A0A0A0K3J9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238440 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 207/243 (85.19%), Postives = 215/243 (88.48%), Query Frame = 0

Query: 1   MAAQVSSLIRVLAGYKDQDNRAAL---EESTALTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSLIRVLAGYKD DNR AL   ++STAL TRDLLGQSSNL DSQELDLDLQVP+G
Sbjct: 1   MAAEVSSLIRVLAGYKDDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDLQVPTG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQ QM NQTESK QDLNFPPSPSKRTLNLFNE
Sbjct: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTLNLFNE 120

Query: 121 TSLDLNLT---SSTNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPS--------- 180
           TSLDL LT   SSTNYASVCTLDKVKSALERADKEL+KKRS+LWKS SSPS         
Sbjct: 121 TSLDLKLTSSPSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSSSAA 180

Query: 181 AAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLN 229
           A KEIQEEEAAE R SAAPMAVGCPGCLSYVLV KNNPRCPRCNSVVPLP+IKKPRIDLN
Sbjct: 181 AGKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKPRIDLN 240

BLAST of CmoCh11G020600 vs. ExPASy TrEMBL
Match: A0A1S3BGM6 (uncharacterized protein LOC103489640 OS=Cucumis melo OX=3656 GN=LOC103489640 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.5e-100
Identity = 207/243 (85.19%), Postives = 216/243 (88.89%), Query Frame = 0

Query: 1   MAAQVSSLIRVLAGYKDQDNRAAL---EESTALTTRDLLGQSSNLADSQELDLDLQVPSG 60
           MAA+VSSLIRVLAGYK+ DNR AL   ++STAL TRDLLGQSSNL DSQELDLDLQVP+G
Sbjct: 1   MAAEVSSLIRVLAGYKEDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDLQVPTG 60

Query: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLFNE 120
           WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQ QM NQTESK QDLNFPPSPSKRTLNLFNE
Sbjct: 61  WEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTLNLFNE 120

Query: 121 TSLDLNLTS----STNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPS-------- 180
           TSLDL LTS    STNYASVCTLDKVKSALERADKEL+KKRS+LWKS SSPS        
Sbjct: 121 TSLDLKLTSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSSSA 180

Query: 181 AAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKKPRIDLN 229
           AAKEIQEEEAAE R SAAPMAVGCPGCLSYVLV KNNPRCPRCNSVVPLP+IKKPRIDLN
Sbjct: 181 AAKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKPRIDLN 240

BLAST of CmoCh11G020600 vs. ExPASy TrEMBL
Match: A0A6J1HWE1 (uncharacterized protein LOC111468450 OS=Cucurbita maxima OX=3661 GN=LOC111468450 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 8.1e-94
Identity = 204/250 (81.60%), Postives = 213/250 (85.20%), Query Frame = 0

Query: 1   MAAQVSSLIRVL--AGYKDQDNRAAL---EESTALTTRDLLGQSSNLADSQELDLDLQVP 60
           MAAQVSSLIRVL  AGY D+DNR  L   +E T L TRDLLGQSSNLA SQELDLDLQVP
Sbjct: 1   MAAQVSSLIRVLAGAGYNDEDNRTPLGNGQEPTPLVTRDLLGQSSNLAASQELDLDLQVP 60

Query: 61  SGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRTLNLF 120
           SGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQ QM NQTESK QDLNFPPSPSKRTLNLF
Sbjct: 61  SGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQHQMTNQTESKFQDLNFPPSPSKRTLNLF 120

Query: 121 NETSLDLNLTS--------STNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSPS-- 180
           NETSLDL LTS        STNYASVCTLDKVKSALERADKEL+KKRS+LWKS SSPS  
Sbjct: 121 NETSLDLKLTSSSPSSPSPSTNYASVCTLDKVKSALERADKELVKKRSSLWKSTSSPSYS 180

Query: 181 -----AAKEIQ-EEEAAESR-KSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIK 229
                AAKEIQ EEEA E+R ++AAPMAVGC GCLSYVLVTKNNPRCPRCNSVVPL S+K
Sbjct: 181 SSSSAAAKEIQEEEEAVENRNEAAAPMAVGCRGCLSYVLVTKNNPRCPRCNSVVPLASMK 240

BLAST of CmoCh11G020600 vs. TAIR 10
Match: AT1G79160.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16500.1); Has 104 Blast hits to 102 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 104; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 181.4 bits (459), Expect = 8.1e-46
Identity = 122/247 (49.39%), Postives = 156/247 (63.16%), Query Frame = 0

Query: 1   MAAQVSSLIRVLAGYKDQ----DNRAALEESTALTTRDLLGQSSNLAD--SQELDLDLQV 60
           MAA VSSL+R+L+GYKD      + A  + S AL TRDLLG         S ELDLDLQV
Sbjct: 5   MAADVSSLVRLLSGYKDDRAVVKDSAGAKSSAALMTRDLLGNGRGGGGDRSLELDLDLQV 64

Query: 61  PSGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQRQMKNQTESKSQDLNFPPSPSKRT--L 120
           P+G+EKRLDLKSGKVY+QR  +  S   +++ Q    NQT    QDLNFPP     +  L
Sbjct: 65  PTGYEKRLDLKSGKVYLQRCNSTSSSSITNADQ---TNQTVPTFQDLNFPPPTLNNSPLL 124

Query: 121 NLFNETSLDLNLTSS--------TNYASVCTLDKVKSALERADKELIKKRSTLWKSPSSP 180
           NLF++T+ +L L  S        +N  SVCTLDKVKSALERA+++       ++K   SP
Sbjct: 125 NLFDDTTPELKLLPSSRSSRPNTSNLQSVCTLDKVKSALERAERD-----PAMFKKRQSP 184

Query: 181 SAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPS---IKKPR 229
                + +    E+   A+P+  GCPGCLSYVLV  NNP+CPRC+++VPLP+    KKP+
Sbjct: 185 D--DTVYDHYRTEA--VASPVVAGCPGCLSYVLVMMNNPKCPRCDTIVPLPTNPMKKKPK 239

BLAST of CmoCh11G020600 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-42
Identity = 123/271 (45.39%), Postives = 159/271 (58.67%), Query Frame = 0

Query: 1   MAAQVSSLIRVLAGYKDQDNRAALEEST------ALTTRDLLGQSSNLA-------DSQE 60
           MAA VSSL+R+L+ +K  D+R  +++ST      AL TRDLLG    +         S E
Sbjct: 1   MAADVSSLVRILSRFK--DDRTVVKDSTGPRSTVALMTRDLLGIGGCVGGGGGGDEQSLE 60

Query: 61  LDLDLQVPSGWEKRLDLKSGKVYIQRSQTPDSPLNSD----SKQRQMKNQTESKSQDLNF 120
           LDLD+QVP+GWEKRLDLKSGKVY+Q+     S  +S            NQT  + QDLN 
Sbjct: 61  LDLDVQVPNGWEKRLDLKSGKVYLQQQCNSTSSSSSSHHHHHHHEDQTNQTVPRFQDLNV 120

Query: 121 PP----SPSKRTLNLF---NETSLDLNLTSS-------------------TNYASVCTLD 180
           PP     P+K  L+LF   ++TSL+L L  S                   +  +SVCTLD
Sbjct: 121 PPISDKFPAKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLD 180

Query: 181 KVKSALERADKELIKKRSTLWKSPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVL 229
           KVK ALERA+K+  KKR    +SP           +  A +  +A+ +A GCPGCLSYV 
Sbjct: 181 KVKLALERAEKD-TKKR----QSPEDDGV-----YDGTASATVAASQVAAGCPGCLSYVF 240

BLAST of CmoCh11G020600 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 43.5 bits (101), Expect = 2.6e-04
Identity = 25/89 (28.09%), Postives = 49/89 (55.06%), Query Frame = 0

Query: 141 SALERADKELIKKRSTLWKSPSSPSAAKEIQEEEA----AESRKSAAPMAVGCPGCLSYV 200
           S+  R  +   +  +T   SP S   + E+ ++E     + S ++ + + VGCP CL YV
Sbjct: 19  SSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDEPSVRYSTSPETTSMVLVGCPRCLMYV 78

Query: 201 LVTKNNPRCPRCNSVVPLPSIKKPRIDLN 226
           ++++++P+CP+C S V L  + +   + N
Sbjct: 79  MLSEDDPKCPKCKSTVLLDFLHENATNAN 107

BLAST of CmoCh11G020600 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 3.4e-04
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 0

Query: 155 STLWKSPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVT-KNNPRCPRCNSVVP 214
           S+L    SS S   E  E    E++   + + VGCP C+ Y++ + +N+PRCPRCNS V 
Sbjct: 23  SSLLTESSSSSLCSEEAEGGGGEAK---SMVVVGCPNCIMYIITSLENDPRCPRCNSHVL 80

BLAST of CmoCh11G020600 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 5.9e-04
Identity = 22/60 (36.67%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 160 SPSSPSAAKEIQEEEAAESRKSAAPMAVGCPGCLSYVLVTKNNPRCPRCNSVVPLPSIKK 219
           SPSS  +++  QE    E+    + + VGCP CL YV+++ ++P+CP+C S V L  +++
Sbjct: 40  SPSSCVSSETNQE----ENETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQE 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1EXD91.8e-117100.00uncharacterized protein LOC111437042 OS=Cucurbita moschata OX=3662 GN=LOC1114370... [more]
A0A6J1JJG72.8e-11597.81uncharacterized protein LOC111486368 OS=Cucurbita maxima OX=3661 GN=LOC111486368... [more]
A0A0A0K3J91.5e-10085.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238440 PE=4 SV=1[more]
A0A1S3BGM61.5e-10085.19uncharacterized protein LOC103489640 OS=Cucumis melo OX=3656 GN=LOC103489640 PE=... [more]
A0A6J1HWE18.1e-9481.60uncharacterized protein LOC111468450 OS=Cucurbita maxima OX=3661 GN=LOC111468450... [more]
Match NameE-valueIdentityDescription
AT1G79160.18.1e-4649.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G16500.11.4e-4245.39unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G06270.12.6e-0428.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G22270.13.4e-0440.98unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G11600.15.9e-0436.67unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..181
NoneNo IPR availablePANTHERPTHR33177:SF44F3O9.30coord: 1..227
NoneNo IPR availablePANTHERPTHR33177PUTATIVE-RELATEDcoord: 1..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G020600.1CmoCh11G020600.1mRNA