CmoCh11G019390 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G019390
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Lipoyl synthase, mitochondrial
Location	Cmo_Chr11: 13408996 .. 13411053 (+)
RNA-Seq Expression	CmoCh11G019390
Synteny	CmoCh11G019390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCCCGTCGCCATAGCCTTGCTCGAATCTTCGAATCCGTTGGCAGATCCTTATCATATTCATCTTCCTCGACCTCCGCCTCTGCTACCTCCTCCCAAGTCCCTCGGACTTTGGCCGGACTCCGGGAACGACTTGCTGCCGAATCCCCCACGCTTTCTGACTTCGTCGGCCTGAAATCTTCTGATTCGTATTCCGTGGAGGTTGGTACGAAGAAGAAGCCCCTTCCTAAGCCTAAATGGATGAAGGAATCGGTGCCCGGTGGCGAGAAGTATGTTCAAATCAAGAAGAAACTCCGCGAATTGAAGCTTCATACGGTTTGTGAGGAGGCTAAATGCCCTAATTTGGGGGAATGCTGGTCTGGTGGAGAAACCGGCACGGCCACTGCTACGATTATGATTCTTGGCGACACTTGTACCCGGGGATGCAGGCTAGTCATAATTCAATTTACTCATTCATTTCGTTGTGTTTACTTAATTTCCAGTGTTTTTGATGATTGAAGAATGATATCTTCTCGTGTGTGCTGTGCATAGTGTATATCATTTACTGAGGAATGTGAATCTCTAATTGTTTTTGTCATAGAATTGATCTTGTTGATTAGTATGATATCATCTAATCACTTAGAATTCTTTTCATTCCTTGCTATTTTGGGATTATTTGCACTCCAGGTTCTGTAACGTGAAGACATCACGAACTCCACCTCCACCAGACCCCAATGAGCCGCAAAATGTTGCTGAGGCAATCGCATCATGGGGGTTGGATTATGTGGTTATCACTAGTGTGGATCGCGACGATTTACCTGATCAGGGGAGTGGTCATTTTGCAGAGACCGTGCAGAAACTCAAGGTGTTGAAGCCAAATATGTTGATCGAAGCGTTGGGTATGAATTCCCTAGCAGTTTCCTTAGTGTCACGTTCCTTGTTACATTTAAGGATTCTTGTGTGACACTTGATTTTTGGGAGAGTTATTCTATCTTGTTTTCATCCAATCCAGCTTAGAAAGTTAGTGAAAGCTACATACTTACCCGTGTGTATGTGCAGTCACAAAAATCAGCATCATAGGCTCGTTTGATTCTGATTACTTTTGTCCAGTATGATTTAATCTGTTCTTTGATGTTCCTTGAACTAATTGATTTTGCAGTCCCTGATTTTCGAGGAGACCCTGGCAGTGTAGAGAAAGTTGCAAAGTCGGGCCTTGACGTCTTTGCTCATAATATAGAGACAGTTGAAGAGCTTCAGGGAGCAGTTCGGGACCATCGTGCTAATTTTAAGCAATCATTAGATGTTCTAGTTATGGCAAAAGAGTTTGCTCCTTCTGGAACACTTACGAAGACTTCCATTATGTTAGGCTGTGGGGAAACACCAGATCAAGTCGTGCAAACAATGGAGAAGGTGAGAGCTGCTGGAGTTGATGTGATGACATTTGGTCAGTACATGAGACCTTCAAAGCGTCATATGCCTGTATCAGAATACATTACACCTGAGGCTTTCGAGAAGTATCACAATCTTGGCATGAAAATGGTACTCTCTTTTTTTATTTGAACATTTTGTTTGCGTTTATTCTCTTCTTTGTTCTGCAAAGGATTGTTTAATCAAGTCTTTAAAGGTTAAAGACTACTTTTTTTTTTTCATTTCTAGTATGGTATCATATTCCCATCTTTGTTATTCTTATAGCTCGCGAATAGTCTTGATTTGCATTTCCTATACCATCCCATCTTCCATTTCAACCATTGTAGTTTGATGTGTATTATATTCAAATTGTTCGAGGGAGTCGATGCTTTACTTTTAGGTATATTAGTTCATGTTGTGATGCATAATCCTCATCTCCACCATCAAGTATCACATGATCAATAGTTCTCAATGTATGGAGTTACTTGCCATGCCTTGAGGATACAACAATGATTTGAAAATCCATTTTCTGTTTGGTTGTGACAGGGTTTTCGGTACGTGGCATCTGGCCCAATGGTTAGGTCCTCATACAAGGCAGGAGAATTCTATATCAAGTCAATGATTGAATCAGATCGGGCAGCTTCTAGTTCACATCCTACACAAGCTTGA

mRNA sequence

ATGAACGCCCGTCGCCATAGCCTTGCTCGAATCTTCGAATCCGTTGGCAGATCCTTATCATATTCATCTTCCTCGACCTCCGCCTCTGCTACCTCCTCCCAAGTCCCTCGGACTTTGGCCGGACTCCGGGAACGACTTGCTGCCGAATCCCCCACGCTTTCTGACTTCGTCGGCCTGAAATCTTCTGATTCGTATTCCGTGGAGGTTGGTACGAAGAAGAAGCCCCTTCCTAAGCCTAAATGGATGAAGGAATCGGTGCCCGGTGGCGAGAAGTATGTTCAAATCAAGAAGAAACTCCGCGAATTGAAGCTTCATACGGTTTGTGAGGAGGCTAAATGCCCTAATTTGGGGGAATGCTGGTCTGGTGGAGAAACCGGCACGGCCACTGCTACGATTATGATTCTTGGCGACACTTGTACCCGGGGATGCAGGCTAGTCATAATTCAATTTACTCATTCATTTCGTTGTGTTTACTTAATTTCCAGTAATTCTTTTCATTCCTTGCTATTTTGGGATTATTTGCACTCCAGGTTCTGTAACGTGAAGACATCACGAACTCCACCTCCACCAGACCCCAATGAGCCGCAAAATGTTGCTGAGGCAATCGCATCATGGGGGTTGGATTATGTGGTTATCACTAGTGTGGATCGCGACGATTTACCTGATCAGGGGAGTGGTCATTTTGCAGAGACCGTGCAGAAACTCAAGGTGTTGAAGCCAAATATGTTGATCGAAGCGTTGGTCCCTGATTTTCGAGGAGACCCTGGCAGTGTAGAGAAAGTTGCAAAGTCGGGCCTTGACGTCTTTGCTCATAATATAGAGACAGTTGAAGAGCTTCAGGGAGCAGTTCGGGACCATCGTGCTAATTTTAAGCAATCATTAGATGTTCTAGTTATGGCAAAAGAGTTTGCTCCTTCTGGAACACTTACGAAGACTTCCATTATGTTAGGCTGTGGGGAAACACCAGATCAAGTCGTGCAAACAATGGAGAAGGTGAGAGCTGCTGGAGTTGATGTGATGACATTTGGTCAGTACATGAGACCTTCAAAGCGTCATATGCCTGTATCAGAATACATTACACCTGAGGCTTTCGAGAAGTATCACAATCTTGGCATGAAAATGGGTTTTCGGTACGTGGCATCTGGCCCAATGGTTAGGTCCTCATACAAGGCAGGAGAATTCTATATCAAGTCAATGATTGAATCAGATCGGGCAGCTTCTAGTTCACATCCTACACAAGCTTGA

Coding sequence (CDS)

ATGAACGCCCGTCGCCATAGCCTTGCTCGAATCTTCGAATCCGTTGGCAGATCCTTATCATATTCATCTTCCTCGACCTCCGCCTCTGCTACCTCCTCCCAAGTCCCTCGGACTTTGGCCGGACTCCGGGAACGACTTGCTGCCGAATCCCCCACGCTTTCTGACTTCGTCGGCCTGAAATCTTCTGATTCGTATTCCGTGGAGGTTGGTACGAAGAAGAAGCCCCTTCCTAAGCCTAAATGGATGAAGGAATCGGTGCCCGGTGGCGAGAAGTATGTTCAAATCAAGAAGAAACTCCGCGAATTGAAGCTTCATACGGTTTGTGAGGAGGCTAAATGCCCTAATTTGGGGGAATGCTGGTCTGGTGGAGAAACCGGCACGGCCACTGCTACGATTATGATTCTTGGCGACACTTGTACCCGGGGATGCAGGCTAGTCATAATTCAATTTACTCATTCATTTCGTTGTGTTTACTTAATTTCCAGTAATTCTTTTCATTCCTTGCTATTTTGGGATTATTTGCACTCCAGGTTCTGTAACGTGAAGACATCACGAACTCCACCTCCACCAGACCCCAATGAGCCGCAAAATGTTGCTGAGGCAATCGCATCATGGGGGTTGGATTATGTGGTTATCACTAGTGTGGATCGCGACGATTTACCTGATCAGGGGAGTGGTCATTTTGCAGAGACCGTGCAGAAACTCAAGGTGTTGAAGCCAAATATGTTGATCGAAGCGTTGGTCCCTGATTTTCGAGGAGACCCTGGCAGTGTAGAGAAAGTTGCAAAGTCGGGCCTTGACGTCTTTGCTCATAATATAGAGACAGTTGAAGAGCTTCAGGGAGCAGTTCGGGACCATCGTGCTAATTTTAAGCAATCATTAGATGTTCTAGTTATGGCAAAAGAGTTTGCTCCTTCTGGAACACTTACGAAGACTTCCATTATGTTAGGCTGTGGGGAAACACCAGATCAAGTCGTGCAAACAATGGAGAAGGTGAGAGCTGCTGGAGTTGATGTGATGACATTTGGTCAGTACATGAGACCTTCAAAGCGTCATATGCCTGTATCAGAATACATTACACCTGAGGCTTTCGAGAAGTATCACAATCTTGGCATGAAAATGGGTTTTCGGTACGTGGCATCTGGCCCAATGGTTAGGTCCTCATACAAGGCAGGAGAATTCTATATCAAGTCAATGATTGAATCAGATCGGGCAGCTTCTAGTTCACATCCTACACAAGCTTGA

Protein sequence

MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLKSSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCNVKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMAKEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQA

Homology

[Close]

BLAST of CmoCh11G019390 vs. ExPASy Swiss-Prot
Match: Q3LSN5 (Lipoyl synthase 2, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-2 PE=2 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 6.6e-176
Identity = 315/408 (77.21%), Postives = 344/408 (84.31%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           M +R  ++A       + LS SS++T+ ++  S++ + LA LR RLA ESP+LSDF+ LK
Sbjct: 2   MYSRFRTVAGNLNCAAKRLSSSSTTTTTTSAPSELQQNLAALRARLAMESPSLSDFISLK 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           S ++YSVEVGTKKKPLPKPKWMKES+PGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 62  SDNAYSVEVGTKKKPLPKPKWMKESIPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 122 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 181

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDP+EP NVAEAIASWGLDYVVITSVDRDDLPDQGSGHF ETVQKLK LKP
Sbjct: 182 VKTSRTPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFTETVQKLKALKP 241

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           +MLIEALVPDFRG+   VEKV+KSGLDVFAHNIETVEELQ AVRDHRANFKQSLDVL+MA
Sbjct: 242 SMLIEALVPDFRGNAECVEKVSKSGLDVFAHNIETVEELQSAVRDHRANFKQSLDVLMMA 301

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KE+AP+GTLTKTSIMLGCGETPDQ+V+TMEKVRAAGVDVMTFGQ+MRPSKRHMPVSEYIT
Sbjct: 302 KEYAPAGTLTKTSIMLGCGETPDQIVKTMEKVRAAGVDVMTFGQHMRPSKRHMPVSEYIT 361

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASS 409
           PEAFEKY  LGM+MGFRYVASGPMVRSSYKAGEFYIKSMI+SDRAASS
Sbjct: 362 PEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIDSDRAASS 376

[Close]

BLAST of CmoCh11G019390 vs. ExPASy Swiss-Prot
Match: Q3LSN4 (Lipoyl synthase 1, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-1 PE=2 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 8.6e-176
Identity = 315/408 (77.21%), Postives = 343/408 (84.07%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           M +R  ++A       + LS SS++T+ ++  S++ + LA LR RLA ESP+LSDF+ LK
Sbjct: 2   MYSRFRTVAGNLNCAAKRLSSSSTTTTTTSAPSELQQNLAALRARLAMESPSLSDFISLK 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           S ++YSVEVGTKKKPLPKPKWMKES+PGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 62  SDNAYSVEVGTKKKPLPKPKWMKESIPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 122 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 181

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDP+EP NVAEAIASWGLDYVVITSVDRDDLPDQGSGHF ETVQKLK LKP
Sbjct: 182 VKTSRTPPPPDPDEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFTETVQKLKALKP 241

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           + LIEALVPDFRG+   VEKV+KSGLDVFAHNIETVEELQ AVRDHRANFKQSLDVL+MA
Sbjct: 242 STLIEALVPDFRGNAECVEKVSKSGLDVFAHNIETVEELQSAVRDHRANFKQSLDVLMMA 301

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KE+AP+GTLTKTSIMLGCGETPDQ+V+TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 302 KEYAPAGTLTKTSIMLGCGETPDQIVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 361

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASS 409
           PEAFEKY  LGM+MGFRYVASGPMVRSSYKAGEFYIKSMI+SDRAASS
Sbjct: 362 PEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIDSDRAASS 376

[Close]

BLAST of CmoCh11G019390 vs. ExPASy Swiss-Prot
Match: B9H5L9 (Lipoyl synthase, mitochondrial OS=Populus trichocarpa OX=3694 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 5.6e-175
Identity = 315/391 (80.56%), Postives = 333/391 (85.17%), Query Frame = 0


Query: 23  SSSTSASATSS--QVPRTLAGLRERLAAESPTLSDFVGLKSSDSYSVEVGTKKKPLPKPK 82
           SSST  S+T    Q  +TLAGLR RLA ESPTLSDF+ L+S+++YSVEVGTKKKPLPKPK
Sbjct: 26  SSSTVESSTKQPPQFSQTLAGLRARLAVESPTLSDFIHLQSNNTYSVEVGTKKKPLPKPK 85

Query: 83  WMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCT 142
           WM+E++PGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCT
Sbjct: 86  WMREAIPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCT 145

Query: 143 RGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCNVKTSRTPPPPDPNEPQNVAE 202
           RGC                                 RFCNVKTSRTPPPPDPNEP NVAE
Sbjct: 146 RGC---------------------------------RFCNVKTSRTPPPPDPNEPTNVAE 205

Query: 203 AIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDPGSVEK 262
           AIASWGLDYVVITSVDRDDL DQGSGHFAETV KLK LKPNMLIEALVPDFRGD G VEK
Sbjct: 206 AIASWGLDYVVITSVDRDDLADQGSGHFAETVHKLKTLKPNMLIEALVPDFRGDRGCVEK 265

Query: 263 VAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMAKEFAPSGTLTKTSIMLGCGE 322
           VAKSGLDVFAHNIETVEELQ +VRDHRANFKQSLDVL+MAKE+AP GTLTKTSIMLGCGE
Sbjct: 266 VAKSGLDVFAHNIETVEELQSSVRDHRANFKQSLDVLMMAKEYAPPGTLTKTSIMLGCGE 325

Query: 323 TPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYHNLGMKMGFRYVA 382
            P+QVV+TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITP+AFEKY  LGM+MGFRYVA
Sbjct: 326 APEQVVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPDAFEKYKTLGMEMGFRYVA 383

Query: 383 SGPMVRSSYKAGEFYIKSMIESDRAASSSHP 412
           SGPMVRSSYKAGEFYIKSMIESDR+ SS  P
Sbjct: 386 SGPMVRSSYKAGEFYIKSMIESDRSVSSQLP 383

[Close]

BLAST of CmoCh11G019390 vs. ExPASy Swiss-Prot
Match: B7FM45 (Lipoyl synthase, mitochondrial OS=Medicago truncatula OX=3880 GN=LIP1 PE=2 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 2.6e-172
Identity = 306/408 (75.00%), Postives = 342/408 (83.82%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           M +R  ++A+  +S  +  S+++++T+ + +SS+ P+ L  LR RLA ESP+LSDF+ LK
Sbjct: 2   MYSRFRTVAKNLKSTTKPFSFTTATTTTTVSSSEFPQNLTELRARLARESPSLSDFISLK 61

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           S+++YSVEVGTKK PLPKPKWMKES+PGG KYVQIKKKLRELKLHTVCEEAKCPN+GECW
Sbjct: 62  SNNAYSVEVGTKKNPLPKPKWMKESIPGGWKYVQIKKKLRELKLHTVCEEAKCPNMGECW 121

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 122 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 181

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDP+EP NVAEAIASWGLDYVVITSV RDDLPDQGS HF ETVQKLK+LKP
Sbjct: 182 VKTSRTPPPPDPDEPTNVAEAIASWGLDYVVITSVGRDDLPDQGSSHFTETVQKLKILKP 241

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           ++LIEALVPDFRG+   VEKV+KSGLDVFAHNIETVEELQ AVRDHRANF QSLDVL MA
Sbjct: 242 SILIEALVPDFRGNAECVEKVSKSGLDVFAHNIETVEELQSAVRDHRANFNQSLDVLRMA 301

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           K++AP+GTLTKTSIMLGCGETPDQ+V+TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 302 KDYAPAGTLTKTSIMLGCGETPDQIVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 361

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASS 409
           PEAFEKY  LGM+MGFRYVASGPMVRSSYKAGEFYIKSMI+SDRA SS
Sbjct: 362 PEAFEKYQTLGMEMGFRYVASGPMVRSSYKAGEFYIKSMIDSDRAVSS 376

[Close]

BLAST of CmoCh11G019390 vs. ExPASy Swiss-Prot
Match: A5CB81 (Lipoyl synthase, mitochondrial OS=Vitis vinifera OX=29760 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 7.6e-172
Identity = 307/388 (79.12%), Postives = 329/388 (84.79%), Query Frame = 0


Query: 27  SASATSSQVPRTLAGLRERLAAESPTLSDFVGLKSSDSYSVEVGTKKKPLPKPKWMKESV 86
           S+  T+ + P+TLA LR RLA ESP+LSDFV L++SD YSVEVGTKKKPL KPKWMKES+
Sbjct: 34  SSPPTNPEPPQTLASLRHRLAVESPSLSDFVRLQTSDDYSVEVGTKKKPLSKPKWMKESI 93

Query: 87  PGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRLV 146
           PGG KY QIKKKLR+L LHTVCEEA+CPN+GECWSGGETGTATATIMILGDTCTRGC   
Sbjct: 94  PGGAKYTQIKKKLRQLNLHTVCEEARCPNMGECWSGGETGTATATIMILGDTCTRGC--- 153

Query: 147 IIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCNVKTSRTPPPPDPNEPQNVAEAIASWG 206
                                         RFCNVKTSRTPPPPDP+EP  VAEAIASWG
Sbjct: 154 ------------------------------RFCNVKTSRTPPPPDPDEPSKVAEAIASWG 213

Query: 207 LDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDPGSVEKVAKSGL 266
           LDYVVITSVDRDDLPDQGSGHFAETVQKLK+LKPNMLIEALVPDFRGDPG VEKV+KSGL
Sbjct: 214 LDYVVITSVDRDDLPDQGSGHFAETVQKLKILKPNMLIEALVPDFRGDPGCVEKVSKSGL 273

Query: 267 DVFAHNIETVEELQGAVRDHRANFKQSLDVLVMAKEFAPSGTLTKTSIMLGCGETPDQVV 326
           DVFAHNIETVEELQ AVRDHRANFKQSL+VL +AKE+A +GTLTKTSIMLGCGETPDQVV
Sbjct: 274 DVFAHNIETVEELQSAVRDHRANFKQSLEVLKLAKEYADAGTLTKTSIMLGCGETPDQVV 333

Query: 327 QTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYHNLGMKMGFRYVASGPMVR 386
           +TMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKY  LGM MGFRYVASGPMVR
Sbjct: 334 RTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYRILGMDMGFRYVASGPMVR 388

Query: 387 SSYKAGEFYIKSMIESDRAAS--SSHPT 413
           SSYKAGEFYIKSMI++DRA S  SS P+
Sbjct: 394 SSYKAGEFYIKSMIDADRAMSWASSSPS 388

[Close]

BLAST of CmoCh11G019390 vs. ExPASy TrEMBL
Match: A0A6J1ERM2 (Lipoyl synthase, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437162 PE=3 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 9.5e-210
Identity = 381/414 (92.03%), Postives = 381/414 (92.03%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK
Sbjct: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 121 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 180

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP
Sbjct: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA
Sbjct: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQA 415
           PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQA
Sbjct: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQA 381

[Close]

BLAST of CmoCh11G019390 vs. ExPASy TrEMBL
Match: A0A6J1JNE9 (Lipoyl synthase, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486046 PE=3 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 7.5e-207
Identity = 375/413 (90.80%), Postives = 377/413 (91.28%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           MN RRHSLARIFES+GRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFV LK
Sbjct: 1   MNTRRHSLARIFESIGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVSLK 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 121 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 180

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETV KLKVLKP
Sbjct: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVLKLKVLKP 240

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA
Sbjct: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQ 414
           PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAAS+SHPTQ
Sbjct: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNSHPTQ 380

[Close]

BLAST of CmoCh11G019390 vs. ExPASy TrEMBL
Match: A0A5A7SKJ1 (Lipoyl synthase, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1 PE=3 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 4.6e-196
Identity = 360/413 (87.17%), Postives = 366/413 (88.62%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           MN R  SLARI +SV RS S SSSSTSASATSSQ PRTLAGLRERLAAESP+LSDFV L+
Sbjct: 1   MNKRCQSLARILKSVSRSFSSSSSSTSASATSSQFPRTLAGLRERLAAESPSLSDFVDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 121 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 180

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDPNEP NVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP
Sbjct: 181 VKTSRTPPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           NMLIEALVPDFRGD G VEKVA+SGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA
Sbjct: 241 NMLIEALVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KEF+PSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 301 KEFSPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQ 414
           PEAFEKY NLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAAS+S PTQ
Sbjct: 361 PEAFEKYQNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNSQPTQ 380

[Close]

BLAST of CmoCh11G019390 vs. ExPASy TrEMBL
Match: A0A1S4E162 (Lipoyl synthase, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495529 PE=3 SV=1)

HSP 1 Score: 693.7 bits (1789), Expect = 4.6e-196
Identity = 360/413 (87.17%), Postives = 366/413 (88.62%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           MN R  SLARI +SV RS S SSSSTSASATSSQ PRTLAGLRERLAAESP+LSDFV L+
Sbjct: 1   MNKRCQSLARILKSVSRSFSSSSSSTSASATSSQFPRTLAGLRERLAAESPSLSDFVDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW
Sbjct: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 121 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 180

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDPNEP NVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP
Sbjct: 181 VKTSRTPPPPDPNEPTNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           NMLIEALVPDFRGD G VEKVA+SGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA
Sbjct: 241 NMLIEALVPDFRGDSGCVEKVARSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KEF+PSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 301 KEFSPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQ 414
           PEAFEKY NLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAAS+S PTQ
Sbjct: 361 PEAFEKYQNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASNSQPTQ 380

[Close]

BLAST of CmoCh11G019390 vs. ExPASy TrEMBL
Match: A0A6J1GL74 (Lipoyl synthase, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455343 PE=3 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 4.3e-194
Identity = 354/413 (85.71%), Postives = 365/413 (88.38%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           MN+   SLAR+ ESVGR  S SSSS +ASATSSQ PRTLAGLRERLA E+P+LSDF+ L+
Sbjct: 1   MNSHGRSLARLLESVGRFFSSSSSSAAASATSSQFPRTLAGLRERLAVETPSLSDFIDLQ 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
           SS+SYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEA+CPNLGECW
Sbjct: 61  SSESYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEARCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTR                                  SRFCN
Sbjct: 121 SGGETGTATATIMILGDTCTR---------------------------------VSRFCN 180

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDPNEP+NVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP
Sbjct: 181 VKTSRTPPPPDPNEPKNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
           NMLIEALVPDFRGDPG VE VAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA
Sbjct: 241 NMLIEALVPDFRGDPGCVENVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT
Sbjct: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSSHPTQ 414
           PEAFEKY NLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDR+ASSSHPTQ
Sbjct: 361 PEAFEKYQNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRSASSSHPTQ 380

[Close]

BLAST of CmoCh11G019390 vs. TAIR 10
Match: AT2G20860.1 (lipoic acid synthase 1 )

HSP 1 Score: 596.7 bits (1537), Expect = 1.5e-170
Identity = 307/409 (75.06%), Postives = 334/409 (81.66%), Query Frame = 0


Query: 1   MNARRHSLARIFESVGRSLSYSSSSTSASATSSQVPRTLAGLRERLAAESPTLSDFVGLK 60
           M++R   L R      R   +SSSS     T +Q P++L  LR RLA ESP+L+DF+   
Sbjct: 1   MHSRSALLYRFLRPASR--CFSSSSAVTPVTVTQSPKSLEALRARLANESPSLTDFI--- 60

Query: 61  SSDSYSVEVGTKKKPLPKPKWMKESVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECW 120
             D+YSVEVGTKKKPLPKPKWMKES+PGGE+YVQIKKKLR+LKLHTVCEEAKCPNLGECW
Sbjct: 61  HGDTYSVEVGTKKKPLPKPKWMKESIPGGERYVQIKKKLRDLKLHTVCEEAKCPNLGECW 120

Query: 121 SGGETGTATATIMILGDTCTRGCRLVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCN 180
           SGGETGTATATIMILGDTCTRGC                                 RFCN
Sbjct: 121 SGGETGTATATIMILGDTCTRGC---------------------------------RFCN 180

Query: 181 VKTSRTPPPPDPNEPQNVAEAIASWGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKP 240
           VKTSRTPPPPDPNEP NVAEAIASWG+DYVVITSVDRDDLPDQGSGHFAETVQ+LK LKP
Sbjct: 181 VKTSRTPPPPDPNEPNNVAEAIASWGVDYVVITSVDRDDLPDQGSGHFAETVQRLKFLKP 240

Query: 241 NMLIEALVPDFRGDPGSVEKVAKSGLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMA 300
            MLIEALVPDFRGD G VEKV+KSGLDV AHNIETVEELQ  VRDHRANFKQSLDVL MA
Sbjct: 241 EMLIEALVPDFRGDGGCVEKVSKSGLDVLAHNIETVEELQSFVRDHRANFKQSLDVLRMA 300

Query: 301 KEFAPSGTLTKTSIMLGCGETPDQVVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYIT 360
           KE+AP+GTLTKTS+MLGCGETPDQVV+TMEKVRAAGVDVMTFGQYMRPSKRHMPV+EY+T
Sbjct: 301 KEYAPAGTLTKTSVMLGCGETPDQVVKTMEKVRAAGVDVMTFGQYMRPSKRHMPVAEYVT 360

Query: 361 PEAFEKYHNLGMKMGFRYVASGPMVRSSYKAGEFYIKSMIESDRAASSS 410
           P+AFE+Y  LGM+MGFRYVASGPMVRSSYKAGE+YIKSMIE+DR AS S
Sbjct: 361 PDAFERYRLLGMEMGFRYVASGPMVRSSYKAGEYYIKSMIEADRVASPS 371

[Close]

BLAST of CmoCh11G019390 vs. TAIR 10
Match: AT5G08415.1 (Radical SAM superfamily protein )

HSP 1 Score: 362.8 bits (930), Expect = 3.6e-100
Identity = 188/385 (48.83%), Postives = 249/385 (64.68%), Query Frame = 0


Query: 42  LRERLAAESPTLSDFVGLKSSDSYSVEVGTKKKPLP-----------------KPKWMKE 101
           LR +  + S  + D   LK S    +E G K +P P                 KP W+++
Sbjct: 46  LRTKAVSLSSEMEDSSSLKKS-LMELE-GKKSEPYPGGMPKMGPFTGRDPNVKKPAWLRQ 105

Query: 102 SVPGGEKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCR 161
             P GE++ ++K+ L  L L+TVCEEA+CPN+GECW+GG  G ATATIM+LGDTCTRGC 
Sbjct: 106 KAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGECWNGGGDGVATATIMVLGDTCTRGC- 165

Query: 162 LVIIQFTHSFRCVYLISSNSFHSLLFWDYLHSRFCNVKTSRTPPPPDPNEPQNVAEAIAS 221
                                           RFC VKTSR PPPPDP EP+N A+AIAS
Sbjct: 166 --------------------------------RFCAVKTSRNPPPPDPMEPENTAKAIAS 225

Query: 222 WGLDYVVITSVDRDDLPDQGSGHFAETVQKLKVLKPNMLIEALVPDFRGDPGSVEKVAKS 281
           WG+DY+VITSVDRDD+PD GSGHFA+TV+ +K  KP+++IE L  DFRGD  +V+ +  S
Sbjct: 226 WGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHS 285

Query: 282 GLDVFAHNIETVEELQGAVRDHRANFKQSLDVLVMAKEFAPSGTLTKTSIMLGCGETPDQ 341
           GLDVFAHN+ETV+ LQ  VRD RA ++QS+ VL  AK   P G +TKTSIMLG GET ++
Sbjct: 286 GLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKP-GMITKTSIMLGLGETDEE 345

Query: 342 VVQTMEKVRAAGVDVMTFGQYMRPSKRHMPVSEYITPEAFEKYHNLGMKMGFRYVASGPM 401
           + + M  +RA  VD++T GQY++P+  H+ V EY+TPE F+ +   G  +GFRYVASGP+
Sbjct: 346 LKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPL 394

Query: 402 VRSSYKAGEFYIKSMIESDRAASSS 410
           VRSSY+AGE ++K+M++   + S S
Sbjct: 406 VRSSYRAGELFVKTMVKESYSKSLS 394

The following BLAST results are available for this feature:

BLAST of CmoCh11G019390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3LSN5	6.6e-176	77.21	Lipoyl synthase 2, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-2 PE=2 SV=1	[more]
Q3LSN4	8.6e-176	77.21	Lipoyl synthase 1, mitochondrial OS=Pisum sativum OX=3888 GN=LIP1-1 PE=2 SV=1	[more]
B9H5L9	5.6e-175	80.56	Lipoyl synthase, mitochondrial OS=Populus trichocarpa OX=3694 GN=LIP1 PE=3 SV=1	[more]
B7FM45	2.6e-172	75.00	Lipoyl synthase, mitochondrial OS=Medicago truncatula OX=3880 GN=LIP1 PE=2 SV=1	[more]
A5CB81	7.6e-172	79.12	Lipoyl synthase, mitochondrial OS=Vitis vinifera OX=29760 GN=LIP1 PE=3 SV=1	[more]

BLAST of CmoCh11G019390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERM2	9.5e-210	92.03	Lipoyl synthase, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437162 PE=...	[more]
A0A6J1JNE9	7.5e-207	90.80	Lipoyl synthase, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486046 PE=3 ...	[more]
A0A5A7SKJ1	4.6e-196	87.17	Lipoyl synthase, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1 PE...	[more]
A0A1S4E162	4.6e-196	87.17	Lipoyl synthase, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495529 PE=3 SV=1	[more]
A0A6J1GL74	4.3e-194	85.71	Lipoyl synthase, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455343 PE=...	[more]

BLAST of CmoCh11G019390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20860.1	1.5e-170	75.06	lipoic acid synthase 1	[more]
AT5G08415.1	3.6e-100	48.83	Radical SAM superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 129..369 e-value: 0.002 score: 13.7
IPR031691	Lipoyl synthase, N-terminal	PFAM	PF16881	LIAS_N	coord: 22..113 e-value: 8.8E-17 score: 61.5
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 177..385 e-value: 5.1E-10 score: 40.8
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 177..331 e-value: 1.2E-7 score: 32.2
IPR007197	Radical SAM	PROSITE	PS51918	RADICAL_SAM	coord: 151..377 score: 24.151279
IPR003698	Lipoyl synthase	PIRSF	PIRSF005963	Lipoyl_synth	coord: 20..156 e-value: 5.0E-28 score: 96.0 coord: 175..414 e-value: 1.7E-111 score: 370.6
IPR003698	Lipoyl synthase	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 33..407
IPR003698	Lipoyl synthase	HAMAP	MF_00206	Lipoyl_synth	coord: 78..405 score: 120.796005
None	No IPR available	PANTHER	PTHR10949:SF0	LIPOYL SYNTHASE, MITOCHONDRIAL	coord: 33..407
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 94..144
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 177..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G019390.1	CmoCh11G019390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0102552	lipoyl synthase activity (acting on glycine-cleavage complex H protein
molecular_function	GO:0102553	lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding