CmoCh11G016280 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G016280
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionEF hand calcium-binding protein family
LocationCmo_Chr11: 11603004 .. 11603429 (-)
RNA-Seq ExpressionCmoCh11G016280
SyntenyCmoCh11G016280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAGTTATCGTGTTACAAGAGAGTGTTCGATCATTTTGACACGGATGGAGATGGGAAGATTTCTCCGTTCGAGGTACGGGAGTGTATAGCAGCGATATCAGGGGCGGAGGTGTCGATGGTGGAGGCAGAGGAGGTGGTGGCCGCATTCGACGTGGATGGAGACGGTGGACTTGACGTGGAGGAGTTTGAGAGGTTCGTCGACGACGGAGAGGAGGAGGAGAAGGTGAAAGAGCTTAGAGAAGCTTTTAAAATGTATGAAATGGATGGGTCGGGATTGATTACAGCGGTGAGCTTGAGGAGGACATTGAAGAAATTAGGAGAGTTCGTAAGTTTGGAGGATTGTATGGCCATGATTGCCAAGTTTGACCTTGACAGTGACGGTGTTCTTAGTTTTGATGAATTTAAGGTTATGATGGGATGA

mRNA sequence

ATGGATAAGTTATCGTGTTACAAGAGAGTGTTCGATCATTTTGACACGGATGGAGATGGGAAGATTTCTCCGTTCGAGGTACGGGAGTGTATAGCAGCGATATCAGGGGCGGAGGTGTCGATGGTGGAGGCAGAGGAGGTGGTGGCCGCATTCGACGTGGATGGAGACGGTGGACTTGACGTGGAGGAGTTTGAGAGGTTCGTCGACGACGGAGAGGAGGAGGAGAAGGTGAAAGAGCTTAGAGAAGCTTTTAAAATGTATGAAATGGATGGGTCGGGATTGATTACAGCGGTGAGCTTGAGGAGGACATTGAAGAAATTAGGAGAGTTCGTAAGTTTGGAGGATTGTATGGCCATGATTGCCAAGTTTGACCTTGACAGTGACGGTGTTCTTAGTTTTGATGAATTTAAGGTTATGATGGGATGA

Coding sequence (CDS)

ATGGATAAGTTATCGTGTTACAAGAGAGTGTTCGATCATTTTGACACGGATGGAGATGGGAAGATTTCTCCGTTCGAGGTACGGGAGTGTATAGCAGCGATATCAGGGGCGGAGGTGTCGATGGTGGAGGCAGAGGAGGTGGTGGCCGCATTCGACGTGGATGGAGACGGTGGACTTGACGTGGAGGAGTTTGAGAGGTTCGTCGACGACGGAGAGGAGGAGGAGAAGGTGAAAGAGCTTAGAGAAGCTTTTAAAATGTATGAAATGGATGGGTCGGGATTGATTACAGCGGTGAGCTTGAGGAGGACATTGAAGAAATTAGGAGAGTTCGTAAGTTTGGAGGATTGTATGGCCATGATTGCCAAGTTTGACCTTGACAGTGACGGTGTTCTTAGTTTTGATGAATTTAAGGTTATGATGGGATGA

Protein sequence

MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAKFDLDSDGVLSFDEFKVMMG
Homology
BLAST of CmoCh11G016280 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.8e-31
Identity = 71/137 (51.82%), Postives = 95/137 (69.34%), Query Frame = 0

Query: 7   YKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFER 66
           ++RVF  FD D DGKIS  E+R C+ A  G ++S  EAE +V++ D D DG LD EEF +
Sbjct: 8   FRRVFSAFDRDADGKISAAELRLCMKAALGEDMSAEEAEALVSSADTDDDGLLDEEEFTK 67

Query: 67  F---VDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAKF 126
               ++ G+EEE+ + L EAF+MYEM+G G IT  SL+R L KLG    +E+C  MI +F
Sbjct: 68  LAVQLEMGDEEERCRGLMEAFRMYEMEGEGRITPASLKRMLSKLGSHQGIEECQTMICRF 127

Query: 127 DLDSDGVLSFDEFKVMM 141
           DLD DGV+SF+EFK+MM
Sbjct: 128 DLDGDGVISFEEFKIMM 144

BLAST of CmoCh11G016280 vs. ExPASy Swiss-Prot
Match: Q9FIH9 (Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 9.2e-29
Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 0

Query: 8   KRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERF 67
           + VFD+ D + DGKIS  E++ C++ + GA +S  E EEVV   DVDGDG +D EEF + 
Sbjct: 51  RTVFDYMDANSDGKISGEELQSCVSLLGGA-LSSREVEEVVKTSDVDGDGFIDFEEFLKL 110

Query: 68  V--DDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAKFDL 127
           +  +DG +EE+ KEL+EAF MY M+G   ITA SLRRTL +LGE  +++ C  MI  FD 
Sbjct: 111 MEGEDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQ 170

Query: 128 DSDGVLSFDEFKVMM 141
           + DGVLSFDEF +MM
Sbjct: 171 NDDGVLSFDEFVLMM 184

BLAST of CmoCh11G016280 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 72/143 (50.35%), Postives = 93/143 (65.03%), Query Frame = 0

Query: 7   YKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFER 66
           ++RVF  FD DGDGKIS  E+R C+ A  G ++   E + ++A  D DGDG LD EEF R
Sbjct: 7   FRRVFGSFDQDGDGKISATELRLCVKASLGEDMPDEEVQALMALADTDGDGLLDEEEFVR 66

Query: 67  FVD----DGEEEEKVKE-----LREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCM 126
            V     DG+EEE   +     LREAF MYEM+G G IT +SL+  L KLG  + + +C 
Sbjct: 67  LVTEMEADGDEEEDDDDETCRCLREAFAMYEMEGRGCITPLSLKLMLSKLGTHLDVAECQ 126

Query: 127 AMIAKFDLDSDGVLSFDEFKVMM 141
           AMI +FD++ DGVL+FDEFK MM
Sbjct: 127 AMICRFDMNGDGVLTFDEFKTMM 149

BLAST of CmoCh11G016280 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 73/135 (54.07%), Postives = 90/135 (66.67%), Query Frame = 0

Query: 10  VFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERFVD 69
           +F  FD DGDG+IS  E+R C+    G EVS  EA ++VA+ D DGDG L   EF R V 
Sbjct: 15  LFATFDHDGDGRISAAELRLCMKTTLGEEVSDEEAGQLVASVDADGDGLLCEAEFVRLVQ 74

Query: 70  DGEEEEKVKE----LREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAKFDL 129
             E EE+ +     LREAF MYEM+G G IT  SLRR L++LG    ++DC AMI +FDL
Sbjct: 75  AAEVEEEDERRGTGLREAFGMYEMEGEGCITPTSLRRMLRRLGSDQDIDDCRAMICRFDL 134

Query: 130 DSDGVLSFDEFKVMM 141
           + DGVLSFDEFK+MM
Sbjct: 135 NGDGVLSFDEFKIMM 149

BLAST of CmoCh11G016280 vs. ExPASy Swiss-Prot
Match: Q2QYW1 (Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica OX=39947 GN=CML25 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-24
Identity = 71/139 (51.08%), Postives = 91/139 (65.47%), Query Frame = 0

Query: 10  VFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERFVD 69
           VF  FD DGDGK+S  E+R C+AA  G EVS  EA  ++A  D DGDG LD  EF R   
Sbjct: 8   VFAAFDKDGDGKVSASELRGCMAAALGEEVSEEEAAAILATADTDGDGLLDHHEFMRLSA 67

Query: 70  DGEEEEKVKE----LREAFKMY-EMDGSGLITAVSLRRTLKKLG---EFVSLEDCMAMIA 129
             + +E  +E    LREAF MY E + + +IT  SLRR L++LG   + + +E+C AMI 
Sbjct: 68  AHQLQEPAEESLRCLREAFDMYAEEEETAVITPASLRRMLRRLGSEHQRLEMEECRAMIC 127

Query: 130 KFDLDSDGVLSFDEFKVMM 141
           +FDL+ DGVLSFDEF+VMM
Sbjct: 128 RFDLNGDGVLSFDEFRVMM 146

BLAST of CmoCh11G016280 vs. ExPASy TrEMBL
Match: A0A6J1ENP8 (putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC111435189 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.3e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLDSDGVLSFDEFKVMMG
Sbjct: 121 AKFDLDSDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. ExPASy TrEMBL
Match: A0A6J1JR73 (putative calcium-binding protein CML19 OS=Cucurbita maxima OX=3661 GN=LOC111486733 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.0e-64
Identity = 130/141 (92.20%), Postives = 134/141 (95.04%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFD D DGKISPFEVRECIAA+SG EVSMVEAEEVV AFD+DGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDMDRDGKISPFEVRECIAAVSGEEVSMVEAEEVVGAFDMDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDD  EEEKVKELR+AFKMYEM+GSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDIGEEEKVKELRKAFKMYEMEGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLD DGVLSFDEFKVMMG
Sbjct: 121 AKFDLDGDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. ExPASy TrEMBL
Match: A0A5D3BZX1 (Putative calcium-binding protein CML19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00900 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           M+KL CYKRVF+HFD+DGDGKISP E+RECIA +SG ++S+VEA+E VA FD DGDG L+
Sbjct: 1   MEKLWCYKRVFEHFDSDGDGKISPSELRECIAVVSGEKLSVVEAQEAVAEFDSDGDGQLE 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
            E+F RFVD G +EEKVKELREAFKMYEM+GSGLITA SLRR L+K+GE  SL DCMAMI
Sbjct: 61  EEDFMRFVDGGGKEEKVKELREAFKMYEMEGSGLITAESLRRMLRKMGETRSLRDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMM 141
           AKFD+D DGVL+FDEFKVMM
Sbjct: 121 AKFDVDGDGVLNFDEFKVMM 140

BLAST of CmoCh11G016280 vs. ExPASy TrEMBL
Match: A0A1S3BNF9 (putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103491776 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           M+KL CYKRVF+HFD+DGDGKISP E+RECIA +SG ++S+VEA+E VA FD DGDG L+
Sbjct: 1   MEKLWCYKRVFEHFDSDGDGKISPSELRECIAVVSGEKLSVVEAQEAVAEFDSDGDGQLE 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
            E+F RFVD G +EEKVKELREAFKMYEM+GSGLITA SLRR L+K+GE  SL DCMAMI
Sbjct: 61  EEDFMRFVDGGGKEEKVKELREAFKMYEMEGSGLITAESLRRMLRKMGETRSLRDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMM 141
           AKFD+D DGVL+FDEFKVMM
Sbjct: 121 AKFDVDGDGVLNFDEFKVMM 140

BLAST of CmoCh11G016280 vs. ExPASy TrEMBL
Match: A0A0A0L8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588520 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.1e-48
Identity = 103/140 (73.57%), Postives = 118/140 (84.29%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           M+K  CYKRVF+HFD+DGDGKISP E+RECIA +SG ++S++EA+E VA FD DGDG L 
Sbjct: 1   MEKPRCYKRVFEHFDSDGDGKISPSELRECIAVVSGEKLSVLEAQEAVAEFDSDGDGQLK 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
            E+F RFVD G EEE+VKELREAFKMYEM GSGLITA SLRR L+KLGE  SL DC AMI
Sbjct: 61  EEDFVRFVDGGGEEERVKELREAFKMYEMKGSGLITAESLRRMLRKLGETKSLRDCTAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMM 141
           AKFD+D DGVLSFDEF+VMM
Sbjct: 121 AKFDIDGDGVLSFDEFRVMM 140

BLAST of CmoCh11G016280 vs. NCBI nr
Match: XP_022928328.1 (putative calcium-binding protein CML19 [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 4.7e-70
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLDSDGVLSFDEFKVMMG
Sbjct: 121 AKFDLDSDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. NCBI nr
Match: KAG6588910.1 (putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269.2 bits (687), Expect = 2.0e-68
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFDT+GDGKISPFEVRECIAAISGAEVSMVEAEEVVA FDVDGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDTNGDGKISPFEVRECIAAISGAEVSMVEAEEVVALFDVDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDDGEEEEKVKELREAFKMYEM+GSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMEGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLDSDGVLSFDEFKVMMG
Sbjct: 121 AKFDLDSDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. NCBI nr
Match: KAG7022675.1 (putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 266.5 bits (680), Expect = 1.3e-67
Identity = 137/141 (97.16%), Postives = 138/141 (97.87%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFD DGDGKISP EVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDMDGDGKISPVEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDDGEEEEKVKELREAFKMYEM+GSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMEGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLD DGVLSFDEFKVMMG
Sbjct: 121 AKFDLDGDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. NCBI nr
Match: XP_023530209.1 (putative calcium-binding protein CML19 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.0 bits (650), Expect = 3.8e-64
Identity = 131/141 (92.91%), Postives = 135/141 (95.74%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFD DGDGKISP EVRECIAA+SGAEVS+VEAEEVV AFD+DGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDMDGDGKISPPEVRECIAAVSGAEVSVVEAEEVVVAFDMDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDD  EEEKVKELREAFKMYEM+GSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDRGEEEKVKELREAFKMYEMEGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLD DGVLSFDEFKVMMG
Sbjct: 121 AKFDLDGDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. NCBI nr
Match: XP_022989733.1 (putative calcium-binding protein CML19 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.5e-63
Identity = 130/141 (92.20%), Postives = 134/141 (95.04%), Query Frame = 0

Query: 1   MDKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLD 60
           MDKLSCYKRVFDHFD D DGKISPFEVRECIAA+SG EVSMVEAEEVV AFD+DGDGGLD
Sbjct: 1   MDKLSCYKRVFDHFDMDRDGKISPFEVRECIAAVSGEEVSMVEAEEVVGAFDMDGDGGLD 60

Query: 61  VEEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120
           VEEFERFVDD  EEEKVKELR+AFKMYEM+GSGLITAVSLRRTLKKLGEFVSLEDCMAMI
Sbjct: 61  VEEFERFVDDIGEEEKVKELRKAFKMYEMEGSGLITAVSLRRTLKKLGEFVSLEDCMAMI 120

Query: 121 AKFDLDSDGVLSFDEFKVMMG 142
           AKFDLD DGVLSFDEFKVMMG
Sbjct: 121 AKFDLDGDGVLSFDEFKVMMG 141

BLAST of CmoCh11G016280 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 )

HSP 1 Score: 127.9 bits (320), Expect = 6.6e-30
Identity = 71/135 (52.59%), Postives = 94/135 (69.63%), Query Frame = 0

Query: 8   KRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERF 67
           + VFD+ D + DGKIS  E++ C++ + GA +S  E EEVV   DVDGDG +D EEF + 
Sbjct: 51  RTVFDYMDANSDGKISGEELQSCVSLLGGA-LSSREVEEVVKTSDVDGDGFIDFEEFLKL 110

Query: 68  V--DDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAKFDL 127
           +  +DG +EE+ KEL+EAF MY M+G   ITA SLRRTL +LGE  +++ C  MI  FD 
Sbjct: 111 MEGEDGSDEERRKELKEAFGMYVMEGEEFITAASLRRTLSRLGESCTVDACKVMIRGFDQ 170

Query: 128 DSDGVLSFDEFKVMM 141
           + DGVLSFDEF +MM
Sbjct: 171 NDDGVLSFDEFVLMM 184

BLAST of CmoCh11G016280 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 )

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = 0

Query: 2   DKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDV 61
           DK    + VF + D + DG+ISP E+++    + G ++S  EA   V   D DGDG LD 
Sbjct: 39  DKNRELEAVFSYMDANRDGRISPEELQKSFMTL-GEQLSDEEAVAAVRLSDTDGDGMLDF 98

Query: 62  EEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIA 121
           EEF + +   +EEEK  EL+ AF++Y  +G   IT  SL+  LKKLGE  + +DC  MI+
Sbjct: 99  EEFSQLIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMIS 158

Query: 122 KFDLDSDGVLSFDEFKVMM 141
            FDL++DGVLSFDEF +MM
Sbjct: 159 AFDLNADGVLSFDEFALMM 176

BLAST of CmoCh11G016280 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 )

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 64/139 (46.04%), Postives = 88/139 (63.31%), Query Frame = 0

Query: 2   DKLSCYKRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDV 61
           DK    + VF + D + DG+ISP E+++    + G ++S  EA   V   D DGDG LD 
Sbjct: 39  DKNRELEAVFSYMDANRDGRISPEELQKSFMTL-GEQLSDEEAVAAVRLSDTDGDGMLDF 98

Query: 62  EEFERFVDDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIA 121
           EEF + +   +EEEK  EL+ AF++Y  +G   IT  SL+  LKKLGE  + +DC  MI+
Sbjct: 99  EEFSQLIKVDDEEEKKMELKGAFRLYIAEGEDCITPRSLKMMLKKLGESRTTDDCRVMIS 158

Query: 122 KFDLDSDGVLSFDEFKVMM 141
            FDL++DGVLSFDEF +MM
Sbjct: 159 AFDLNADGVLSFDEFALMM 176

BLAST of CmoCh11G016280 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family )

HSP 1 Score: 107.5 bits (267), Expect = 9.2e-24
Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = 0

Query: 8   KRVFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERF 67
           K+VF  FD +GDGKIS  E++E I A+S    S  E   ++  FD+DG+G +D++EF   
Sbjct: 19  KKVFQRFDKNGDGKISVDELKEVIRALS-PTASPEETVTMMKQFDLDGNGFIDLDEFVAL 78

Query: 68  VD-----DGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAK 127
                   G     V +L+EAF++Y++DG+G I+A  L   +K LGE  S++DC  MI+K
Sbjct: 79  FQIGIGGGGNNRNDVSDLKEAFELYDLDGNGRISAKELHSVMKNLGEKCSVQDCKKMISK 138

Query: 128 FDLDSDGVLSFDEFKVMM 141
            D+D DG ++FDEFK MM
Sbjct: 139 VDIDGDGCVNFDEFKKMM 155

BLAST of CmoCh11G016280 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 104.8 bits (260), Expect = 5.9e-23
Identity = 62/134 (46.27%), Postives = 85/134 (63.43%), Query Frame = 0

Query: 10  VFDHFDTDGDGKISPFEVRECIAAISGAEVSMVEAEEVVAAFDVDGDGGLDVEEFERFV- 69
           VF + D + DG+IS  E+++    + G ++S  EAE  V   D+DGDG LD+ EF   + 
Sbjct: 26  VFAYMDANRDGRISAEELKKSFKTL-GEQMSDEEAEAAVKLSDIDGDGMLDINEFALLIK 85

Query: 70  --DDGEEEEKVKELREAFKMYEMDGSGLITAVSLRRTLKKLGEFVSLEDCMAMIAKFDLD 129
             D+  EEEK +++ EAF+MY  DG   IT  SL+  L KLGE  + +DC  MI  FDL+
Sbjct: 86  GNDEFTEEEKKRKIMEAFRMYIADGEDCITPGSLKMMLMKLGESRTTDDCKVMIQAFDLN 145

Query: 130 SDGVLSFDEFKVMM 141
           +DGVLSFDEF +MM
Sbjct: 146 ADGVLSFDEFALMM 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8RYJ85.8e-3151.82Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q9FIH99.2e-2952.59Calcium-binding protein CML37 OS=Arabidopsis thaliana OX=3702 GN=CML37 PE=1 SV=1[more]
Q8RYJ92.7e-2850.35Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q8RYK02.7e-2854.07Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
Q2QYW11.1e-2451.08Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica OX=399... [more]
Match NameE-valueIdentityDescription
A0A6J1ENP82.3e-70100.00putative calcium-binding protein CML19 OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1JR737.0e-6492.20putative calcium-binding protein CML19 OS=Cucurbita maxima OX=3661 GN=LOC1114867... [more]
A0A5D3BZX12.0e-5075.00Putative calcium-binding protein CML19 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BNF92.0e-5075.00putative calcium-binding protein CML19 OS=Cucumis melo OX=3656 GN=LOC103491776 P... [more]
A0A0A0L8P11.1e-4873.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022928328.14.7e-70100.00putative calcium-binding protein CML19 [Cucurbita moschata][more]
KAG6588910.12.0e-6897.87putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. s... [more]
KAG7022675.11.3e-6797.16putative calcium-binding protein CML19, partial [Cucurbita argyrosperma subsp. a... [more]
XP_023530209.13.8e-6492.91putative calcium-binding protein CML19 [Cucurbita pepo subsp. pepo][more]
XP_022989733.11.5e-6392.20putative calcium-binding protein CML19 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT5G42380.16.6e-3052.59calmodulin like 37 [more]
AT1G76650.11.1e-2446.04calmodulin-like 38 [more]
AT1G76650.31.1e-2446.04calmodulin-like 38 [more]
AT5G37770.19.2e-2443.48EF hand calcium-binding protein family [more]
AT1G76640.15.9e-2346.27Calcium-binding EF-hand family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 115..141
e-value: 1.7
score: 15.9
coord: 6..34
e-value: 2.3E-4
score: 30.5
coord: 79..107
e-value: 0.44
score: 19.6
coord: 43..71
e-value: 3.2
score: 13.7
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 8..68
e-value: 8.4E-11
score: 42.2
IPR002048EF-hand domainPFAMPF13833EF-hand_8coord: 92..140
e-value: 8.5E-10
score: 38.3
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 39..74
score: 11.277538
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 2..37
score: 13.062845
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 75..110
score: 10.831213
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 111..141
score: 13.927603
NoneNo IPR availableGENE3D1.10.238.10coord: 73..141
e-value: 9.9E-20
score: 72.6
NoneNo IPR availableGENE3D1.10.238.10coord: 1..72
e-value: 3.1E-16
score: 61.6
NoneNo IPR availablePANTHERPTHR10891EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEINcoord: 2..140
NoneNo IPR availablePANTHERPTHR10891:SF858EF HAND CALCIUM-BINDING FAMILY PROTEINcoord: 2..140
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 124..136
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 15..27
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 4..140

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G016280.1CmoCh11G016280.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding