CmoCh11G018860 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G018860
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCmo_Chr11: 13124298 .. 13128539 (-)
RNA-Seq ExpressionCmoCh11G018860
SyntenyCmoCh11G018860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGCCCACCGCACCAAACCCAACGCTTATACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTTGCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTGTGAGCGATCCATTTGTGCTGACATCGTTCGTTAGCTTCTACGCGGAGCTTCGGGAATTGGGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCGTTTAACTCTTTGCTTGATGCGTTTGTCAAAAATGGAGACATGGGCTCTGCTGTTTTGAAGTTTAGGTCCATGAAAAAGCGTGATGTGGTTTCTTGGACAAGTATTGTTCATGGGTTCTGTTGGAATGGGCGATTTCTTGAGGCGATTGGGTTCTTTGAGATGATGATGATGAATGGTGAAGTGAAGCCAAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGCTGCGGAGGGAGTTCTCTGTCGTGGGAAAGAAATTCATGCTTACATTATTAGAAACGAGGGTGAGCTGAGTGTGTTTATAGGGACTGCGTTGGTGGATTTTTATGGGAAAATGGGATTGTTGGGAAGTGCAAGAACAGTTTTTAACCAAATGAAGAACAGGGAGCTCTGCGCTTGGAATGCAATGATCTCTTCCTTATCCTCCAATGGCAGAGAAAGAGAAGCATTGGAGCTATTTGCTTCAATGAAGGCTGAAGGAATACGTCCTAACGAGGTTACATTTGTTGCGATTCTTACAGCGTGTGCTCGTGGCAAGCTCGTCGAATCGGGGCTGGAGCTATTCCGATCGATGTCGAACGATTTCTCGATTGTACCAATTGCTGAGCACTATGTCTGTATGGTTGATCTCTTAGGGAAGGCAGGGCTTTTGAGAGAGGCAACTGAATTCATCGAGTCCATGCCATTTCAGCCTGATGCAACTGTTTTGGGAGCCCTTTTGAATGCTTGCAACATTCATGGAGCCACTGAACTGGGAAATGAAGTAGGAAGAAGATTGCTTGTGATGCAGCCACGACATTGCGGACGGTACGTGACTTTGGCGAGTATTAACGCCGGAGCGGAGAAGTGGAGTCATGCTGCAGTTATAAGACGAGTAATGGCCGACGCTCGGATTCAGAAGGCCCCAGCTTATAGTAGAGTAGATCCAATGCAAAATTTGGTGCCAATGTCCTCCTCTTGACGTTGAGACTACAAGGTATTTGTACATTAACTATCTATGCTTTGAGAATCTGCAGCATGAAATAGTAAAATGTACAAAACCAATCCAAGTTGATAGCTTTTACACACGGTTCAATCTGTTTTGCTTCCTTTAATGATGATTTTGGCTGTTCTTCCTTAGACCACCCAATCCCATTTATACAGCCATAAATAACATTTAGAATCTTGTGATAAGGTCGAGGCCAACTCGAGCCAACCATAACAAAGGTAATCAAGTATCTCTACAACCTCATGAAATCATCACATGTAGAAGACAAGTGGTTGGGAGCCGAATCGAAAACGAAAAGCTAAAGCTTGAGAAGTTTGGCTTCGATGAAGAGATTCAAACCGTGATAAGGTCGAGGTCAACCCGAGCCTAAAGGTAATCAAGCATCTCCACAACCTCATCAAATCATCACATGTAGAAGACAAGTGGTGGGGAGCCGAATTGAAAATGAAAGCTAAAACTTAAGAAGTTTGACATTGACAAAGGGATTCACACCGCGGTAAGGTCGAGGCCAACCCGAGCCAACCACAAGAAAGGTAATCAATCATCTCTACAACTTCATGAAATCATCACATATAGAATACTAGCGGTGGGGAGCCAAGCCAAATCGAAAACGAAAAGCTAAAACTTGAGAAGTTTAGGATCGACAAATAATGCACACAATACAACTCTTGAATTAAGATTGAATTTGTTTTTTTTTTTTCAAAGTTAAATTTTGTTATTATATCTATATTTTTCTTTTGTGAATAAATATTAAAAAACACTAATGAGTTCACGATATTATAAACCATTGTCCAGCTGTTCTAAGATAAAAAAAGAGATCTTTTTCAATAAATTTGAGAAGAGGGGGTTAGATTTGGATACTCATTAAAAGTCTGATTCTTTTCTTTGTTTGTATTAAGAGATTCGTTCCAATCACCAGTTTATTTATTCCGCTATTCACTCTCAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATCGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCCCTTCTCAGCCCGTCATCTCAATTCCCGAAGGTAACTTCAAAATTTGTTCGTTCCAATTCTCAGATCCGATTAGATCTCATCTGGGTTTCATCTGATTTCGGCGGAGATTTGTTAGTTTTGTGATTCGCTTGCTTAGATCTCGTGTTTTGGGGGTTTTCTTGTGGTTCCCTGTTCTTTGATTCTGATTATAATGTCGGTTTTATGTGATTCTAGGGTTTATGAATTTTGAAATGGTTTCTGTTTATGGATTGTGGTCTAATTGTTTATCTGATTATGTTTATCTGCAGAATTGAGGAACTCTACCTTTGCAGGTTAGTTTTACTTTCTTTCTCAAGTGATTATAATGATTCTGCTTCCTCATGACTATTGAAACAATGTAAAAGATCTCAATATATGAACTCTTCTACTGATCATGAACTAGATTGCATTGTTCTAAGAGAGCCATTGGATGATGTTTCCTCCATTTATAGGTTCTTCAATATTTTCAGTAAAAATGCCTTTCGAGGTAGGCTCGCCTTGAGTTTTTCTTAGGCTGTAACTGTGAGATCCCACATCGGTTGGAGGACGCTAGGTCCTGAAGAGAGTGGATTGTGAGAGTCCACATTGATTAGAGAAGGAAACGAAACATTCTTTTTTAAGGGTGTGGAAACTTCTCCCTAGCAGACACGTTTTAAAAGCTTGAGGGGAAGCTCAGAAGGGAAAGCCCAAAGAGGACAATATCGGCTAGCGGTGGGCTTGGGCCGTTACGGTAACTCTTGAGTTGAAGGGTGAGGCATGAAATGAAGTAGCAACATGAATGGATAAAGGAGCATGAATGATCTATCAATTTCTTTCTTAATACGTTTTAAAGTCGAGATTCACAAGTGCCTCTAGAAATAGTGTCCTATGGTAAATGTGAGGCCATAATCATGATGAACTTGAGTAGCTCGTAAGAAGCACGGACACTTTAGTTTGGTTAATAATCACGATGAACTTGAGTAGCTCGAAAGAAGCACGGACACTTAAGTTTGGTTAATAACCATGATGAACTTGAGTAGCTTGTAAGAAGCACGGACACTTCAGTTTGGTCAATAATCATGATGAACACGAGTAACGATCCAATATTTAGGTGTGGTTTAGATTTTTCTTCTTTCGACTTCCATACTTCTTCCAACGAACTGTAAATACTCGTACATTTTGTAGATTGTGTTAAGCATGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGTTAAAGGAAGCCGAAGCCTCGGAAAGTCATCGCCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAGGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAAAACAGCATCCAAGCAGAGTAACACCTCCTCCCGTCCTCGCCTTTCGTTTCATATATATATATAATTTTTTGGTAGTAACTTAAATTTCACTCGACATCCTCGAATAGATCGGAATGAACTATTTCAGGTATCTTTAGAGAATCGAAATGTCAATTACCGTTTAGTTAAGCCTATGAAAACGTTCATTAGTTGAAAGCAACTAATGTATTGATGAAGTTATGTTACTCTCATTTGTTATCTTCTTTGTGGCCTAATGGCCTCGTTCGAAACAAAATCGAAAGTTCAAGAACATGACACGTTGTTGCACCTTTTCATAGGCAATCCATAATTCTCA

mRNA sequence

ATGCTTGCCCACCGCACCAAACCCAACGCTTATACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTTGCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTGTGAGCGATCCATTTGTGCTGACATCGTTCGTTAGCTTCTACGCGGAGCTTCGGGAATTGGGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCGTTTAACTCTTTGCTTGATGCGTTTGTCAAAAATGGAGACATGGGCTCTGCTGTTTTGAAGTTTAGGTCCATGAAAAAGCGTGATGTGGTTTCTTGGACAAGTATTGTTCATGGGTTCTGTTGGAATGGGCGATTTCTTGAGGCGATTGGGTTCTTTGAGATGATGATGATGAATGGTGAAGTGAAGCCAAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGCTGCGGAGGGAGTTCTCTGTCGTGGGAAAGAAATTCATGCTTACATTATTAGAAACGAGGGTGAGCTGAGTGTGTTTATAGGGACTGCGTTGGTGGATTTTTATGGGAAAATGGGATTGTTGGGAAGTGCAAGAACAGTTTTTAACCAAATGAAGAACAGGGAGCTCTGCGCTTGGAATGCAATGATCTCTTCCTTATCCTCCAATGGCAGAGAAAGAGAAGCATTGGAGCTATTTGCTTCAATGAAGGCTGAAGGAATACGTCCTAACGAGGTTACATTTGTTGCGATTCTTACAGCGTGTGCTCGTGGCAAGCTCGTCGAATCGGGGCTGGAGCTATTCCGATCGATGTCGAACGATTTCTCGATTGTACCAATTGCTGAGCACTATGTCTGTATGGTTGATCTCTTAGGGAAGGCAGGGCTTTTGAGAGAGGCAACTGAATTCATCGAGTCCATGCCATTTCAGCCTGATGCAACTGTTTTGGGAGCCCTTTTGAATGCTTGCAACATTCATGGAGCCACTGAACTGGGAAATGAAGTAGGAAGAAGATTGCTTGTGATGCAGCCACGACATTGCGGACGGTACGTGACTTTGGCGAGTATTAACGCCGGAGCGGAGAAGTGGAGTCATGCTGCAGTTATAAGACGAACTACAAGGTCGAGGCCAACTCGAGCCAACCATAACAAAGGTAATCAAGTATCTCTACAACCTCATGAAATCATCACATGTAGAAGACAAGTGGTTGGGAGCCGAATCGAAAACGAAAAGCTAAAGCTTGAGAAGTTTGGCTTCGATGAAGAGATTCAAACCGTGATAAGGTCGAGGGATTCACACCGCGGTAAGGTCGAGGCCAACCCGAGCCAACCACAAGAAAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATCGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCCCTTCTCAGCCCGTCATCTCAATTCCCGAAGAATTGAGGAACTCTACCTTTGCAGATTGTGTTAAGCATGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGTTAAAGGAAGCCGAAGCCTCGGAAAGTCATCGCCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAGGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAAAACAGCATCCAAGCAGAGTAACACCTCCTCCCGTCCTCGCCTTTCGTTTCATATATATATATAATTTTTTGGTAGTAACTTAAATTTCACTCGACATCCTCGAATAGATCGGAATGAACTATTTCAGGTATCTTTAGAGAATCGAAATGTCAATTACCGTTTAGTTAAGCCTATGAAAACGTTCATTAGTTGAAAGCAACTAATGTATTGATGAAGTTATGTTACTCTCATTTGTTATCTTCTTTGTGGCCTAATGGCCTCGTTCGAAACAAAATCGAAAGTTCAAGAACATGACACGTTGTTGCACCTTTTCATAGGCAATCCATAATTCTCA

Coding sequence (CDS)

ATGCTTGCCCACCGCACCAAACCCAACGCTTATACTTTCCCCTCAATCATCAAATCCGCCACCATTTCTTCCCCTTTGCTGGGCAAATTGATCCACGCACATGCTGTCAAGATTGGCGTTGTGAGCGATCCATTTGTGCTGACATCGTTCGTTAGCTTCTACGCGGAGCTTCGGGAATTGGGTAATGCACGTAAGGTGTTCGATGAAATTACTGACCCTTGTATTGTTGCGTTTAACTCTTTGCTTGATGCGTTTGTCAAAAATGGAGACATGGGCTCTGCTGTTTTGAAGTTTAGGTCCATGAAAAAGCGTGATGTGGTTTCTTGGACAAGTATTGTTCATGGGTTCTGTTGGAATGGGCGATTTCTTGAGGCGATTGGGTTCTTTGAGATGATGATGATGAATGGTGAAGTGAAGCCAAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGCTGCGGAGGGAGTTCTCTGTCGTGGGAAAGAAATTCATGCTTACATTATTAGAAACGAGGGTGAGCTGAGTGTGTTTATAGGGACTGCGTTGGTGGATTTTTATGGGAAAATGGGATTGTTGGGAAGTGCAAGAACAGTTTTTAACCAAATGAAGAACAGGGAGCTCTGCGCTTGGAATGCAATGATCTCTTCCTTATCCTCCAATGGCAGAGAAAGAGAAGCATTGGAGCTATTTGCTTCAATGAAGGCTGAAGGAATACGTCCTAACGAGGTTACATTTGTTGCGATTCTTACAGCGTGTGCTCGTGGCAAGCTCGTCGAATCGGGGCTGGAGCTATTCCGATCGATGTCGAACGATTTCTCGATTGTACCAATTGCTGAGCACTATGTCTGTATGGTTGATCTCTTAGGGAAGGCAGGGCTTTTGAGAGAGGCAACTGAATTCATCGAGTCCATGCCATTTCAGCCTGATGCAACTGTTTTGGGAGCCCTTTTGAATGCTTGCAACATTCATGGAGCCACTGAACTGGGAAATGAAGTAGGAAGAAGATTGCTTGTGATGCAGCCACGACATTGCGGACGGTACGTGACTTTGGCGAGTATTAACGCCGGAGCGGAGAAGTGGAGTCATGCTGCAGTTATAAGACGAACTACAAGGTCGAGGCCAACTCGAGCCAACCATAACAAAGGTAATCAAGTATCTCTACAACCTCATGAAATCATCACATGTAGAAGACAAGTGGTTGGGAGCCGAATCGAAAACGAAAAGCTAAAGCTTGAGAAGTTTGGCTTCGATGAAGAGATTCAAACCGTGATAAGGTCGAGGGATTCACACCGCGGTAAGGTCGAGGCCAACCCGAGCCAACCACAAGAAAGTAAATCCTTTCCACTTTCTCCGATGGCAATTCAGGCGCGTTCTTGCGATCCCTCGCTCATCAAGCTTGGATTGGCTTTGATCGCCCTCTCTATCGCCGGCTACATTCTCGGCCCTCCTCTCTACTGGCATGTCAAGGAAGGTTTCGCCGTCGTTAGCCGCTCATCTTCTTCTTCCTCTTGCCCTCCTTGCTTCTGCGACTGCCCTTCTCAGCCCGTCATCTCAATTCCCGAAGAATTGAGGAACTCTACCTTTGCAGATTGTGTTAAGCATGATCCAGAAGTGAGTCAAGACACAGAGAAGAACTTCGCAGACCTATTGTTAGAGGAGCTGAAGTTAAAGGAAGCCGAAGCCTCGGAAAGTCATCGCCGTGCTGATATGGCTCTGCTCGAGGCGAAGAAGATGACATCTCAGTATCAAAAAGAAGCAGACAAGTGCAATTCTGGGATGGAAACATGTGAAGAAGCAAGAGAGAAAGCTGAAGCAGTATTAGCTGCTCAGAAGAGACTAACAGCAACATGGGAGCAAAGGGCTCGCCAAAGGGGCTGGAAAGAGGGGGCTGCTAAGTCTCGTATTCAAAAACAAGGAAATATTCAAACTGCATAA

Protein sequence

MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNGRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKWSHAAVIRRTTRSRPTRANHNKGNQVSLQPHEIITCRRQVVGSRIENEKLKLEKFGFDEEIQTVIRSRDSHRGKVEANPSQPQESKSFPLSPMAIQARSCDPSLIKLGLALIALSIAGYILGPPLYWHVKEGFAVVSRSSSSSSCPPCFCDCPSQPVISIPEELRNSTFADCVKHDPEVSQDTEKNFADLLLEELKLKEAEASESHRRADMALLEAKKMTSQYQKEADKCNSGMETCEEAREKAEAVLAAQKRLTATWEQRARQRGWKEGAAKSRIQKQGNIQTA
Homology
BLAST of CmoCh11G018860 vs. ExPASy Swiss-Prot
Match: Q9SY75 (Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E71 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.1e-106
Identity = 192/375 (51.20%), Postives = 270/375 (72.00%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATIS-SPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRE 60
           MLA   +PN  TFPS+IK+A  S S   G  +H  A+K G + DPFV TSFV FY E+ +
Sbjct: 77  MLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGD 136

Query: 61  LGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWN 120
           L ++RK+FD+I +PC+VA NSLLDA  +NG+M  A   F+ M   DVVSWT++++GF   
Sbjct: 137 LESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196

Query: 121 GRFLEAIGFFEMMMMN--GEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGE 180
           G   +A+  F  M+ N    + PNEAT+VSVLSSCAN    G+   GK+IH Y++  E  
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GKQIHGYVMSKEII 256

Query: 181 LSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASM 240
           L+  +GTAL+D YGK G L  A T+F+Q++++++CAWNA+IS+L+SNGR ++ALE+F  M
Sbjct: 257 LTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMM 316

Query: 241 KAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGL 300
           K+  + PN +T +AILTACAR KLV+ G++LF S+ +++ I+P +EHY C+VDL+G+AGL
Sbjct: 317 KSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGL 376

Query: 301 LREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASI 360
           L +A  FI+S+PF+PDA+VLGALL AC IH  TELGN VG++L+ +QP+HCG+YV L++ 
Sbjct: 377 LVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTF 436

Query: 361 NAGAEKWSHAAVIRR 373
           NA    WS A  +R+
Sbjct: 437 NALDSNWSEAEKMRK 450

BLAST of CmoCh11G018860 vs. ExPASy Swiss-Prot
Match: P0C8Q7 (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E105 PE=2 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-76
Identity = 151/380 (39.74%), Postives = 235/380 (61.84%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSAT-ISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRE 60
           ML     P+  T+P ++KS++ +S+  LG  +H   VK G+  D F+  + +  Y   R+
Sbjct: 99  MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158

Query: 61  LGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWN 120
             +ARK+FDE+    +V +NS+LDA+ K+GD+ SA L F  M +RDVV+W+S++ G+   
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 218

Query: 121 GRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELS 180
           G + +A+  F+ MM  G  K NE T VSV+ +CA+L   G L RGK +H YI+     L+
Sbjct: 219 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL---GALNRGKTVHRYILDVHLPLT 278

Query: 181 VFIGTALVDFYGKMGLLGSARTVFNQ--MKNRELCAWNAMISSLSSNGREREALELFASM 240
           V + T+L+D Y K G +G A +VF +  +K  +   WNA+I  L+S+G  RE+L+LF  M
Sbjct: 279 VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 338

Query: 241 KAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGL 300
           +   I P+E+TF+ +L AC+ G LV+     F+S+  +    P +EHY CMVD+L +AGL
Sbjct: 339 RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGL 398

Query: 301 LREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASI 360
           +++A +FI  MP +P  ++LGALLN C  HG  EL   VG++L+ +QP + GRYV LA++
Sbjct: 399 VKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANV 458

Query: 361 NAGAEKWSHAAVIRRTTRSR 378
            A  +++  A  +R     +
Sbjct: 459 YAINKQFRAARSMREAMEKK 474

BLAST of CmoCh11G018860 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-75
Identity = 162/436 (37.16%), Postives = 249/436 (57.11%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKS-ATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRE 60
           ML      NAYTFPS++K+ + +S+      IHA   K+G  +D + + S ++ YA    
Sbjct: 106 MLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGN 165

Query: 61  LGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWN 120
              A  +FD I +P  V++NS++  +VK G M  A+  FR M +++ +SWT+++ G+   
Sbjct: 166 FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA 225

Query: 121 GRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELS 180
               EA+  F   M N +V+P+  +  + LS+CA L   G L +GK IH+Y+ +    + 
Sbjct: 226 DMNKEALQLFH-EMQNSDVEPDNVSLANALSACAQL---GALEQGKWIHSYLNKTRIRMD 285

Query: 181 VFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKA 240
             +G  L+D Y K G +  A  VF  +K + + AW A+IS  + +G  REA+  F  M+ 
Sbjct: 286 SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK 345

Query: 241 EGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLR 300
            GI+PN +TF A+LTAC+   LVE G  +F SM  D+++ P  EHY C+VDLLG+AGLL 
Sbjct: 346 MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 405

Query: 301 EATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINA 360
           EA  FI+ MP +P+A + GALL AC IH   ELG E+G  L+ + P H GRYV  A+I+A
Sbjct: 406 EAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHA 465

Query: 361 GAEKWSHAAVIRRTTRSRPTRANHNKGNQVSLQ--PHEIITCRR-----QVVGSRIENEK 420
             +KW  AA  RR  + +   A     + +SL+   HE +   R     + + S+    +
Sbjct: 466 MDKKWDKAAETRRLMKEQGV-AKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMR 525

Query: 421 LKLEKFGFDEEIQTVI 429
            KLE+ G+  E++ ++
Sbjct: 526 RKLEENGYVPELEEML 536

BLAST of CmoCh11G018860 vs. ExPASy Swiss-Prot
Match: Q9FNN7 (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-72
Identity = 157/430 (36.51%), Postives = 245/430 (56.98%), Query Frame = 0

Query: 7   KPNAYTFPSII-KSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARK 66
           +P+ +TF  I   SA+ SS    +L+H+   + G  SD F  T+ ++ YA+L  L  AR+
Sbjct: 79  RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARR 138

Query: 67  VFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNGRFLEA 126
           VFDE++   +  +N+++  + + GDM +A+  F SM +++V SWT+++ GF  NG + EA
Sbjct: 139 VFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEA 198

Query: 127 IGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTA 186
           +  F  M  +  VKPN  T VSVL +CANL   G L  G+ +  Y   N    ++++  A
Sbjct: 199 LKMFLCMEKDKSVKPNHITVVSVLPACANL---GELEIGRRLEGYARENGFFDNIYVCNA 258

Query: 187 LVDFYGKMGLLGSARTVFNQMKN-RELCAWNAMISSLSSNGREREALELFASMKAEGIRP 246
            ++ Y K G++  A+ +F ++ N R LC+WN+MI SL+++G+  EAL LFA M  EG +P
Sbjct: 259 TIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP 318

Query: 247 NEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEF 306
           + VTFV +L AC  G +V  G ELF+SM     I P  EHY CM+DLLG+ G L+EA + 
Sbjct: 319 DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 378

Query: 307 IESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKW 366
           I++MP +PDA V G LL AC+ HG  E+       L  ++P + G  V +++I A  EKW
Sbjct: 379 IKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 438

Query: 367 SHAAVIRRTTR--SRPTRANHNKGNQVSLQPHEIIT-----CRRQVVGSRIEN--EKLKL 426
                +R+  +  +    A ++   +V +  H+         R   +   +E    ++KL
Sbjct: 439 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 498

BLAST of CmoCh11G018860 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.0e-69
Identity = 139/372 (37.37%), Postives = 217/372 (58.33%), Query Frame = 0

Query: 8   PNAYTFPSIIKS-ATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARKV 67
           P+ +T  S++ + A +    +GK IH+H V  G      VL + +S Y+    +  AR++
Sbjct: 277 PDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRL 336

Query: 68  FDE--ITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNGRFLE 127
            ++    D  I  F +LLD ++K GDM  A   F S+K RDVV+WT+++ G+  +G + E
Sbjct: 337 IEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGE 396

Query: 128 AIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGT 187
           AI  F  M+  G+ +PN  T  ++LS  ++LA+   L  GK+IH   +++    SV +  
Sbjct: 397 AINLFRSMVGGGQ-RPNSYTLAAMLSVASSLAS---LSHGKQIHGSAVKSGEIYSVSVSN 456

Query: 188 ALVDFYGKMGLLGSARTVFNQMK-NRELCAWNAMISSLSSNGREREALELFASMKAEGIR 247
           AL+  Y K G + SA   F+ ++  R+  +W +MI +L+ +G   EALELF +M  EG+R
Sbjct: 457 ALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLR 516

Query: 248 PNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATE 307
           P+ +T+V + +AC    LV  G + F  M +   I+P   HY CMVDL G+AGLL+EA E
Sbjct: 517 PDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQE 576

Query: 308 FIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEK 367
           FIE MP +PD    G+LL+AC +H   +LG     RLL+++P + G Y  LA++ +   K
Sbjct: 577 FIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGK 636

Query: 368 WSHAAVIRRTTR 376
           W  AA IR++ +
Sbjct: 637 WEEAAKIRKSMK 644

BLAST of CmoCh11G018860 vs. ExPASy TrEMBL
Match: A0A6J1ERE5 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita moschata OX=3662 GN=LOC111437118 PE=4 SV=1)

HSP 1 Score: 743.4 bits (1918), Expect = 7.9e-211
Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 60
           MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL
Sbjct: 76  MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 135

Query: 61  GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 120
           GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG
Sbjct: 136 GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 195

Query: 121 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 180
           RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV
Sbjct: 196 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 255

Query: 181 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 240
           FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE
Sbjct: 256 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 315

Query: 241 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 300
           GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE
Sbjct: 316 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 375

Query: 301 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 360
           ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG
Sbjct: 376 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 435

Query: 361 AEKWSHAAVIRR 373
           AEKWSHAAVIRR
Sbjct: 436 AEKWSHAAVIRR 447

BLAST of CmoCh11G018860 vs. ExPASy TrEMBL
Match: A0A6J1JN92 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxima OX=3661 GN=LOC111486006 PE=4 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 1.3e-202
Identity = 361/372 (97.04%), Postives = 363/372 (97.58%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 60
           MLAHRTKPNA+TFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL
Sbjct: 76  MLAHRTKPNAHTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 135

Query: 61  GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 120
           GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGF WNG
Sbjct: 136 GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFWWNG 195

Query: 121 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 180
           RFLEAIGFFEMMMMN EVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELS 
Sbjct: 196 RFLEAIGFFEMMMMNREVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSA 255

Query: 181 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 240
           FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGR REALELFASMK E
Sbjct: 256 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGRGREALELFASMKVE 315

Query: 241 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 300
           GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDF IVPIAEHYVCMVDLL KAGLLRE
Sbjct: 316 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFLIVPIAEHYVCMVDLLAKAGLLRE 375

Query: 301 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 360
           ATEFIESMPFQPDA+VLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINA 
Sbjct: 376 ATEFIESMPFQPDASVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAR 435

Query: 361 AEKWSHAAVIRR 373
           AEKWS AAVIRR
Sbjct: 436 AEKWSRAAVIRR 447

BLAST of CmoCh11G018860 vs. ExPASy TrEMBL
Match: A0A5D3C5L7 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G004380 PE=4 SV=1)

HSP 1 Score: 630.6 bits (1625), Expect = 7.4e-177
Identity = 310/371 (83.56%), Postives = 338/371 (91.11%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 60
           ML+ +TKPN +TFPSIIKSATI SPLL KLIHAHA KIGV++DP VLTSFVS Y +LREL
Sbjct: 1   MLSQQTKPNFHTFPSIIKSATIYSPLLPKLIHAHAFKIGVLTDPVVLTSFVSSYGDLREL 60

Query: 61  GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 120
           GNARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAV  FR M +RDVVSWTS+V+GF WNG
Sbjct: 61  GNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVFMFRYMPERDVVSWTSVVNGFWWNG 120

Query: 121 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 180
           RFLEA+ FF+MMMM+G VKPNEATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEGE SV
Sbjct: 121 RFLEALWFFQMMMMSGSVKPNEATYVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGEFSV 180

Query: 181 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 240
           FIGTAL+DFYGKMGLLG ARTVFNQMK RE+C WNAMISS +SN RE EAL+LFA+MK E
Sbjct: 181 FIGTALIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNSRETEALDLFATMKVE 240

Query: 241 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 300
           GI PNEVTFVAILTACARGKLV+ GL+LF+SM  DFSIVPI EHYVC+VDLLGKAGLLRE
Sbjct: 241 GIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLRE 300

Query: 301 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 360
           ATEFIESMPF PDA+VLGALL+AC IHGA ELGNEVGRRLLVMQPRHCGRYVTLAS+NAG
Sbjct: 301 ATEFIESMPFDPDASVLGALLSACKIHGAIELGNEVGRRLLVMQPRHCGRYVTLASMNAG 360

Query: 361 AEKWSHAAVIR 372
           AEKW+ AAVIR
Sbjct: 361 AEKWNRAAVIR 371

BLAST of CmoCh11G018860 vs. ExPASy TrEMBL
Match: A0A1S3C130 (putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo OX=3656 GN=LOC103495611 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 3.7e-176
Identity = 309/371 (83.29%), Postives = 337/371 (90.84%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 60
           ML+ +TKPN +TFPSIIKSATI SPLL KLIHAHA KIGV++DP VLTSFVS Y +LREL
Sbjct: 76  MLSQQTKPNFHTFPSIIKSATIYSPLLPKLIHAHAFKIGVLTDPVVLTSFVSSYGDLREL 135

Query: 61  GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 120
           GNARKVFDEITDPCIVAFNS+LDAFVKNGD+GSAV  FR M +RDVVSWTS+V+GF WNG
Sbjct: 136 GNARKVFDEITDPCIVAFNSMLDAFVKNGDLGSAVFMFRYMPERDVVSWTSVVNGFWWNG 195

Query: 121 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 180
           RFLEA+ FF+MMMM+G VKPNEATYVSVLSSCANL AEGVLCRGKE+HAYIIRNEGE SV
Sbjct: 196 RFLEALWFFQMMMMSGSVKPNEATYVSVLSSCANLDAEGVLCRGKEVHAYIIRNEGEFSV 255

Query: 181 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 240
           FIGTAL+DFYGKMGLLG ARTVFNQMK RE+C WNAMISS +SN RE EAL+LFA+MK E
Sbjct: 256 FIGTALIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNSRETEALDLFATMKVE 315

Query: 241 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 300
           GI PNEVTFVAILTACARGKLV+ GL+LF+SM  DFSIVPI EHYVC+VDLLGKAGLLRE
Sbjct: 316 GIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLRE 375

Query: 301 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 360
           ATE IESMPF PDA+VLGALL+AC IHGA ELGNEVGRRLLVMQPRHCGRYVTLAS+NAG
Sbjct: 376 ATEIIESMPFDPDASVLGALLSACKIHGAIELGNEVGRRLLVMQPRHCGRYVTLASMNAG 435

Query: 361 AEKWSHAAVIR 372
           AEKW+ AAVIR
Sbjct: 436 AEKWNRAAVIR 446

BLAST of CmoCh11G018860 vs. ExPASy TrEMBL
Match: A0A0A0K5I5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1)

HSP 1 Score: 621.3 bits (1601), Expect = 4.5e-174
Identity = 306/372 (82.26%), Postives = 336/372 (90.32%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 60
           ML+ +TKPN +TFPSIIKSATI S LL KLIHAHA KIGV++DP VLTSFVS YA+LREL
Sbjct: 78  MLSQQTKPNFHTFPSIIKSATICSSLLPKLIHAHAFKIGVLTDPVVLTSFVSSYADLREL 137

Query: 61  GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 120
            NARKVFDEIT+PCIVAFNS+LDAFVKNGD+GSAV  FRSM + DVVSWTS+++GF WNG
Sbjct: 138 ANARKVFDEITNPCIVAFNSMLDAFVKNGDLGSAVFMFRSMPEHDVVSWTSVINGFWWNG 197

Query: 121 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 180
           RFLEA+ FF +MMM+G VKPNEATYVSVLSS ANL AEGVLCRGKE+HAYIIRNEGE SV
Sbjct: 198 RFLEALWFFHVMMMSGSVKPNEATYVSVLSSSANLDAEGVLCRGKEVHAYIIRNEGEFSV 257

Query: 181 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 240
           FIGT L+DFYGKMGLLG ARTVFNQMK RE+C WNAMISS +SNGRE EAL+LFA+MK E
Sbjct: 258 FIGTGLIDFYGKMGLLGCARTVFNQMKKREVCTWNAMISSFASNGRETEALDLFATMKVE 317

Query: 241 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 300
           GI PNEVTFVAILTACARGKLV+ GL+LF+SM  DFSIVPI EHYVC+VDLLGKAGLLRE
Sbjct: 318 GIHPNEVTFVAILTACARGKLVKLGLQLFQSMLYDFSIVPITEHYVCVVDLLGKAGLLRE 377

Query: 301 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 360
           ATEFIESMPF PDA+VLGALL+AC IHGATELGNEVGRRLL MQPRHCGRYVTLAS+NAG
Sbjct: 378 ATEFIESMPFDPDASVLGALLSACKIHGATELGNEVGRRLLEMQPRHCGRYVTLASMNAG 437

Query: 361 AEKWSHAAVIRR 373
           AEKW+ AAVIRR
Sbjct: 438 AEKWNRAAVIRR 449

BLAST of CmoCh11G018860 vs. TAIR 10
Match: AT1G10330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 386.7 bits (992), Expect = 3.6e-107
Identity = 192/375 (51.20%), Postives = 270/375 (72.00%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATIS-SPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRE 60
           MLA   +PN  TFPS+IK+A  S S   G  +H  A+K G + DPFV TSFV FY E+ +
Sbjct: 77  MLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGD 136

Query: 61  LGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWN 120
           L ++RK+FD+I +PC+VA NSLLDA  +NG+M  A   F+ M   DVVSWT++++GF   
Sbjct: 137 LESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196

Query: 121 GRFLEAIGFFEMMMMN--GEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGE 180
           G   +A+  F  M+ N    + PNEAT+VSVLSSCAN    G+   GK+IH Y++  E  
Sbjct: 197 GLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRL-GKQIHGYVMSKEII 256

Query: 181 LSVFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASM 240
           L+  +GTAL+D YGK G L  A T+F+Q++++++CAWNA+IS+L+SNGR ++ALE+F  M
Sbjct: 257 LTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMM 316

Query: 241 KAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGL 300
           K+  + PN +T +AILTACAR KLV+ G++LF S+ +++ I+P +EHY C+VDL+G+AGL
Sbjct: 317 KSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGL 376

Query: 301 LREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASI 360
           L +A  FI+S+PF+PDA+VLGALL AC IH  TELGN VG++L+ +QP+HCG+YV L++ 
Sbjct: 377 LVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTF 436

Query: 361 NAGAEKWSHAAVIRR 373
           NA    WS A  +R+
Sbjct: 437 NALDSNWSEAEKMRK 450

BLAST of CmoCh11G018860 vs. TAIR 10
Match: AT5G08305.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 287.0 bits (733), Expect = 3.9e-77
Identity = 151/380 (39.74%), Postives = 235/380 (61.84%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSAT-ISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRE 60
           ML     P+  T+P ++KS++ +S+  LG  +H   VK G+  D F+  + +  Y   R+
Sbjct: 99  MLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRD 158

Query: 61  LGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWN 120
             +ARK+FDE+    +V +NS+LDA+ K+GD+ SA L F  M +RDVV+W+S++ G+   
Sbjct: 159 QASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKR 218

Query: 121 GRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELS 180
           G + +A+  F+ MM  G  K NE T VSV+ +CA+L   G L RGK +H YI+     L+
Sbjct: 219 GEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHL---GALNRGKTVHRYILDVHLPLT 278

Query: 181 VFIGTALVDFYGKMGLLGSARTVFNQ--MKNRELCAWNAMISSLSSNGREREALELFASM 240
           V + T+L+D Y K G +G A +VF +  +K  +   WNA+I  L+S+G  RE+L+LF  M
Sbjct: 279 VILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKM 338

Query: 241 KAEGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGL 300
           +   I P+E+TF+ +L AC+ G LV+     F+S+  +    P +EHY CMVD+L +AGL
Sbjct: 339 RESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGL 398

Query: 301 LREATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASI 360
           +++A +FI  MP +P  ++LGALLN C  HG  EL   VG++L+ +QP + GRYV LA++
Sbjct: 399 VKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANV 458

Query: 361 NAGAEKWSHAAVIRRTTRSR 378
            A  +++  A  +R     +
Sbjct: 459 YAINKQFRAARSMREAMEKK 474

BLAST of CmoCh11G018860 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 1.1e-76
Identity = 162/436 (37.16%), Postives = 249/436 (57.11%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKS-ATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRE 60
           ML      NAYTFPS++K+ + +S+      IHA   K+G  +D + + S ++ YA    
Sbjct: 106 MLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGN 165

Query: 61  LGNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWN 120
              A  +FD I +P  V++NS++  +VK G M  A+  FR M +++ +SWT+++ G+   
Sbjct: 166 FKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQA 225

Query: 121 GRFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELS 180
               EA+  F   M N +V+P+  +  + LS+CA L   G L +GK IH+Y+ +    + 
Sbjct: 226 DMNKEALQLFH-EMQNSDVEPDNVSLANALSACAQL---GALEQGKWIHSYLNKTRIRMD 285

Query: 181 VFIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKA 240
             +G  L+D Y K G +  A  VF  +K + + AW A+IS  + +G  REA+  F  M+ 
Sbjct: 286 SVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQK 345

Query: 241 EGIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLR 300
            GI+PN +TF A+LTAC+   LVE G  +F SM  D+++ P  EHY C+VDLLG+AGLL 
Sbjct: 346 MGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLD 405

Query: 301 EATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINA 360
           EA  FI+ MP +P+A + GALL AC IH   ELG E+G  L+ + P H GRYV  A+I+A
Sbjct: 406 EAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHA 465

Query: 361 GAEKWSHAAVIRRTTRSRPTRANHNKGNQVSLQ--PHEIITCRR-----QVVGSRIENEK 420
             +KW  AA  RR  + +   A     + +SL+   HE +   R     + + S+    +
Sbjct: 466 MDKKWDKAAETRRLMKEQGV-AKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMR 525

Query: 421 LKLEKFGFDEEIQTVI 429
            KLE+ G+  E++ ++
Sbjct: 526 RKLEENGYVPELEEML 536

BLAST of CmoCh11G018860 vs. TAIR 10
Match: AT5G08510.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 275.4 bits (703), Expect = 1.2e-73
Identity = 157/430 (36.51%), Postives = 245/430 (56.98%), Query Frame = 0

Query: 7   KPNAYTFPSII-KSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELRELGNARK 66
           +P+ +TF  I   SA+ SS    +L+H+   + G  SD F  T+ ++ YA+L  L  AR+
Sbjct: 79  RPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARR 138

Query: 67  VFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNGRFLEA 126
           VFDE++   +  +N+++  + + GDM +A+  F SM +++V SWT+++ GF  NG + EA
Sbjct: 139 VFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEA 198

Query: 127 IGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSVFIGTA 186
           +  F  M  +  VKPN  T VSVL +CANL   G L  G+ +  Y   N    ++++  A
Sbjct: 199 LKMFLCMEKDKSVKPNHITVVSVLPACANL---GELEIGRRLEGYARENGFFDNIYVCNA 258

Query: 187 LVDFYGKMGLLGSARTVFNQMKN-RELCAWNAMISSLSSNGREREALELFASMKAEGIRP 246
            ++ Y K G++  A+ +F ++ N R LC+WN+MI SL+++G+  EAL LFA M  EG +P
Sbjct: 259 TIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKP 318

Query: 247 NEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLREATEF 306
           + VTFV +L AC  G +V  G ELF+SM     I P  EHY CM+DLLG+ G L+EA + 
Sbjct: 319 DAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 378

Query: 307 IESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAGAEKW 366
           I++MP +PDA V G LL AC+ HG  E+       L  ++P + G  V +++I A  EKW
Sbjct: 379 IKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKW 438

Query: 367 SHAAVIRRTTR--SRPTRANHNKGNQVSLQPHEIIT-----CRRQVVGSRIEN--EKLKL 426
                +R+  +  +    A ++   +V +  H+         R   +   +E    ++KL
Sbjct: 439 DGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKL 498

BLAST of CmoCh11G018860 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 262.3 bits (669), Expect = 1.0e-69
Identity = 140/375 (37.33%), Postives = 219/375 (58.40%), Query Frame = 0

Query: 1   MLAHRTKPNAYTFPSIIKSATISSPLLGKLIHAHAVKIGVVSDPFVLTSFVSFYAELREL 60
           M+ +   P+ Y   S++K+  +    + + IHA  +K+G  S   V    +  Y +  EL
Sbjct: 118 MIHNSVLPDNYVITSVLKACDLK---VCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGEL 177

Query: 61  GNARKVFDEITDPCIVAFNSLLDAFVKNGDMGSAVLKFRSMKKRDVVSWTSIVHGFCWNG 120
            NA+K+FDE+ D   VA   +++ + + G +  A+  F+ +K +D V WT+++ G   N 
Sbjct: 178 VNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNK 237

Query: 121 RFLEAIGFFEMMMMNGEVKPNEATYVSVLSSCANLAAEGVLCRGKEIHAYIIRNEGELSV 180
              +A+  F  M M   V  NE T V VLS+C++L   G L  G+ +H+++     ELS 
Sbjct: 238 EMNKALELFREMQME-NVSANEFTAVCVLSACSDL---GALELGRWVHSFVENQRMELSN 297

Query: 181 FIGTALVDFYGKMGLLGSARTVFNQMKNRELCAWNAMISSLSSNGREREALELFASMKAE 240
           F+G AL++ Y + G +  AR VF  M+++++ ++N MIS L+ +G   EA+  F  M   
Sbjct: 298 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNR 357

Query: 241 GIRPNEVTFVAILTACARGKLVESGLELFRSMSNDFSIVPIAEHYVCMVDLLGKAGLLRE 300
           G RPN+VT VA+L AC+ G L++ GLE+F SM   F++ P  EHY C+VDLLG+ G L E
Sbjct: 358 GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE 417

Query: 301 ATEFIESMPFQPDATVLGALLNACNIHGATELGNEVGRRLLVMQPRHCGRYVTLASINAG 360
           A  FIE++P +PD  +LG LL+AC IHG  ELG ++ +RL   +    G YV L+++ A 
Sbjct: 418 AYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYAS 477

Query: 361 AEKWSHAAVIRRTTR 376
           + KW  +  IR + R
Sbjct: 478 SGKWKESTEIRESMR 485

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SY755.1e-10651.20Putative pentatricopeptide repeat-containing protein At1g10330 OS=Arabidopsis th... [more]
P0C8Q75.5e-7639.74Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX... [more]
Q9FJY71.6e-7537.16Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9FNN71.6e-7236.51Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana OX... [more]
Q9SHZ85.0e-6937.37Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1ERE57.9e-211100.00putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita mosc... [more]
A0A6J1JN921.3e-20297.04putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucurbita maxi... [more]
A0A5D3C5L77.4e-17783.56Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa... [more]
A0A1S3C1303.7e-17683.29putative pentatricopeptide repeat-containing protein At1g10330 OS=Cucumis melo O... [more]
A0A0A0K5I54.5e-17482.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043000 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G10330.13.6e-10751.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G08305.13.9e-7739.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G66520.11.1e-7637.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G08510.11.2e-7336.51Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G59200.11.0e-6937.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 597..617
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..451
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..648
NoneNo IPR availablePANTHERPTHR47929:SF1SUBFAMILY NOT NAMEDcoord: 2..380
NoneNo IPR availablePANTHERPTHR47929FAMILY NOT NAMEDcoord: 2..380
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 213..246
e-value: 8.0E-9
score: 33.1
coord: 76..107
e-value: 9.2E-5
score: 20.4
coord: 107..141
e-value: 8.6E-5
score: 20.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 184..209
e-value: 0.082
score: 13.2
coord: 284..308
e-value: 0.12
score: 12.6
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 104..154
e-value: 2.7E-9
score: 37.1
coord: 212..258
e-value: 4.2E-11
score: 42.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 11.904029
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 105..139
score: 10.347525
IPR010471Protein of unknown function DUF1068PFAMPF06364DUF1068coord: 466..633
e-value: 1.4E-80
score: 269.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 165..255
e-value: 2.9E-20
score: 74.4
coord: 29..159
e-value: 8.3E-25
score: 89.2
coord: 256..339
e-value: 1.1E-11
score: 46.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G018860.1CmoCh11G018860.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding