CmoCh11G017660 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G017660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	auxin-responsive protein SAUR68-like
Location	Cmo_Chr11: 12444671 .. 12445111 (-)
RNA-Seq Expression	CmoCh11G017660
Synteny	CmoCh11G017660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAACTCCCCCCAAAACCCTAATTAAAATTGCCCGGAAGTGGCAGAAGGTGGCGGCCGCCGCCGAGCGCCGCCGGAAGATCTCGCTGCCAAGATCAAGAAGCTCCTCCACGGTGGCCGATAAGGGTCATTTTGTGGTCTACACGGTGGATCAAAAACGGTGTGTTTTGCCGTTGAGGTATTTGGGGAGCTATGTTTTGAGGGAGTTGTTGAAGATGTCGGAGGAGGAGTTTGGTCTGCCGGCGGATGGTCCCATAAAGCTGCCGTGTGAGGCGGCGTTTATGGAGTATGCTGTGTATTTGATACGACGACATGTCGACCTTGAAGTGGAACGTGCTCTGGTTTTGTCGGTTGCTCCTGCAGCGAAATTGTCGTGTGGTTCTAGTTTGTTTTGGTCGGCGGCGCCCGCGGCGGAAGATGGCCGGCCGGTGATGATTTAA

mRNA sequence

ATGGTAACTCCCCCCAAAACCCTAATTAAAATTGCCCGGAAGTGGCAGAAGGTGGCGGCCGCCGCCGAGCGCCGCCGGAAGATCTCGCTGCCAAGATCAAGAAGCTCCTCCACGGTGGCCGATAAGGGTCATTTTGTGGTCTACACGGTGGATCAAAAACGGTGTGTTTTGCCGTTGAGGTATTTGGGGAGCTATGTTTTGAGGGAGTTGTTGAAGATGTCGGAGGAGGAGTTTGGTCTGCCGGCGGATGGTCCCATAAAGCTGCCGTGTGAGGCGGCGTTTATGGAGTATGCTGTGTATTTGATACGACGACATGTCGACCTTGAAGTGGAACGTGCTCTGGTTTTGTCGGTTGCTCCTGCAGCGAAATTGTCGTGTGGTTCTAGTTTGTTTTGGTCGGCGGCGCCCGCGGCGGAAGATGGCCGGCCGGTGATGATTTAA

Coding sequence (CDS)

ATGGTAACTCCCCCCAAAACCCTAATTAAAATTGCCCGGAAGTGGCAGAAGGTGGCGGCCGCCGCCGAGCGCCGCCGGAAGATCTCGCTGCCAAGATCAAGAAGCTCCTCCACGGTGGCCGATAAGGGTCATTTTGTGGTCTACACGGTGGATCAAAAACGGTGTGTTTTGCCGTTGAGGTATTTGGGGAGCTATGTTTTGAGGGAGTTGTTGAAGATGTCGGAGGAGGAGTTTGGTCTGCCGGCGGATGGTCCCATAAAGCTGCCGTGTGAGGCGGCGTTTATGGAGTATGCTGTGTATTTGATACGACGACATGTCGACCTTGAAGTGGAACGTGCTCTGGTTTTGTCGGTTGCTCCTGCAGCGAAATTGTCGTGTGGTTCTAGTTTGTTTTGGTCGGCGGCGCCCGCGGCGGAAGATGGCCGGCCGGTGATGATTTAA

Protein sequence

MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLRYLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPAAKLSCGSSLFWSAAPAAEDGRPVMI

Homology

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BLAST of CmoCh11G017660 vs. ExPASy Swiss-Prot
Match: Q9C7Q8 (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana OX=3702 GN=SAUR62 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.4e-25
Identity = 62/124 (50.00%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRS---RSSSTVADKGHFVVYTVDQKRCVL 60
           M+   K L+K+A+KWQ+   AA +R++IS  RS    SS T  +KG FVVYT D+ R   
Sbjct: 1   MMINAKKLMKLAKKWQQ--RAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSF 60

Query: 61  PLRYLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLS 120
           PL YL + +++ELLK+SEEEFGLP +GPI LP ++AF+EY + LI+R +D + E+AL+LS
Sbjct: 61  PLSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLS 120

Query: 121 VAPA 122
           ++ A
Sbjct: 121 ISSA 122

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BLAST of CmoCh11G017660 vs. ExPASy Swiss-Prot
Match: Q0V7Z5 (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana OX=3702 GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 6   KTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLRYLGSY 65
           K LIK+A+KWQ+ AA   +R       S +SST A+KG FVVYT D  R   PL YL + 
Sbjct: 5   KKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSYLSNS 64

Query: 66  VLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPA 122
           V +ELLK+SEEEFGLP  GPI  P ++ F+EY + L++R +D + E+AL++S++ A
Sbjct: 65  VFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

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BLAST of CmoCh11G017660 vs. ExPASy Swiss-Prot
Match: Q6NMM0 (Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana OX=3702 GN=SAUR61 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-24
Identity = 62/129 (48.06%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 6   KTLIKIARKWQKVAAAAERRRKISLPRS---RSSSTVADKGHFVVYTVDQKRCVLPLRYL 65
           K L+K+A+KWQ+   AA RR++IS  RS    SSST A+KG FVVYT D+ R   P+ YL
Sbjct: 5   KKLLKMAKKWQQ--RAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPISYL 64

Query: 66  GSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPA- 125
            + V++ELLK+SEEEFG+P +GPI LP ++ F+EY + L++R +D + E+AL+ S++   
Sbjct: 65  SNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISSTR 124

Query: 126 AKLSCGSSL 131
             L C   L
Sbjct: 125 CSLPCSFQL 131

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BLAST of CmoCh11G017660 vs. ExPASy Swiss-Prot
Match: F4I1H5 (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana OX=3702 GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-24
Identity = 61/119 (51.26%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 6   KTLIKIARKWQKVAAAAERRRKISLPRS---RSSSTVADKGHFVVYTVDQKRCVLPLRYL 65
           K L+K+A+KWQ+   AA  R++IS  RS    SSS+  +KG FVVYT D+ R   P+ YL
Sbjct: 5   KKLMKMAKKWQQ--RAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPISYL 64

Query: 66  GSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPA 122
            + V++ELLK+SEE+FGLP +GPI LP ++AF+EY V LI+R +D + E+AL+LS++ A
Sbjct: 65  SNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISSA 121

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BLAST of CmoCh11G017660 vs. ExPASy Swiss-Prot
Match: F4I1I4 (Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana OX=3702 GN=SAUR67 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 7.1e-24
Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSR---SSSTVADKGHFVVYTVDQKRCVL 60
           M+   K L+K+A+KWQ+   AA  R++IS  RS    SSS+  +KG FVVYT D+ R   
Sbjct: 1   MMINAKKLMKMAKKWQQ--RAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAF 60

Query: 61  PLRYLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLS 120
           P+ YL + +++ELLK+SEEEFGLP +GPI LP ++ F+EY + LI+R +D + E+AL++S
Sbjct: 61  PISYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMS 120

Query: 121 VAPAAKLSCGSSL 131
           ++ +AK S   SL
Sbjct: 121 IS-SAKCSLQCSL 130

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BLAST of CmoCh11G017660 vs. ExPASy TrEMBL
Match: A0A6J1ERS1 (auxin-responsive protein SAUR68-like OS=Cucurbita moschata OX=3662 GN=LOC111435273 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 1.0e-73
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR
Sbjct: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP
Sbjct: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           AAKLSCGSSLFWSAAPAAEDGRPVMI
Sbjct: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 146

[Close]

BLAST of CmoCh11G017660 vs. ExPASy TrEMBL
Match: A0A6J1JK75 (auxin-responsive protein SAUR68-like OS=Cucurbita maxima OX=3661 GN=LOC111486531 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.8e-71
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVTP KTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPL 
Sbjct: 1   MVTPSKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLM 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP
Sbjct: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           AAKLSCGS+LFWSAAP AEDGRPVMI
Sbjct: 121 AAKLSCGSNLFWSAAPTAEDGRPVMI 146

[Close]

BLAST of CmoCh11G017660 vs. ExPASy TrEMBL
Match: A0A5D3DI83 (Auxin-responsive protein SAUR68-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G004050 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 118/146 (80.82%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVT PKTL+K+ARKWQ VA A   +R+ISLPR+RSSS+V +KGHFVVYTVDQKRCVLP+R
Sbjct: 1   MVT-PKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLG+YVL+ELLKMSEEEFGLPADGPIKLPCEAAFMEY VYLI+RHVDLEV++ALVLSVAP
Sbjct: 61  YLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           A K SC SSLF S AP AE+GRPVMI
Sbjct: 121 AMKCSCDSSLFSSTAPVAENGRPVMI 145

[Close]

BLAST of CmoCh11G017660 vs. ExPASy TrEMBL
Match: A0A1S4DXM8 (auxin-responsive protein SAUR68-like OS=Cucumis melo OX=3656 GN=LOC107990918 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 118/146 (80.82%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVT PKTL+K+ARKWQ VA A   +R+ISLPR+RSSS+V +KGHFVVYTVDQKRCVLP+R
Sbjct: 1   MVT-PKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLG+YVL+ELLKMSEEEFGLPADGPIKLPCEAAFMEY VYLI+RHVDLEV++ALVLSVAP
Sbjct: 61  YLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           A K SC SSLF S AP AE+GRPVMI
Sbjct: 121 AMKCSCDSSLFSSTAPVAENGRPVMI 145

[Close]

BLAST of CmoCh11G017660 vs. ExPASy TrEMBL
Match: A0A0A0K2P5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018810 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56
Identity = 116/146 (79.45%), Postives = 130/146 (89.04%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVT P+TL+K+ARKWQ VA A   RR+ISLPR+RSSS+VA+KGHFVVYTVDQKRCVLP+R
Sbjct: 1   MVT-PRTLLKLARKWQMVAVAGNGRRRISLPRTRSSSSVANKGHFVVYTVDQKRCVLPIR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLG+YVL+ELLKMSEEEFGLPADGPIKLPCEAAFMEY VYLIRRHVD+EV++ALVLSV P
Sbjct: 61  YLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIRRHVDIEVQQALVLSVVP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           A K  C SS F SAAP AE+ RPVMI
Sbjct: 121 AVKCCCDSSSFSSAAPVAENDRPVMI 145

[Close]

BLAST of CmoCh11G017660 vs. NCBI nr
Match: XP_022928475.1 (auxin-responsive protein SAUR68-like [Cucurbita moschata])

HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR
Sbjct: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP
Sbjct: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           AAKLSCGSSLFWSAAPAAEDGRPVMI
Sbjct: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 146

[Close]

BLAST of CmoCh11G017660 vs. NCBI nr
Match: XP_023529808.1 (auxin-responsive protein SAUR68-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 4.7e-73
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR
Sbjct: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP
Sbjct: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           AAKLSCGS+LFWSAAPAAEDGRPVMI
Sbjct: 121 AAKLSCGSNLFWSAAPAAEDGRPVMI 146

[Close]

BLAST of CmoCh11G017660 vs. NCBI nr
Match: KAG6589034.1 (Auxin-responsive protein SAUR66, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022749.1 Auxin-responsive protein SAUR66, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 283.1 bits (723), Expect = 1.4e-72
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR
Sbjct: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP
Sbjct: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           AAKLSCGS+LFWSAAP AEDGRPVMI
Sbjct: 121 AAKLSCGSNLFWSAAPTAEDGRPVMI 146

[Close]

BLAST of CmoCh11G017660 vs. NCBI nr
Match: XP_022989486.1 (auxin-responsive protein SAUR68-like [Cucurbita maxima])

HSP 1 Score: 277.7 bits (709), Expect = 5.7e-71
Identity = 142/146 (97.26%), Postives = 143/146 (97.95%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVTP KTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPL 
Sbjct: 1   MVTPSKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLM 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP
Sbjct: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           AAKLSCGS+LFWSAAP AEDGRPVMI
Sbjct: 121 AAKLSCGSNLFWSAAPTAEDGRPVMI 146

[Close]

BLAST of CmoCh11G017660 vs. NCBI nr
Match: XP_016900470.1 (PREDICTED: auxin-responsive protein SAUR68-like [Cucumis melo] >KAA0040360.1 auxin-responsive protein SAUR68-like [Cucumis melo var. makuwa] >TYK23344.1 auxin-responsive protein SAUR68-like [Cucumis melo var. makuwa])

HSP 1 Score: 232.3 bits (591), Expect = 2.7e-57
Identity = 118/146 (80.82%), Postives = 132/146 (90.41%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLR 60
           MVT PKTL+K+ARKWQ VA A   +R+ISLPR+RSSS+V +KGHFVVYTVDQKRCVLP+R
Sbjct: 1   MVT-PKTLVKLARKWQTVAVAGNGQRRISLPRTRSSSSVVNKGHFVVYTVDQKRCVLPIR 60

Query: 61  YLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAP 120
           YLG+YVL+ELLKMSEEEFGLPADGPIKLPCEAAFMEY VYLI+RHVDLEV++ALVLSVAP
Sbjct: 61  YLGNYVLKELLKMSEEEFGLPADGPIKLPCEAAFMEYIVYLIQRHVDLEVQQALVLSVAP 120

Query: 121 AAKLSCGSSLFWSAAPAAEDGRPVMI 147
           A K SC SSLF S AP AE+GRPVMI
Sbjct: 121 AMKCSCDSSLFSSTAPVAENGRPVMI 145

[Close]

BLAST of CmoCh11G017660 vs. TAIR 10
Match: AT1G29430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.8 bits (286), Expect = 5.9e-26
Identity = 62/124 (50.00%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRS---RSSSTVADKGHFVVYTVDQKRCVL 60
           M+   K L+K+A+KWQ+   AA +R++IS  RS    SS T  +KG FVVYT D+ R   
Sbjct: 1   MMINAKKLMKLAKKWQQ--RAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSF 60

Query: 61  PLRYLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLS 120
           PL YL + +++ELLK+SEEEFGLP +GPI LP ++AF+EY + LI+R +D + E+AL+LS
Sbjct: 61  PLSYLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLS 120

Query: 121 VAPA 122
           ++ A
Sbjct: 121 ISSA 122

[Close]

BLAST of CmoCh11G017660 vs. TAIR 10
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 6   KTLIKIARKWQKVAAAAERRRKISLPRSRSSSTVADKGHFVVYTVDQKRCVLPLRYLGSY 65
           K LIK+A+KWQ+ AA   +R       S +SST A+KG FVVYT D  R   PL YL + 
Sbjct: 5   KKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSYLSNS 64

Query: 66  VLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPA 122
           V +ELLK+SEEEFGLP  GPI  P ++ F+EY + L++R +D + E+AL++S++ A
Sbjct: 65  VFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

[Close]

BLAST of CmoCh11G017660 vs. TAIR 10
Match: AT1G29440.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 61/119 (51.26%), Postives = 87/119 (73.11%), Query Frame = 0


Query: 6   KTLIKIARKWQKVAAAAERRRKISLPRS---RSSSTVADKGHFVVYTVDQKRCVLPLRYL 65
           K L+K+A+KWQ+   AA  R++IS  RS    SSS+  +KG FVVYT D+ R   P+ YL
Sbjct: 5   KKLMKMAKKWQQ--RAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPISYL 64

Query: 66  GSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPA 122
            + V++ELLK+SEE+FGLP +GPI LP ++AF+EY V LI+R +D + E+AL+LS++ A
Sbjct: 65  SNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISSA 121

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BLAST of CmoCh11G017660 vs. TAIR 10
Match: AT1G29420.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 62/129 (48.06%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 6   KTLIKIARKWQKVAAAAERRRKISLPRS---RSSSTVADKGHFVVYTVDQKRCVLPLRYL 65
           K L+K+A+KWQ+   AA RR++IS  RS    SSST A+KG FVVYT D+ R   P+ YL
Sbjct: 5   KKLLKMAKKWQQ--RAALRRKRISFHRSTDTTSSSTAAEKGCFVVYTSDRIRFAFPISYL 64

Query: 66  GSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLSVAPA- 125
            + V++ELLK+SEEEFG+P +GPI LP ++ F+EY + L++R +D + E+AL+ S++   
Sbjct: 65  SNSVIQELLKISEEEFGIPTEGPITLPFDSVFLEYLIRLVQRRMDGDTEKALITSISSTR 124

Query: 126 AKLSCGSSL 131
             L C   L
Sbjct: 125 CSLPCSFQL 131

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BLAST of CmoCh11G017660 vs. TAIR 10
Match: AT1G29510.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-25
Identity = 63/133 (47.37%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 1   MVTPPKTLIKIARKWQKVAAAAERRRKISLPRSR---SSSTVADKGHFVVYTVDQKRCVL 60
           M+   K L+K+A+KWQ+   AA  R++IS  RS    SSS+  +KG FVVYT D+ R   
Sbjct: 1   MMINAKKLMKMAKKWQQ--RAALHRKRISFQRSNVFTSSSSTVEKGCFVVYTADKIRFAF 60

Query: 61  PLRYLGSYVLRELLKMSEEEFGLPADGPIKLPCEAAFMEYAVYLIRRHVDLEVERALVLS 120
           P+ YL + +++ELLK+SEEEFGLP +GPI LP ++ F+EY + LI+R +D + E+AL++S
Sbjct: 61  PISYLSNSIVQELLKISEEEFGLPTEGPITLPFDSVFLEYLIKLIQRRMDGDTEKALLMS 120

Query: 121 VAPAAKLSCGSSL 131
           ++ +AK S   SL
Sbjct: 121 IS-SAKCSLQCSL 130

The following BLAST results are available for this feature:

BLAST of CmoCh11G017660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7Q8	8.4e-25	50.00	Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana OX=3702 GN=SAUR62 PE=2 S...	[more]
Q0V7Z5	1.9e-24	49.14	Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana OX=3702 GN=SAUR64 PE=2 S...	[more]
Q6NMM0	3.2e-24	48.06	Auxin-responsive protein SAUR61 OS=Arabidopsis thaliana OX=3702 GN=SAUR61 PE=2 S...	[more]
F4I1H5	3.2e-24	51.26	Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana OX=3702 GN=SAUR63 PE=2 S...	[more]
F4I1I4	7.1e-24	47.37	Auxin-responsive protein SAUR67 OS=Arabidopsis thaliana OX=3702 GN=SAUR67 PE=2 S...	[more]

BLAST of CmoCh11G017660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERS1	1.0e-73	100.00	auxin-responsive protein SAUR68-like OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1JK75	2.8e-71	97.26	auxin-responsive protein SAUR68-like OS=Cucurbita maxima OX=3661 GN=LOC111486531...	[more]
A0A5D3DI83	1.3e-57	80.82	Auxin-responsive protein SAUR68-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S4DXM8	1.3e-57	80.82	auxin-responsive protein SAUR68-like OS=Cucumis melo OX=3656 GN=LOC107990918 PE=...	[more]
A0A0A0K2P5	2.5e-56	79.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018810 PE=3 SV=1	[more]

BLAST of CmoCh11G017660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928475.1	2.1e-73	100.00	auxin-responsive protein SAUR68-like [Cucurbita moschata]	[more]
XP_023529808.1	4.7e-73	99.32	auxin-responsive protein SAUR68-like [Cucurbita pepo subsp. pepo]	[more]
KAG6589034.1	1.4e-72	98.63	Auxin-responsive protein SAUR66, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022989486.1	5.7e-71	97.26	auxin-responsive protein SAUR68-like [Cucurbita maxima]	[more]
XP_016900470.1	2.7e-57	80.82	PREDICTED: auxin-responsive protein SAUR68-like [Cucumis melo] >KAA0040360.1 aux...	[more]

BLAST of CmoCh11G017660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29430.1	5.9e-26	50.00	SAUR-like auxin-responsive protein family	[more]
AT1G29450.1	1.3e-25	49.14	SAUR-like auxin-responsive protein family	[more]
AT1G29440.1	2.3e-25	51.26	SAUR-like auxin-responsive protein family	[more]
AT1G29420.1	2.3e-25	48.06	SAUR-like auxin-responsive protein family	[more]
AT1G29510.1	5.0e-25	47.37	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..101 e-value: 1.6E-26 score: 92.3
None	No IPR available	PANTHER	PTHR31175:SF50	AUXIN-RESPONSIVE PROTEIN SAUR62-RELATED	coord: 5..126
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 5..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G017660.1	CmoCh11G017660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
molecular_function	GO:0016491	oxidoreductase activity