CmoCh11G020070 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G020070
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 5-like
LocationCmo_Chr11: 13718861 .. 13719889 (-)
RNA-Seq ExpressionCmoCh11G020070
SyntenyCmoCh11G020070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGTTCTTCTTCAACCCCTCTCTTTTCTCTTTGCATTTCTCCCATTACTGTAACGGTCACTTCCTCTGTTCCCTCTTAAACCTCCCATTTTATTTCTCTCTCTAAAACGCCTCTCTCCTACCAATGGAGATCGATTTAGCTCTCTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAACCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCCTAGTGGCGCCTGCTACGACGCCTCCAGTGTCCAGACCATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGACAGTTGCTTCTTCCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGTCAGTTTCTTCTCCCTCCCGATCTCTCAAATTCTCCATCGAATCTTTGTTTTTCTTTCCAGATCTGTAACTCAATCGCTCATTGATTTTGATCTGTCTTGTTTCAGGCTATGGAAATTGCAGATTCCCATCTAGGTAAAAACTCTCTCCATGATCCTTAAGCACCCTGTTTCGATTTAGGGAACAATTAATGTCCGTGATCAAGAAATTAATCATCAACCGTCAACGAATCTCCGACTTTAAAGCCTTTTTTCCAGTTTTAAAGTGATCGATTTCTCTCATTTATGGCGCAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAAAACTTAATCTAGTTTTGTTGTGTTTAATTAGATTGATTGTCATTTCTGATTGGTGGGTTTGTGTATTTATATTTGAATTTTGGTTTTTATTCAGCAAATATTGGTAATTGGATGCCTT

mRNA sequence

CATGTTCTTCTTCAACCCCTCTCTTTTCTCTTTGCATTTCTCCCATTACTGTAACGGTCACTTCCTCTGTTCCCTCTTAAACCTCCCATTTTATTTCTCTCTCTAAAACGCCTCTCTCCTACCAATGGAGATCGATTTAGCTCTCTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAACCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCCTAGTGGCGCCTGCTACGACGCCTCCAGTGTCCAGACCATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGACAGTTGCTTCTTCCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGCTATGGAAATTGCAGATTCCCATCTAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAAAACTTAATCTAGTTTTGTTGTGTTTAATTAGATTGATTGTCATTTCTGATTGGTGGGTTTGTGTATTTATATTTGAATTTTGGTTTTTATTCAGCAAATATTGGTAATTGGATGCCTT

Coding sequence (CDS)

ATGGAGATCGATTTAGCTCTCTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAACCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCCTAGTGGCGCCTGCTACGACGCCTCCAGTGTCCAGACCATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGACAGTTGCTTCTTCCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGCTATGGAAATTGCAGATTCCCATCTAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA

Protein sequence

MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI
Homology
[Close]
BLAST of CmoCh11G020070 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-33
Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 0 

Query: 26  IKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFA 85
           I GQ    ELWCVAKNNA+D+SLQ+A++WACG GG+DC PIQ  G C D + VQ MASF 
Sbjct: 31  IGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFV 90

Query: 86  FNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDL 145
           FN+Y+LK+G  D++C F N+AA+TSLNPS G C++PSS   N    +  TS+G G + D+
Sbjct: 91  FNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQA-DM 150

Query: 146 SGSGRKSGRIWV 158
           S  GR     W+
Sbjct: 151 SRGGRPISSSWM 161

[Close]
BLAST of CmoCh11G020070 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 0 

Query: 34  ELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFNDYFLKH 93
           + +C+A +  D  +LQ+ALDWACG G S+CS IQP  +CY  ++V+  ASFAFN Y+ K 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 94  GMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSS---QSTSVGLGPSEDLS 147
           G    SC F+  A IT+ +PS+G+C FP S  + GN +     ST V  G +   S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGSK-KVGNRTQTVVNSTEVAAGEATSRS 493

[Close]
BLAST of CmoCh11G020070 vs. ExPASy Swiss-Prot
Match: Q8VYE5 (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-17
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 0 

Query: 28  GQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFN 87
           G GG T+ WC+A + A    LQ+ALDWACG G  DCS +QP   C++  +V + AS+AFN
Sbjct: 383 GGGGGTKKWCIASSQASVTELQTALDWACGPGNVDCSAVQPDQPCFEPDTVLSHASYAFN 442

Query: 88  DYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNG 129
            Y+ + G +   C F  ++     +PSYGNC +  +   +G
Sbjct: 443 TYYQQSGASSIDCSFNGASVEVDKDPSYGNCLYMIAPATDG 483

[Close]
BLAST of CmoCh11G020070 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.8e-17
Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 0 

Query: 30  GGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFNDY 89
           G  +  WCV K    D+ LQ  LD+ACG  G+DC+P  P G+C++  +V+   ++A N +
Sbjct: 15  GHTSASWCVCKTGLSDSVLQKTLDYACG-NGADCNPTHPKGSCFNPDNVRAHCNYAVNSF 74

Query: 90  FLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLG 141
           F K G   +SC F  +A +T+ +PSY  C FPSS+  +G+  S ST+V  G
Sbjct: 75  FQKKGQASESCNFTGTATLTTTDPSYTGCAFPSSA--SGSSGSGSTTVTPG 122

[Close]
BLAST of CmoCh11G020070 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16
Identity = 49/121 (40.50%), Postives = 65/121 (53.72%), Query Frame = 0 

Query: 17  SAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDAS 76
           S++  Q PS K        WCV K  A +  LQ++LDWACG  G DC  IQP GAC++ +
Sbjct: 348 SSSSSQTPSGKVTSSG---WCVPKKGATNEELQASLDWACG-HGIDCGAIQPGGACFEPN 407

Query: 77  SVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTS 136
           +V + A++A N YF K       C F  +A +TS NPSY NC +P      G     S +
Sbjct: 408 NVVSHAAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGGGGGGGGGGGSKA 464

Query: 137 V 138
           V
Sbjct: 468 V 464

[Close]
BLAST of CmoCh11G020070 vs. ExPASy TrEMBL
Match: A0A6J1EY09 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437228 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 2.6e-92
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 

Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 174
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 173

[Close]
BLAST of CmoCh11G020070 vs. ExPASy TrEMBL
Match: A0A6J1ES45 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437228 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.2e-87
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0 

Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYL 166
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG +
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGLM 165

[Close]
BLAST of CmoCh11G020070 vs. ExPASy TrEMBL
Match: A0A6J1ERW0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111437228 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 5.5e-87
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF
Sbjct: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG 164
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG 163

[Close]
BLAST of CmoCh11G020070 vs. ExPASy TrEMBL
Match: A0A6J1JNE0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 161/173 (93.06%), Postives = 167/173 (96.53%), Query Frame = 0 

Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           M I+ ALFLLI  I+CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MPINFALFLLIVPILCSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           +DCSPIQPSGACYDAS+VQ MASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPSYGNCRF
Sbjct: 61  ADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI 174
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGR+S RIWVWPIAIGYLFFKIMFLI
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPIAIGYLFFKIMFLI 173

[Close]
BLAST of CmoCh11G020070 vs. ExPASy TrEMBL
Match: A0A6J1JLF2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486269 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 151/163 (92.64%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60
           M I+ ALFLLI  I+CSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG
Sbjct: 1   MPINFALFLLIVPILCSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGG 60

Query: 61  SDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRF 120
           +DCSPIQPSGACYDAS+VQ MASFAFNDYFLKHGMTDDSCFFQNSAA+TSLNPSYGNCRF
Sbjct: 61  ADCSPIQPSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAVTSLNPSYGNCRF 120

Query: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIG 164
           PSSSLRNGNFSSQSTSVGLGPSEDLSGSGR+S RIWVWPIAIG
Sbjct: 121 PSSSLRNGNFSSQSTSVGLGPSEDLSGSGRRSSRIWVWPIAIG 163

[Close]
BLAST of CmoCh11G020070 vs. TAIR 10
Match: AT3G58100.1 (plasmodesmata callose-binding protein 5 )

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 71/132 (53.79%), Postives = 92/132 (69.70%), Query Frame = 0 

Query: 26  IKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFA 85
           I GQ    ELWCVAKNNA+D+SLQ+A++WACG GG+DC PIQ  G C D + VQ MASF 
Sbjct: 31  IGGQVIQVELWCVAKNNAEDSSLQTAIEWACGQGGADCGPIQQGGPCNDPTDVQKMASFV 90

Query: 86  FNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDL 145
           FN+Y+LK+G  D++C F N+AA+TSLNPS G C++PSS   N    +  TS+G G + D+
Sbjct: 91  FNNYYLKNGEEDEACNFNNNAALTSLNPSQGTCKYPSSKGANNGRLADDTSMGAGQA-DM 150

Query: 146 SGSGRKSGRIWV 158
           S  GR     W+
Sbjct: 151 SRGGRPISSSWM 161

[Close]
BLAST of CmoCh11G020070 vs. TAIR 10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 6.8e-21
Identity = 50/97 (51.55%), Postives = 64/97 (65.98%), Query Frame = 0 

Query: 28  GQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFN 87
           G G  +  WC+AK NA   SLQ ALD+ACG GG+DC  IQ   ACY+ ++++  ASFAFN
Sbjct: 140 GGGVGSGQWCIAKANASPTSLQVALDYACGYGGADCGQIQQGAACYEPNTIRDHASFAFN 199

Query: 88  DYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSS 125
            Y+ KH    DSC F  +A +TS +PS G+C F SSS
Sbjct: 200 SYYQKH-PGSDSCNFGGAAQLTSTDPSKGSCHFSSSS 235

[Close]
BLAST of CmoCh11G020070 vs. TAIR 10
Match: AT4G13600.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 6.8e-21
Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 0 

Query: 8   FLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQ 67
           FLL+ L   SAA               +WCVA+ +    +LQ+ALD+AC A G+DC+PIQ
Sbjct: 48  FLLLLLFRSSAA---------------MWCVARFDVTSQALQAALDYAC-AAGADCAPIQ 107

Query: 68  PSGACYDASSVQTMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRN 127
           P+G C+  ++VQ  AS+AFN YF +  M   SC F  ++ I   +PSYG+C +P +S+RN
Sbjct: 108 PNGLCFLPNTVQAHASYAFNSYFQRAAMAPGSCNFAGTSTIAKTDPSYGSCVYP-NSVRN 167

Query: 128 GNFSSQSTSVGLGPSEDLSGS 149
              S+ +T+VG  PS  +  S
Sbjct: 168 AGGSASTTTVGGTPSTTVGNS 171

[Close]
BLAST of CmoCh11G020070 vs. TAIR 10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.4e-20
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 0 

Query: 36  WCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFNDYFLKHGM 95
           WCVA  +A +  LQ  LD+ACG GG+DC PIQP   CY   +++  ASFAFN Y+ K G 
Sbjct: 384 WCVANGDAGEERLQGGLDYACGEGGADCRPIQPGANCYSPDTLEAHASFAFNSYYQKKGR 443

Query: 96  TDDSCFFQNSAAITSLNPSYGNCRFPS 123
              SC+F  +A + S  P YG C FP+
Sbjct: 444 AGGSCYFGGAAYVVSQPPKYGRCEFPT 470

[Close]
BLAST of CmoCh11G020070 vs. TAIR 10
Match: AT1G11820.2 (O-Glycosyl hydrolases family 17 protein )

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 51/116 (43.97%), Postives = 71/116 (61.21%), Query Frame = 0 

Query: 34  ELWCVAKNNADDASLQSALDWACGAGGSDCSPIQPSGACYDASSVQTMASFAFNDYFLKH 93
           + +C+A +  D  +LQ+ALDWACG G S+CS IQP  +CY  ++V+  ASFAFN Y+ K 
Sbjct: 379 QTYCIAMDGVDAKTLQAALDWACGPGRSNCSEIQPGESCYQPNNVKGHASFAFNSYYQKE 438

Query: 94  GMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSS---QSTSVGLGPSEDLS 147
           G    SC F+  A IT+ +PS+G+C FP S  + GN +     ST V  G +   S
Sbjct: 439 GRASGSCDFKGVAMITTTDPSHGSCIFPGSK-KVGNRTQTVVNSTEVAAGEATSRS 493

The following BLAST results are available for this feature:
BLAST of CmoCh11G020070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M2K61.5e-3353.79PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5... [more]
O653992.4e-1843.97Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 ... [more]
Q8VYE51.2e-1740.59Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana OX=3702 GN=At4g29360... [more]
Q9SD845.8e-1740.54PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2... [more]
Q9M0691.7e-1640.50Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 ... [more]
BLAST of CmoCh11G020070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EY092.6e-92100.00PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita moschata OX... [more]
A0A6J1ES454.2e-8798.79PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita moschata OX... [more]
A0A6J1ERW05.5e-87100.00PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 OS=Cucurbita moschata OX... [more]
A0A6J1JNE01.2e-8693.06PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 OS=Cucurbita maxima OX=3... [more]
A0A6J1JLF22.7e-8192.64PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 OS=Cucurbita maxima OX=3... [more]
BLAST of CmoCh11G020070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G58100.11.1e-3453.79plasmodesmata callose-binding protein 5 [more]
AT1G29380.16.8e-2151.55Carbohydrate-binding X8 domain superfamily protein [more]
AT4G13600.16.8e-2141.13Carbohydrate-binding X8 domain superfamily protein [more]
AT2G05790.13.4e-2048.28O-Glycosyl hydrolases family 17 protein [more]
AT1G11820.21.7e-1943.97O-Glycosyl hydrolases family 17 protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainSMARTSM00768X8_clscoord: 35..120
e-value: 2.3E-40
score: 150.1
IPR012946X8 domainPFAMPF07983X8coord: 35..106
e-value: 6.4E-19
score: 68.4
NoneNo IPR availableGENE3D1.20.58.1040coord: 31..134
e-value: 3.8E-11
score: 45.2
NoneNo IPR availablePANTHERPTHR31044:SF80PLASMODESMATA CALLOSE-BINDING PROTEIN 5coord: 6..152
IPR044788Carbohydrate-binding X8 domain-containing protein, plantPANTHERPTHR31044BETA-1,3 GLUCANASEcoord: 6..152

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G020070.1CmoCh11G020070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009506 plasmodesma