CmoCh11G019980 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G019980
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Location	Cmo_Chr11: 13685266 .. 13686635 (+)
RNA-Seq Expression	CmoCh11G019980
Synteny	CmoCh11G019980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATGTTCAGGTAGATTATATATTGTTTATCTCTTCTTCTTTTATTATTTTATTATCTTATTTTTATCGGAGTTCACGATTGTGTGGCACTCACTCCCAACACTGAGTGGGTCAAACCAATTTATATTCGCGTCACCTCCGACCAGAGGAATTTTTATTTTTATTTTTATTTTTATTTTGCAGTTTCTATCATATCTCGGAGAAATTTGGACTTTAGGTAAGCCCAATTAACCTAAGAGCGTAAACTTGGGCTTTTTACCATACCATTTCTGGCCCATTTGGCCAACCAAGTCCAGCTAAACTCTCCGGTAGGATTGGGCTTTGAACTTGGGCTTTTATCGTACCATTTCTGGCCCATTGGGCCACCAGTCCAGCTAAACTCTCCGGTAGGATTGGGCTTTAAACTTGGGCTTTTACCGTACAATTTCTGGCCCATTTGGCCAACCAAGTCCAGCTAAACTCTCCGGAAGGATTGGGCTTTTTACCGTACCATTTCTGGCCCAGTTGACCAACCAAGTCTAACTAAACTCCCAGTAGAATTGGGGTTTAACCTTGTTCTTTATAGCCCATTTGAAAAAGAAGCTCAACTTTAGGCCCACTATCCTACCGGCGGCGCCTTCCCTTACCTCCACTCTCGGCTGCCATTCAGTTAGTGTTGCAGGCTCCAGCTCGTGAATCATTGAATCAATGAGTGGCATAGTAAATATGTGATTATGGTTCAAACCCTAGTCTCCGCGAGCTCGCTCTCTGTATACCGAAGCTTCATTTCTGCACGAAATCGCATTTCGCGAGGCATCTACTTGGTGATTTCTCACTATTTCCTTCTCTTTCACTCTCGGCAGCCTTTACAGGTTCGAGTTTTTCTTGTTTGATCTCATGGCGTAATTATAGTATCATGGTTGTGTTCATGGTGTTCTGTCTCTGTCTCTACTCATAGTTTGTTGGAGGCATAAGGTCTTTTATTAGTTTTTTTGGAGATCATAGTTAAATTCCTTTGCGTATTGCAGTGCACTTTGGTATTTCAGAAAAGTTCAATTTCTGCTTTTCTCTTCTTTGATTTTGTTGAGAGATTGAGAATATTGAAGGATAAGTTGGTTGGCTTTTCTTATGAATTAGAATATGTCGTGTTTCTACCCTCGGGTTTTATATTGGTGAAACATTAAGGGGAAGCTCGAAAGGAAAAGCCCAAATTGGACTTAGGCTGTTACATACACACACCTATTTTATTTGAATGTTGGCCTCGGATACTGTTTGACATAGCTTCGTTCGAGTTTGCTTTGTATCAGCTGTCAAACCTGAAACCAAACCACAGAAGAGCTTCAGTTCTAATAATGAAGCTTTACAGTCAAGCCCCCTCATGCATTAA

mRNA sequence

ATGCAGATGTTCAGTCTCCGCGAGCTCGCTCTCTGTATACCGAAGCTTCATTTCTGCACGAAATCGCATTTCGCGAGGCATCTACTTGGTGATTTCTCACTATTTCCTTCTCTTTCACTCTCGGCAGCCTTTACAGCTGTCAAACCTGAAACCAAACCACAGAAGAGCTTCAGTTCTAATAATGAAGCTTTACAGTCAAGCCCCCTCATGCATTAA

Coding sequence (CDS)

ATGCAGATGTTCAGTCTCCGCGAGCTCGCTCTCTGTATACCGAAGCTTCATTTCTGCACGAAATCGCATTTCGCGAGGCATCTACTTGGTGATTTCTCACTATTTCCTTCTCTTTCACTCTCGGCAGCCTTTACAGCTGTCAAACCTGAAACCAAACCACAGAAGAGCTTCAGTTCTAATAATGAAGCTTTACAGTCAAGCCCCCTCATGCATTAA

Protein sequence

MQMFSLRELALCIPKLHFCTKSHFARHLLGDFSLFPSLSLSAAFTAVKPETKPQKSFSSNNEALQSSPLMH

Homology

The following BLAST results are available for this feature:

BLAST of CmoCh11G019980 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G019980 vs.


Match Name	E-value	Identity	Description

BLAST of CmoCh11G019980 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G019980.1	CmoCh11G019980.1	mRNA