CmoCh11G018480 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G018480
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	exopolygalacturonase-like
Location	Cmo_Chr11: 12889761 .. 12891072 (+)
RNA-Seq Expression	CmoCh11G018480
Synteny	CmoCh11G018480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGCATGCGCGTCCGGTCGTTCTAGTGCAATCGTTATTCCGGGAGGGACATTTGAAGTACGGGAAGGGAATTTTGCAGGACCTTGTAAAAACCGAATTGACTTCCAACTTGGAGGAACGCTGCGGGCACCAAAAGCTCTTCCAGGAGATAATTGGATTATTTTTGCACATATTGATAGATTGACAGTATCGGGTGGAGGAGTTTTTGATGGCCAAGGAAAGGAAGCTTGGGGAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCGTTGTAAGCAATATGCCTTCAACTTTCCTTTTCAATCTGGCGCATCTTGTTGTTTTTGAAAGGGTCTCTTAGATGTCTTCTCTCATCTTCTAAGGTTTATAATTTGGTAACTGTTCTTCCTTTTTTAGAGGATAATCTTTAAACAGTCAAGTTTTCAATTTTATTGGGTTCTATTCAAATTGTTTGCTTTATTACTACCAACTCTCACAAAATATTATTTGATTATACAAAATATTTAGAGTTTGAGGTTCAACTTCATCACCAATTCAATCGTGACGAGAATTACGTCACTTGATAGCAAGAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAATTGCACCAGGAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAAGATCACGATCACAAAGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAGACAAATTGAAGTCGCCAACGTGACATGCGGGCCAGGACATGGCATAAGCGTCGGAAGTCTTGGAAGATACACCAACGAAGAACCGGTTGAAGGTGTCCTCGTAAAGAACTGCACGATGATTAACACCACTAATGGTGTCAGGATCAAAACGTGGCCAGGTTCTGCTGCTGGAGGCACCGCCACCGATATGCACTTTTTGGACATTATAATGGTCAATGTTGGCAACCCTATTCTAATAGATCAAGAGTATTGTCCGTGGAATCAGTGCAATCGGCAGGTATTGATCGCATTCTCAAACCTTTGATTGATTTTGTCACTATAACTTTCACAAATAAACCATTTACAGAAGTTTGTTGTCTCATTTTGATTTTTCAGGTTCCTTCGAAAATTAAGATTAGTAAAGTGAGCTTCGAGAACATTAGAGGAAGTTCTGCAACTCCCGTGGCAATCAAACTTATTTGCAGCCGTAGCTTCCCATGCGAAGAAGTGAAATTCCGTGACATTGACCTCACTCCCAACGGGATAACAGGTCCTATTACATCCCAATGTACGAAT

mRNA sequence

GATGCATGCGCGTCCGGTCGTTCTAGTGCAATCGTTATTCCGGGAGGGACATTTGAAGTACGGGAAGGGAATTTTGCAGGACCTTGTAAAAACCGAATTGACTTCCAACTTGGAGGAACGCTGCGGGCACCAAAAGCTCTTCCAGGAGATAATTGGATTATTTTTGCACATATTGATAGATTGACAGTATCGGGTGGAGGAGTTTTTGATGGCCAAGGAAAGGAAGCTTGGGGAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCGTTAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAATTGCACCAGGAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAAGATCACGATCACAAAGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAGACAAATTGAAGTCGCCAACGTGACATGCGGGCCAGGACATGGCATAAGCGTCGGAAGTCTTGGAAGATACACCAACGAAGAACCGGTTGAAGGTGTCCTCGTAAAGAACTGCACGATGATTAACACCACTAATGGTGTCAGGATCAAAACGTGGCCAGGTTCTGCTGCTGGAGGCACCGCCACCGATATGCACTTTTTGGACATTATAATGGTCAATGTTGGCAACCCTATTCTAATAGATCAAGAGTATTGTCCGTGGAATCAGTGCAATCGGCAGGTTCCTTCGAAAATTAAGATTAGTAAAGTGAGCTTCGAGAACATTAGAGGAAGTTCTGCAACTCCCGTGGCAATCAAACTTATTTGCAGCCGTAGCTTCCCATGCGAAGAAGTGAAATTCCGTGACATTGACCTCACTCCCAACGGGATAACAGGTCCTATTACATCCCAATGTACGAAT

Coding sequence (CDS)

GATGCATGCGCGTCCGGTCGTTCTAGTGCAATCGTTATTCCGGGAGGGACATTTGAAGTACGGGAAGGGAATTTTGCAGGACCTTGTAAAAACCGAATTGACTTCCAACTTGGAGGAACGCTGCGGGCACCAAAAGCTCTTCCAGGAGATAATTGGATTATTTTTGCACATATTGATAGATTGACAGTATCGGGTGGAGGAGTTTTTGATGGCCAAGGAAAGGAAGCTTGGGGAAAGAATGATTGCCATAAACGCATAAATTGTGCCCAACTCCCCGTTAACTTCCATATCAACGTCCTCGGCTGCAACAACCTCACATTCCATAATATCAATATAATTGCACCAGGAAACAGTCCCAACACTGATGGAATACACATCGGTCGATCAAATAAGATCACGATCACAAAGTCCAAAATTGCAACAGGAGATGATTGCATTTCTCTTGGAGATGGAAGCAGACAAATTGAAGTCGCCAACGTGACATGCGGGCCAGGACATGGCATAAGCGTCGGAAGTCTTGGAAGATACACCAACGAAGAACCGGTTGAAGGTGTCCTCGTAAAGAACTGCACGATGATTAACACCACTAATGGTGTCAGGATCAAAACGTGGCCAGGTTCTGCTGCTGGAGGCACCGCCACCGATATGCACTTTTTGGACATTATAATGGTCAATGTTGGCAACCCTATTCTAATAGATCAAGAGTATTGTCCGTGGAATCAGTGCAATCGGCAGGTTCCTTCGAAAATTAAGATTAGTAAAGTGAGCTTCGAGAACATTAGAGGAAGTTCTGCAACTCCCGTGGCAATCAAACTTATTTGCAGCCGTAGCTTCCCATGCGAAGAAGTGAAATTCCGTGACATTGACCTCACTCCCAACGGGATAACAGGTCCTATTACATCCCAATGTACGAAT

Protein sequence

DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDRLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVNFHINVLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVANVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFLDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFPCEEVKFRDIDLTPNGITGPITSQCTN

Homology

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BLAST of CmoCh11G018480 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.7e-99
Identity = 181/330 (54.85%), Postives = 218/330 (66.06%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRA---PKALPGDNWIIFAH 60
           +ACAS   S I++P G F V      GPCK+ I  QL GTL+A   P  + G  WI    
Sbjct: 12  EACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLGWINLNK 71

Query: 61  IDRLTVSGGGVFDGQGKEAWGKNDCHKR--------INCAQLPV--------------NF 120
           ID LT+ GGGVFDGQGK AW +NDCHK         +N     V              NF
Sbjct: 72  IDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTTLDSKNF 131

Query: 121 HINVLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQI 180
           H+NV+GC NLTF    I A   S NTDGIHIGRS+ + I  ++I TGDDCISLGDGS+ I
Sbjct: 132 HVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLGDGSKNI 191

Query: 181 EVANVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATD 240
            + N+TCGPGHGISVGSLGRY NEE V G+ VKNCT+  + NGVRIKTWP S   G A++
Sbjct: 192 NITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEP-GEASE 251

Query: 241 MHFLDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICS 300
           MHF DI M +VG PILIDQ YCP+NQC  +VPS +K+SK+SF+NI+G+S T  A+KL+CS
Sbjct: 252 MHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEAVKLVCS 311

Query: 301 RSFPCEEVKFRDIDLTPNGITGPITSQCTN 306
           +SFPC  V+  DIDLT +G  GP TS C N
Sbjct: 312 KSFPCNGVELADIDLTYSGKGGPATSVCEN 340

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BLAST of CmoCh11G018480 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 8.0e-94
Identity = 164/329 (49.85%), Postives = 214/329 (65.05%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRA---PKALPGDNWIIFAH 60
           +ACAS   S +VIP GT+ + + N  GPCK  I+  + GT++A   P A    NW+ F  
Sbjct: 55  EACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYS 114

Query: 61  IDRLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVN---------------------FH 120
           ++   + GGG+FDGQG  A+ KN C  R   ++LPVN                     FH
Sbjct: 115 VENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFH 174

