CmoCh11G020180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G020180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ethylene-responsive transcription factor 3-like
Location	Cmo_Chr11: 13773470 .. 13774111 (+)
RNA-Seq Expression	CmoCh11G020180
Synteny	CmoCh11G020180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGCAAGGCAGAGCCACAGATCCATTGGCGGTGGCGCAAACAGTTCATGAACCAGTTAAGGAAGTCCGATTCAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCGTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCGCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAAGTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCGGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCAGTCACTGCAGGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

mRNA sequence

ATGAGGCAAGGCAGAGCCACAGATCCATTGGCGGTGGCGCAAACAGTTCATGAACCAGTTAAGGAAGTCCGATTCAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCGTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCGCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAAGTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCGGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCAGTCACTGCAGGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

Coding sequence (CDS)

ATGAGGCAAGGCAGAGCCACAGATCCATTGGCGGTGGCGCAAACAGTTCATGAACCAGTTAAGGAAGTCCGATTCAGAGGTGTTCGGAAGCGTCCATGGGGCCGATACGCCGCCGAGATTAGAGATCCCTGGAAGAAGACACGCGTTTGGCTCGGCACCTTCGATACGGCGGAGGATGCTGCTAGAGCTTACGACGCCGCTGCTTTCTCTCTCCGCGGGCCGAAGGCGAAAACGAACTTTCCGTTGCATCCGTCGGCGATCTCTGTTCATCAGCAAATTCATTTCTCGCAGGAGCCTCATGATTCCCGCGGATTCTGCAAGATTAGCAAGTCTCCTGTCAAAAGACCTACATCGAGTAGCCTGAGTTCCACCGTGGAGTCTTTTAGCGGACCGCGGGTTTCGATTCCGGCTACATCGGTTCCGAAGCTCCGCCGGAAGTCCCTGCCTCCGGTCTCGCCCGACGATTGCCACAGCGACTGCGATTCGTCGTCTTCCGTTGTTGAGGACAGTGAGGAATATGCTCAGACGCCGTCAATTCACAAGGTGTTGCCGTTCGATCTGAATCTACCTCCTCCACTGCAGTCACTGCAGGACATCGATATATCCGGTGATGATCTTCAAGTTACTACTCTATGTTTCTGA

Protein sequence

MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF

Homology

[Close]

BLAST of CmoCh11G020180 vs. ExPASy Swiss-Prot
Match: Q9SXS8 (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.9e-52
Identity = 130/236 (55.08%), Postives = 150/236 (63.56%), Query Frame = 0


Query: 1   MRQGRATDPLAVAQTVHEP-----VKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFD 60
           MR+GRA    A A    EP      KE+RFRGVRKRPWGR+AAEIRDPWKKTRVWLGTFD
Sbjct: 1   MRRGRAA--AAPAPVTGEPNGSGGSKEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFD 60

Query: 61  TAEDAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH-----DSRGFCKISK 120
           +AEDAARAYDAAA +LRGPKAKTNFPL     + H Q +    P+     DSR + + + 
Sbjct: 61  SAEDAARAYDAAARALRGPKAKTNFPL---PYAHHHQFNQGHNPNNDPFVDSRFYPQDNP 120

Query: 121 SPVKRPTSSSLSSTVESFSGPRVSIPA----TSVPKLRRKSLPPVSPDDCHSDCDSSSSV 180
              +RPTSSS+SSTVESFSGPR   PA    T+    +    PPV PDDCHSDCDSSSSV
Sbjct: 121 IISQRPTSSSMSSTVESFSGPRPP-PAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSV 180

Query: 181 VE----------DSEEYAQTPSIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLC 213
           V+          D++  A + S  K L FDLNLPPP+      D   DDL  T LC
Sbjct: 181 VDHGDCEKENDNDNDNIASS-SFRKPLLFDLNLPPPMD-----DAGADDLHCTALC 224

[Close]

BLAST of CmoCh11G020180 vs. ExPASy Swiss-Prot
Match: O80339 (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 117/228 (51.32%), Postives = 144/228 (63.16%), Query Frame = 0


Query: 1   MRQGRATDPLA---VAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MR+GR +  +A   V   ++  VKE+RFRGVRKRPWGR+AAEIRDPWKK RVWLGTFD+A
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDAAAFSLRGPKAKTNFPLHPSA--------ISVHQQIHFSQEPH-DSRGFCKI 120
           E+AARAYD+AA +LRGPKAKTNFP+  S+          +  Q     +P  D R F   
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 SKS--PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRK--SLPPVSPDDCHSDCDSSS 180
            +    V RPTSSS+SSTVESFSGPR   P T  P   ++    PPV P+DCHSDCDSSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRTPPVVPEDCHSDCDSSS 180

Query: 181 SVVEDSEEYAQTP-SIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTL 212
           SV++D ++ A +    +    FDLN PP      D+    DDL  T L
Sbjct: 181 SVIDDDDDIASSSRRRNPPFQFDLNFPP--LDCVDLFNGADDLHCTDL 223

[Close]

BLAST of CmoCh11G020180 vs. ExPASy Swiss-Prot
Match: Q9LDE4 (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-41
Identity = 114/246 (46.34%), Postives = 145/246 (58.94%), Query Frame = 0


Query: 1   MRQGRATDPL--AVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAE 60
           MR+GR +  +  A+  T    VKE R+RGVRKRPWGR+AAEIRDP KK+RVWLGTFD+A 
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAV 60

Query: 61  DAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH---------------DSR 120
           DAARAYD AA +LRGPKAKTNFP+  S  S  Q + +    +               D R
Sbjct: 61  DAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHR 120

Query: 121 GFC------KISKSPVKRPTSSSLSSTVESFSGPR---VSIPATSVPK-----LRRKSLP 180
            +       +  +  + RP SSS+SSTV+S SGPR    +  ++SV K      R    P
Sbjct: 121 LYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTP 180

Query: 181 PVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKV-LPFDLNLPPPLQSLQDIDISG---DD 212
           PV+P+DCHSDCDSSSSV++D ++ A + S  K    FDLN PP    L  +D+     DD
Sbjct: 181 PVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPP----LDGVDLFAGGIDD 240

[Close]

BLAST of CmoCh11G020180 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 88/219 (40.18%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 2   RQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAA 61
           + G   DP    QT H   KE+R+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AA
Sbjct: 3   KMGLKPDPATTNQT-HNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 62

Query: 62  RAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRP--TSS 121
           RAYD AA   RG KAKTNFP             F++ P  S      S   +  P  T+ 
Sbjct: 63  RAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAG 122

Query: 122 SLSSTVE--------------SFSGPRVSIPATSVPKLRRKSLPPVSPD----------- 181
           ++   +E                S P   +    +  + R   PPV+             
Sbjct: 123 NVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATK 182

Query: 182 -DCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
             C +  DS SS V D E   +  S  ++L  DLNLPPP
Sbjct: 183 MACGAQSDSDSSSVVDFEGGMEKRS--QLLDLDLNLPPP 218

[Close]

BLAST of CmoCh11G020180 vs. ExPASy Swiss-Prot
Match: Q9C5I3 (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-24
Identity = 82/176 (46.59%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 23  VRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNFPL 82
           VR+RGVRKRPWGRYAAEIRDP+KK+RVWLGTFDT E+AARAYD  A   RG KAKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 83  HPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSSLSSTVESFSGPRVSIPATSV-- 142
           +                        I+   +    S S SSTVES S P +++ + SV  
Sbjct: 78  Y-----------------------NINAHCLSLTQSLSQSSTVES-SFPNLNLGSDSVSS 137

