CmoCh11G016680 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G016680
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	LOB domain-containing protein
Location	Cmo_Chr11: 11836728 .. 11837243 (+)
RNA-Seq Expression	CmoCh11G016680
Synteny	CmoCh11G016680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTCCCGAACTGCGTTTTCGCGCCGTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAACGTTCACAAGATCTTCGGAGCTAGCAATGTCAGCAAACTACTAAACGAGGTCCAGCCACACCAACGAGAGGACGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCAAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGACGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCTGCCCCATCATCGTCGTCGTCATCGCAGTATGCTCGGAGATCGTCGTCAACAAGTCACATCGGAAGCTCATCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA

mRNA sequence

ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTCCCGAACTGCGTTTTCGCGCCGTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAACGTTCACAAGATCTTCGGAGCTAGCAATGTCAGCAAACTACTAAACGAGGTCCAGCCACACCAACGAGAGGACGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCAAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGACGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCTGCCCCATCATCGTCGTCGTCATCGCAGTATGCTCGGAGATCGTCGTCAACAAGTCACATCGGAAGCTCATCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA

Coding sequence (CDS)

ATGTCTTCTTCCACCTACTCCAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGTCTCCCGAACTGCGTTTTCGCGCCGTATTTCCCGTCGGAGGAGCCACAAAAGTTCGCCAACGTTCACAAGATCTTCGGAGCTAGCAATGTCAGCAAACTACTAAACGAGGTCCAGCCACACCAACGAGAGGACGCCGTGAACTCGCTCGCTTACGAGGCCGAGGCAAGGATGAAAGACCCCGTCTACGGCTGCGTCGGCGCCATCTCGATCCTCCAAAGACAAGTCATCAAGCTTCAAAGAGAACTCGACGCTACCAACGCTAACCTCATTCGCTACGCCTGCAGTGAACTCCCTGCCCCATCATCGTCGTCGTCATCGCAGTATGCTCGGAGATCGTCGTCAACAAGTCACATCGGAAGCTCATCGACCTCTAGCTATGGCCATTACTATTCTGGCCTCTACTTTTGTGGCCCTTGTGGAGATGACCATGACAAAGGAGAAGAACACAAGTAA

Protein sequence

MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK

Homology

[Close]

BLAST of CmoCh11G016680 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 197.6 bits (501), Expect = 1.2e-49
Identity = 92/111 (82.88%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  +CVFAPYFP EEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQREL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CmoCh11G016680 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.7e-48
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of CmoCh11G016680 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-38
Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 3   SSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQ 62
           +S+ +NSPCAACKFLRRKC P CVFAPYFP ++PQKFANVHK+FGASNV+KLLNE+ P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 63  REDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPS 122
           REDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    + L +Y    + A +
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAAT 121

Query: 123 SSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCG---------PCGDDHDKG 168
             S        ++      ++T+   HY+   +F           P G+++D G
Sbjct: 122 HQSLGINLLAGAA----DGTATAVRDHYHHHQFFPREQMFGGLDVPAGNNYDGG 171

[Close]

BLAST of CmoCh11G016680 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38
Identity = 75/121 (61.98%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC P+CVFAPYFP + PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L      L +Y  +   A ++S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 127 S 128
           +
Sbjct: 155 T 155

[Close]

BLAST of CmoCh11G016680 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.5e-38
Identity = 75/121 (61.98%), Postives = 97/121 (80.17%), Query Frame = 0


Query: 7   SNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 66
           + SPCAACKFLRRKC P+CVFAPYFP + PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 67  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPAPSSSSS 126
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L      L +Y  +   A ++S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 127 S 128
           +
Sbjct: 155 T 155

[Close]

BLAST of CmoCh11G016680 vs. ExPASy TrEMBL
Match: A0A6J1EL51 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111435322 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.2e-91
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 139 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 189

[Close]

BLAST of CmoCh11G016680 vs. ExPASy TrEMBL
Match: A0A6J1JNR8 (LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111486365 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 166/171 (97.08%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPNCVFA YFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFALYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           P   SSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFC PCGDDHDKGEEHK
Sbjct: 139 P---SSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCDPCGDDHDKGEEHK 186

[Close]

BLAST of CmoCh11G016680 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/175 (90.29%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP+CVFAPYFP EEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQ+ELDATNA+LIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFC-------GPCGDDHDKGE 169
           PS SSSSQYARRSSSTSH GSSSTSSYGHYY+GLYF        GPCGD HDKGE
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGE 175

[Close]

BLAST of CmoCh11G016680 vs. ExPASy TrEMBL
Match: A0A0A0LI15 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/175 (90.29%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP+CVFAPYFP EEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 30  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 89

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQ+ELDATNA+LIRYACSE+PA
Sbjct: 90  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 149

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFC-------GPCGDDHDKGE 169
           PS SSSSQYARRSSSTSH GSSSTSSYGHYY+GLYF        GPCGD HDKGE
Sbjct: 150 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGE 204

[Close]

BLAST of CmoCh11G016680 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/175 (90.29%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP+CVFAPYFP EEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQ+ELDATNA+LIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFC-------GPCGDDHDKGE 169
           PS SSSSQYARRSSSTSH GSSSTSSYGHYY+GLYF        GPCGD HDKGE
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGE 175

[Close]

BLAST of CmoCh11G016680 vs. NCBI nr
Match: XP_022928544.1 (LOB domain-containing protein 25-like [Cucurbita moschata])

HSP 1 Score: 342.8 bits (878), Expect = 1.7e-90
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 139 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 189

[Close]

BLAST of CmoCh11G016680 vs. NCBI nr
Match: KAG7022712.1 (LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 336.7 bits (862), Expect = 1.2e-88
Identity = 169/171 (98.83%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           P SSSSSQYARRSSSTSH+GSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 121 P-SSSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 170

[Close]

BLAST of CmoCh11G016680 vs. NCBI nr
Match: KAG6588944.1 (LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88
Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           P SSSSSQYARRSSSTSH+GSS TSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 121 P-SSSSSQYARRSSSTSHVGSSLTSSYGHYYSGLYFCGPCGDDHDKGEEHK 170

[Close]

BLAST of CmoCh11G016680 vs. NCBI nr
Match: XP_023530211.1 (LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 1.7e-87
Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLP CVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPGCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           P  SSSSQYARRSSSTSH+GSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK
Sbjct: 121 P--SSSSQYARRSSSTSHVGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 169

[Close]

BLAST of CmoCh11G016680 vs. NCBI nr
Match: XP_022989224.1 (LOB domain-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 327.8 bits (839), Expect = 5.6e-86
Identity = 166/171 (97.08%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 60
           MSSSTYSNSPCAACKFLRRKCLPNCVFA YFPSEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 19  MSSSTYSNSPCAACKFLRRKCLPNCVFALYFPSEEPQKFANVHKIFGASNVSKLLNEVQP 78

Query: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 120
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA
Sbjct: 79  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACSELPA 138

Query: 121 PSSSSSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCGPCGDDHDKGEEHK 172
           P   SSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFC PCGDDHDKGEEHK
Sbjct: 139 P---SSSQYARRSSSTSHIGSSSTSSYGHYYSGLYFCDPCGDDHDKGEEHK 186

[Close]

BLAST of CmoCh11G016680 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 197.6 bits (501), Expect = 8.2e-51
Identity = 92/111 (82.88%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 4   STYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPHQR 63
           S Y+NSPCAACKFLRRKC  +CVFAPYFP EEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 64  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYA 115
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQREL+ TNA+L+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of CmoCh11G016680 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of CmoCh11G016680 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of CmoCh11G016680 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

[Close]

BLAST of CmoCh11G016680 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-49
Identity = 92/115 (80.00%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 2   SSSTYSNSPCAACKFLRRKCLPNCVFAPYFPSEEPQKFANVHKIFGASNVSKLLNEVQPH 61
           SSS   NSPCAACKFLRRKC+P C+FAPYFP EEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 62  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQRELDATNANLIRYACS 117
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQ+ELDA NA+L  Y  S
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLS 117

The following BLAST results are available for this feature:

BLAST of CmoCh11G016680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.2e-49	82.88	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	3.7e-48	80.00	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	3.5e-38	50.00	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
A2WXT0	4.5e-38	61.98	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	4.5e-38	61.98	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of CmoCh11G016680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL51	8.2e-91	100.00	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111435...	[more]
A0A6J1JNR8	2.7e-86	97.08	LOB domain-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC11148636...	[more]
A0A5D3BPW0	1.3e-80	90.29	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LI15	1.3e-80	90.29	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV...	[more]
A0A1S3B938	1.3e-80	90.29	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]

BLAST of CmoCh11G016680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928544.1	1.7e-90	100.00	LOB domain-containing protein 25-like [Cucurbita moschata]	[more]
KAG7022712.1	1.2e-88	98.83	LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6588944.1	6.0e-88	98.25	LOB domain-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023530211.1	1.7e-87	97.66	LOB domain-containing protein 25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989224.1	5.6e-86	97.08	LOB domain-containing protein 25-like [Cucurbita maxima]	[more]

BLAST of CmoCh11G016680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	8.2e-51	82.88	LOB domain-containing protein 25	[more]
AT5G63090.2	2.6e-49	80.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	2.6e-49	80.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	2.6e-49	80.00	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	2.6e-49	80.00	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 89..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..144
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 1..138
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 1..138
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 10..106 e-value: 2.3E-42 score: 143.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 9..110 score: 27.691832

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G016680.1	CmoCh11G016680.1	mRNA