CmoCh11G020270 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G020270
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Actin-related protein 2/3 complex subunit
Location	Cmo_Chr11: 13818251 .. 13823481 (+)
RNA-Seq Expression	CmoCh11G020270
Synteny	CmoCh11G020270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTGCTGGTTTTCGCCATGGTCGCTTTCCTTTTTGGATCGCATTCGTATTTCTGAGATCTCCCTCGCGCGCGCCTGTATTTCTCAACCGCAAACCAAATTCACCGAGAAGCTGGAATTTCGAGCCGTCGTTGATTCCTGAGAATTTCCAATATTCTCTACTGGAGCCGGGAAAACAATGACAGCAATTGCAGTTCACGGGTTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTAGTAATTAACCCTTCTCTTTTTGCTCGCTTTCTTTATTTTGTCTTTCTGTTTTCTGCGGGAGAAATGGGATGGATATGTCGAGTTTTCTGTAATTTGTTTGTCCTCAGTTCAGGAAAAAGTTGAACCAAAATACTTAGACGTGGATTTTATATATTGAGATCGTGTATCTATGTTTCCTGAGCTATCAAAGAGAGGGCAATGATATCAATTCAGCTGAGCGATCTAGATTTACTTTGCTTTATTGATGAATGATGGGAAGAACGCCAGGATAGGTTACTTGGGCTCAACCTCCGCCCAGTTGAAAATACGATAACCAATATGTTTTATGGGGTAGGATACATGCTAGTTATGCTGTTGACTAGCTTCACGAGATCTGTTTACTGATCTGATCATTCTGGGAATAACCAATATGTCTTATGGGGTAGGATACATGCTAAAATTCATGGAGAAATGGGCTGTTATCGAATCGGCTGCTAAGTTTTTCAGGTCACCCGGGGGACATTCGTTTGTTACTTTGTTACTTCAATGCTCTCCATTGTCTAATAATCAAAAGGACGATTTTATTCAATTGTTGTTTAGATTCATCAACTGACTGTGCTTATGCTAATGTTCTTGATATGTTTTATAGTGGTTGCATTTTGTCCCAACAACAATGAAGTTCACATTTATAAATCAGTACAAGACAACTGGGAGAGAATACATGTTCTTCAAAAGGTGCCTTTTAACTTTACTGTTTCCATTTATAACTTATGAGAAAATATGAAACCTAAGGTCACTGCATTTATCTATTCATGATCGATTTTTTTTGTTTTCATTCCAATCTTTTGAGTTAGGTTAAGTGAAATCTTTCTAATGAAGGCATGTTGTTAATGTCTATTAATTTATCTACTTTGTCTGTGTCAGCACGATCAAATTATCTCTGGGATAGACTGGAGTGTGAAGTCAAACAGAATTGTGACTGCATCACATGATCGAAATTCGTAAGTGTTATCTCATATTCTTGTTTTTTTTGGTCCAGTTATTTGTACGTTCACTGGTTTCTTATCTTTTCTCTTTTTTTCACTCCAGTTATCACCCCTTCCTTCCCCCAGCCTCTTCTGGCCTCTCTCAGATAATATTTTGGGAATTTTATTTATTTATATGTTCCACATTGGCCTACCAATTTCTTTTCTTTCTAGATATGTTTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCAGTGGAGTCCAAAAGGTAGTGCAAAATGTCCTACCCTGCTCTTGCTCATCACTTATGTTATCCACATCATCCTTAAATTTCTACGTTTTGCATTATCCATCTTACCCCTAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAACAATTGGTATGGCTCTTTCTCACTTTTTGTTCAAGTCATCGTATCTATTGCCTTTATTTTACATGAAGATGGAAACTCTGCTAGATGATGAATTTATTGCTAATATTTCTTATCTGTAATCTTTTTGTTTCTTTGGCTTTGTAATCAATGCTTTAGTTTATTTTTGAATCATAATTAATTCTTATCAGAAATGAAATAACTCTTTATCATTGCTTCACCTAGTATGCTTACGCATTAGTTTTCCATATTTAACATGATCATGGTTTACCTTCCACAGGTGGGTCAGTAAACTTCTCAGGAAAAGGCATGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATGTTTGTTTTACCCTTCTTTCCACCGTTTCATATGAATTTATATGGACAAATTTTTTGATCTTTTTAGAAGATTTCCAGTTATATCTTAGTGCTTGCTTGTCACTTTTTCTGAGCAAATTATGGCTGTGTTTTTCGGTTATGAATTTTCCCTTATATTTTATTCACAGCTTCTTCTTGCAACAACCTCAACGGATGGAAAATGTCGAATATTTTCCACCTTCATTAAAGGTGTTGACACAAAGTATGTAGAGAGTAGTTTAGACTGCAGTCTTCTCATGAAATATTATAGGACTGATTTAGAAGTTACTGATGCTTGATTGAAATTTCACAGGGATTCAAAAGCCGGCGCATTTTCAGATTCAAAATTCGGAGAGGTTTAATATTCAGACTTTTAATTTGCAGTGAACAAGATTTCTTGTGCTTGGAAGAGTAGAATGCTTAAATTGTTTTTTATAAAATAACTAAAAGTGTTTTTGGATTGTCATCCTTTGGTTCAAATTTAAATGATTTGAATTTCTCCCTTTGAAAAAGACATGGTTCAGTATCTTTGTCCACAGTTGCTCTCTACTTTGACGAGCAAAGTAGTTCCTATTATTTATGAGCAATTTCTTTTGGTGAATTAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAAAACCTTAGCTTATGCAGGTTAGAAGTATCTCCTCTCTGCAAATTATTTACAGAGACAACTTTATAAGTTACAACTACAGCATATGGAATAGCAACAAGTTTGAATTTACAGAGACAAGTTTGAATTGTCTAATACATTTGCTTCTTATAGTCATACTGCCTTCCTTATAAATTGGGTAAGTTTTTTTTTCATAAACATTATGGATAATACATCCATTTTATAAATTTCAATCATCAATGAAATCGTCTCTCGTCAAAAAAAAAAAAAAAAAAAGTTCATTGGTTAGCTTCCTATAACTTTTTACTTAACAATTGTAACTATGAAATTTCCCCCATTATTTTAGTTACCTTTTGTTTGGGGCGTTGAAAGCAATTTATAGGATTCAACTAGAGTCTCATTTTTTATGCTCTTGTTTAGATGGTGGTTTATTTGTACTCTACTGAAGTTTTTTTTTTTTTTTTTTTAATAATTTAAATGCTGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAATTGGTCCTTCCCCTCTAGCCCAGAATGTTGCACTTCGAGATTTGCCTCTTCGTGATGTGGGTCAGCATCCATTTTTCTTTACTCTTTGAGTATTTCTTATAATTATTTAAATACAATGTACTATTTCGCTTTCTAATCTTGAAGTTTTTTTGGATCAATATAACACTCTTTCAGATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGTGAGCTAAGCTTTAAATAGATTGTGTTATCTTTAAGATATTATAATATTTTAAGGAATATGTAAAGTGATTTATCTGCTTTCCTTCCCCTCACCACAACTAGGAGCTTTATAAGATTTCTTGGTGAAAGGAAACCAGCTTCAGCTTCAAAATATGGATCCCAGGTATTGCATCGCTTTAACTTTGTCGGTTAACAATTATTTTACAACTTAAGCTGGAAACAGAATGCATTGTCTACTGGCTGAATGCTTAGTAATTTTATGTATCTTTTTAGTTAGGTCTGCAGACGGCCTGATCTAAATGGGTCGTTGACTGTTCAGTTGTTCCACCCTGTCTGAATGCTCAGGTCCCAGTACTCCATACTGGGATTGACGGGGCTGCAAGTATATGGACTTAGCTTGACTTTGAATATTGGTTTCCCTGTCATTTTTAATAATATACATAAATTTGAAAATTTGAAAATAGAGTATCGAATGAAACAATGATTTAGAAAAAAGTGTCTAGAAAAACAAACAAAAATAATAAATATTTGAAAAGAAAAAAAAGATCATTTAAATAAAGATCAATACAAAGGCTAGTGCCCTTTGCCAGTTGGTTTAACTTTCATGGCTATTCTCCACATCTTGTTCATCAACTAATAGACTTTGCCAGTTGGTTTAACTCGCATGCTGAATTTGTGAAACGCCTTTTTTTCTCAATCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGGCAATGAATCAGTTGAATCTTCAAGATTGCGCGGAATTGTCCACGAGAATTGCATAAAGTATGTAGTTATTGAATATATTTTCTGTAGCTTCTACTTGGTTGATTTTGTGAATTACTCTGATTTCCGGGAGGAAGCCCCATATCCACTTAATTATTTGCTTATCTAGAGAGCCATTTGTAATCTGAGCGAATTAGCAAAAAGTGGGTATGGACATGGGGTGGCCTTCACATTGTTAAATGTGCATGACGTAATGATTTGTTTTTGAACTGTAGTTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGTTTGTTAAAAGGAAGAGATATTGAACAAATCTTAGTCCTTCATTTTTATTTATGAACAAGATCTGTTGTGTGTCCTTAAGTTCTGAAGCCTTCATTTTCATGTCACGAAAATTATCGAAACTTATGAGAAGGCTGGTTTTAATGGAAGCTATTTGCCCTGACCTTACAGGCTTGGATGGAAAAGTTGCTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGAACCTTGATTCATTAACTTTCTCACTACCATGTAAAGAATCTTGCTCTCGGCAGAGTCACATGCCTTGTGTATCATAGCAGCTGTGAGGAACTGATTGCCTCTTCTTCTTGTAGCAGACAAGCGAGTTTGATTTTGTGTATGTACGCATTTTCAGCTAAAATTTTGCTCTTAGAGATTTCATACACATCATTGGAGTTCAATCACTCTCATTTAGGTCTCAATCTATGTTCAGACTATTGGTTTTACGTCTTCTATAATGTTCTCTCTCTCTCGAAATACTTCGTGTCTTTTCATACTCTGTGCTGTTTGTGTTTGATATGAAAATATCAAGATTAAACTCAGGCATGAACACAGACTATACTGCAAAGAGTTGTAGTACTTGTTGTAGTTCAAATTGTGGGTGCCAAATGAAGAAAGACGAG

mRNA sequence

GGCTGCTGGTTTTCGCCATGGTCGCTTTCCTTTTTGGATCGCATTCGTATTTCTGAGATCTCCCTCGCGCGCGCCTGTATTTCTCAACCGCAAACCAAATTCACCGAGAAGCTGGAATTTCGAGCCGTCGTTGATTCCTGAGAATTTCCAATATTCTCTACTGGAGCCGGGAAAACAATGACAGCAATTGCAGTTCACGGGTTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTATGGTTGCATTTTGTCCCAACAACAATGAAGTTCACATTTATAAATCAGTACAAGACAACTGGGAGAGAATACATGTTCTTCAAAAGCACGATCAAATTATCTCTGGGATAGACTGGAGTGTGAAGTCAAACAGAATTGTGACTGCATCACATGATCGAAATTCATATGTTTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCAGTGGAGTCCAAAAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAACAATTGGTGGGTCAGTAAACTTCTCAGGAAAAGGCATGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATCTTCTTCTTGCAACAACCTCAACGGATGGAAAATGTCGAATATTTTCCACCTTCATTAAAGGTGTTGACACAAAGGATTCAAAAGCCGGCGCATTTTCAGATTCAAAATTCGGAGAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAAAACCTTAGCTTATGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAATTGGTCCTTCCCCTCTAGCCCAGAATGTTGCACTTCGAGATTTGCCTCTTCGTGATATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAAAGGAAACCAGCTTCAGCTTCAAAATATGGATCCCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGGCAATGAATCAGTTGAATCTTCAAGATTGCGCGGAATTGTCCACGAGAATTGCATAAATTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGCTTGGATGGAAAAGTTGCTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGAACCTTGATTCATTAACTTTCTCACTACCATGTAAAGAATCTTGCTCTCGGCAGAGTCACATGCCTTGTGTATCATAGCAGCTGTGAGGAACTGATTGCCTCTTCTTCTTGTAGCAGACAAGCGAGTTTGATTTTGTGTATGTACGCATTTTCAGCTAAAATTTTGCTCTTAGAGATTTCATACACATCATTGGAGTTCAATCACTCTCATTTAGGTCTCAATCTATGTTCAGACTATTGGTTTTACGTCTTCTATAATGTTCTCTCTCTCTCGAAATACTTCGTGTCTTTTCATACTCTGTGCTGTTTGTGTTTGATATGAAAATATCAAGATTAAACTCAGGCATGAACACAGACTATACTGCAAAGAGTTGTAGTACTTGTTGTAGTTCAAATTGTGGGTGCCAAATGAAGAAAGACGAG

Coding sequence (CDS)

ATGACAGCAATTGCAGTTCACGGGTTCGCTCAGTGCATCACTTGCCATGCTTGGAGTCCTGATCACTCTATGGTTGCATTTTGTCCCAACAACAATGAAGTTCACATTTATAAATCAGTACAAGACAACTGGGAGAGAATACATGTTCTTCAAAAGCACGATCAAATTATCTCTGGGATAGACTGGAGTGTGAAGTCAAACAGAATTGTGACTGCATCACATGATCGAAATTCATATGTTTGGAACCTTGAAGGATCAGAATGGGTACCAACTCTTGTCATTCTTAGACTAAACCGTGCTGCACTTTGTGTTCAGTGGAGTCCAAAAGAAAACAAGTTTGCTGTTGGAAGTGGGGCAAAAACTGTTTGCATATGCTACTATGAACAAGAGAACAATTGGTGGGTCAGTAAACTTCTCAGGAAAAGGCATGATTCTTCTGTGACAAATGTCGCTTGGCATCCCAATAATCTTCTTCTTGCAACAACCTCAACGGATGGAAAATGTCGAATATTTTCCACCTTCATTAAAGGTGTTGACACAAAGGATTCAAAAGCCGGCGCATTTTCAGATTCAAAATTCGGAGAGTTAATTGTTCAGCTCGATCTCTCATTCTCTTGGGCATTTGGCGTGAAGTGGTCACCAAGTGGCAAAACCTTAGCTTATGCAGGTCACAATTCGATGATTTACTTTGTTGATGAAATTGGTCCTTCCCCTCTAGCCCAGAATGTTGCACTTCGAGATTTGCCTCTTCGTGATATACTATTTGTTAGTGAGAGAATGGTTATAGGTGTAGGATTCGATTGCAATCCTATGGTTTTTGCTGCTGATGAAAGAGGGATCTGGAGCTTTATAAGATTTCTTGGTGAAAGGAAACCAGCTTCAGCTTCAAAATATGGATCCCAGTTTTCAGAAGCATTTGGGAAGTTATATGGTCAACCGAGGCAAGGTGTTGGCAATGAATCAGTTGAATCTTCAAGATTGCGCGGAATTGTCCACGAGAATTGCATAAATTGTATTGTGCCTCTTAGAGAGCGAAGGGTTTCCACTATAAAGAGATTCAGCACTTCAGGCTTGGATGGAAAAGTTGCTATTTGGGACTTGGAGGGCCAGGCTGATCTATCTCAATACTTGTGA

Protein sequence

MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGIDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLAQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGSQFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGKVAIWDLEGQADLSQYL

Homology

[Close]

BLAST of CmoCh11G020270 vs. ExPASy Swiss-Prot
Match: O80856 (Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=ARPC1A PE=2 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 1.3e-173
Identity = 288/371 (77.63%), Postives = 328/371 (88.41%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 301 GSQFSEAFGKLYG-QPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSG 360
            SQFSEAFGK YG Q +    N++ ES   RG VH+NCIN IV L +     + RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSG 360

Query: 361 LDGKVAIWDLE 369
           LDGKVAIWDLE
Sbjct: 361 LDGKVAIWDLE 368

[Close]

BLAST of CmoCh11G020270 vs. ExPASy Swiss-Prot
Match: Q9SJW6 (Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=ARPC1B PE=2 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 2.4e-172
Identity = 286/371 (77.09%), Postives = 327/371 (88.14%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFAAD+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSY 300

Query: 301 GSQFSEAFGKLYG-QPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSG 360
            SQFSEAFGK YG Q +    N++ +S   RG VH+N I  IVPL +     + RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASDS---RGGVHDNSITSIVPLGKGGSPKVMRFSTSG 360

Query: 361 LDGKVAIWDLE 369
           LDGK+AIWDLE
Sbjct: 361 LDGKIAIWDLE 368

[Close]

BLAST of CmoCh11G020270 vs. ExPASy Swiss-Prot
Match: O96622 (Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689 GN=arcA PE=1 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.0e-90
Identity = 162/368 (44.02%), Postives = 234/368 (63.59%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           M+A  +   A CIT HAW+ D S VA CPNNNEVHIY     +W   HVL +HDQ+++ I
Sbjct: 1   MSAFEIEHLASCITAHAWNADRSRVALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DW+ K+NRI+T+S DRN+YVW  +  +W P LV+LR+NRAA  V+WSP+ENKFAV +GAK
Sbjct: 61  DWAPKTNRILTSSQDRNAYVWTFKDGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
            VCIC++E+E++WW S  + K+H S+V  V WHPNNLLLAT+S+D K R+F  +IK  D 
Sbjct: 121 LVCICFFEEEHDWWASNHI-KKHKSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADG 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           + S    + +  FGE + + D   SW   +KWSPSG TLAY+ H+ +    +     P  
Sbjct: 181 R-SVTRPYGEVAFGEPVFEFDQCASWVHALKWSPSGSTLAYSSHDGVFAVANFSTNPPTI 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300
           + + +R+LPLRD+L+++E  + GVG+DC P++   ++ G W   ++ GE   AS     +
Sbjct: 241 EKLRVRNLPLRDLLYITENSIAGVGYDCAPLLI-TNQNG-W---KYSGEMDKASEGGAAA 300

Query: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
               +  KL+ Q +  +G ES  + +    VH+NCI  IVP +      +  FSTSGLDG
Sbjct: 301 GSETSARKLF-QNKVDLG-ESKSADKKLTTVHQNCITSIVPFKSVG-GVVSDFSTSGLDG 358

Query: 361 KVAIWDLE 369
            + +W ++
Sbjct: 361 NIVVWHVK 358

[Close]

BLAST of CmoCh11G020270 vs. ExPASy Swiss-Prot
Match: Q9WV32 (Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b PE=1 SV=4)

HSP 1 Score: 298.5 bits (763), Expect = 1.1e-79
Identity = 153/373 (41.02%), Postives = 224/373 (60.05%), Query Frame = 0


Query: 4   IAVHGF-AQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGIDW 63
           +A H F  + I+CHAW+ D + +A CPNN+EVHIY+     W ++H L++H+  ++GIDW
Sbjct: 1   MAYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDW 60

Query: 64  SVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
           + +SNRIVT   DRN+YVW L+G  W PTLVILR+NRAA CV+W+P ENKFAVGSG++ +
Sbjct: 61  APESNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVI 120

Query: 124 CICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKD 183
            ICY+EQEN+WWV K ++K   S+V ++ WHPNN+LLA  S D KCRIFS +IK V+ + 
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP 180

Query: 184 SKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLAQN 243
           +     S   FGEL+ +   S  W  GV +S SG  +A+  H+S +  VD      +A  
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSASGSRVAWVSHDSTVCLVDADKKMAVA-T 240

Query: 244 VALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK-PASASKYGSQ 303
           +A   LPL  + F++E  ++  G DC P++F  D   +   + F G    P  +S+ G  
Sbjct: 241 LASETLPLLAVTFITENSLVAAGHDCFPVLFTYDNAAV--TLSFGGRLDVPKQSSQRGMT 300

Query: 304 FSEAFGKL------YGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFST 363
             E F  L       G    G G +S         +H+N ++ I  L   + +   +F T
Sbjct: 301 ARERFQNLDKKASSEGGAATGAGLDS---------LHKNSVSQISVLSGGK-AKCSQFCT 360

Query: 364 SGLDGKVAIWDLE 369
           +G+DG ++IWD++
Sbjct: 361 TGMDGGMSIWDVK 360

[Close]

BLAST of CmoCh11G020270 vs. ExPASy Swiss-Prot
Match: Q7ZXD5 (Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc1b-a PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 3.1e-79
Identity = 155/367 (42.23%), Postives = 225/367 (61.31%), Query Frame = 0


Query: 4   IAVHGF-AQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGIDW 63
           +A H F  + ITCHAW+ D + +AFCPN+++VHIYK   D W +IH L++H+  ++GIDW
Sbjct: 1   MAYHSFLLEPITCHAWNKDATQIAFCPNSHDVHIYKKDGDKWSKIHELKEHNGHVTGIDW 60

Query: 64  SVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAKTV 123
           + +SNRIVT   DRN+YVW L+ + W PTLVILR+NRAA CV+WSPKENKFAVGSG++ +
Sbjct: 61  APESNRIVTCGTDRNAYVWTLKNNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI 120

Query: 124 CICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDTKD 183
            ICY+EQEN+WWV K ++K   S+V ++ WHPNN+LLA  S+D K RIFS +IK V+ + 
Sbjct: 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSSDFKSRIFSAYIKEVEERP 180

Query: 184 SKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLAQN 243
           +     S   FGEL+ +   S  W   V +S SG  +A+  H+S I   D      +  +
Sbjct: 181 APTPWGSKMPFGELMFESSSSCGWVHSVCFSHSGDRMAWVSHDSTICISDATKKMRVT-S 240

Query: 244 VALRDLPLRDILFVSERMVIGVGFDCNPMVFAADE-RGIWSFIRFLGERKPASASKYGSQ 303
           +    LPL  + F++E  ++  G DC P+++  DE +G  SF   L    P  +S+ G  
Sbjct: 241 LITDTLPLLCVTFITENSLVAAGHDCFPVLYIYDEAQGTLSFGGKLD--IPKQSSQRGMT 300

Query: 304 FSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDGK 363
             E F  L  +      N +++S      +H+N I+ +  L   +    K F T+GLDG 
Sbjct: 301 ARERFQNLDKKASSDTNNITLDS------LHKNSISQLSVLSGGKAKCSK-FCTTGLDGG 357

Query: 364 VAIWDLE 369
           + IWD++
Sbjct: 361 MCIWDVK 357

[Close]

BLAST of CmoCh11G020270 vs. ExPASy TrEMBL
Match: A0A6J1ERW9 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111437237 PE=3 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 7.3e-225
Identity = 377/377 (100.00%), Postives = 377/377 (100.00%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 378
           KVAIWDLEGQADLSQYL
Sbjct: 361 KVAIWDLEGQADLSQYL 377

[Close]

BLAST of CmoCh11G020270 vs. ExPASy TrEMBL
Match: A0A6J1JFB5 (Actin-related protein 2/3 complex subunit OS=Cucurbita maxima OX=3661 GN=LOC111486386 PE=3 SV=1)

HSP 1 Score: 781.2 bits (2016), Expect = 2.0e-222
Identity = 373/377 (98.94%), Postives = 374/377 (99.20%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI
Sbjct: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300
           QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERK ASASKYGS
Sbjct: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKTASASKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQ VGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQDVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 378
           KV IWDLEGQADLSQYL
Sbjct: 361 KVVIWDLEGQADLSQYL 377

[Close]

BLAST of CmoCh11G020270 vs. ExPASy TrEMBL
Match: A0A1S3BM68 (Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC103491371 PE=3 SV=1)

HSP 1 Score: 753.4 bits (1944), Expect = 4.4e-214
Identity = 354/377 (93.90%), Postives = 365/377 (96.82%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDS+AG FSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSRAGTFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300
           QNVA RDLPLRDILFVSERMVIGVGFDC+PM FAADERGIWSF+RFLGERK AS SKYGS
Sbjct: 241 QNVAFRDLPLRDILFVSERMVIGVGFDCHPMAFAADERGIWSFVRFLGERKTASGSKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQPRQGVGN+SVESSRLRG VHENCINCIVPL+E  VSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPRQGVGNDSVESSRLRGCVHENCINCIVPLKEPGVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 378
           KV IWDLEGQ DLSQYL
Sbjct: 361 KVVIWDLEGQDDLSQYL 377

[Close]

BLAST of CmoCh11G020270 vs. ExPASy TrEMBL
Match: A0A6J1GLX8 (Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC111455454 PE=3 SV=1)

HSP 1 Score: 745.7 bits (1924), Expect = 9.2e-212
Identity = 352/377 (93.37%), Postives = 362/377 (96.02%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPDHSMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQ+ISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQLISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWH NNLLLATTSTDGKCRIFSTFIKGVDT
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHTNNLLLATTSTDGKCRIFSTFIKGVDT 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDS+AG FSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSRAGKFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300
           Q+VA RDLPLRDILFVSERMVIG GFDCNPM FAADERGIWSFIRFLGERK AS SKYGS
Sbjct: 241 QSVAFRDLPLRDILFVSERMVIGTGFDCNPMAFAADERGIWSFIRFLGERKTASGSKYGS 300

Query: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQ +QGVGN+SVESSRLRG VHENCI CIVPLRE  VSTIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQSKQGVGNDSVESSRLRGCVHENCITCIVPLREPGVSTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 378
           KV IWDLEGQADLSQYL
Sbjct: 361 KVVIWDLEGQADLSQYL 377

[Close]

BLAST of CmoCh11G020270 vs. ExPASy TrEMBL
Match: A0A6J1D3Z7 (Actin-related protein 2/3 complex subunit OS=Momordica charantia OX=3673 GN=LOC111016823 PE=3 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 4.6e-211
Identity = 350/377 (92.84%), Postives = 360/377 (95.49%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSVQDNWERIHVLQKHDQIISGI 60
           MTAIAVH FAQCITCHAWSPD SMVAFCPNNNEVHIYKS+QDNWER+HVLQKHDQIISGI
Sbjct: 1   MTAIAVHQFAQCITCHAWSPDRSMVAFCPNNNEVHIYKSLQDNWERVHVLQKHDQIISGI 60

Query: 61  DWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120
           DWSV+SN+IVTASHDRNSYVWNLE SEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
Sbjct: 61  DWSVRSNKIVTASHDRNSYVWNLEKSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK 120

Query: 121 TVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDT 180
           TVCICYYEQENNWWVSKL+RKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 
Sbjct: 121 TVCICYYEQENNWWVSKLIRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVDK 180

Query: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPLA 240
           KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSG TLAYAGHNSMIYFVDE+GPSPLA
Sbjct: 181 KDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGNTLAYAGHNSMIYFVDEVGPSPLA 240

Query: 241 QNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASASKYGS 300
           QNV  RDLPLRDILFVSERMVIGVG+DCNPMVFAADERGIWSFIRFLGERK  S S YGS
Sbjct: 241 QNVPFRDLPLRDILFVSERMVIGVGYDCNPMVFAADERGIWSFIRFLGERKATSGSNYGS 300

Query: 301 QFSEAFGKLYGQPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSGLDG 360
           QFSEAFGKLYGQP+ GVGN+SVESSRLRG VHENCINCIVPLRE + STIKRFSTSGLDG
Sbjct: 301 QFSEAFGKLYGQPKHGVGNDSVESSRLRGCVHENCINCIVPLREPKASTIKRFSTSGLDG 360

Query: 361 KVAIWDLEGQADLSQYL 378
           KV IWDLEGQ DLSQYL
Sbjct: 361 KVVIWDLEGQGDLSQYL 377

[Close]

BLAST of CmoCh11G020270 vs. TAIR 10
Match: AT2G30910.1 (actin-related protein C1A )

HSP 1 Score: 610.5 bits (1573), Expect = 8.9e-175
Identity = 288/371 (77.63%), Postives = 328/371 (88.41%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 301 GSQFSEAFGKLYG-QPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSG 360
            SQFSEAFGK YG Q +    N++ ES   RG VH+NCIN IV L +     + RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSG 360

Query: 361 LDGKVAIWDLE 369
           LDGKVAIWDLE
Sbjct: 361 LDGKVAIWDLE 368

[Close]

BLAST of CmoCh11G020270 vs. TAIR 10
Match: AT2G30910.3 (actin-related protein C1A )

HSP 1 Score: 610.5 bits (1573), Expect = 8.9e-175
Identity = 288/371 (77.63%), Postives = 328/371 (88.41%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNSSY 300

Query: 301 GSQFSEAFGKLYG-QPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSG 360
            SQFSEAFGK YG Q +    N++ ES   RG VH+NCIN IV L +     + RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASES---RGGVHDNCINSIVSLSKAGSPKVMRFSTSG 360

Query: 361 LDGKVAIWDLE 369
           LDGKVAIWDLE
Sbjct: 361 LDGKVAIWDLE 368

[Close]

BLAST of CmoCh11G020270 vs. TAIR 10
Match: AT2G31300.1 (actin-related protein C1B )

HSP 1 Score: 606.3 bits (1562), Expect = 1.7e-173
Identity = 286/371 (77.09%), Postives = 327/371 (88.14%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSKAGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPSPL 240
           TKDSKAG+ +++KFGE I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPSPL
Sbjct: 181 TKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPSPL 240

Query: 241 AQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-SKY 300
           AQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFAAD+ GIWSFIR++GE+K AS+ S Y
Sbjct: 241 AQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFAADDTGIWSFIRYIGEKKAASSGSSY 300

Query: 301 GSQFSEAFGKLYG-QPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFSTSG 360
            SQFSEAFGK YG Q +    N++ +S   RG VH+N I  IVPL +     + RFSTSG
Sbjct: 301 SSQFSEAFGKFYGSQSKSTTANDASDS---RGGVHDNSITSIVPLGKGGSPKVMRFSTSG 360

Query: 361 LDGKVAIWDLE 369
           LDGK+AIWDLE
Sbjct: 361 LDGKIAIWDLE 368

[Close]

BLAST of CmoCh11G020270 vs. TAIR 10
Match: AT2G30910.2 (actin-related protein C1A )

HSP 1 Score: 585.9 bits (1509), Expect = 2.4e-167
Identity = 283/373 (75.87%), Postives = 321/373 (86.06%), Query Frame = 0


Query: 1   MTAIAVHGFAQCITCHAWSPDHSMVAFCPNNNEVHIYKSV-QDNWERIHVLQKHDQIISG 60
           M  + VH FA+ ITCHAWSPD SMVA CPNN EVHIYKS+ QD+WER+HVLQKHDQI+SG
Sbjct: 1   MAVVDVHRFAESITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSG 60

Query: 61  IDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120
           IDWS KSN+IVT SHDRNSYVW+LEG+EWVPTLVILRLNRAALCVQWSPKENKFAVGSGA
Sbjct: 61  IDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVGSGA 120

Query: 121 KTVCICYYEQENNWWVSKLLRKRHDSSVTNVAWHPNNLLLATTSTDGKCRIFSTFIKGVD 180
           KTVCICYYEQENNWWVSKL+RKRH+SSVT+VAWHPNN+LLATTSTDGKCR+FSTFIKGVD
Sbjct: 121 KTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVD 180

Query: 181 TKDSK--AGAFSDSKFGELIVQLDLSFSWAFGVKWSPSGKTLAYAGHNSMIYFVDEIGPS 240
           TK +    GAF   K  + I+QLDLS+SWAFGVKWSPSG TLAY GH+SMIYFVD++GPS
Sbjct: 181 TKYAHYLNGAFFLLK--QQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIYFVDDVGPS 240

Query: 241 PLAQNVALRDLPLRDILFVSERMVIGVGFDCNPMVFAADERGIWSFIRFLGERKPASA-S 300
           PLAQ+VA RDLPLRD+LF+SE+MVIGVG+D NPMVFA+D+ GIWSFIR++GE+K AS+ S
Sbjct: 241 PLAQSVAFRDLPLRDVLFISEKMVIGVGYDSNPMVFASDDTGIWSFIRYIGEKKAASSNS 300

Query: 301 KYGSQFSEAFGKLYG-QPRQGVGNESVESSRLRGIVHENCINCIVPLRERRVSTIKRFST 360
            Y SQFSEAFGK YG Q +    N++ ES   RG VH+NCIN IV L +     + RFST
Sbjct: 301 SYSSQFSEAFGKFYGSQSKSTTANDASES---RGGVHDNCINSIVSLSKAGSPKVMRFST 360

Query: 361 SGLDGKVAIWDLE 369
           SGLDGKVAIWDLE
Sbjct: 361 SGLDGKVAIWDLE 368

[Close]

BLAST of CmoCh11G020270 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 2.5e-07
Identity = 39/133 (29.32%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 45  ERIHVLQKHDQIISGIDWSVKSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCV 104
           E +     H+  IS + +S  +  IV+AS D+   +W++E    + TL+       A CV
Sbjct: 62  EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLI--GHTNYAFCV 121

Query: 105 QWSPKENKFAVGSGAKTVCICYYEQENNWWVS--KLLR--KRHDSSVTNVAWHPNNLLLA 164
            ++P+ N    GS  +TV I        W V+  K L+    H   VT V ++ +  L+ 
Sbjct: 122 NFNPQSNMIVSGSFDETVRI--------WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 181

Query: 165 TTSTDGKCRIFST 174
           ++S DG CRI+ +
Sbjct: 182 SSSYDGLCRIWDS 184

The following BLAST results are available for this feature:

BLAST of CmoCh11G020270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80856	1.3e-173	77.63	Actin-related protein 2/3 complex subunit 1A OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SJW6	2.4e-172	77.09	Actin-related protein 2/3 complex subunit 1B OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O96622	1.0e-90	44.02	Actin-related protein 2/3 complex subunit 1 OS=Dictyostelium discoideum OX=44689...	[more]
Q9WV32	1.1e-79	41.02	Actin-related protein 2/3 complex subunit 1B OS=Mus musculus OX=10090 GN=Arpc1b ...	[more]
Q7ZXD5	3.1e-79	42.23	Actin-related protein 2/3 complex subunit 1B-A OS=Xenopus laevis OX=8355 GN=arpc...	[more]

BLAST of CmoCh11G020270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERW9	7.3e-225	100.00	Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JFB5	2.0e-222	98.94	Actin-related protein 2/3 complex subunit OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3BM68	4.4e-214	93.90	Actin-related protein 2/3 complex subunit OS=Cucumis melo OX=3656 GN=LOC10349137...	[more]
A0A6J1GLX8	9.2e-212	93.37	Actin-related protein 2/3 complex subunit OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1D3Z7	4.6e-211	92.84	Actin-related protein 2/3 complex subunit OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of CmoCh11G020270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30910.1	8.9e-175	77.63	actin-related protein C1A	[more]
AT2G30910.3	8.9e-175	77.63	actin-related protein C1A	[more]
AT2G31300.1	1.7e-173	77.09	actin-related protein C1B	[more]
AT2G30910.2	2.4e-167	75.87	actin-related protein C1A	[more]
AT3G49660.1	2.5e-07	29.32	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 2..38 e-value: 410.0 score: 0.5 coord: 87..126 e-value: 7.9 score: 11.3 coord: 193..232 e-value: 5.2 score: 12.5 coord: 320..366 e-value: 190.0 score: 2.6 coord: 43..82 e-value: 1.1E-4 score: 31.5 coord: 132..172 e-value: 1.9E-5 score: 34.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 45..82 e-value: 0.049 score: 14.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 140..172 score: 9.639578
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 50..91 score: 11.477578
IPR017383	Actin-related protein 2/3 complex subunit 1	PIRSF	PIRSF038093	ARPC1	coord: 1..371 e-value: 1.7E-145 score: 482.6
IPR017383	Actin-related protein 2/3 complex subunit 1	PANTHER	PTHR10709	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 1	coord: 1..367
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 5..376 e-value: 3.9E-136 score: 455.6
IPR024977	Anaphase-promoting complex subunit 4, WD40 domain	PFAM	PF12894	ANAPC4_WD40	coord: 104..172 e-value: 1.4E-5 score: 25.2
None	No IPR available	PANTHER	PTHR10709:SF2	ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT	coord: 1..367
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 50..84 score: 9.256512
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 69..83
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 11..372

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G020270.1	CmoCh11G020270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034314	Arp2/3 complex-mediated actin nucleation
biological_process	GO:0030833	regulation of actin filament polymerization
cellular_component	GO:0005885	Arp2/3 protein complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0015629	actin cytoskeleton
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0005515	protein binding