Query: 143 ----PKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
               PK++ K+   V  +   SD   SSSVV D   Y        VL  DLN PPP
Sbjct: 138 RFPFPKIQVKAGMMVFDERSESD---SSSVVMDVVRY---EGRRVVLDLDLNFPPP 163

[Close]

BLAST of CmoCh11G020180 vs. ExPASy TrEMBL
Match: A0A6J1EWR3 (ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437229 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 8.3e-117
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS
Sbjct: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH
Sbjct: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF
Sbjct: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 213

[Close]

BLAST of CmoCh11G020180 vs. ExPASy TrEMBL
Match: A0A6J1JLV3 (ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111486384 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 4.5e-115
Identity = 210/213 (98.59%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MR+GRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKIS SPVKRPTSSS
Sbjct: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISNSPVKRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH
Sbjct: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           KVLPFDLNLPPPL SLQDIDISGDDLQVTTLCF
Sbjct: 181 KVLPFDLNLPPPLPSLQDIDISGDDLQVTTLCF 213

[Close]

BLAST of CmoCh11G020180 vs. ExPASy TrEMBL
Match: A0A5D3C642 (Ethylene-responsive transcription factor 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1465G00030 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.4e-93
Identity = 175/214 (81.78%), Postives = 187/214 (87.38%), Query Frame = 0


Query: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MR+GRATDPL   ++V EPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAPESVQEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISK-SPVKRPTSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQQI FSQ+ HDS GFC+IS   PV RPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSI 180
           SLSSTVESFSGPR+SIP  SVPKLRRKS P V+PDDCHSDCDSSSSVV+DSEEYAQ+ SI
Sbjct: 121 SLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSEEYAQSSSI 180

Query: 181 HKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
            +VLPFDLNLPPPL    D+D+SGDDL  T LCF
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

[Close]

BLAST of CmoCh11G020180 vs. ExPASy TrEMBL
Match: A0A1S3BLI0 (ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC103491361 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.4e-93
Identity = 175/214 (81.78%), Postives = 187/214 (87.38%), Query Frame = 0


Query: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MR+GRATDPL   ++V EPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRATDPLTAPESVQEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISK-SPVKRPTSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQQI FSQ+ HDS GFC+IS   PV RPTSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQQIPFSQQFHDSGGFCEISNIIPVNRPTSS 120

Query: 121 SLSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSI 180
           SLSSTVESFSGPR+SIP  SVPKLRRKS P V+PDDCHSDCDSSSSVV+DSEEYAQ+ SI
Sbjct: 121 SLSSTVESFSGPRLSIPVPSVPKLRRKSQPQVAPDDCHSDCDSSSSVVDDSEEYAQSSSI 180

Query: 181 HKVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
            +VLPFDLNLPPPL    D+D+SGDDL  T LCF
Sbjct: 181 RRVLPFDLNLPPPLPPPHDVDLSGDDLHATALCF 214

[Close]

BLAST of CmoCh11G020180 vs. ExPASy TrEMBL
Match: A0A6J1GLX1 (ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111455566 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 175/213 (82.16%), Postives = 184/213 (86.38%), Query Frame = 0


Query: 1   MRQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60
           MR+GR  DPL  A+TV EP KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA
Sbjct: 1   MRRGRDMDPLMAAETVQEPDKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDA 60

Query: 61  ARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSS 120
           ARAYD AA SLRGPKAKTNFPLHPS ISVHQ+I FSQE HDS G CKIS  PV RPTSSS
Sbjct: 61  ARAYDEAALSLRGPKAKTNFPLHPSTISVHQKIPFSQEFHDSAGLCKISDIPVNRPTSSS 120

Query: 121 LSSTVESFSGPRVSIPATSVPKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIH 180
           LSSTVESFSGPRVSIPA  VPK+ R+SLP VSPDDCHSDCDSSSSVV+DSEEYA T SI 
Sbjct: 121 LSSTVESFSGPRVSIPAPLVPKICRQSLPLVSPDDCHSDCDSSSSVVDDSEEYAHTSSIR 180

Query: 181 KVLPFDLNLPPPLQSLQDIDISGDDLQVTTLCF 214
           +VLPFDLNLPPPL  L D+D+SGDDL  T LCF
Sbjct: 181 RVLPFDLNLPPPLPPLHDVDLSGDDLHATALCF 213

[Close]

BLAST of CmoCh11G020180 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 191.0 bits (484), Expect = 9.5e-49
Identity = 117/228 (51.32%), Postives = 144/228 (63.16%), Query Frame = 0


Query: 1   MRQGRATDPLA---VAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTA 60
           MR+GR +  +A   V   ++  VKE+RFRGVRKRPWGR+AAEIRDPWKK RVWLGTFD+A
Sbjct: 1   MRRGRGSSAVAGPTVVAAINGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSA 60

Query: 61  EDAARAYDAAAFSLRGPKAKTNFPLHPSA--------ISVHQQIHFSQEPH-DSRGFCKI 120
           E+AARAYD+AA +LRGPKAKTNFP+  S+          +  Q     +P  D R F   
Sbjct: 61  EEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDH 120

Query: 121 SKS--PVKRPTSSSLSSTVESFSGPRVSIPATSVPKLRRK--SLPPVSPDDCHSDCDSSS 180
            +    V RPTSSS+SSTVESFSGPR   P T  P   ++    PPV P+DCHSDCDSSS
Sbjct: 121 QQQFPIVNRPTSSSMSSTVESFSGPR---PTTMKPATTKRYPRTPPVVPEDCHSDCDSSS 180

Query: 181 SVVEDSEEYAQTP-SIHKVLPFDLNLPPPLQSLQDIDISGDDLQVTTL 212
           SV++D ++ A +    +    FDLN PP      D+    DDL  T L
Sbjct: 181 SVIDDDDDIASSSRRRNPPFQFDLNFPP--LDCVDLFNGADDLHCTDL 223

[Close]

BLAST of CmoCh11G020180 vs. TAIR 10
Match: AT3G20310.1 (ethylene response factor 7 )

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-43
Identity = 114/246 (46.34%), Postives = 145/246 (58.94%), Query Frame = 0


Query: 1   MRQGRATDPL--AVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAE 60
           MR+GR +  +  A+  T    VKE R+RGVRKRPWGR+AAEIRDP KK+RVWLGTFD+A 
Sbjct: 1   MRKGRGSSVVGPALPVTAGGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAV 60

Query: 61  DAARAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPH---------------DSR 120
           DAARAYD AA +LRGPKAKTNFP+  S  S  Q + +    +               D R
Sbjct: 61  DAARAYDTAARNLRGPKAKTNFPIDCSPSSPLQPLTYLHNQNLCSPPVIQNQIDPFMDHR 120

Query: 121 GFC------KISKSPVKRPTSSSLSSTVESFSGPR---VSIPATSVPK-----LRRKSLP 180
            +       +  +  + RP SSS+SSTV+S SGPR    +  ++SV K      R    P
Sbjct: 121 LYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRPMEAAAASSSVAKPLHAIKRYPRTP 180

Query: 181 PVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKV-LPFDLNLPPPLQSLQDIDISG---DD 212
           PV+P+DCHSDCDSSSSV++D ++ A + S  K    FDLN PP    L  +D+     DD
Sbjct: 181 PVAPEDCHSDCDSSSSVIDDGDDIASSSSRRKTPFQFDLNFPP----LDGVDLFAGGIDD 240

[Close]

BLAST of CmoCh11G020180 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 88/219 (40.18%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 2   RQGRATDPLAVAQTVHEPVKEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAA 61
           + G   DP    QT H   KE+R+RGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AA
Sbjct: 3   KMGLKPDPATTNQT-HNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAA 62

Query: 62  RAYDAAAFSLRGPKAKTNFPLHPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRP--TSS 121
           RAYD AA   RG KAKTNFP             F++ P  S      S   +  P  T+ 
Sbjct: 63  RAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAG 122

Query: 122 SLSSTVE--------------SFSGPRVSIPATSVPKLRRKSLPPVSPD----------- 181
           ++   +E                S P   +    +  + R   PPV+             
Sbjct: 123 NVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATK 182

Query: 182 -DCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
             C +  DS SS V D E   +  S  ++L  DLNLPPP
Sbjct: 183 MACGAQSDSDSSSVVDFEGGMEKRS--QLLDLDLNLPPP 218

[Close]

BLAST of CmoCh11G020180 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 114.0 bits (284), Expect = 1.5e-25
Identity = 55/70 (78.57%), Postives = 59/70 (84.29%), Query Frame = 0


Query: 21 KEVRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNF 80
          KEV FRGVRKRPWGRYAAEIRDP KKTRVWLGTFDTAE+AARAYD AA   RG KAKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 81 PLHPSAISVH 91
          PL   + +V+
Sbjct: 89 PLPGESTTVN 98

[Close]

BLAST of CmoCh11G020180 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-25
Identity = 82/176 (46.59%), Postives = 97/176 (55.11%), Query Frame = 0


Query: 23  VRFRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTAEDAARAYDAAAFSLRGPKAKTNFPL 82
           VR+RGVRKRPWGRYAAEIRDP+KK+RVWLGTFDT E+AARAYD  A   RG KAKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 83  HPSAISVHQQIHFSQEPHDSRGFCKISKSPVKRPTSSSLSSTVESFSGPRVSIPATSV-- 142
           +                        I+   +    S S SSTVES S P +++ + SV  
Sbjct: 78  Y-----------------------NINAHCLSLTQSLSQSSTVES-SFPNLNLGSDSVSS 137

Query: 143 ----PKLRRKSLPPVSPDDCHSDCDSSSSVVEDSEEYAQTPSIHKVLPFDLNLPPP 193
               PK++ K+   V  +   SD   SSSVV D   Y        VL  DLN PPP
Sbjct: 138 RFPFPKIQVKAGMMVFDERSESD---SSSVVMDVVRY---EGRRVVLDLDLNFPPP 163

The following BLAST results are available for this feature:

BLAST of CmoCh11G020180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXS8	6.9e-52	55.08	Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 ...	[more]
O80339	1.3e-47	51.32	Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9LDE4	1.1e-41	46.34	Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
O80340	1.7e-26	40.18	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9C5I3	2.7e-24	46.59	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of CmoCh11G020180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWR3	8.3e-117	100.00	ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JLV3	4.5e-115	98.59	ethylene-responsive transcription factor 3-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3C642	6.4e-93	81.78	Ethylene-responsive transcription factor 3-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BLI0	6.4e-93	81.78	ethylene-responsive transcription factor 3-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GLX1	1.1e-92	82.16	ethylene-responsive transcription factor 3-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CmoCh11G020180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50640.1	9.5e-49	51.32	ethylene responsive element binding factor 3	[more]
AT3G20310.1	7.8e-43	46.34	ethylene response factor 7	[more]
AT3G15210.1	1.2e-27	40.18	ethylene responsive element binding factor 4	[more]
AT5G44210.1	1.5e-25	78.57	erf domain protein 9	[more]
AT1G28370.1	1.9e-25	46.59	ERF domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 25..36 score: 60.91 coord: 47..63 score: 73.9
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 24..87 e-value: 1.1E-37 score: 141.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 24..73 e-value: 1.1E-14 score: 54.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 24..81 score: 23.828024
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 24..81 e-value: 1.34903E-20 score: 79.6231
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 23..83 e-value: 2.3E-28 score: 100.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..173
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 19..184
None	No IPR available	PANTHER	PTHR31677:SF157	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3	coord: 19..184
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 25..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G020180.1	CmoCh11G020180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity