CmoCh11G016290 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G016290
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 11605646 .. 11608753 (-)
RNA-Seq ExpressionCmoCh11G016290
SyntenyCmoCh11G016290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCAATAACCCTTGCCATGTTTCTCCAGGTCCTCCTGTTACTTGAAAATCAACAAGTTTCCTCTGTCTTCTGTAGTAATCTTCCAATGGTTTCCTCTGAAAGTCCCAAAACGGATATGATCAGAATTGTATTCCTTGTTAGATCGTTATAGAAATACATCAAAACGGGCTATCGAAGGCTTTTATGATTCACCTTTACTAATCTACGAGAAGACTTTGCCTACTTCAAAGCTAGTTTTGTTAAAATATCATTTTGGTCCTTGTACTTTAAGACTCATAGAATTTTAGTCAGTCTCGTACGTTCAAACTTCTAGTTTTTGTACTTCCTATAAATCCTATAAATCCTATAAATCTCAGAACTTGAGATTAGTCCTCATTGGTAGTTTGAAATTAATTTTGGTTGAAATTGGCAAACTAGCTATTATAATTTCCATACGTAGAAAGAAACAATGTGCATATGTTTCATAAATTTATAAAGGGAAGACTCATAGATACTAATTTGTTTCTGAAAAAGTTAACCATAAGCTGGCAGCAAGGACCAAGGACCAAATTTCAGTATATTCACAAGTATGAAGACTAAATTTACGCATTCGAAAGTACATAAGAACAAAAATAGAAAAGTTTTTGAGTATGTGACTAAAATGGTATTTTAACTAAAGTTTTACGTGGTTCAATTTACCATTTGGAAGCTTAAAACCACGACATTAAATCACCTTGAGCCTTAATAAACACGGACGTTATCATCGACATTCAAAACTCAAATATTGGAAGGCCTACTTAAGAGTTGAATGTTGTTACCTGCTCCATAGAGGCCTTTTCTTTCCAGGAATATTCTGTGGTAGCAGAAAGGCATTTTGGTTCTTTGTCCTGTGGCTGAAGATTTTGACTACTCCCAGAGCTGCATATGCTGCTATATCCATGTAAGCCAGAGAAGTTCCCAGAACCTAGATTCTTTCTAATCAAAGGCTCTTCAGTGGTTTTGAAATTAATGACCAAATCAATATCTGCAATTTGGTCGAGAATCTCCTACAAAGAAGAACCACCCATTGGAAAACGAAAGATTTAGCACCAGTTGGTATTAGTATTCTCTAGTAACAATGTCAGTGAAGAATCACCAAGAAGATTAGAGATTAAAGCTTCGTTGGAAATGAAGAAGAAAAGCCATATTCATCCCAAGGAAGTGAGACTTACAGCTTGATTCCTTGTTCTTGGAATTCCTTCAAGAATGAAGCCTGATTCACCATTGCAATAGCCTTCTTCTAGCCTCTTTGACAACAATCTGAAGATGATTTCTTCCAAAACAGGCTTTCCTTCATTAATTGAACTGGCAATCTGAAATGGAGGAGAGGGAACAGGTTAAATGACACTATCTCATCATACAAACCAACAAGGATCCCCATGATTTCAAAAAATTCATGCTTGTTCAAGCCTGTTCTTCAGTGTAATTCGACATTGTCTATTGCTGGCTACAGTCAAACAAACAAAATAAAATGGGGATCCTTCATTAATTGAACTGGCAATCTGAAATGGAGGAGAGGGAACAGGTTAAATGACACTATCTCATCATACAAACCAACAAGGATCCCCATGATTTCAAAAAATTCATGCTTGTTCAAGCCTGTTCTTCAGTGTAATTCGACATTGTCTATTGCTGGCTACAGTCAAACAAACAAAATAAAATGGGGATCCTTCATTAATTGAACTGGCAATCTGAAATGGAGGAGAGGGAACAGGTTAAATGACCCTATCTCATCGTACAAACCAACAAGGATCCCCATGATTTCAAAAAATTCATGCTTGTTCAAGCCTGTTCTTCAGTGTAATTCGACATTGTCTATTGCTGGCTACAGTCAAACAAACAAAATAAAATGGGGATCCTTCATTAATTGAACTGGCAATCTGAAATGGAGGAGAGGGAACAGGTTAAATGACCCTATCTCATCGTACAAACCAACAAGGATCCCCATGATTTCAAAAAATTCATGCTTGTTCAAGCCTGTTCTTCAGTGTAATTCGACATTGTCTATTGCTGGCTACAGTCAAACAAACAAAATAAAATGACACACACGATGAATCAAATTCAATGCTTAAATTGTGTCACTTTCTTTTATTTATCTATCTATATCCTTCTAATATTTGTTTCTCATGTCGTGCTAAATTAGACCATTCTTGTCCTATAAACATATCATATGATCATTTATTCAAGACAAAATTAAATGCCTCCAGCGTACGGAGCTATTTACAATTGTATTGACAACTTCCCTTTTAATAGATCAAAAGATTACTACTAGGAGGTCTTTTTGTAACAGGTCAAAAGATTGAAGATTACATTTAATTTCCAAACAATAAGAACAGAATTGAAGCTAGATACATCATAGATGAAGGAAATTTCATATGATTTAGCCACAAAAATTAACTAAAATCACGTTTCAAACATCCAAGTGAAAAGGTTAACAAATTCAGAAACTATTCTATAAGTTATACCTCTATATCCTTGAGTTCTAAATTTCAGAAACTAAATACATTCCCCCATAAAATTTCACCTACTAAATTTCCATTCCAAACGCGTAATACAAGACCTCGAGCCATTTCATACAAAATCATACATCAATTTCAAGTTATGCATTACACAGAGTGAAATCAGATATAAGAACAAGAACCTGCTGGTAGATAGAAGACCGAGGATTAAGCTCCTGACGAACAAGGCTCCCCATGGAAATATGAGGAACATCGAGAAGCTTCGAAAGCCTCTCAGCATAAACATGTTTCTTCGCGCCAGGGTCTCCCAAAACCACCCACTGCACTCCTCTTCTCGGCACCCACCCTCGAGAGTCCACCATCGCCCTGCCTTGGCTCCGATCGCCACTTACTCTCTCGAATTCCTCGTCGTCCTCATAGTAATCGTAATCCACCGCCGCCGCAGATCCATACGCTCTTCTCGCGATCGGAGACTTGTGGCAGTGGCGCAGAGACCGCGCCACCGTGCAGAGGTGGCTGAGAACAGACATGGCGGCGGCGGAGCTTTGGGGTTTAAGACGAAAAAAAGGGAAAAAGAGAAGAAGAAAAGAACAAGAAATTCAGTGGTTCCGAAGAAACGAAAATGA

mRNA sequence

ATGCTTCCAATAACCCTTGCCATGTTTCTCCAGGTCCTCCTGTTACTTGAAAATCAACAAGTTTCCTCTGTCTTCTGTAGTAATCTTCCAATGGTTTCCTCTGAAAGTCCCAAAACGGATATGATCAGAATTATTTTGACTACTCCCAGAGCTGCATATGCTGCTATATCCATTGAAGAATCACCAAGAAGATTAGAGATTAAAGCTTCGTTGGAAATGAAGAAGAAAAGCCATATTCATCCCAAGGAAAGTGAAATCAGATATAAGAACAAGAACCTGCTGGTAGATAGAAGACCGAGGATTAAGCTCCTGACGAACAAGGCTCCCCATGGAAATATGAGGAACATCGAGAAGCTTCGAAAGCCTCTCAGCATAAACATGTTTCTTCGCGCCAGGGTCTCCCAAAACCACCCACTGCACTCCTCTTCTCGGCACCCACCCTCGAGAGTCCACCATCGCCCTGCCTTGGCTCCGATCGCCACTTACTCTCTCGAATTCCTCGTCGTCCTCATAGTAATCGTAATCCACCGCCGCCGCAGATCCATACGCTCTTCTCGCGATCGGAGACTTGTGGCAGTGGCGCAGAGACCGCGCCACCGTGCAGAGGTGGCTGAGAACAGACATGGCGGCGGCGGAGCTTTGGGGTTTAAGACGAAAAAAAGGGAAAAAGAGAAGAAGAAAAGAACAAGAAATTCAGTGGTTCCGAAGAAACGAAAATGA

Coding sequence (CDS)

ATGCTTCCAATAACCCTTGCCATGTTTCTCCAGGTCCTCCTGTTACTTGAAAATCAACAAGTTTCCTCTGTCTTCTGTAGTAATCTTCCAATGGTTTCCTCTGAAAGTCCCAAAACGGATATGATCAGAATTATTTTGACTACTCCCAGAGCTGCATATGCTGCTATATCCATTGAAGAATCACCAAGAAGATTAGAGATTAAAGCTTCGTTGGAAATGAAGAAGAAAAGCCATATTCATCCCAAGGAAAGTGAAATCAGATATAAGAACAAGAACCTGCTGGTAGATAGAAGACCGAGGATTAAGCTCCTGACGAACAAGGCTCCCCATGGAAATATGAGGAACATCGAGAAGCTTCGAAAGCCTCTCAGCATAAACATGTTTCTTCGCGCCAGGGTCTCCCAAAACCACCCACTGCACTCCTCTTCTCGGCACCCACCCTCGAGAGTCCACCATCGCCCTGCCTTGGCTCCGATCGCCACTTACTCTCTCGAATTCCTCGTCGTCCTCATAGTAATCGTAATCCACCGCCGCCGCAGATCCATACGCTCTTCTCGCGATCGGAGACTTGTGGCAGTGGCGCAGAGACCGCGCCACCGTGCAGAGGTGGCTGAGAACAGACATGGCGGCGGCGGAGCTTTGGGGTTTAAGACGAAAAAAAGGGAAAAAGAGAAGAAGAAAAGAACAAGAAATTCAGTGGTTCCGAAGAAACGAAAATGA

Protein sequence

MLPITLAMFLQVLLLLENQQVSSVFCSNLPMVSSESPKTDMIRIILTTPRAAYAAISIEESPRRLEIKASLEMKKKSHIHPKESEIRYKNKNLLVDRRPRIKLLTNKAPHGNMRNIEKLRKPLSINMFLRARVSQNHPLHSSSRHPPSRVHHRPALAPIATYSLEFLVVLIVIVIHRRRRSIRSSRDRRLVAVAQRPRHRAEVAENRHGGGGALGFKTKKREKEKKKRTRNSVVPKKRK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G016290.1CmoCh11G016290.1mRNA