Query: 121 INVLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIE 180
           INV  C N+T   + I AP  SPNTDGIH+G+S  + I  S I TGDDCIS+GDG++ + 
Sbjct: 175 INVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMV 234

Query: 181 VANVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDM 240
           +  +TCGPGHGIS+GSLG++ NEEPVEG+ + NCT+ NT+NG RIKTWPG   GG  +++
Sbjct: 235 IKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGE-HGGAVSEI 294

Query: 241 HFLDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSR 300
           HF DI M NV +PILIDQ+YCPWN+C +   SK+K+S +SF+NIRG+SA P AIK ICS 
Sbjct: 295 HFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSG 354

Query: 301 SFPCEEVKFRDIDLTPNGITGPITSQCTN 306
           S PC+ V+  DID+  NG   P TSQC N
Sbjct: 355 SSPCQNVELADIDIQHNG-AEPATSQCLN 381

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BLAST of CmoCh11G018480 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 8.0e-94
Identity = 164/329 (49.85%), Postives = 214/329 (65.05%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRA---PKALPGDNWIIFAH 60
           +ACAS   S +VIP GT+ + + N  GPCK  I+  + GT++A   P A    NW+ F  
Sbjct: 55  EACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYS 114

Query: 61  IDRLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVN---------------------FH 120
           ++   + GGG+FDGQG  A+ KN C  R   ++LPVN                     FH
Sbjct: 115 VENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDSKLFH 174

Query: 121 INVLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIE 180
           INV  C N+T   + I AP  SPNTDGIH+G+S  + I  S I TGDDCIS+GDG++ + 
Sbjct: 175 INVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMV 234

Query: 181 VANVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDM 240
           +  +TCGPGHGIS+GSLG++ NEEPVEG+ + NCT+ NT+NG RIKTWPG   GG  +++
Sbjct: 235 IKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGE-HGGAVSEI 294

Query: 241 HFLDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSR 300
           HF DI M NV +PILIDQ+YCPWN+C +   SK+K+S +SF+NIRG+SA P AIK ICS 
Sbjct: 295 HFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSG 354

Query: 301 SFPCEEVKFRDIDLTPNGITGPITSQCTN 306
           S PC+ V+  DID+  NG   P TSQC N
Sbjct: 355 SSPCQNVELADIDIKHNG-AEPATSQCLN 381

[Close]

BLAST of CmoCh11G018480 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.6e-92
Identity = 161/329 (48.94%), Postives = 209/329 (63.53%), Query Frame = 0


Query: 2   ACASGRSSAIVIPGGTFEVREGNFAGPCK-NRIDFQLGGTLRA---PKALPGDNWIIFAH 61
           ACAS   S ++IP G + + E    GPCK ++I FQ+ G ++A   P     D W+ F  
Sbjct: 34  ACASQGPSTVLIPKGNYNMGEVAMQGPCKGSKIGFQIDGVVKAPADPSKFKSDGWVSFYR 93

Query: 62  IDRLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVN---------------------FH 121
           ID LTVSG G  DGQG+ AW KN+C K  NC    +N                     FH
Sbjct: 94  IDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCKHAAMNLRFDFLKHAMVRDITSLNSKMFH 153

Query: 122 INVLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIE 181
           INVL C ++TF ++ + APG S NTDGIH+G S  +TIT +KIATGDDCIS+G GS+ + 
Sbjct: 154 INVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVTITNTKIATGDDCISIGPGSQNVT 213

Query: 182 VANVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDM 241
           +  V CGPGHGIS+GSLGRY NE+ V G+ VK CT   T NGVR+KTWP S   G ATD+
Sbjct: 214 ITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFSGTMNGVRVKTWPNSPP-GAATDL 273

Query: 242 HFLDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSR 301
            F D+ M NV NP+++DQEYCP+ QC+RQ PS+IK+S ++F NIRG+S   VA+ + CS 
Sbjct: 274 TFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSH 333

Query: 302 SFPCEEVKFRDIDLTPNGITGPITSQCTN 306
             PC  +K  +I+L+  G  GP TS C+N
Sbjct: 334 GMPCSNMKIGEINLSYRGAGGPATSTCSN 361

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BLAST of CmoCh11G018480 vs. ExPASy Swiss-Prot
Match: P35337 (Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 9.7e-92
Identity = 159/327 (48.62%), Postives = 206/327 (63.00%), Query Frame = 0


Query: 2   ACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAP--KALPGDNWIIFAHID 61
           AC +   S ++IP G F++ E    GPCK+ I+F L G ++         D W++F  I+
Sbjct: 46  ACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDRWVVFEKIN 105

Query: 62  RLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHIN 121
              ++GGG FDG+G  AW  N+CHK   C +LP+                     NFH N
Sbjct: 106 GFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKNFHFN 165

Query: 122 VLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVA 181
           V+   N+TF NI IIAP  SPNTDGIH+GR   + I  +KIATGDDCIS+GDG + + + 
Sbjct: 166 VISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKNLLIE 225

Query: 182 NVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHF 241
            V CGPGHGISVGSLGRY  E+ V  + VKNCT+  T+NG+RIKTWP +A   TA  +HF
Sbjct: 226 KVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAAGIHF 285

Query: 242 LDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSF 301
            DII+  V NPILIDQEYCPWNQCN+  PS IK+  ++F NIRG+S    A+KL+CS+  
Sbjct: 286 EDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENKDAVKLLCSKGH 345

Query: 302 PCEEVKFRDIDLTPNGITGPITSQCTN 306
           PCE V+  DI++   G  GP T +CTN
Sbjct: 346 PCENVEIGDINIEYTGPDGPPTFECTN 372

[Close]

BLAST of CmoCh11G018480 vs. ExPASy TrEMBL
Match: A0A6J1EJR5 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111435131 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 9.2e-178
Identity = 305/326 (93.56%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 60
           DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR
Sbjct: 57  DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 116

Query: 61  LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHINV 120
           LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV                     NFHINV
Sbjct: 117 LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVSLRFNFITNSIVTRITSLDSKNFHINV 176

Query: 121 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 180
           LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN
Sbjct: 177 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 236

Query: 181 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 240
           VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL
Sbjct: 237 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 296

Query: 241 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 300
           DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP
Sbjct: 297 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 356

Query: 301 CEEVKFRDIDLTPNGITGPITSQCTN 306
           CEEVKFRDIDLTPNGITGPITSQCTN
Sbjct: 357 CEEVKFRDIDLTPNGITGPITSQCTN 382

[Close]

BLAST of CmoCh11G018480 vs. ExPASy TrEMBL
Match: A0A6J1EJC2 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111435132 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 9.2e-178
Identity = 305/326 (93.56%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 60
           DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR
Sbjct: 57  DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 116

Query: 61  LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHINV 120
           LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV                     NFHINV
Sbjct: 117 LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVSLRFNFITNSIVTRITSLDSKNFHINV 176

Query: 121 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 180
           LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN
Sbjct: 177 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 236

Query: 181 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 240
           VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL
Sbjct: 237 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 296

Query: 241 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 300
           DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP
Sbjct: 297 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 356

Query: 301 CEEVKFRDIDLTPNGITGPITSQCTN 306
           CEEVKFRDIDLTPNGITGPITSQCTN
Sbjct: 357 CEEVKFRDIDLTPNGITGPITSQCTN 382

[Close]

BLAST of CmoCh11G018480 vs. ExPASy TrEMBL
Match: A0A6J1EXI6 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111437086 PE=3 SV=1)

HSP 1 Score: 632.5 bits (1630), Expect = 9.2e-178
Identity = 305/326 (93.56%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 60
           DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR
Sbjct: 57  DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 116

Query: 61  LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHINV 120
           LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV                     NFHINV
Sbjct: 117 LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVSLRFNFITNSIVTRITSLDSKNFHINV 176

Query: 121 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 180
           LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN
Sbjct: 177 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 236

Query: 181 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 240
           VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL
Sbjct: 237 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 296

Query: 241 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 300
           DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP
Sbjct: 297 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 356

Query: 301 CEEVKFRDIDLTPNGITGPITSQCTN 306
           CEEVKFRDIDLTPNGITGPITSQCTN
Sbjct: 357 CEEVKFRDIDLTPNGITGPITSQCTN 382

[Close]

BLAST of CmoCh11G018480 vs. ExPASy TrEMBL
Match: A0A6J1ES70 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111437085 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.6e-177
Identity = 304/326 (93.25%), Postives = 304/326 (93.25%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 60
           DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR
Sbjct: 57  DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 116

Query: 61  LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHINV 120
           LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV                     NFHINV
Sbjct: 117 LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPVSLRFNFITNSIVTRITSLDSKNFHINV 176

Query: 121 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 180
           LGCNNLT HNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN
Sbjct: 177 LGCNNLTLHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 236

Query: 181 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 240
           VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL
Sbjct: 237 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 296

Query: 241 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 300
           DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP
Sbjct: 297 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 356

Query: 301 CEEVKFRDIDLTPNGITGPITSQCTN 306
           CEEVKFRDIDLTPNGITGPITSQCTN
Sbjct: 357 CEEVKFRDIDLTPNGITGPITSQCTN 382

[Close]

BLAST of CmoCh11G018480 vs. ExPASy TrEMBL
Match: A0A6J1EPU1 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111436520 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 9.0e-149
Identity = 256/326 (78.53%), Postives = 274/326 (84.05%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPGDNWIIFAHIDR 60
           DAC S RSSAIVIPGG F+V+EG F GPC + IDFQLGGTL+APK+L GDNWI F HIDR
Sbjct: 57  DACTSNRSSAIVIPGGIFKVKEGIFKGPCNSPIDFQLGGTLQAPKSLQGDNWITFEHIDR 116

Query: 61  LTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHINV 120
           LT+SG GVFDGQGK AW KNDCHKRINCAQLP+                     NFHINV
Sbjct: 117 LTLSGEGVFDGQGKAAWKKNDCHKRINCAQLPISLRFNFITNSIVKRITSLDSKNFHINV 176

Query: 121 LGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVAN 180
           LGCNNLTF NINI AP NSPNTDGIHIGRSN+I IT SKIATGDDCISLGDGS+QI + N
Sbjct: 177 LGCNNLTFSNINITAPENSPNTDGIHIGRSNRIAITMSKIATGDDCISLGDGSKQINITN 236

Query: 181 VTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHFL 240
           VTCGPGHGIS+GSLGRYTNEEPVEGV+VKNCT+INTTNGVRIKTWP SAA GTAT+M FL
Sbjct: 237 VTCGPGHGISIGSLGRYTNEEPVEGVIVKNCTIINTTNGVRIKTWPASAASGTATNMQFL 296

Query: 241 DIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSFP 300
           DIIMVNV NPILIDQEYCPWNQCNR++PSKIKISKVSF+NIRGS ATPVAIKLICSR  P
Sbjct: 297 DIIMVNVSNPILIDQEYCPWNQCNRKIPSKIKISKVSFKNIRGSCATPVAIKLICSRHLP 356

Query: 301 CEEVKFRDIDLTPNGITGPITSQCTN 306
           C+EVK  DIDLT NGI GPITSQCTN
Sbjct: 357 CDEVKVGDIDLTYNGIKGPITSQCTN 382

[Close]

BLAST of CmoCh11G018480 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 360.9 bits (925), Expect = 1.0e-99
Identity = 169/327 (51.68%), Postives = 220/327 (67.28%), Query Frame = 0


Query: 2   ACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAP-KALPG-DNWIIFAHID 61
           AC S   S +VIP G F++ E    GPCK  I+  L GT++A   A+ G + W++F +ID
Sbjct: 46  ACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEKWVVFGNID 105

Query: 62  RLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHIN 121
              ++GGG FDG+G  AW  N+CHK   C +LP+                     NFHIN
Sbjct: 106 GFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSIDAKNFHIN 165

Query: 122 VLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVA 181
           VLG  N+T +NI I+AP +SPNTDGIH+GRS+ + I  S I+TGDDCIS+GDG + + V 
Sbjct: 166 VLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVE 225

Query: 182 NVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHF 241
            VTCGPGHGISVGSLGRY +E+ V G+ V NCT+  T NG+RIKTWP +A   TA+D+HF
Sbjct: 226 KVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACSTTASDIHF 285

Query: 242 LDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSF 301
            DII+ +V NPILIDQEYCPWNQCN+Q  S IK+  +SF+NIRG+S    A+KL+CS+ +
Sbjct: 286 EDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGY 345

Query: 302 PCEEVKFRDIDLTPNGITGPITSQCTN 306
           PC+ V+  DID+  NG  GP T  C+N
Sbjct: 346 PCQNVEIGDIDIKYNGADGPATFHCSN 372

[Close]

BLAST of CmoCh11G018480 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 356.7 bits (914), Expect = 1.9e-98
Identity = 167/327 (51.07%), Postives = 218/327 (66.67%), Query Frame = 0


Query: 2   ACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAP-KALPG-DNWIIFAHID 61
           AC +  +S +VI  G F++ E    GPCK  ++  L GTL+A  KA+ G + W++F  I+
Sbjct: 47  ACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERWVVFLRIN 106

Query: 62  RLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHIN 121
              ++GGG+FDG+G  AW  N+CHK   C +LP+                     NFHIN
Sbjct: 107 GFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSIDAKNFHIN 166

Query: 122 VLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVA 181
           VLG  N+TF N+ +IAP  SPNTDGIH+GRS  + I  SKIATGDDCIS+GDG + + V 
Sbjct: 167 VLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDGMKNLHVE 226

Query: 182 NVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHF 241
           NV CGPGHGISVGSLGRY +E+ V G+ V NCT+  T NG+RIKTWP +A   TA+ +HF
Sbjct: 227 NVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACATTASGIHF 286

Query: 242 LDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSF 301
            +II+ NV NPILIDQEYCPWNQCN+Q PS IK+  +SF+NIRG+S    A+KL+CS++ 
Sbjct: 287 ENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAH 346

Query: 302 PCEEVKFRDIDLTPNGITGPITSQCTN 306
           PC  V+  +I+L   G  GP T  C+N
Sbjct: 347 PCANVEIGNINLEYKGADGPPTFMCSN 373

[Close]

BLAST of CmoCh11G018480 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 349.4 bits (895), Expect = 3.0e-96
Identity = 160/327 (48.93%), Postives = 219/327 (66.97%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKALPG-DNWIIFAHID 60
           +AC     S ++IP G +++ E    GPCK  I   L GT++A     G + W+ F +I+
Sbjct: 46  EACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKWVAFRNIN 105

Query: 61  RLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHIN 120
              ++GGGVFDG+G  AW  N+CHK  NC +LP+                     +FHIN
Sbjct: 106 GFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDAKHFHIN 165

Query: 121 VLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVA 180
           V+G  N+TF ++ IIAP  SPNTDGIH+GRS+ I I  S I+TGDDC+S+GDG + + V 
Sbjct: 166 VIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGMKNLLVE 225

Query: 181 NVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHF 240
            VTCGPGHGIS+GSLGRY++EE V G+ + NCT+  T NG+RIKTWP +A   TA+D+HF
Sbjct: 226 RVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTTASDIHF 285

Query: 241 LDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSF 300
            +I++ NV NPILIDQEYCPWNQCN+Q PS IK++ +SF+ IRG+S    A+KL+CS+ +
Sbjct: 286 ENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKLLCSKGY 345

Query: 301 PCEEVKFRDIDLTPNGITGPITSQCTN 306
           PC+ V+  D+++   G  GP T QC+N
Sbjct: 346 PCQNVEVGDVNIQYTGADGPATFQCSN 372

[Close]

BLAST of CmoCh11G018480 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 344.7 bits (883), Expect = 7.4e-95
Identity = 160/327 (48.93%), Postives = 216/327 (66.06%), Query Frame = 0


Query: 2   ACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAP-KALPG-DNWIIFAHID 61
           AC S     +VIP G F++ E   +GPCK+ ++  L GT+ A   ++ G + W++F  +D
Sbjct: 47  ACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKWVVFQRMD 106

Query: 62  RLTVSGGGVFDGQGKEAWGKNDCHKRINCAQLPV---------------------NFHIN 121
              ++GGG FDG+G  AW  N+CHK   C +LP+                     NFHIN
Sbjct: 107 GFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSIDAKNFHIN 166

Query: 122 VLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQIEVA 181
           V+G  N+TF N+ I+AP  SPNTDGIH+GRS  ++I  S+I+TGDDC+S+GDG   + V 
Sbjct: 167 VIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVK 226

Query: 182 NVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTATDMHF 241
           NV CGPGHGISVGSLGRY +E+ V G+ V NCT+  T NG+RIKTWP +A   TA+++HF
Sbjct: 227 NVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHF 286

Query: 242 LDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLICSRSF 301
            +II+ NV NPILIDQEYCPWNQCN+Q  S IK++ +SF  IRG+S    A+KL+CS+ +
Sbjct: 287 ENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGY 346

Query: 302 PCEEVKFRDIDLTPNGITGPITSQCTN 306
           PCE V+  DI++   G  GP T  C+N
Sbjct: 347 PCENVQVGDINIQYTGADGPATFMCSN 373

[Close]

BLAST of CmoCh11G018480 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 1.0e-88
Identity = 160/331 (48.34%), Postives = 207/331 (62.54%), Query Frame = 0


Query: 1   DACASGRSSAIVIPGGTFEVREGNFAGPCKNRIDFQLGGTLRAPKAL----PGDNWIIFA 60
           +ACA+G  S I +P G + V    F GPCK  +  +L G  +AP  +    P   WI F 
Sbjct: 96  EACAAG--STITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFE 155

Query: 61  HIDRLTVSGG-GVFDGQGKEAWGKNDCHKRINCAQLPVN--------------------- 120
           ++   T++G   +FDGQG  AW  NDC K   C  LP+N                     
Sbjct: 156 NLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKL 215

Query: 121 FHINVLGCNNLTFHNINIIAPGNSPNTDGIHIGRSNKITITKSKIATGDDCISLGDGSRQ 180
           FH+N+L C N+T  +I I AP  S NTDGIHIGRSN + +  +KI TGDDC+S+GDG+  
Sbjct: 216 FHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTEN 275

Query: 181 IEVANVTCGPGHGISVGSLGRYTNEEPVEGVLVKNCTMINTTNGVRIKTWPGSAAGGTAT 240
           + V NV CGPGHGIS+GSLGRY NE+PV+GV V+ C + NT NGVRIKTWPGS   G A+
Sbjct: 276 LIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPP-GIAS 335

Query: 241 DMHFLDIIMVNVGNPILIDQEYCPWNQCNRQVPSKIKISKVSFENIRGSSATPVAIKLIC 300
           ++ F DI M NV  P+LIDQEYCP+  C   VPSK+K+S V+ +NI+G+SAT VA+KL+C
Sbjct: 336 NILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMC 395

Query: 301 SRSFPCEEVKFRDIDLTPNGITGPITSQCTN 306
           S+  PC  +   DI+L  NG  GP  S C+N
Sbjct: 396 SKGVPCTNIALSDINLVHNGKEGPAVSACSN 423

The following BLAST results are available for this feature:

BLAST of CmoCh11G018480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	3.7e-99	54.85	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q39766	8.0e-94	49.85	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	8.0e-94	49.85	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q6H9K0	2.6e-92	48.94	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
P35337	9.7e-92	48.62	Polygalacturonase OS=Brassica napus OX=3708 PE=2 SV=1	[more]

BLAST of CmoCh11G018480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJR5	9.2e-178	93.56	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111435131 PE=3 SV=...	[more]
A0A6J1EJC2	9.2e-178	93.56	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111435132 PE=3 SV=...	[more]
A0A6J1EXI6	9.2e-178	93.56	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111437086 PE=3 SV=...	[more]
A0A6J1ES70	4.6e-177	93.25	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111437085 PE=3 SV=...	[more]
A0A6J1EPU1	9.0e-149	78.53	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111436520 PE=3 SV=...	[more]

BLAST of CmoCh11G018480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	1.0e-99	51.68	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	1.9e-98	51.07	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	3.0e-96	48.93	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	7.4e-95	48.93	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	1.0e-88	48.34	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 129..150 e-value: 770.0 score: 8.0 coord: 182..203 e-value: 1.2 score: 18.2 coord: 102..128 e-value: 19.0 score: 14.2
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 94..305 e-value: 5.7E-74 score: 249.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 159..172
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 1..301 e-value: 5.8E-87 score: 293.7
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 94..305
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 94..305 coord: 1..89
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..89
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 1..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G018480.1	CmoCh11G018480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity