CmoCh11G016820 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCTCTCTCTCTCTCTCTCTCTCGCTTCCATTTTCACATTCAGATTTCTCGCGAATTCGAGAGGTAATCAATTTTCAGATCCATCTCTTTTCATTTTCCATTTCTCAAATTCGGTTCCGCAGAATCGCTGGAAGATCTTTAGTTGATCTGAAGTTGTAACGGATTCATTTATCCATTATTCTGGTTGATTGCTAATTGTCGTCGTAATATTAGAATGCTTGTTGGTTTCATTGATTTGTGGTTTAATTTTTCATGATATGTGAAGAATTTTCGTACCTTGTTGTTTCGATATGTGTTGTTGGTTGCCGAATCAATTCCATGTCTGTTCTATGGGAAATCACCTTGGATTGGTTTGAATCCTCATTGCGTGGTTTAAGTGTCATTAGGGGGGTCAGCAGGGACAAAGTGTTGTGGAAATTTACGTTTATTTGGTGGTTCATTGCGGTTTTGCTTTTCGCTTCTTCTTTTCAGGCCGTTGATTTTGATTCACGATAATTCATTGGATGTTCGTTGTTGGAGATCTATTTGGTTCATTTCAAATGATTGAAAATGTTTGATTCCTGATTCTGTGTTTTCTTGCTCGCCAGTGCTGTGGTTGTTGCTCAGATAGAAGGAAGCCAAAATGGGGTTGAACTTTACGAAGCTGTTCGGTAAGCTTTTTTCTAAGAAAGAGATGCGCATTTTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACGATCTTGTACAAGCTAAAGCTCGGAGAAATTGTGACCACTATCCCGACCATCGGTGAGTCTTATCCTGTAAAATGAATTTTTTGAGGAACTTTGGAAATTGAGAACTCAGCTGTAGAATCAAGCTATGTACAATTTTAATAATTTGATTAAATCCATCTTATGGAAGTCATAGATGTAAGACTCGATACTTTTCTACAGGATTTAATGTGGAGACTGTGGAATACAAGAACATCAGCTTTACTGTTTGGGACGTTGGTGGTCAGGACAAGGTATGCATCTCCTTATTCCTGTATGTGTGTGGAAAAAACAAGACACTTTCTGCTTTTCACCATGTTTAAGACACTAGTCCATTTATTTCGTATTTAGTATCAACATAGAATTTTACTTCTTTAATTGTTTTATCCTCCTGGTATGCATGAAGATGTTGATGCATTAGTAAATTTAGAGGTCTTCATGGGGCACGGACAGGGAAGTGTTCCCCGTCTCTATCCCCACCACCTATTTTATTCTCCATTCCCACAAAATTCTCCATTTATTTTTGTGGGAATCGGGACAGAGATTCCGGGGAAAGTTGAGGGAATTAGATCCGGTAGATAATTTTAACCCGTTTGTTATTTTTTTAATAAAATAGTTATTTTGAAGTTTTCATTTTTCAATATAATCTTTATTGAATAAAATGGTAAAAAAATCCTAATAAATCAATATATTTTATAAACAAACGTATATATAATGTTCTACCAACACAATTTTTGGAAATCCTAATTTTAATATTTCAACCTGGTCTTTCAAATTAAAAAAATCTACCACATAGTTTTTAATTTAAATATTAAAATTAGAGTCTCAAAATTAACTAATTAATGTGTTGAAAATATATTTATATTAACCGAAATGGGGACGGGGCGGGTCCCTACGGATAAAATGGACATCTCTAGATAAATTGCTATTTGGAGTTAGATTTAAAGGAGAAAATGCTAACTTTCAATACAATGCTTTTGATTTGTTATGTTTGATATATGAAACAATGTAATATAAAAACCACAATAAATTCTAAAGCAGTGACGAAGTATGGGCTCTAACTTGGCATATTGCATGCATGTTATTATTATCTTAATTCAATCATATAATATATTTTTGCATTATAAAGACTAAAATGCTGACATTTTCTAGAACGAGGACTGTGCATGGATAGTATGTTCACATATTGTTTAATTAAAAATTTCCCAAGAATTTTTCTGTACGATTATTTTTAATTGATGTTTGATTGATGGGGTTTCTTTTTGAAAGATCCGTCCACTTTGGAGGCATTACTTCCAGAATACACAGGGCCTTATTTTTGTTGTGGATAGCAATGATAGGGACCGAGTCGTAGAGGCAAGAGATGAGCTGCACAGGATGTTGAATGAAGTATGTTTTTACTTCCGAATGCTCTTATATTTTATTTTCTATATCAACTTAATTGGCAATTTCCCCTACTTTTGATGGACTATTGCTGTGTACTGATGTATAGCTTGCTTTTGTTCGTAATGTATCCGAATTTTACTCTATTTCTCTAATCCTTGCTGAATTCTTTCATTCGTCATAATTTCTGATATGGGATTTCGTTTTGTGAAAGACAATTTTTAGAAACTATTTTATCGTAACTAAGGACCAGGATTTTTCTAGAGTTTGCTTCAAGACCGTTAGTTCAGTTGCCGAAGCCTTTATTTGTATTCGTTTGCCAAATCTTGTTCAGTTCCAAGAACGGAATTTGTAGTAAGAAAGAAGTTTTAGCTAAATTTGGCAATCTAATTTGTTGTTTGGTTTTGATCTTCTTCCATATGTGTTTGTTTTTTTCCCTTCTTTCTGTCATTTGAAAGTAGGATTGATATAGATCTCTTGTATTGCTAATCTTTTTGTTCGGCATATATATATTAGTATTGCTGATTTGTTGTGACATTTAGTGGGTATCTCATAAAATGCTGAATCTGGTTGCAGGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCTAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAACTCGGTCTTCACTCCCTTCGTCAGCGCCACTGGTAAATTAAACCACTTGAAAGTGAAAAGAATGCTAAGAACAAATTTTTTTCTTTTTTGGAAGTGTTTAAACTAATAGGTATGTCAAACTCAAACAAACCCAATTTTTGAATCATGATCTAAAAATTAAACCACTTGAATGAAAAGGATGCTAAGAACAAATTTTTTCTTTTTTGGAAGTGTTTAAACTAATAGGTATGTCAAACTCAAACAAACTCAAGTCTTGAATCATGATCTAAATGTACTCTGAGATCCCACGTTGGTTGGAGAGGAGAACAGAATACCCTTTATAAGAACGTGGAAACCTCTCCCTAGCCGACATTTTAAAAACCTTAAAGAGAAGCCTAAAAGGGAAAGTCGAAAGAGGACAACATCTACTGGCGGTGGACTTGAGCCGTTACATGTACTCTTTCGTATGTTAATGAATTGGACTGTTTACTAGACTCATGAAGTAGGAAGAGTGAGTTTCAAGCTCGAGCTCTGTCAGGGTACAGAAGAAAGTCGACAGAATATTTTCTAGTTTCTTTTGAAGTTGCTGGGTGAGATGATAAAGTGATATAAACAAACTCATTTTACACGGTGTTGCCTTCCCTTCCAGGTACATCCAGAGCACCTGCGCCACATCTGGAGAGGGCCTATACGAAGGTTTGGACTGGCTTTCCAACAACATCGTTAGCAAGGTAAATGCACCTTACATTTGATCCCAATCTTAATTGAATATCCATTCTTTTAGGCCCTTGAGTTCTGAATTACTGTGCTTTGTTCCAAAATTCCATCCATTCTTTTTTTAACATTTTTCTATTTTAGGTTAAATCACATGTTTCGGTCCTTGAACTTAAAAAATGTCTAATAGAGGTCATTAAACTATTCAATTTGTGTCTAATATGTCCTTAAATTTTCACTTATATTGAATTAGTCCTTCATTCATTCAACATTTTTAAAATTTATAGATCTATAAGACACAAAGTCGAAAATTTATAATCTTGTTAGACACGAAAAATAAGTTCGAGACATGTTAAAAGTTCATGGACTTATTAGATATAAAATTGAAAGTTTAAAACTTCTTTTTTAAAATTTATAGACGTACTAGACACAAAATTGAAAGTTTTAGTATCTTATTAGACACTTTCTAAAATTCAAAGACAAAATATAGATACTCATCGAAGATTAGTCCGTCTATGAATTGAATTTGTAGTTCTACTTTATAAATCACAAAAGAATTGCATAATGCAAGTCTTTGCCTTTAATTTTTCATGGTCAGTTAACAGAAATATTGATTCACTCAACACATAGCTTCAAATACTTGTCATCGTCACCTGCCTAGTTCTAAATTTCTGTGCATGCATCACTTGTAACTATTAAACCCATTCTATTTCAAAACTTCCATTTTAATTTCAAAATTTGCATATAAACTATTTTAGTCATTTGCCTTCAATTTCTCATCGATCATTTAATAGAATTCTTAAACTTTGTTATTGAGTCAGTCATTCACTCTCCCTTTTTATTCAGGCTTGA CTCTCTCTCTCTCTCTCTCTCTCGCTTCCATTTTCACATTCAGATTTCTCGCGAATTCGAGAGTGCTGTGGTTGTTGCTCAGATAGAAGGAAGCCAAAATGGGGTTGAACTTTACGAAGCTGTTCGGTAAGCTTTTTTCTAAGAAAGAGATGCGCATTTTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACGATCTTGTACAAGCTAAAGCTCGGAGAAATTGTGACCACTATCCCGACCATCGGATTTAATGTGGAGACTGTGGAATACAAGAACATCAGCTTTACTGTTTGGGACGTTGGTGGTCAGGACAAGATCCGTCCACTTTGGAGGCATTACTTCCAGAATACACAGGGCCTTATTTTTGTTGTGGATAGCAATGATAGGGACCGAGTCGTAGAGGCAAGAGATGAGCTGCACAGGATGTTGAATGAAGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCTAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAACTCGGTCTTCACTCCCTTCGTCAGCGCCACTGGTACATCCAGAGCACCTGCGCCACATCTGGAGAGGGCCTATACGAAGGTTTGGACTGGCTTTCCAACAACATCGTTAGCAAGGCTTGA ATGGGGTTGAACTTTACGAAGCTGTTCGGTAAGCTTTTTTCTAAGAAAGAGATGCGCATTTTGATGGTTGGTCTTGATGCTGCTGGTAAGACCACGATCTTGTACAAGCTAAAGCTCGGAGAAATTGTGACCACTATCCCGACCATCGGATTTAATGTGGAGACTGTGGAATACAAGAACATCAGCTTTACTGTTTGGGACGTTGGTGGTCAGGACAAGATCCGTCCACTTTGGAGGCATTACTTCCAGAATACACAGGGCCTTATTTTTGTTGTGGATAGCAATGATAGGGACCGAGTCGTAGAGGCAAGAGATGAGCTGCACAGGATGTTGAATGAAGATGAGCTTAGAGATGCTGTTTTGCTTGTATTTGCTAACAAGCAAGATCTTCCTAATGCCATGAATGCTGCAGAAATAACTGACAAACTCGGTCTTCACTCCCTTCGTCAGCGCCACTGGTACATCCAGAGCACCTGCGCCACATCTGGAGAGGGCCTATACGAAGGTTTGGACTGGCTTTCCAACAACATCGTTAGCAAGGCTTGA MGLNFTKLFGKLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIVSKA Homology
BLAST of CmoCh11G016820 vs. ExPASy Swiss-Prot
Match: O48920 (ADP-ribosylation factor OS=Vigna unguiculata OX=3917 GN=ARF PE=2 SV=3) HSP 1 Score: 359.0 bits (920), Expect = 3.2e-98 Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 358.6 bits (919), Expect = 4.1e-98 Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy Swiss-Prot
Match: O48649 (ADP-ribosylation factor 1 OS=Salix bakko OX=72444 GN=ARF1 PE=2 SV=3) HSP 1 Score: 358.2 bits (918), Expect = 5.4e-98 Identity = 176/181 (97.24%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy Swiss-Prot
Match: P36397 (ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2) HSP 1 Score: 357.8 bits (917), Expect = 7.0e-98 Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2) HSP 1 Score: 357.5 bits (916), Expect = 9.2e-98 Identity = 174/181 (96.13%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy TrEMBL
Match: A0A6J1ER15 (ADP-ribosylation factor-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435102 PE=3 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy TrEMBL
Match: A0A6J1EK73 (ADP-ribosylation factor-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435102 PE=3 SV=1) HSP 1 Score: 367.1 bits (941), Expect = 4.3e-98 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy TrEMBL
Match: A0A6J1JPH4 (ADP-ribosylation factor-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486323 PE=3 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 5.6e-98 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy TrEMBL
Match: A0A6J1JF28 (ADP-ribosylation factor-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486323 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. ExPASy TrEMBL
Match: A0A0A0LD15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G837640 PE=3 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CmoCh11G016820 vs. NCBI nr
Match: XP_022928205.1 (ADP-ribosylation factor-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 368.6 bits (945), Expect = 3.0e-98 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. NCBI nr
Match: XP_022928204.1 (ADP-ribosylation factor-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 367.1 bits (941), Expect = 8.8e-98 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. NCBI nr
Match: XP_022989173.1 (ADP-ribosylation factor-like isoform X2 [Cucurbita maxima] >XP_023530506.1 ADP-ribosylation factor-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 366.7 bits (940), Expect = 1.2e-97 Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. NCBI nr
Match: XP_022989172.1 (ADP-ribosylation factor-like isoform X1 [Cucurbita maxima] >XP_023530505.1 ADP-ribosylation factor-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97 Identity = 179/180 (99.44%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CmoCh11G016820 vs. NCBI nr
Match: XP_011652281.1 (ADP-ribosylation factor 1 [Cucumis sativus] >XP_011652282.1 ADP-ribosylation factor 1 [Cucumis sativus] >XP_016899674.1 PREDICTED: ADP-ribosylation factor 1-like isoform X2 [Cucumis melo] >XP_022152141.1 ADP-ribosylation factor 1-like isoform X2 [Momordica charantia] >XP_031738095.1 ADP-ribosylation factor 1 [Cucumis sativus] >XP_038904024.1 ADP-ribosylation factor 1-like [Benincasa hispida] >XP_038904025.1 ADP-ribosylation factor 1-like [Benincasa hispida] >KGN59683.1 hypothetical protein Csa_002200 [Cucumis sativus]) HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97 Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0
BLAST of CmoCh11G016820 vs. TAIR 10
Match: AT5G14670.1 (ADP-ribosylation factor A1B ) HSP 1 Score: 359.8 bits (922), Expect = 1.3e-99 Identity = 175/180 (97.22%), Postives = 178/180 (98.89%), Query Frame = 0
BLAST of CmoCh11G016820 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F ) HSP 1 Score: 358.6 bits (919), Expect = 2.9e-99 Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. TAIR 10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein ) HSP 1 Score: 357.8 bits (917), Expect = 5.0e-99 Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. TAIR 10
Match: AT3G62290.1 (ADP-ribosylation factor A1E ) HSP 1 Score: 357.8 bits (917), Expect = 5.0e-99 Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmoCh11G016820 vs. TAIR 10
Match: AT3G62290.2 (ADP-ribosylation factor A1E ) HSP 1 Score: 357.8 bits (917), Expect = 5.0e-99 Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|