CmoCh11G020540 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G020540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NAC domain-containing protein
Location	Cmo_Chr11: 13914973 .. 13916079 (-)
RNA-Seq Expression	CmoCh11G020540
Synteny	CmoCh11G020540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTCCACAAGTTTGCGAGGGCGAGGATGAGATCCCGCTTCCCGGATTCCGATTCCATCCGACGGACGAAGAGCTGGTGAGCTTTTACCTTCGTGGGAAAGTTGAGAAGAGAGGCATCAGGCTTGGACTCATCAAACAGATGGATATCTACAAACACAACCCCTGGGATCTTCCGTGTAAGAACAAACTAAACATTACTATTAATATTATTGGATTCAAGGGAATAGAATTGTAAGGTCTTGTGGGGCGGTTGGCATGCAGATGGGAGCAGCAACGTGGGAGATAAAGAGTGGTACTTTTACTGCAAGAGAGGGAGGAAGTACAAGAACAGTATAAGGCCAAATAGAGTAACTGGGTCCGGGTTTTGGAAGGCCACTGGCATAGACAAGCCCGTGTATTCCAACGGAGGGGAGGGCAGTGAGTGCATTGGCCTCAAGAAAACGCTCGTTTACTATCGTGGAAGTGCTGGAAAAGGCACCAAAACTTATTGGATGATGCACGAGTTTCGCCTCCCACCTTCCAATTCCTATAACATTGCTCAAGAAGCGGTAACACATACTTCAAACTTCTTTTGCATTTCCTTGAACAGAATTCTTCTTTAATTTCCATGATTGTGTTTGTGTGCATGCATAAGGAAATCTGGACACTGTGCCGGATCTTCAAGAGGAATATGAGTTGCAGAAGGTATGGATCCAATTGGAACAAACAAGCGCCCACCAAAAACCCCTTGACTGATCAGAAGAACACGAAGCTGTGCAATGAGCAGGTCATGGGCAGTGGAGAAGTCAGTTATAACAATTGGAGCTGCGAGTCCATGATCGTCCAGAATGAGCAGAAGGCAGTTGTTCCTAGTGGCCCAAATAATCGTGAATGGATGAATAAGAATTATCAATACTATTACAGCAGCAGCTCCTCCATGGCCCCATCTCCAGTTTCCAGTGGCATTATTTCAGCTCCAATAGCCTTCCCCACAAATGAGCAGCTTGATGTGAATGATTTCTTCACAAATAGCAACTGGGATGAGCTGAGATCAGTGGTGGACATGTTGTGGTTAAAAGTCCCCAAATCAGATGAGATTTTCTTTCCTCTTTCTCTTCAGTAA

mRNA sequence

ATGGATACTCCACAAGTTTGCGAGGGCGAGGATGAGATCCCGCTTCCCGGATTCCGATTCCATCCGACGGACGAAGAGCTGGTGAGCTTTTACCTTCGTGGGAAAGTTGAGAAGAGAGGCATCAGGCTTGGACTCATCAAACAGATGGATATCTACAAACACAACCCCTGGGATCTTCCGTATGGGAGCAGCAACGTGGGAGATAAAGAGTGGTACTTTTACTGCAAGAGAGGGAGGAAGTACAAGAACAGTATAAGGCCAAATAGAGTAACTGGGTCCGGGTTTTGGAAGGCCACTGGCATAGACAAGCCCGTGTATTCCAACGGAGGGGAGGGCAGTGAGTGCATTGGCCTCAAGAAAACGCTCGTTTACTATCGTGGAAGTGCTGGAAAAGGCACCAAAACTTATTGGATGATGCACGAGTTTCGCCTCCCACCTTCCAATTCCTATAACATTGCTCAAGAAGCGAATTCTTCTTTAATTTCCATGATTGTGTTTGTGTGCATGCATAAGGAAATCTGGACACTGTGCCGGATCTTCAAGAGGAATATGAGTTGCAGAAGGTATGGATCCAATTGGAACAAACAAGCGCCCACCAAAAACCCCTTGACTGATCAGAAGAACACGAAGCTGTGCAATGAGCAGGTCATGGGCAGTGGAGAAGTCAGTTATAACAATTGGAGCTGCGAGTCCATGATCGTCCAGAATGAGCAGAAGGCAGTTGTTCCTAGTGGCCCAAATAATCGTGAATGGATGAATAAGAATTATCAATACTATTACAGCAGCAGCTCCTCCATGGCCCCATCTCCAGTTTCCAGTGGCATTATTTCAGCTCCAATAGCCTTCCCCACAAATGAGCAGCTTGATGTGAATGATTTCTTCACAAATAGCAACTGGGATGAGCTGAGATCAGTGGTGGACATGTTGTGGTTAAAAGTCCCCAAATCAGATGAGATTTTCTTTCCTCTTTCTCTTCAGTAA

Coding sequence (CDS)

ATGGATACTCCACAAGTTTGCGAGGGCGAGGATGAGATCCCGCTTCCCGGATTCCGATTCCATCCGACGGACGAAGAGCTGGTGAGCTTTTACCTTCGTGGGAAAGTTGAGAAGAGAGGCATCAGGCTTGGACTCATCAAACAGATGGATATCTACAAACACAACCCCTGGGATCTTCCGTATGGGAGCAGCAACGTGGGAGATAAAGAGTGGTACTTTTACTGCAAGAGAGGGAGGAAGTACAAGAACAGTATAAGGCCAAATAGAGTAACTGGGTCCGGGTTTTGGAAGGCCACTGGCATAGACAAGCCCGTGTATTCCAACGGAGGGGAGGGCAGTGAGTGCATTGGCCTCAAGAAAACGCTCGTTTACTATCGTGGAAGTGCTGGAAAAGGCACCAAAACTTATTGGATGATGCACGAGTTTCGCCTCCCACCTTCCAATTCCTATAACATTGCTCAAGAAGCGAATTCTTCTTTAATTTCCATGATTGTGTTTGTGTGCATGCATAAGGAAATCTGGACACTGTGCCGGATCTTCAAGAGGAATATGAGTTGCAGAAGGTATGGATCCAATTGGAACAAACAAGCGCCCACCAAAAACCCCTTGACTGATCAGAAGAACACGAAGCTGTGCAATGAGCAGGTCATGGGCAGTGGAGAAGTCAGTTATAACAATTGGAGCTGCGAGTCCATGATCGTCCAGAATGAGCAGAAGGCAGTTGTTCCTAGTGGCCCAAATAATCGTGAATGGATGAATAAGAATTATCAATACTATTACAGCAGCAGCTCCTCCATGGCCCCATCTCCAGTTTCCAGTGGCATTATTTCAGCTCCAATAGCCTTCCCCACAAATGAGCAGCTTGATGTGAATGATTTCTTCACAAATAGCAACTGGGATGAGCTGAGATCAGTGGTGGACATGTTGTGGTTAAAAGTCCCCAAATCAGATGAGATTTTCTTTCCTCTTTCTCTTCAGTAA

Protein sequence

MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIFKRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWSCESMIVQNEQKAVVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWDELRSVVDMLWLKVPKSDEIFFPLSLQ

Homology

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BLAST of CmoCh11G020540 vs. ExPASy Swiss-Prot
Match: Q9SK55 (Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.9e-63
Identity = 120/181 (66.30%), Postives = 139/181 (76.80%), Query Frame = 0


Query: 8   EGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVG 67
           E E+E PLPGFRFHPTDEEL+ +YLR KVE + I+L LIKQ+DIYK++PWDLP  SS VG
Sbjct: 12  EEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSS-VG 71

Query: 68  DKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRG 127
           +KEWYF+C RGRKY+NS+RPNRVTGSGFWKATGIDKPVYSN     +C+GLKK+LVYY G
Sbjct: 72  EKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN----LDCVGLKKSLVYYLG 131

Query: 128 SAGKGTKTYWMMHEFRLPPSNSYNI-AQEANSSLISMIVFVCMHKEIWTLCRIFKRNMSC 187
           SAGKGTKT WMMHEFRLP +   +  AQ+A               E+WTLCRIFKR  S 
Sbjct: 132 SAGKGTKTDWMMHEFRLPSTTKTDSPAQQA---------------EVWTLCRIFKRVTSQ 172

[Close]

BLAST of CmoCh11G020540 vs. ExPASy Swiss-Prot
Match: Q9ZVH0 (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-53
Identity = 111/243 (45.68%), Postives = 150/243 (61.73%), Query Frame = 0


Query: 11  DEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVGDKE 70
           +++ LPGFRFHPTDEELVSFYL+ KV+   + + LI+Q+DIYK++PWDLP   +  G+KE
Sbjct: 13  EDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP-KFAMTGEKE 72

Query: 71  WYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRGSAG 130
           WYFYC R RKY+NS RPNRVTG+GFWKATG D+P+YS+  EG++CIGLKK+LV+Y+G A 
Sbjct: 73  WYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSS--EGNKCIGLKKSLVFYKGRAA 132

Query: 131 KGTKTYWMMHEFRLPP-SNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIFKR--NMSCR 190
           KG KT WMMHEFRLP  S     ++    S +S         + W +CRIFK+    + R
Sbjct: 133 KGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVS-------PNDSWAICRIFKKTNTTTLR 192

Query: 191 RYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEV----SYNNWSCESMIVQNEQKAVVP 247
               ++    P +       N K  N     S ++    S+  +  E+M       +  P
Sbjct: 193 ALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKILKPSSHFQFHHENMNTPKTSNSTTP 245

[Close]

BLAST of CmoCh11G020540 vs. ExPASy Swiss-Prot
Match: Q9FIW5 (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANAC094 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.8e-52
Identity = 102/184 (55.43%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 8   EGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVG 67
           E  D++ LPGFRFHPTDEELVSFYL+ KV  + +   LIK++DIYK++PWDLP  ++ +G
Sbjct: 14  ERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAA-MG 73

Query: 68  DKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRG 127
           +KEWYFYC R RKY+NS RPNRVTG GFWKATG D+P+YS   + + CIGLKK+LV+YRG
Sbjct: 74  EKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSL--DSTRCIGLKKSLVFYRG 133

Query: 128 SAGKGTKTYWMMHEFRLPP---------SNSYNIAQEANSSLISMIVFVCMHKEIWTLCR 183
            A KG KT WMMHEFRLP           N  N  Q  N++  S  +      + W +CR
Sbjct: 134 RAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKEL---PSNDAWAICR 191

[Close]

BLAST of CmoCh11G020540 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.4e-42
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 16  PGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVGDKEWYFYC 75
           PGFRFHPTDEELV  YL+ K +   + + +I  +D+YK +PW+LP   ++ G++EWYF+ 
Sbjct: 19  PGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELP-AKASFGEQEWYFFS 78

Query: 76  KRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRGSAGKGTKT 135
            R RKY N  RPNR   SG+WKATG DKPV S GG GS+ +G+KK LV+Y G   KG K+
Sbjct: 79  PRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKS 138

Query: 136 YWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIFKRNMS 186
            W+MHE+RL  +   +I    N           +  + W LCRI+K+N S
Sbjct: 139 DWIMHEYRLTDNKPTHICDFGNKK-------NSLRLDDWVLCRIYKKNNS 180

[Close]

BLAST of CmoCh11G020540 vs. ExPASy Swiss-Prot
Match: Q9ZVP8 (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 1.1e-40
Identity = 83/173 (47.98%), Postives = 116/173 (67.05%), Query Frame = 0


Query: 10  EDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVGDK 69
           + ++ +PGFRFHPT+EEL+ FYLR KVE +   + LI  +D+Y+++PW+LP   + +G+K
Sbjct: 47  DHDMVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELP-AMAAIGEK 106

Query: 70  EWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRGSA 129
           EWYFY  R RKY+N  RPNRVT SG+WKATG D+ + S   E S  IGLKKTLV+Y G A
Sbjct: 107 EWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRS---ETSRPIGLKKTLVFYSGKA 166

Query: 130 GKGTKTYWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIFKR 183
            KGT+T W+M+E+RLP    ++  ++   + IS             LCR++KR
Sbjct: 167 PKGTRTSWIMNEYRLP----HHETEKYQKAEIS-------------LCRVYKR 198

[Close]

BLAST of CmoCh11G020540 vs. ExPASy TrEMBL
Match: A0A6J1ER43 (transcription factor JUNGBRUNNEN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437040 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 7.0e-184
Identity = 311/326 (95.40%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLP 60
           MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLP
Sbjct: 1   MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLP 60

Query: 61  YGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK 120
           YGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK
Sbjct: 61  YGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK 120

Query: 121 TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIF 180
           TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEA               EIWTLCRIF
Sbjct: 121 TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEA---------------EIWTLCRIF 180

Query: 181 KRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWSCESMIVQNEQKA 240
           KRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWSCESMIVQNEQKA
Sbjct: 181 KRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWSCESMIVQNEQKA 240

Query: 241 VVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWD 300
           VVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWD
Sbjct: 241 VVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWD 300

Query: 301 ELRSVVDMLWLKVPKSDEIFFPLSLQ 327
           ELRSVVDMLWLKVPKSDEIFFPLSLQ
Sbjct: 301 ELRSVVDMLWLKVPKSDEIFFPLSLQ 311

[Close]

BLAST of CmoCh11G020540 vs. ExPASy TrEMBL
Match: A0A6J1JEU8 (transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486273 PE=4 SV=1)

HSP 1 Score: 618.6 bits (1594), Expect = 1.5e-173
Identity = 297/323 (91.95%), Postives = 300/323 (92.88%), Query Frame = 0


Query: 1   MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLP 60
           MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIY+HNPWDLP
Sbjct: 1   MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYEHNPWDLP 60

Query: 61  YGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK 120
           YGS NVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK
Sbjct: 61  YGSGNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK 120

Query: 121 TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEA--------------NSSLISMIVF 180
           TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEA              NS LISMIVF
Sbjct: 121 TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEAVTHTSNFFCFSLKKNSFLISMIVF 180

Query: 181 VCMHKEIWTLCRIFKRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNN 240
           VCM KEIWTLCRIFKRNMSCRRYGSNWNKQ PTKNPLTDQKNTKLC EQ MGSGEVSYNN
Sbjct: 181 VCMQKEIWTLCRIFKRNMSCRRYGSNWNKQTPTKNPLTDQKNTKLCIEQGMGSGEVSYNN 240

Query: 241 WSCESMIVQNEQKAVVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNE 300
           WSCESMI+QNE KAVVPS PNNRE MN+NYQYYYSSSSSMAPSPVSSGIISAPIAFPTNE
Sbjct: 241 WSCESMIIQNEPKAVVPSDPNNREGMNENYQYYYSSSSSMAPSPVSSGIISAPIAFPTNE 300

Query: 301 QLDVNDFFTNSNWDELRSVVDML 310
           QLDVNDFFTNSNWDELRSVVDML
Sbjct: 301 QLDVNDFFTNSNWDELRSVVDML 323

[Close]

BLAST of CmoCh11G020540 vs. ExPASy TrEMBL
Match: A0A6J1JP97 (transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486273 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.3e-166
Identity = 284/309 (91.91%), Postives = 287/309 (92.88%), Query Frame = 0


Query: 1   MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLP 60
           MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIY+HNPWDLP
Sbjct: 1   MDTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYEHNPWDLP 60

Query: 61  YGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK 120
           YGS NVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK
Sbjct: 61  YGSGNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKK 120

Query: 121 TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIF 180
           TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEA               EIWTLCRIF
Sbjct: 121 TLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEA---------------EIWTLCRIF 180

Query: 181 KRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWSCESMIVQNEQKA 240
           KRNMSCRRYGSNWNKQ PTKNPLTDQKNTKLC EQ MGSGEVSYNNWSCESMI+QNE KA
Sbjct: 181 KRNMSCRRYGSNWNKQTPTKNPLTDQKNTKLCIEQGMGSGEVSYNNWSCESMIIQNEPKA 240

Query: 241 VVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWD 300
           VVPS PNNRE MN+NYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWD
Sbjct: 241 VVPSDPNNREGMNENYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQLDVNDFFTNSNWD 294

Query: 301 ELRSVVDML 310
           ELRSVVDML
Sbjct: 301 ELRSVVDML 294

[Close]

BLAST of CmoCh11G020540 vs. ExPASy TrEMBL
Match: A0A6J1GLV8 (transcription factor JUNGBRUNNEN 1-like OS=Cucurbita moschata OX=3662 GN=LOC111455439 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 4.4e-117
Identity = 221/321 (68.85%), Postives = 245/321 (76.32%), Query Frame = 0


Query: 2   DTPQV----CEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPW 61
           +TP+V     +G+D+IPLPGFRFHPTDEELVSFYLR KVEKR I L LIKQ+DIYKHNPW
Sbjct: 3   ETPEVGNGDGDGDDQIPLPGFRFHPTDEELVSFYLRRKVEKRPISLELIKQIDIYKHNPW 62

Query: 62  DLPYGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIG 121
           DLPY SSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEG+ECIG
Sbjct: 63  DLPYASSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGNECIG 122

Query: 122 LKKTLVYYRGSAGKGTKTYWMMHEFRLPP---------SNSYNIAQEANSSLISMIVFVC 181
           LKKTLVYYRGSAGKGTKT WMMHEFRLPP           S N A+EA            
Sbjct: 123 LKKTLVYYRGSAGKGTKTDWMMHEFRLPPPTPTAHKPHPTSKNFAEEA------------ 182

Query: 182 MHKEIWTLCRIFKRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWS 241
              EIWTLCRIFKRN+SCRRYG+       TKN ++++   K+CN   M        N S
Sbjct: 183 ---EIWTLCRIFKRNVSCRRYGT-------TKNSMSEKNTLKMCNNDPM------IVNLS 242

Query: 242 CESMIVQNEQKAVVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQL 301
           CESMI+Q E+K  +P+ PN++EW   NY  Y  SS+SM PSPVSSGIIS PI +PTN+QL
Sbjct: 243 CESMIIQTEKKPFLPNYPNHQEW--NNYDQY--SSTSMDPSPVSSGIISPPIGYPTNQQL 291

Query: 302 DVNDFFTNSNWDELRSVVDML 310
           DVNDFFTNSNWDELRSVVDML
Sbjct: 303 DVNDFFTNSNWDELRSVVDML 291

[Close]

BLAST of CmoCh11G020540 vs. ExPASy TrEMBL
Match: A0A6J1HZZ9 (transcription factor JUNGBRUNNEN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468456 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.8e-115
Identity = 219/321 (68.22%), Postives = 244/321 (76.01%), Query Frame = 0


Query: 2   DTPQV----CEGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPW 61
           +TP+V     +G+D+IPLPGFRFHPTDEELVSFYLR KVEKR I L LIKQ+DIYKHNPW
Sbjct: 3   ETPEVGNGDGDGDDQIPLPGFRFHPTDEELVSFYLRRKVEKRPISLELIKQIDIYKHNPW 62

Query: 62  DLPYGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIG 121
           DLPY SSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEG+ECIG
Sbjct: 63  DLPYASSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGNECIG 122

Query: 122 LKKTLVYYRGSAGKGTKTYWMMHEFRLPP---------SNSYNIAQEANSSLISMIVFVC 181
           LKKTLVYYRGSAGKGTKT WMMHEFRLPP           S N A+EA            
Sbjct: 123 LKKTLVYYRGSAGKGTKTDWMMHEFRLPPPTPTAHKPHPTSKNFAEEA------------ 182

Query: 182 MHKEIWTLCRIFKRNMSCRRYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEVSYNNWS 241
              EIWTLCRIFKRN+SCRRYG+       TKN ++++   K+CN   M        N+S
Sbjct: 183 ---EIWTLCRIFKRNVSCRRYGT-------TKNSMSEKNTLKMCNNDPM------IVNFS 242

Query: 242 CESMIVQNEQKAVVPSGPNNREWMNKNYQYYYSSSSSMAPSPVSSGIISAPIAFPTNEQL 301
            ES I+Q E+K  +P+ PN++EW   NY  Y  SS+SM PSPVSSGIIS PI +PTN+QL
Sbjct: 243 WESTIIQTEKKPFLPNYPNHQEW--NNYDQY--SSTSMDPSPVSSGIISPPIGYPTNQQL 291

Query: 302 DVNDFFTNSNWDELRSVVDML 310
           DVNDFFTNSNWDELRSVVDML
Sbjct: 303 DVNDFFTNSNWDELRSVVDML 291

[Close]

BLAST of CmoCh11G020540 vs. TAIR 10
Match: AT2G43000.1 (NAC domain containing protein 42 )

HSP 1 Score: 242.7 bits (618), Expect = 4.2e-64
Identity = 120/181 (66.30%), Postives = 139/181 (76.80%), Query Frame = 0


Query: 8   EGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVG 67
           E E+E PLPGFRFHPTDEEL+ +YLR KVE + I+L LIKQ+DIYK++PWDLP  SS VG
Sbjct: 12  EEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSS-VG 71

Query: 68  DKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRG 127
           +KEWYF+C RGRKY+NS+RPNRVTGSGFWKATGIDKPVYSN     +C+GLKK+LVYY G
Sbjct: 72  EKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN----LDCVGLKKSLVYYLG 131

Query: 128 SAGKGTKTYWMMHEFRLPPSNSYNI-AQEANSSLISMIVFVCMHKEIWTLCRIFKRNMSC 187
           SAGKGTKT WMMHEFRLP +   +  AQ+A               E+WTLCRIFKR  S 
Sbjct: 132 SAGKGTKTDWMMHEFRLPSTTKTDSPAQQA---------------EVWTLCRIFKRVTSQ 172

[Close]

BLAST of CmoCh11G020540 vs. TAIR 10
Match: AT3G12910.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 229.6 bits (584), Expect = 3.7e-60
Identity = 119/209 (56.94%), Postives = 141/209 (67.46%), Query Frame = 0


Query: 2   DTPQVCEGEDEIPLPGFRFHPTDEELVSFYLRGKV--EKRGIRLGLIKQMDIYKHNPWDL 61
           D  +  E ED + LPGFRFHPTDEELV +YL  KV  +K      ++ Q+DIYK +PWDL
Sbjct: 9   DNTRESEDEDALKLPGFRFHPTDEELVGYYLSKKVLLKKTSKIDEIVSQIDIYKFDPWDL 68

Query: 62  PYGSSNVGDKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLK 121
           P   S   +KE YF+CKRGRKY+NSIRPNRVTGSGFWKATGIDKPVYS+ G     IGLK
Sbjct: 69  P--RSRNTEKESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSD-GSNKAVIGLK 128

Query: 122 KTLVYYRGSAGKGTKTYWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRI 181
           KTLVYY GSAGKG KT WMMHEFRLP +N        +S+     +   +H E+WTLCRI
Sbjct: 129 KTLVYYLGSAGKGNKTDWMMHEFRLPTANDTIPGGPTHSNPTPTSL---LHAEVWTLCRI 188

Query: 182 FKRNMSCRRYGSNWNKQAPTKNPLTDQKN 209
           FKR +S R+Y  +W + A  K     Q N
Sbjct: 189 FKRTVSSRKYTPDWRELANGKRVKQQQSN 211

[Close]

BLAST of CmoCh11G020540 vs. TAIR 10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 211.8 bits (538), Expect = 8.0e-55
Identity = 111/243 (45.68%), Postives = 150/243 (61.73%), Query Frame = 0


Query: 11  DEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVGDKE 70
           +++ LPGFRFHPTDEELVSFYL+ KV+   + + LI+Q+DIYK++PWDLP   +  G+KE
Sbjct: 20  EDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP-KFAMTGEKE 79

Query: 71  WYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRGSAG 130
           WYFYC R RKY+NS RPNRVTG+GFWKATG D+P+YS+  EG++CIGLKK+LV+Y+G A 
Sbjct: 80  WYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSS--EGNKCIGLKKSLVFYKGRAA 139

Query: 131 KGTKTYWMMHEFRLPP-SNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIFKR--NMSCR 190
           KG KT WMMHEFRLP  S     ++    S +S         + W +CRIFK+    + R
Sbjct: 140 KGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVS-------PNDSWAICRIFKKTNTTTLR 199

Query: 191 RYGSNWNKQAPTKNPLTDQKNTKLCNEQVMGSGEV----SYNNWSCESMIVQNEQKAVVP 247
               ++    P +       N K  N     S ++    S+  +  E+M       +  P
Sbjct: 200 ALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKILKPSSHFQFHHENMNTPKTSNSTTP 252

[Close]

BLAST of CmoCh11G020540 vs. TAIR 10
Match: AT5G39820.1 (NAC domain containing protein 94 )

HSP 1 Score: 207.2 bits (526), Expect = 2.0e-53
Identity = 102/184 (55.43%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 8   EGEDEIPLPGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVG 67
           E  D++ LPGFRFHPTDEELVSFYL+ KV  + +   LIK++DIYK++PWDLP  ++ +G
Sbjct: 14  ERYDDVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAA-MG 73

Query: 68  DKEWYFYCKRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRG 127
           +KEWYFYC R RKY+NS RPNRVTG GFWKATG D+P+YS   + + CIGLKK+LV+YRG
Sbjct: 74  EKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSL--DSTRCIGLKKSLVFYRG 133

Query: 128 SAGKGTKTYWMMHEFRLPP---------SNSYNIAQEANSSLISMIVFVCMHKEIWTLCR 183
            A KG KT WMMHEFRLP           N  N  Q  N++  S  +      + W +CR
Sbjct: 134 RAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKEL---PSNDAWAICR 191

[Close]

BLAST of CmoCh11G020540 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-43
Identity = 80/170 (47.06%), Postives = 108/170 (63.53%), Query Frame = 0


Query: 16  PGFRFHPTDEELVSFYLRGKVEKRGIRLGLIKQMDIYKHNPWDLPYGSSNVGDKEWYFYC 75
           PGFRFHPTDEELV  YL+ K +   + + +I  +D+YK +PW+LP   ++ G++EWYF+ 
Sbjct: 19  PGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELP-AKASFGEQEWYFFS 78

Query: 76  KRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSNGGEGSECIGLKKTLVYYRGSAGKGTKT 135
            R RKY N  RPNR   SG+WKATG DKPV S GG GS+ +G+KK LV+Y G   KG K+
Sbjct: 79  PRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKS 138

Query: 136 YWMMHEFRLPPSNSYNIAQEANSSLISMIVFVCMHKEIWTLCRIFKRNMS 186
            W+MHE+RL  +   +I    N           +  + W LCRI+K+N S
Sbjct: 139 DWIMHEYRLTDNKPTHICDFGNKK-------NSLRLDDWVLCRIYKKNNS 180

The following BLAST results are available for this feature:

BLAST of CmoCh11G020540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK55	5.9e-63	66.30	Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana OX=3702 GN=JUB1 PE=1 ...	[more]
Q9ZVH0	1.1e-53	45.68	Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1	[more]
Q9FIW5	2.8e-52	55.43	Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANA...	[more]
Q9ZNU2	3.4e-42	47.06	NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ...	[more]
Q9ZVP8	1.1e-40	47.98	NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 ...	[more]

BLAST of CmoCh11G020540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER43	7.0e-184	95.40	transcription factor JUNGBRUNNEN 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JEU8	1.5e-173	91.95	transcription factor JUNGBRUNNEN 1-like isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1JP97	2.3e-166	91.91	transcription factor JUNGBRUNNEN 1-like isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1GLV8	4.4e-117	68.85	transcription factor JUNGBRUNNEN 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1HZZ9	1.8e-115	68.22	transcription factor JUNGBRUNNEN 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]

BLAST of CmoCh11G020540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43000.1	4.2e-64	66.30	NAC domain containing protein 42	[more]
AT3G12910.1	3.7e-60	56.94	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT1G26870.1	8.0e-55	45.68	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT5G39820.1	2.0e-53	55.43	NAC domain containing protein 94	[more]
AT1G52880.1	2.4e-43	47.06	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 16..144 e-value: 1.3E-33 score: 116.6
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 14..182 score: 50.366318
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 23..186 e-value: 1.8E-50 score: 172.7
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 15..182
None	No IPR available	PANTHER	PTHR31744:SF65	CONTAINING PROTEIN 9, PUTATIVE, EXPRESSED-RELATED	coord: 8..308
None	No IPR available	PANTHER	PTHR31744	PROTEIN CUP-SHAPED COTYLEDON 2-RELATED	coord: 8..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G020540.1	CmoCh11G020540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding