CmoCh11G016080 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G016080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	squamosa promoter-binding-like protein 13A
Location	Cmo_Chr11: 11516749 .. 11518271 (+)
RNA-Seq Expression	CmoCh11G016080
Synteny	CmoCh11G016080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTTTATGGATTGGGGTTGGAGAAAATTTTCTGGGGAAAGAGTCACTTTCCAGGAAAACAAACAGAATCCCACAAGTTTTTCTGACTCGATTGGATCAAATAATGAAGAACAGATTCTCAAGGGTTCGAGTCAAGAAAGTTCTACCTCTCATGGATCCTCCAAGAGGACTCGATTGCTTCATGCGAGCCAGAACCAGACATGTTTGGTGGATGGCTGTGACTCTGACTTGAGCAATTGCAAGGAGTATCATCGTCGTCATAGGGTCTGCGATTTGCACTCCAAAACCCCTGTTGTGATGGTCAGAGGCGAGGAGAAACGATTCTGTCAACAGTGCAGCAGGTAAACATTAACAATAACAAGAACAATAACGAGAACAACAACAAGAACAACAAAAAAATGATGGGTTTCGTTTGTTTTGCTGTAATTTTGCCTCAAAATGTATGGTTTCTTGTTTTGGTTTCTTGTGGAGTCTAAAAGTATTGTAGATTTCATTCGCTTGGTGAGTTTGATGAGGTTAAGAGAAGCTGTAGAAAGAGGCTTGATGGACATAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTCATCAGTTCAAGGGATTTTCTGTCAAATTGCAAAGGTATCCCTCCTCAAATCCATAGAAATTTCTTATGATTCTGTTCTTGTTCTGTTTGTAAAATTGGGTTATCCTCCTCAAATCCATAGGTCCAATTGTGCTGCAATTCAGCGATCAACAAGTTCATGTTCCTGATGAACTTGGTAGGAGTTTATGGCCTACGAGAACTGAAGAAAACTCATCTTTGATTCCATCAAATTCCTCTGGTTTCTTCAGTTTTGGAGGAGGAGACAACAAACAGCTGCCATTTTTGCAGCCTAAGAATGGCTCAAAGCAAGGAAAGCATATGGTTTCTTCTCAGTTTTGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGTGAGTGAGGGGGACAGCCAGAAAACGGTGCCTCCGAATAACTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCTCCCAGAGGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTCTTCCAGTCCAAACTCAAGAGGAGACTGAGCTGAATTTCAGTAGTCTAAGTGATTTCTCTGAGTCCTTTGGTTCAAAGGACAAGGCTGTTAGTAAAACCAATGTTCATCATAGTGAGTTGGGGCTTGAAATGGAGGAGGAATCTAATGGCTTGTTTCCCATTTCTTGGGAGTAGTTTAAGCTTTGTCTGTTTGTTTTTTTTTTTTATGGCTTTAATGCAAGACTTCTTTTGAATATGAAGTTCTTTGTTTCTGTGATTGTAGACAGCAAAGGGGTCTATTTTGCTGGTTGTTTTGTGACCTTTGACATAAAAAGGAATAGACTACTACTTTGACATCGTCATTTAGACTACGAGCCACTCCACGTTAAAGATATCTACGTGCCATTTTGTGACATGTACGTGGAGCGGAGCGATCCTGG

mRNA sequence

TGTTTATGGATTGGGGTTGGAGAAAATTTTCTGGGGAAAGAGTCACTTTCCAGGAAAACAAACAGAATCCCACAAGTTTTTCTGACTCGATTGGATCAAATAATGAAGAACAGATTCTCAAGGGTTCGAGTCAAGAAAGTTCTACCTCTCATGGATCCTCCAAGAGGACTCGATTGCTTCATGCGAGCCAGAACCAGACATGTTTGGTGGATGGCTGTGACTCTGACTTGAGCAATTGCAAGGAGTATCATCGTCGTCATAGGGTCTGCGATTTGCACTCCAAAACCCCTGTTGTGATGGTCAGAGGCGAGGAGAAACGATTCTGTCAACAGTGCAGCAGATTTCATTCGCTTGGTGAGTTTGATGAGGTTAAGAGAAGCTGTAGAAAGAGGCTTGATGGACATAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTCATCAGTTCAAGGGATTTTCTGTCAAATTGCAAAGGTCCAATTGTGCTGCAATTCAGCGATCAACAAGTTCATGTTCCTGATGAACTTGGTAGGAGTTTATGGCCTACGAGAACTGAAGAAAACTCATCTTTGATTCCATCAAATTCCTCTGGTTTCTTCAGTTTTGGAGGAGGAGACAACAAACAGCTGCCATTTTTGCAGCCTAAGAATGGCTCAAAGCAAGGAAAGCATATGGTTTCTTCTCAGTTTTGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGTGAGTGAGGGGGACAGCCAGAAAACGGTGCCTCCGAATAACTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCTCCCAGAGGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTCTTCCAGTCCAAACTCAAGAGGAGACTGAGCTGAATTTCAGTAGTCTAAGTGATTTCTCTGAGTCCTTTGGTTCAAAGGACAAGGCTGTTAGTAAAACCAATGTTCATCATAGTGAGTTGGGGCTTGAAATGGAGGAGGAATCTAATGGCTTGTTTCCCATTTCTTGGGAGTAGTTTAAGCTTTGTCTGTTTGTTTTTTTTTTTTATGGCTTTAATGCAAGACTTCTTTTGAATATGAAGTTCTTTGTTTCTGTGATTGTAGACAGCAAAGGGGTCTATTTTGCTGGTTGTTTTGTGACCTTTGACATAAAAAGGAATAGACTACTACTTTGACATCGTCATTTAGACTACGAGCCACTCCACGTTAAAGATATCTACGTGCCATTTTGTGACATGTACGTGGAGCGGAGCGATCCTGG

Coding sequence (CDS)

ATGGATTGGGGTTGGAGAAAATTTTCTGGGGAAAGAGTCACTTTCCAGGAAAACAAACAGAATCCCACAAGTTTTTCTGACTCGATTGGATCAAATAATGAAGAACAGATTCTCAAGGGTTCGAGTCAAGAAAGTTCTACCTCTCATGGATCCTCCAAGAGGACTCGATTGCTTCATGCGAGCCAGAACCAGACATGTTTGGTGGATGGCTGTGACTCTGACTTGAGCAATTGCAAGGAGTATCATCGTCGTCATAGGGTCTGCGATTTGCACTCCAAAACCCCTGTTGTGATGGTCAGAGGCGAGGAGAAACGATTCTGTCAACAGTGCAGCAGATTTCATTCGCTTGGTGAGTTTGATGAGGTTAAGAGAAGCTGTAGAAAGAGGCTTGATGGACATAATCGGCGTAGGAGGAAGCCTCAGCCTGAATCCTTGTTCATCAGTTCAAGGGATTTTCTGTCAAATTGCAAAGGTCCAATTGTGCTGCAATTCAGCGATCAACAAGTTCATGTTCCTGATGAACTTGGTAGGAGTTTATGGCCTACGAGAACTGAAGAAAACTCATCTTTGATTCCATCAAATTCCTCTGGTTTCTTCAGTTTTGGAGGAGGAGACAACAAACAGCTGCCATTTTTGCAGCCTAAGAATGGCTCAAAGCAAGGAAAGCATATGGTTTCTTCTCAGTTTTGTTTCAATCAGCAACTTCCTGATGCAATCTCTCAGGTGAGTGAGGGGGACAGCCAGAAAACGGTGCCTCCGAATAACTCGCCCGAGGATTCGGGTTGTGCTCTCTATCTTCTGTCATCGCACCCTGTGCAAGCTCTCCCAGAGGCTGGCTTGAGCTCTTTGGTTCAGTCCCATCTGAGTCTTCCAGTCCAAACTCAAGAGGAGACTGAGCTGAATTTCAGTAGTCTAAGTGATTTCTCTGAGTCCTTTGGTTCAAAGGACAAGGCTGTTAGTAAAACCAATGTTCATCATAGTGAGTTGGGGCTTGAAATGGAGGAGGAATCTAATGGCTTGTTTCCCATTTCTTGGGAGTAG

Protein sequence

MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE

Homology

[Close]

BLAST of CmoCh11G016080 vs. ExPASy Swiss-Prot
Match: B9DI20 (Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SPL13A PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.6e-37
Identity = 119/318 (37.42%), Postives = 161/318 (50.63%), Query Frame = 0


Query: 26  SDSIGSNNEEQILKGSSQESS------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSN 85
           S S+  + E+ I     ++S+      +   SSKRTR      NQ   CLVDGCDSD SN
Sbjct: 53  SSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSN 112

Query: 86  CKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRR 145
           C+EYH+RH+VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRR
Sbjct: 113 CREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRR 172

Query: 146 RKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPTRTEENSS-------- 205
           RKPQPE +     +F +  +G  +L+FS          G  ++PT +  N S        
Sbjct: 173 RKPQPEHIG-RPANFFTGFQGSKLLEFSG---------GSHVFPTTSVLNPSWGNSLVSV 232

Query: 206 LIPSNSSGFFS----FGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEG 265
            + +N S +        G    +   + P + S      ++ QF F Q+      + S  
Sbjct: 233 AVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSR 292

Query: 266 DSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSL 324
            +       +   DS CAL LLSS        + +  L+Q  LSL   +QE  E  F   
Sbjct: 293 TASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGS 345

[Close]

BLAST of CmoCh11G016080 vs. ExPASy Swiss-Prot
Match: P0DI11 (Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SPL13B PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 4.6e-37
Identity = 119/318 (37.42%), Postives = 161/318 (50.63%), Query Frame = 0


Query: 26  SDSIGSNNEEQILKGSSQESS------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSN 85
           S S+  + E+ I     ++S+      +   SSKRTR      NQ   CLVDGCDSD SN
Sbjct: 53  SSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSN 112

Query: 86  CKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRR 145
           C+EYH+RH+VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRR
Sbjct: 113 CREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRR 172

Query: 146 RKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPTRTEENSS-------- 205
           RKPQPE +     +F +  +G  +L+FS          G  ++PT +  N S        
Sbjct: 173 RKPQPEHIG-RPANFFTGFQGSKLLEFSG---------GSHVFPTTSVLNPSWGNSLVSV 232

Query: 206 LIPSNSSGFFS----FGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEG 265
            + +N S +        G    +   + P + S      ++ QF F Q+      + S  
Sbjct: 233 AVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSR 292

Query: 266 DSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSL 324
            +       +   DS CAL LLSS        + +  L+Q  LSL   +QE  E  F   
Sbjct: 293 TASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGS 345

[Close]

BLAST of CmoCh11G016080 vs. ExPASy Swiss-Prot
Match: Q2R3Y1 (Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL19 PE=3 SV=2)

HSP 1 Score: 147.5 bits (371), Expect = 2.8e-34
Identity = 99/224 (44.20%), Postives = 130/224 (58.04%), Query Frame = 0


Query: 64  QTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVK 123
           + C VDGC SDLS C++YHRRH+VC+ H+KTPVV+V G+E+RFCQQCSRFH+L EFD+ K
Sbjct: 91  EACSVDGCRSDLSRCRDYHRRHKVCEAHAKTPVVVVAGQEQRFCQQCSRFHNLAEFDDGK 150

Query: 124 RSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFS--DQQVHVPDELGRSLWP 183
           +SCRKRLDGHNRRRRKPQ ++L  + R FL   +     QFS   Q   + D+   +L  
Sbjct: 151 KSCRKRLDGHNRRRRKPQHDAL--NPRSFLPYHQAN---QFSVYPQTFPIADQNADAL-- 210

Query: 184 TRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQP-KNGSKQGKHMVSSQFCFNQQLPDAIS 243
            R  +       + SG F     + KQ PF+Q   +G    +H +   F   +   D  +
Sbjct: 211 MRPLDRHPPFSISFSGTFR----EPKQFPFMQDGGSGLGAARHDLLRPFSSPE---DGAN 270

Query: 244 QVSEGDSQKTVPPNNSPEDSGCALYLLSS--HPVQALPEAGLSS 283
             +   +   VP    PE   CAL LLSS  HP    P AG+SS
Sbjct: 271 ITTTRSACNGVPHGLDPE---CALSLLSSSLHP---SPAAGISS 294

[Close]

BLAST of CmoCh11G016080 vs. ExPASy Swiss-Prot
Match: Q0J0K1 (Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL18 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.2e-32
Identity = 67/104 (64.42%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 62  QNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDE 121
           Q  +C VDGC +DLS  ++YHRRH+VC+ HSKTPVV+V G E RFCQQCSRFH LGEFDE
Sbjct: 111 QCPSCAVDGCKADLSKHRDYHRRHKVCEPHSKTPVVVVSGREMRFCQQCSRFHLLGEFDE 170

Query: 122 VKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFS 166
            KRSCRKRLDGHNRRRRKPQ +S+  SS  F+++ +G     F+
Sbjct: 171 AKRSCRKRLDGHNRRRRKPQADSM--SSGSFMTSQQGTRFASFT 212

[Close]

BLAST of CmoCh11G016080 vs. ExPASy Swiss-Prot
Match: Q6YZE8 (Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL16 PE=2 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.0e-32
Identity = 82/180 (45.56%), Postives = 107/180 (59.44%), Query Frame = 0


Query: 45  SSTSHGSSKRTRLLHASQNQ---TCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRG 104
           ++ S   +KR R   A+  Q   +C VDGC  DLS C++YHRRH+VC+ HSKTP+V+V G
Sbjct: 94  AAASSAPAKRPRGAAAAGQQQCPSCAVDGCKEDLSKCRDYHRRHKVCEAHSKTPLVVVSG 153

Query: 105 EEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIV 164
            E RFCQQCSRFH L EFDE KRSCRKRLDGHNRRRRKPQP+ +  +S  +L++ +G   
Sbjct: 154 REMRFCQQCSRFHLLQEFDEAKRSCRKRLDGHNRRRRKPQPDPM--NSASYLASQQG--- 213

Query: 165 LQFSDQQVHVPDELGRSLWPTRTEENSSL--------IPSNSSGFFSFGGGDNKQLPFLQ 214
            +FS      P+     +   +TEE+           I S    F        ++ PFLQ
Sbjct: 214 ARFSPFATPRPEASWTGM--IKTEESPYYTHHQIPLGISSRQQHFVGSTSDGGRRFPFLQ 266

[Close]

BLAST of CmoCh11G016080 vs. ExPASy TrEMBL
Match: A0A6J1EL17 (squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC111435296 PE=4 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 5.9e-197
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHA 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHA
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHA 60

Query: 61  SQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFD 120
           SQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFD
Sbjct: 61  SQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFD 120

Query: 121 EVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLW 180
           EVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLW
Sbjct: 121 EVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLW 180

Query: 181 PTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAIS 240
           PTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAIS
Sbjct: 181 PTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAIS 240

Query: 241 QVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETEL 300
           QVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETEL
Sbjct: 241 QVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETEL 300

Query: 301 NFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           NFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 NFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 346

[Close]

BLAST of CmoCh11G016080 vs. ExPASy TrEMBL
Match: A0A6J1JR21 (squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111486693 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.5e-192
Identity = 340/347 (97.98%), Postives = 342/347 (98.56%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN-EEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRK SGERVTFQENKQNPTSFSDSIGSNN EEQILKGSSQES TSHGSSKRTRLLH
Sbjct: 1   MDWGWRKISGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESYTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WP RTEENSSL+PSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPD I
Sbjct: 181 WPMRTEENSSLVPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDTI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSP+DSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPDDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of CmoCh11G016080 vs. ExPASy TrEMBL
Match: A0A1S3BNK6 (squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC103491800 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.6e-140
Identity = 274/358 (76.54%), Postives = 297/358 (82.96%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQN-PTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDW W KFSGE   F ENKQN P+SFSDSIGSN      KGSSQESS+SHGSSKRTRLLH
Sbjct: 1   MDWVWGKFSGE-PNFPENKQNPPSSFSDSIGSN------KGSSQESSSSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
            +QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  GNQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQV-HVPDELGRS 180
           DEVKRSCRKRLDGHNRRRRKPQPESLF+SSRDFLSNCKGPIVLQFSDQQ+ HV DE+GRS
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRS 180

Query: 181 LWPTRT--EENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLP 240
           LWP RT  E+ SS++PSNSS +FS+G GDNK+LPF   KNG +Q K MVSSQ  FNQQLP
Sbjct: 181 LWPVRTEGEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLP 240

Query: 241 DAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQE 300
           D ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT  
Sbjct: 241 DVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQT-H 300

Query: 301 ETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGL--------FPISWE 347
           ETEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GL        FPISWE
Sbjct: 301 ETELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of CmoCh11G016080 vs. ExPASy TrEMBL
Match: A0A0A0L895 (SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.5e-139
Identity = 272/358 (75.98%), Postives = 298/358 (83.24%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTS-FSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGW KFSGE + F ENKQNP S FSDSIGSN      KGSSQESS+SHGSSKRTRLLH
Sbjct: 1   MDWGWGKFSGEPI-FPENKQNPPSTFSDSIGSN------KGSSQESSSSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           A+QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ANQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQV-HVPDELGRS 180
           DEVKRSCRKRLDGHNRRRRKPQPESLF+SS DFLSNCKGPIVLQFSDQQ+ HV +E+GRS
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFMSSSDFLSNCKGPIVLQFSDQQIHHVSEEIGRS 180

Query: 181 LWPTRT--EENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLP 240
           LWP RT  E+ SS++PSNSS +FS+G GDNK+LPF   KNG +Q K +VSSQ  FNQQLP
Sbjct: 181 LWPVRTEGEKKSSMVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQIVSSQLSFNQQLP 240

Query: 241 DAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQE 300
           + ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT  
Sbjct: 241 NVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQT-H 300

Query: 301 ETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGL--------FPISWE 347
           ETEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GL        FPISWE
Sbjct: 301 ETELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQSEAPHKFPISWE 344

[Close]

BLAST of CmoCh11G016080 vs. ExPASy TrEMBL
Match: A0A5D3C4M7 (Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001560 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.3e-139
Identity = 273/358 (76.26%), Postives = 296/358 (82.68%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQN-PTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLH 60
           MDW W KFSGE   F ENKQN P+SFSDSIGSN      K SSQESS+SHGSSKRTRLLH
Sbjct: 1   MDWVWGKFSGE-PNFPENKQNPPSSFSDSIGSN------KDSSQESSSSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
            +QNQTCLVDGCD+DL+NCK+YHRRHRVCD HSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  GNQNQTCLVDGCDTDLTNCKDYHRRHRVCDSHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQV-HVPDELGRS 180
           DEVKRSCRKRLDGHNRRRRKPQPESLF+SSRDFLSNCKGPIVLQFSDQQ+ HV DE+GRS
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFMSSRDFLSNCKGPIVLQFSDQQIHHVSDEIGRS 180

Query: 181 LWPTRT--EENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLP 240
           LWP RT  E+ SS++PSNSS +FS+G GDNK+LPF   KNG +Q K MVSSQ  FNQQLP
Sbjct: 181 LWPVRTEGEKKSSVVPSNSSAYFSYGRGDNKELPFFLHKNGKRQSKQMVSSQLSFNQQLP 240

Query: 241 DAISQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQE 300
           D ISQ SE D+QK V  + SPEDSGCALYLLSS  VQA  +AGLSSLVQSHLS+PVQT  
Sbjct: 241 DVISQGSEVDNQKPVTTDTSPEDSGCALYLLSSRTVQAHSDAGLSSLVQSHLSVPVQT-H 300

Query: 301 ETELNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGL--------FPISWE 347
           ETEL+FSSLSDFS SF SKDK VS      S+LGLEMEEES+GL        FPISWE
Sbjct: 301 ETELHFSSLSDFSGSFDSKDKPVS------SQLGLEMEEESDGLFQNEAPHKFPISWE 344

[Close]

BLAST of CmoCh11G016080 vs. NCBI nr
Match: XP_022928509.1 (squamosa promoter-binding-like protein 13A [Cucurbita moschata])

HSP 1 Score: 696.4 bits (1796), Expect = 1.2e-196
Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHA 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHA
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHA 60

Query: 61  SQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFD 120
           SQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFD
Sbjct: 61  SQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFD 120

Query: 121 EVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLW 180
           EVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLW
Sbjct: 121 EVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLW 180

Query: 181 PTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAIS 240
           PTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAIS
Sbjct: 181 PTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAIS 240

Query: 241 QVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETEL 300
           QVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETEL
Sbjct: 241 QVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETEL 300

Query: 301 NFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           NFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 NFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 346

[Close]

BLAST of CmoCh11G016080 vs. NCBI nr
Match: KAG7022658.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 687.6 bits (1773), Expect = 5.7e-194
Identity = 344/347 (99.14%), Postives = 344/347 (99.14%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN-EEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN EEQILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WP R EENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI
Sbjct: 181 WPMRNEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of CmoCh11G016080 vs. NCBI nr
Match: XP_023531790.1 (squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_023531791.1 squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 686.8 bits (1771), Expect = 9.6e-194
Identity = 342/347 (98.56%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEQ-ILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEE+ ILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEPILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMV+GEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVKGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WP RTEENSSL+PSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI
Sbjct: 181 WPMRTEENSSLVPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of CmoCh11G016080 vs. NCBI nr
Match: XP_022989683.1 (squamosa promoter-binding-like protein 13A [Cucurbita maxima])

HSP 1 Score: 681.8 bits (1758), Expect = 3.1e-192
Identity = 340/347 (97.98%), Postives = 342/347 (98.56%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN-EEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRK SGERVTFQENKQNPTSFSDSIGSNN EEQILKGSSQES TSHGSSKRTRLLH
Sbjct: 1   MDWGWRKISGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESYTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180

Query: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
           WP RTEENSSL+PSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPD I
Sbjct: 181 WPMRTEENSSLVPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDTI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSP+DSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPDDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347

[Close]

BLAST of CmoCh11G016080 vs. NCBI nr
Match: KAG6588893.1 (Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 535.0 bits (1377), Expect = 4.7e-148
Identity = 283/347 (81.56%), Postives = 283/347 (81.56%), Query Frame = 0


Query: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN-EEQILKGSSQESSTSHGSSKRTRLLH 60
           MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNN EEQILKGSSQESSTSHGSSKRTRLLH
Sbjct: 1   MDWGWRKFSGERVTFQENKQNPTSFSDSIGSNNEEEQILKGSSQESSTSHGSSKRTRLLH 60

Query: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120
           ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF
Sbjct: 61  ASQNQTCLVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEF 120

Query: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSL 180
           DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCK                      
Sbjct: 121 DEVKRSCRKRLDGHNRRRRKPQPESLFISSRDFLSNCK---------------------- 180

Query: 181 WPTRTEENSSLIPSNSSGFFSFGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAI 240
                                                    GKHMVSSQFCFNQQLPDAI
Sbjct: 181 -----------------------------------------GKHMVSSQFCFNQQLPDAI 240

Query: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 300
           SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE
Sbjct: 241 SQVSEGDSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETE 284

Query: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 347
           LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE
Sbjct: 301 LNFSSLSDFSESFGSKDKAVSKTNVHHSELGLEMEEESNGLFPISWE 284

[Close]

BLAST of CmoCh11G016080 vs. TAIR 10
Match: AT5G50570.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-38
Identity = 119/318 (37.42%), Postives = 161/318 (50.63%), Query Frame = 0


Query: 26  SDSIGSNNEEQILKGSSQESS------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSN 85
           S S+  + E+ I     ++S+      +   SSKRTR      NQ   CLVDGCDSD SN
Sbjct: 53  SSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSN 112

Query: 86  CKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRR 145
           C+EYH+RH+VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRR
Sbjct: 113 CREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRR 172

Query: 146 RKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPTRTEENSS-------- 205
           RKPQPE +     +F +  +G  +L+FS          G  ++PT +  N S        
Sbjct: 173 RKPQPEHIG-RPANFFTGFQGSKLLEFSG---------GSHVFPTTSVLNPSWGNSLVSV 232

Query: 206 LIPSNSSGFFS----FGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEG 265
            + +N S +        G    +   + P + S      ++ QF F Q+      + S  
Sbjct: 233 AVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSR 292

Query: 266 DSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSL 324
            +       +   DS CAL LLSS        + +  L+Q  LSL   +QE  E  F   
Sbjct: 293 TASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGS 345

[Close]

BLAST of CmoCh11G016080 vs. TAIR 10
Match: AT5G50670.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-38
Identity = 119/318 (37.42%), Postives = 161/318 (50.63%), Query Frame = 0


Query: 26  SDSIGSNNEEQILKGSSQESS------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSN 85
           S S+  + E+ I     ++S+      +   SSKRTR      NQ   CLVDGCDSD SN
Sbjct: 53  SSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSN 112

Query: 86  CKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRR 145
           C+EYH+RH+VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRR
Sbjct: 113 CREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRR 172

Query: 146 RKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPTRTEENSS-------- 205
           RKPQPE +     +F +  +G  +L+FS          G  ++PT +  N S        
Sbjct: 173 RKPQPEHIG-RPANFFTGFQGSKLLEFSG---------GSHVFPTTSVLNPSWGNSLVSV 232

Query: 206 LIPSNSSGFFS----FGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEG 265
            + +N S +        G    +   + P + S      ++ QF F Q+      + S  
Sbjct: 233 AVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSR 292

Query: 266 DSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSL 324
            +       +   DS CAL LLSS        + +  L+Q  LSL   +QE  E  F   
Sbjct: 293 TASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGS 345

[Close]

BLAST of CmoCh11G016080 vs. TAIR 10
Match: AT5G50570.2 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 156.8 bits (395), Expect = 3.2e-38
Identity = 119/318 (37.42%), Postives = 161/318 (50.63%), Query Frame = 0


Query: 26  SDSIGSNNEEQILKGSSQESS------TSHGSSKRTRLLHASQNQ--TCLVDGCDSDLSN 85
           S S+  + E+ I     ++S+      +   SSKRTR      NQ   CLVDGCDSD SN
Sbjct: 53  SSSVFGDTEQVISLSKWKDSALAKPEGSRSSSSKRTRGNGVGTNQMPICLVDGCDSDFSN 112

Query: 86  CKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRR 145
           C+EYH+RH+VCD+HSKTPVV + G ++RFCQQCSRFH+L EFDE KRSCRKRLDGHNRRR
Sbjct: 113 CREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSRFHALEEFDEGKRSCRKRLDGHNRRR 172

Query: 146 RKPQPESLFISSRDFLSNCKGPIVLQFSDQQVHVPDELGRSLWPTRTEENSS-------- 205
           RKPQPE +     +F +  +G  +L+FS          G  ++PT +  N S        
Sbjct: 173 RKPQPEHIG-RPANFFTGFQGSKLLEFSG---------GSHVFPTTSVLNPSWGNSLVSV 232

Query: 206 LIPSNSSGFFS----FGGGDNKQLPFLQPKNGSKQGKHMVSSQFCFNQQLPDAISQVSEG 265
            + +N S +        G    +   + P + S      ++ QF F Q+      + S  
Sbjct: 233 AVAANGSSYGQSQSYVVGSSPAKTGIMFPISSSPNSTRSIAKQFPFLQE------EESSR 292

Query: 266 DSQKTVPPNNSPEDSGCALYLLSSHPVQALPEAGLSSLVQSHLSLPVQTQEETELNFSSL 324
            +       +   DS CAL LLSS        + +  L+Q  LSL   +QE  E  F   
Sbjct: 293 TASLCERMTSCIHDSDCALSLLSS------SSSSVPHLLQPPLSL---SQEAVETVFYGS 345

[Close]

BLAST of CmoCh11G016080 vs. TAIR 10
Match: AT1G69170.1 (Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein )

HSP 1 Score: 119.8 bits (299), Expect = 4.4e-27
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 0


Query: 7   KFSGERVTFQENKQNPTSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHASQNQTC 66
           KFS + +   + K    SF D +G+++++   +G +  S  S  S+        SQN  C
Sbjct: 74  KFSSQELNRIDFKLR--SFLD-LGNDDDDTSSRGFALPSKKSRASNL------CSQNPLC 133

Query: 67  LVDGCDSDLSNCKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSC 126
            V GC  DLS+ K+YH+RHRVC+ HSKT VV+V G E+RFCQQCSRFH L EFD+ KRSC
Sbjct: 134 QVYGCSKDLSSSKDYHKRHRVCEAHSKTSVVIVNGLEQRFCQQCSRFHFLSEFDDGKRSC 193

Query: 127 RKRLDGHNRRRRKP 141
           R+RL GHN RRRKP
Sbjct: 194 RRRLAGHNERRRKP 198

[Close]

BLAST of CmoCh11G016080 vs. TAIR 10
Match: AT2G42200.1 (squamosa promoter binding protein-like 9 )

HSP 1 Score: 119.4 bits (298), Expect = 5.7e-27
Identity = 65/130 (50.00%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 23  TSFSDSIGSNNEEQILKGSSQESSTSHGSSKRTRLLHASQNQT-----CLVDGCDSDLSN 82
           +SFS  +    +     G     S+S G     R+      Q+     C V+GC  DL+N
Sbjct: 26  SSFSGGLMFGQKIYFEDGGGGSGSSSSGGRSNRRVRGGGSGQSGQIPRCQVEGCGMDLTN 85

Query: 83  CKEYHRRHRVCDLHSKTPVVMVRGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRR 142
            K Y+ RHRVC +HSKTP V V G E+RFCQQCSRFH L EFD  KRSCR+RL GHN RR
Sbjct: 86  AKGYYSRHRVCGVHSKTPKVTVAGIEQRFCQQCSRFHQLPEFDLEKRSCRRRLAGHNERR 145

Query: 143 RKPQPESLFI 148
           RKPQP SL +
Sbjct: 146 RKPQPASLSV 155

The following BLAST results are available for this feature:

BLAST of CmoCh11G016080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9DI20	4.6e-37	37.42	Squamosa promoter-binding-like protein 13A OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
P0DI11	4.6e-37	37.42	Squamosa promoter-binding-like protein 13B OS=Arabidopsis thaliana OX=3702 GN=SP...	[more]
Q2R3Y1	2.8e-34	44.20	Putative squamosa promoter-binding-like protein 19 OS=Oryza sativa subsp. japoni...	[more]
Q0J0K1	1.2e-32	64.42	Squamosa promoter-binding-like protein 18 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q6YZE8	2.0e-32	45.56	Squamosa promoter-binding-like protein 16 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CmoCh11G016080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL17	5.9e-197	100.00	squamosa promoter-binding-like protein 13A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JR21	1.5e-192	97.98	squamosa promoter-binding-like protein 13A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3BNK6	6.6e-140	76.54	squamosa promoter-binding-like protein 13A OS=Cucumis melo OX=3656 GN=LOC1034918...	[more]
A0A0A0L895	2.5e-139	75.98	SBP-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G567830 PE...	[more]
A0A5D3C4M7	4.3e-139	76.26	Squamosa promoter-binding-like protein 13A OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CmoCh11G016080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928509.1	1.2e-196	100.00	squamosa promoter-binding-like protein 13A [Cucurbita moschata]	[more]
KAG7022658.1	5.7e-194	99.14	Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subs...	[more]
XP_023531790.1	9.6e-194	98.56	squamosa promoter-binding-like protein 13A [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_022989683.1	3.1e-192	97.98	squamosa promoter-binding-like protein 13A [Cucurbita maxima]	[more]
KAG6588893.1	4.7e-148	81.56	Squamosa promoter-binding-like protein 13B, partial [Cucurbita argyrosperma subs...	[more]

BLAST of CmoCh11G016080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G50570.1	3.2e-38	37.42	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50670.1	3.2e-38	37.42	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT5G50570.2	3.2e-38	37.42	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT1G69170.1	4.4e-27	50.75	Squamosa promoter-binding protein-like (SBP domain) transcription factor family ...	[more]
AT2G42200.1	5.7e-27	50.00	squamosa promoter binding protein-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004333	SBP domain	PFAM	PF03110	SBP	coord: 66..139 e-value: 3.1E-30 score: 104.3
IPR004333	SBP domain	PROSITE	PS51141	ZF_SBP	coord: 63..140 score: 31.547325
IPR036893	SBP domain superfamily	GENE3D	4.10.1100.10		coord: 58..127 e-value: 1.9E-31 score: 110.0
IPR036893	SBP domain superfamily	SUPERFAMILY	103612	SBT domain	coord: 65..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..56
None	No IPR available	PANTHER	PTHR31251:SF93	TRANSCRIPTION FACTOR SBP FAMILY-RELATED	coord: 39..322
IPR044817	Squamosa promoter-binding-like protein	PANTHER	PTHR31251	SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4	coord: 39..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G016080.1	CmoCh11G016080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding