CmoCh11G016040 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G016040
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
LocationCmo_Chr11: 11484005 .. 11488526 (+)
RNA-Seq ExpressionCmoCh11G016040
SyntenyCmoCh11G016040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCACCTTCTTTGGGTTAAGTAACTTAATTTAGACACTAATCTGGATTTTCATTGGCCTATTAAACAAATTCTTTATTAGTTCTATAGTTTAAGAGAGAGAGAGATTGGAAGGGTGTTGTTTGGCACATGGGTTTTGCTGAAAGACGAGAATAATGCGAAGAGCGGCGTTAGTATTTGACTCCAATATTTTCCGGGAAAAAGAAAAATTTCCCGGGAAAATTTCCCAGAATCTTCTCTGATCAGCGAAGAACGATGTAGGGTTTGCTTCGAATTTTCCCTTCATTCAATGTAAGTTCACTTCCTTCGACATTGAGGAACTTTGATTTACAAGTTTTTGTGGGGATTTCTACACGAAGGGGCCATTGTCAAGTATTCAAACAGTACTAGTTCATACAGAATCTGGCTGTAAAGAGTGTTGATGTTTAATAAGAGTAGAATAATTTGCTTGAACAGTTACCTGACTAGAAATTTTTGCTTGAAGTTATAGAAAAATGAGATGAGGAGTCGATTTACTTAGTGTTTTGATGAAAGCATTAGTACTGAAGTGTTTTATTTGCCCCATTTCCTGTTGAAGTTATGGAGAAGTATATGATTGTTTGGCTTTACAGAGTTCATAATTTTCATGTTCTTGGCCTTTCTTTGTTTGGTATTTCGTTACAAACAATTTATTTCTCTGTTTTTTCGAGCTGAGTTTGTTCATGTTATAATGAAACTCAAGTGGAATTACACCCAATAGCTTTTCTTTTGTTCAGCTGTTTGTCTTCCACTCCAACATAGCTACAAACTTCAAAGGGACTGTCAATGGATGGGATTGAGGTTCAATCCAGAAACATCCACTTCCAATGGATATGGTCCATCAGCTCTCGTTTCTGTCCATCTAGGCAGCATCCAAGTAGAGATAGGAGTAGCAAACAGTCGAGGAGGAGCACGCCGCCATTAAACATGGAACTTGGTTTGGCATCAGTATTGTGAGATCCCGCATCAGTTGGGGAGGAGAACAAAGCATTCTTTATAAGCGTGTGGAAACCTCTCCCTAGTAGACACATTTTAAAAACCTTGAGGGAAAGCTTGAAAGAGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATTAGAGCCAAACACCAAGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGAGGAGAACGAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAACTCGAAAGGGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATCAAAGCCAAACACTAGGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGGTGGACACAAGGCGATGTGTACGCTAGACTCCGAAGGGGGGTAGATTGGAGGGTCCCACATCGATTGGAGAAGGGAATGAGTGCGAGTGAGGACGTTAGGCCTCAAAGGAGGGTGGATTGTGAGATCTCACATTAGTTGGGGAGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGATGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAAGCAGACGAATTTTAAAAACCTTGAGGAAAAGTCTAAAGAGGACAATATCTGCTAACGCTGGGCTTCTACACATCTTGCCCGCTGTATGTCATGTAGTTAATATTTTTTTCTCTTTCTTTTTTACTTTCCCTTTTCTCTATCTAGCAGGCTAACTGCGGGAACAAATGTCCTGCATGTTAGATGCTGAATATTACTTGTAACAATCTGCAGACATGTAAATGTTTACACAAAGAATCTAGATGCTATCTGGTGCATATGAACAGCAAAGGGATAACAATAAAATTTGCAAGGAGGCAACAAGGACAAGATAAGGTAGCTAACTGTCAGTAAACCTACACCTTTGGTTGCTTGAAGTACAGATACAAGCAAGAATTTAGGAAGAAAAAAACACTCTAGAGAAAAGATGAGCAATAAATGACTCAGAGTTCTTAAGTTGGAGACTTAGTGCTAAGGTAAACCCCCATATGAATAAGAGAGGGAGAAAAACATGATCTGGCATTGAGAAACTTAGTCACCAGCCTAGATGTTCAGTGTTACGGTCATGTTTGTCCAAGGTGTGTTGCCTATGGCCGTATGGCTGATATCCCGGTCTTGCTTGTCCAGGACGTGTTGTCCATGGTTGCATGCCTGTACCAAACCCCTTTTACACTTTCATCTTAGATAGGCCTTTACCATTTCAAGTTGGGTCAATACGGGGTGAATGACCGTTCACCAAAACCATGTCTACACTTGCAAGAGCTAAAATGCCCAAAAATGTATTGCAGGGGGATATGACTAGTTGTCACTTCTTCCTACCTTGAGTTATATGCTATTTAAGCCGTGATATTTCTTTATGTGCTTATAGTCATATAACGTTGCTTTCTTCAATTCTTCAAATCGTTTTCAAATGTATTTCCTCGCTCACGTTTTCTAAATCTTTTCTTGCAATGTAACTCGAGGCCCGAACATACGTCAACGTTGTTCACAACGTCCGAATTTCTGACGGTTGACTTGTTTGTTTGGTTAGAACAAGTATCACACAATTGCAAGAGTGCGATTGTGATACTTGGCAAACTACGGCAGTGTTGTCGTCATTAGTTCTAACTTTCAATACCTTCACATTGATCATAGTAATCAAATCATGAACCCAGATTTGCTACATGATAGCTATGTCTTAACTTCACCAAATTGGATTTCCTCTATGGAAGCTGTAATTTACTCTCTTATTCTAAATAATTCAACAATCCAAACAATTTTGGAACTGTGGGAACACAGCCAAATCCTCAATTCAAAGGTACAGTATATTAATAGATTACGTGTTCATCAGCCATTGAATATGAGAAATAGGAAATCCCTGAATTTCGAGATTTCCACGTGGAATTCACATGTCCACATCTTGATCATACATGGATCCAGCTACAGCCATACCCCACCAATGGACTCACATTTTACACAGTTTTGCATTTGTCTTAGAGTGGATGCCTTGTCTCTTGGTCTCCAAATGAGGCAACTCACTTTGTTTCTTAGTAACTTGTAGCTTAGCTGAAAATAAGGATGCTAACTTACTGACTTAAAGGTCATTGGTAGATTTTGATGGCAGATTGGCAGGCTTGTCAGTGCCCGTCAATCATAGTTATCGACAATGGTTGGGAAGAACATGTTCACAAACTATGTAGTGAACTCTTGATGAATATGTTGGCTTCAATGATAAGTTGAACGGAACGAAAAATACGGTATCTAGTCGTTATTGAAAATCCTGGCTTTAGTTGAATAAACTGATGTGTATCATCAGGTTATACTATTGATCTGATAAAGTTCTCTTGGTTGGATAATGAGTAGAGTATAAGGGAATGAATAGTTCAGCTGTGATATATTTGAACCTCAGATGAAGGACTCCCGGGCAGATAATGTGAGATCCCACATCGGATGGGGAGGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAGCATATGCATTTTAAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGATAGAATTGGGTTGTTACCAATGGTATCAGAGCCAGAGCCAGACACTGGGCCCCGAGGGGGGTGGACATGAGACAGTGTGCCAGCAAAGACGCTGGGCCCCGAAAGAGGTGGATTGGGGGTCCCACATCGATTGGAGAATGGAACGAGTGTCAGCGAGAACGTTGGGCACTGAAGGGGGGTGGTTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGGAAACCTCTCTCTAGCGAACGTGTTTTAGAAACCTTGAGGGGACCGTTAAGTATTCATTATCATAACCATTAGTGCTAATCATCTCTGCAGCCAACAATATCAAACAAGCATAACTTCTCTCTCAATCTATCTAGAATGACATGGTAGGCTTTCTAGATTAAACACTTTTTCTGATATAAGCAATCATGAGATTCTATCAACCAGTTTGGTTAGTGTTTGTTTGAAGAAAGATATGAGTATCTATATCTCTTTTTAAGTATGTCCATGGAGGATAGCTACACATTCAACACTGTGTCTGTGCAACCTAAACTCGACACGTATGCAAACTCATCACGCTATAAACTTCGACTTGGAGGTATTCGAACAACTCTCCTATTTTTCCACATGGTTTGATGTTGAAAATAATTTCCAACCAAATTTTTTGTAACTTTCTATATGTTTCTTTGCTCAGTTCTTCAAGATCATTCTAGGAATCCACTGAATTCCAACTCATTAACAGTTCCTCAAATATCTATACCTACTTTTAGTCCTCTATTTATGTCTCCTATGATGAGCTGA

mRNA sequence

CTCCACCTTCTTTGGGTTAAGTAACTTAATTTAGACACTAATCTGGATTTTCATTGGCCTATTAAACAAATTCTTTATTAGTTCTATAGTTTAAGAGAGAGAGAGATTGGAAGGGTGTTGTTTGGCACATGGGTTTTGCTGAAAGACGAGAATAATGCGAAGAGCGGCGTTAGTATTTGACTCCAATATTTTCCGGGAAAAAGAAAAATTTCCCGGGAAAATTTCCCAGAATCTTCTCTGATCAGCGAAGAACGATGTAGGGTTTGCTTCGAATTTTCCCTTCATTCAATCTGTTTGTCTTCCACTCCAACATAGCTACAAACTTCAAAGGGACTGTCAATGGATGGGATTGAGGTTCAATCCAGAAACATCCACTTCCAATGGATATGGTCCATCAGCTCTCGTTTCTGTCCATCTAGGCAGCATCCAAGTAGAGATAGGAGTAGCAAACAGTCGAGGAGGAGCACGCCGCCATTAAACATGGAACTTGGTTTGGCATCAGTATTGTGAGATCCCGCATCAGTTGGGGAGGAGAACAAAGCATTCTTTATAAGCGTGTGGAAACCTCTCCCTAGTAGACACATTTTAAAAACCTTGAGGGAAAGCTTGAAAGAGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATTAGAGCCAAACACCAAGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGAGGAGAACGAACATTCTTTATAAGGATGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGGAAACTCGAAAGGGAAAACCCAAATAGGACAATATCTGCTAGCGGTGGGCTTGAGCCACTACAAATGGTATCAAAGCCAAACACTAGGCAATGTGTCAGCGAGGAGACTGAGCCTTGAAGGGGGTGGACACAAGGCGATGTGTACGCTAGACTCCGAAGGGGGGTAGATTGGAGGGTCCCACATCGATTGGAGAAGGGAATGAGTGCGAGTGAGGACGTTAGGCCTCAAAGGAGGGTGGATTGTGAGATCTCACATTAGTTGGGGAGAAGTATTCTTTATAAGGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGATGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAGCGTGGAAACCTCTCCCTAAATGGTGTGGAAACCTCTCCTTAAAGGGTTTGGAAACCTCTTCCTAAGCAGACGAATTTTAAAAACCTTGAGGAAAAGTCTAAAGAGGACAATATCTGCTAACGCTGGGCTTCTACACATCTTGCCCGCTGTATGTCATGTAGTTAATATTTTTTTCTCTTTCTTTTTTACTTTCCCTTTTCTCTATCTAGCAGGCTAACTGCGGGAACAAATGTCCTGCATGTTAGATGCTGAATATTACTTGTAACAATCTGCAGACATGTAAATGTTTACACAAAGAATCTAGATGCTATCTGGTGCATATGAACAGCAAAGGGATAACAATAAAATTTGCAAGGAGGCAACAAGGACAAGATAAGGTAGCTAACTGTCAGTAAACCTACACCTTTGGTTGCTTGAAGTACAGATACAAGCAAGAATTTAGGAAGAAAAAAACACTCTAGAGAAAAGATGAGCAATAAATGACTCAGAGTTCTTAAGTTGGAGACTTAGTGCTAAGGTAAACCCCCATATGAATAAGAGAGGGAGAAAAACATGATCTGGCATTGAGAAACTTAGTCACCAGCCTAGATGTTCAGTGTTACGGTCATGTTTGTCCAAGGTGTGTTGCCTATGGCCGTATGGCTGATATCCCGGTCTTGCTTGTCCAGGACGTGTTGTCCATGGTTGCATGCCTGTACCAAACCCCTTTTACACTTTCATCTTAGATAGGCCTTTACCATTTCAAGTTGGGTCAATACGGGGTGAATGACCGTTCACCAAAACCATGTCTACACTTGCAAGAGCTAAAATGCCCAAAAATGTATTGCAGGGGGATATGACTAGTTGTCACTTCTTCCTACCTTGAGTTATATGCTATTTAAGCCGTGATATTTCTTTATGTGCTTATAGTCATATAACGTTGCTTTCTTCAATTCTTCAAATCGTTTTCAAATGTATTTCCTCGCTCACGTTTTCTAAATCTTTTCTTGCAATGTAACTCGAGGCCCGAACATACGTCAACGTTGTTCACAACGTCCGAATTTCTGACGGTTGACTTGTTTGTTTGGTTAGAACAAGTATCACACAATTGCAAGAGTGCGATTGTGATACTTGGCAAACTACGGCAGTGTTGTCGTCATTAGTTCTAACTTTCAATACCTTCACATTGATCATAGTAATCAAATCATGAACCCAGATTTGCTACATGATAGCTATGTCTTAACTTCACCAAATTGGATTTCCTCTATGGAAGCTGTAATTTACTCTCTTATTCTAAATAATTCAACAATCCAAACAATTTTGGAACTGTGGGAACACAGCCAAATCCTCAATTCAAAGGTACAGTATATTAATAGATTACGTGTTCATCAGCCATTGAATATGAGAAATAGGAAATCCCTGAATTTCGAGATTTCCACGTGGAATTCACATGTCCACATCTTGATCATACATGGATCCAGCTACAGCCATACCCCACCAATGGACTCACATTTTACACAGTTTTGCATTTGTCTTAGAGTGGATGCCTTGTCTCTTGGTCTCCAAATGAGGCAACTCACTTTGTTTCTTAGTAACTTGTAGCTTAGCTGAAAATAAGGATGCTAACTTACTGACTTAAAGGTCATTGGTAGATTTTGATGGCAGATTGGCAGGCTTGTCAGTGCCCGTCAATCATAGTTATCGACAATGGTTGGGAAGAACATGTTCACAAACTATGTAGTGAACTCTTGATGAATATGTTGGCTTCAATGATAAGTTGAACGGAACGAAAAATACGGTATCTAGTCGTTATTGAAAATCCTGGCTTTAGTTGAATAAACTGATGTGTATCATCAGGTTATACTATTGATCTGATAAAGTTCTCTTGGTTGGATAATGAGTAGAGTATAAGGGAATGAATAGTTCAGCTGTGATATATTTGAACCTCAGATGAAGGACTCCCGGGCAGATAATGTGAGATCCCACATCGGATGGGGAGGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAGCATATGCATTTTAAAAACTTTGAGGGGAAGCCCAAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGATAGAATTGGGTTGTTACCAATGGTATCAGAGCCAGAGCCAGACACTGGGCCCCGAGGGGGGTGGACATGAGACAGTGTGCCAGCAAAGACGCTGGGCCCCGAAAGAGGTGGATTGGGGGTCCCACATCGATTGGAGAATGGAACGAGTGTCAGCGAGAACGTTGGGCACTGAAGGGGGGTGGTTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGGAAACCTCTCTCTAGCGAACGTGTTTTAGAAACCTTGAGGGGACCGTTAAGTATTCATTATCATAACCATTAGTGCTAATCATCTCTGCAGCCAACAATATCAAACAAGCATAACTTCTCTCTCAATCTATCTAGAATGACATGGTAGGCTTTCTAGATTAAACACTTTTTCTGATATAAGCAATCATGAGATTCTATCAACCAGTTTGGTTAGTGTTTGTTTGAAGAAAGATATGAGTATCTATATCTCTTTTTAAGTATGTCCATGGAGGATAGCTACACATTCAACACTGTGTCTGTGCAACCTAAACTCGACACGTATGCAAACTCATCACGCTATAAACTTCGACTTGGAGTTCTTCAAGATCATTCTAGGAATCCACTGAATTCCAACTCATTAACAGTTCCTCAAATATCTATACCTACTTTTAGTCCTCTATTTATGTCTCCTATGATGAGCTGA

Coding sequence (CDS)

ATGTCCATGGAGGATAGCTACACATTCAACACTGTGTCTGTGCAACCTAAACTCGACACGTATGCAAACTCATCACGCTATAAACTTCGACTTGGAGTTCTTCAAGATCATTCTAGGAATCCACTGAATTCCAACTCATTAACAGTTCCTCAAATATCTATACCTACTTTTAGTCCTCTATTTATGTCTCCTATGATGAGCTGA

Protein sequence

MSMEDSYTFNTVSVQPKLDTYANSSRYKLRLGVLQDHSRNPLNSNSLTVPQISIPTFSPLFMSPMMS
Homology
[Close]
BLAST of CmoCh11G016040 vs. NCBI nr
Match: KAG7022655.1 (Protein LAZY 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.8 bits (242), Expect = 3.7e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 1  MSMEDSYTFNTVSVQPKLDTYANSSRYKLRLGVLQDHSRNPLNSNSLT 49
          MSMEDSYTFNTVSVQPKLDTYANSSRYKLRLGVLQDHSRNPLNSNSLT
Sbjct: 1  MSMEDSYTFNTVSVQPKLDTYANSSRYKLRLGVLQDHSRNPLNSNSLT 48

The following BLAST results are available for this feature:
BLAST of CmoCh11G016040 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G016040 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G016040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7022655.13.7e-17100.00Protein LAZY 1 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmoCh11G016040 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G016040.1CmoCh11G016040.1mRNA