CmoCh11G015940 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015940
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	glutaredoxin-C1-like
Location	Cmo_Chr11: 11440234 .. 11440590 (+)
RNA-Seq Expression	CmoCh11G015940
Synteny	CmoCh11G015940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCACCAAGCAAAGCAATCGTACTCGGGGAACGACCCGTTGTGGCGGATAGAGAGGATGGCGGCGGAGAACGCGGTGGTCATGTTTAGTATGAGCTCATGTTGCATGTGTCACGCTGTGAAGCGGCTGTTTTGTGGAATGGGAGTTAACCCTACGGTTTACGAGCTTGACGAGGACCCAAGAGGGAAGGAGATTGAGAAGGCGTTGATGCGGTTAATGGGAAGCTCCTCCCCCGTCGTTCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGGTCCATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTTGTCCCTCTCCTCAAAGATGCTGGCGCTCTTTGGCTCTAA

mRNA sequence

ATGCAGCACCAAGCAAAGCAATCGTACTCGGGGAACGACCCGTTGTGGCGGATAGAGAGGATGGCGGCGGAGAACGCGGTGGTCATGTTTAGTATGAGCTCATGTTGCATGTGTCACGCTGTGAAGCGGCTGTTTTGTGGAATGGGAGTTAACCCTACGGTTTACGAGCTTGACGAGGACCCAAGAGGGAAGGAGATTGAGAAGGCGTTGATGCGGTTAATGGGAAGCTCCTCCCCCGTCGTTCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGGTCCATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTTGTCCCTCTCCTCAAAGATGCTGGCGCTCTTTGGCTCTAA

Coding sequence (CDS)

ATGCAGCACCAAGCAAAGCAATCGTACTCGGGGAACGACCCGTTGTGGCGGATAGAGAGGATGGCGGCGGAGAACGCGGTGGTCATGTTTAGTATGAGCTCATGTTGCATGTGTCACGCTGTGAAGCGGCTGTTTTGTGGAATGGGAGTTAACCCTACGGTTTACGAGCTTGACGAGGACCCAAGAGGGAAGGAGATTGAGAAGGCGTTGATGCGGTTAATGGGAAGCTCCTCCCCCGTCGTTCCCGCTGTCTTCATCGGCGGGAAACTTGTTGGGTCCATGGATAGAGTCATGGCCTCTCATATCAATGGCTCCCTTGTCCCTCTCCTCAAAGATGCTGGCGCTCTTTGGCTCTAA

Protein sequence

MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL

Homology

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BLAST of CmoCh11G015940 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.1e-42
Identity = 82/108 (75.93%), Postives = 98/108 (90.74%), Query Frame = 0


Query: 17  RIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMG- 76
           R+ER+A+E+AVV+FS+SSCCMCHAVKRLFCGMGV+PTV+ELD DPRG+E+E+AL RL+G 
Sbjct: 28  RVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELDLDPRGRELERALARLVGY 87

Query: 77  -----SSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
                +S PVVP VFIGGKLVG+MDRVMA+HINGSLVPLLK+AGALWL
Sbjct: 88  GGPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of CmoCh11G015940 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 164.5 bits (415), Expect = 7.4e-40
Identity = 77/105 (73.33%), Postives = 96/105 (91.43%), Query Frame = 0


Query: 17  RIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM-- 76
           R+ER+A+E+AVV+FS+SSCCMCHAVKRLFCGMGV+P V+ELD DPRG+++E+AL RL+  
Sbjct: 31  RVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLERALARLVGA 90

Query: 77  -GSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
            G+++  VP VFIGGKLVG+MDRVMA+HINGSLVPLLK+AGALWL
Sbjct: 91  GGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGALWL 135

[Close]

BLAST of CmoCh11G015940 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 7.0e-38
Identity = 74/102 (72.55%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 17  RIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMGS 76
           R+ R+AA+ AVV+FSMSSCCMCH V RLFC +GVNPTV ELDEDPRGKE+EKAL RL+G 
Sbjct: 3   RVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLG- 62

Query: 77  SSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
            SP VPAVFIGG+LVGS D+VM+ H++G+LVPLL++AGALW+
Sbjct: 63  RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of CmoCh11G015940 vs. ExPASy Swiss-Prot
Match: Q8LF89 (Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 1.3e-36
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 12  NDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALM 71
           ++ L +IE MAAENAVV+FS+S+CCMCHA+KRLF GMGV+P V+ELD  P G EI +AL+
Sbjct: 28  SETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALL 87

Query: 72  RLMGSSS------PVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           RL+G SS        +P VFIGGK+VG+M+RVMASHINGSLVPLLKDAGALWL
Sbjct: 88  RLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmoCh11G015940 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 5.0e-36
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 15  LWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM 74
           L RIE +A+E+AVV+FS+S+CCMCHAVK LF GMGV+P V+ELD  P G +I++AL+RL+
Sbjct: 29  LLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLL 88

Query: 75  ---GSSSP-VVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
              GSSSP  +P VFIGGKLVG+MDRVMASHINGSLVPLLKDAGALWL
Sbjct: 89  GCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of CmoCh11G015940 vs. ExPASy TrEMBL
Match: A0A6J1EJD2 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111435140 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.7e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60
           MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED
Sbjct: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60

Query: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL
Sbjct: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 118

[Close]

BLAST of CmoCh11G015940 vs. ExPASy TrEMBL
Match: A0A6J1JL10 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111486737 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60
           MQHQAKQSYSGND LWRIERMAAENAVVMFSMSSCCMCHAVK+LFCGMGVNPTVYELDED
Sbjct: 1   MQHQAKQSYSGNDTLWRIERMAAENAVVMFSMSSCCMCHAVKQLFCGMGVNPTVYELDED 60

Query: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL 117
           PRGKEIEKALMRLMGSSSP +PAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL
Sbjct: 61  PRGKEIEKALMRLMGSSSPAIPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL 116

[Close]

BLAST of CmoCh11G015940 vs. ExPASy TrEMBL
Match: A0A6J1J7B3 (glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.7e-51
Identity = 105/122 (86.07%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MQHQAKQSY----SGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYE 60
           MQ+QA+Q Y    S + P+ RIE+MAAENAVVMFS+SSCCMCHAVKRLFCGMGVNPTVYE
Sbjct: 1   MQYQAQQQYGASSSSSSPMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYE 60

Query: 61  LDEDPRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL 119
           LDEDPRGKEIEKALMRLMGSSS  VPAVFIGGKLVGSMDRVMASHINGSLVPLLK+AGAL
Sbjct: 61  LDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGAL 120

[Close]

BLAST of CmoCh11G015940 vs. ExPASy TrEMBL
Match: A0A6J1F512 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.8e-50
Identity = 106/123 (86.18%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MQHQAKQSY----SGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYE 60
           MQ+QA+Q Y    S + P+ RIERMAAENAVVMFS+SSCCMCHAVKRLFCGMGVNPTVYE
Sbjct: 1   MQYQAQQQYGASSSSSSPMRRIERMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYE 60

Query: 61  LDEDPRGKEIEKALMRLMG-SSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGA 119
           LDEDPRGKEIEKALMRLMG SSS  VPAVFIGGKLVGSMDRVMASHINGSLVPLLK+AGA
Sbjct: 61  LDEDPRGKEIEKALMRLMGSSSSSAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGA 120

[Close]

BLAST of CmoCh11G015940 vs. ExPASy TrEMBL
Match: A0A0A0LB28 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G563270 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.8e-49
Identity = 106/128 (82.81%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MQHQAKQ----------SYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGV 60
           MQ+QA+Q          SYS NDP+ RIERMAAENAVVMFSM+SCCMCHAVKRLFCGMGV
Sbjct: 1   MQYQAQQQYGASASSSSSYSANDPMRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGV 60

Query: 61  NPTVYELDEDPRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLL 119
             TVYELDEDPRGKEIEKALMRLMGSSS  VPAVFIGGKL+GSMDRVMASHINGSLVPLL
Sbjct: 61  KTTVYELDEDPRGKEIEKALMRLMGSSS-AVPAVFIGGKLIGSMDRVMASHINGSLVPLL 120

[Close]

BLAST of CmoCh11G015940 vs. NCBI nr
Match: XP_022928247.1 (glutaredoxin-C1-like [Cucurbita moschata])

HSP 1 Score: 243.4 bits (620), Expect = 9.6e-61
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60
           MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED
Sbjct: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60

Query: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL
Sbjct: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 118

[Close]

BLAST of CmoCh11G015940 vs. NCBI nr
Match: XP_023530928.1 (glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 2.8e-60
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60
           MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED
Sbjct: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60

Query: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           PRGKEIEKALMRLMGSSSP VPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL
Sbjct: 61  PRGKEIEKALMRLMGSSSPAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 118

[Close]

BLAST of CmoCh11G015940 vs. NCBI nr
Match: XP_022989746.1 (glutaredoxin-C1-like [Cucurbita maxima])

HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MQHQAKQSYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDED 60
           MQHQAKQSYSGND LWRIERMAAENAVVMFSMSSCCMCHAVK+LFCGMGVNPTVYELDED
Sbjct: 1   MQHQAKQSYSGNDTLWRIERMAAENAVVMFSMSSCCMCHAVKQLFCGMGVNPTVYELDED 60

Query: 61  PRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL 117
           PRGKEIEKALMRLMGSSSP +PAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL
Sbjct: 61  PRGKEIEKALMRLMGSSSPAIPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL 116

[Close]

BLAST of CmoCh11G015940 vs. NCBI nr
Match: XP_022983419.1 (glutaredoxin-C1-like [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50
Identity = 105/122 (86.07%), Postives = 112/122 (91.80%), Query Frame = 0


Query: 1   MQHQAKQSY----SGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYE 60
           MQ+QA+Q Y    S + P+ RIE+MAAENAVVMFS+SSCCMCHAVKRLFCGMGVNPTVYE
Sbjct: 1   MQYQAQQQYGASSSSSSPMRRIEQMAAENAVVMFSISSCCMCHAVKRLFCGMGVNPTVYE 60

Query: 61  LDEDPRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGAL 119
           LDEDPRGKEIEKALMRLMGSSS  VPAVFIGGKLVGSMDRVMASHINGSLVPLLK+AGAL
Sbjct: 61  LDEDPRGKEIEKALMRLMGSSSAAVPAVFIGGKLVGSMDRVMASHINGSLVPLLKNAGAL 120

[Close]

BLAST of CmoCh11G015940 vs. NCBI nr
Match: XP_038874416.1 (glutaredoxin-C1-like [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 5.9e-50
Identity = 108/127 (85.04%), Postives = 112/127 (88.19%), Query Frame = 0


Query: 1   MQHQAKQ---------SYSGNDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVN 60
           MQ+QA+Q         SYS ND L RIERMAAENAVVMFSM+SCCMCHAVKRLFCGMGVN
Sbjct: 1   MQYQAQQQYGSSSSSSSYSANDSLRRIERMAAENAVVMFSMTSCCMCHAVKRLFCGMGVN 60

Query: 61  PTVYELDEDPRGKEIEKALMRLMGSSSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLK 119
           PTVYELDEDPRGKEIEKALMRLMGSSS  VPAVFIGGKLVGSMDRVM SHINGSLVPLLK
Sbjct: 61  PTVYELDEDPRGKEIEKALMRLMGSSS-AVPAVFIGGKLVGSMDRVMVSHINGSLVPLLK 120

[Close]

BLAST of CmoCh11G015940 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 153.7 bits (387), Expect = 9.3e-38
Identity = 77/113 (68.14%), Postives = 93/113 (82.30%), Query Frame = 0


Query: 12  NDPLWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALM 71
           ++ L +IE MAAENAVV+FS+S+CCMCHA+KRLF GMGV+P V+ELD  P G EI +AL+
Sbjct: 28  SETLAKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALL 87

Query: 72  RLMGSSS------PVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           RL+G SS        +P VFIGGK+VG+M+RVMASHINGSLVPLLKDAGALWL
Sbjct: 88  RLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of CmoCh11G015940 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 3.5e-37
Identity = 78/108 (72.22%), Postives = 93/108 (86.11%), Query Frame = 0


Query: 15  LWRIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLM 74
           L RIE +A+E+AVV+FS+S+CCMCHAVK LF GMGV+P V+ELD  P G +I++AL+RL+
Sbjct: 29  LLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLL 88

Query: 75  ---GSSSP-VVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
              GSSSP  +P VFIGGKLVG+MDRVMASHINGSLVPLLKDAGALWL
Sbjct: 89  GCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of CmoCh11G015940 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-29
Identity = 61/101 (60.40%), Postives = 78/101 (77.23%), Query Frame = 0


Query: 18  IERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMGSS 77
           +++M +E +VV+FS +SCCM H +K LF  +GVNPT+YELDE  RGKEIE AL +L    
Sbjct: 4   LQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL--GC 63

Query: 78  SPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           SP VP VFIGG+LVG  ++VM+ H+N SLVP+LK AGALWL
Sbjct: 64  SPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

[Close]

BLAST of CmoCh11G015940 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 18  IERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMGSS 77
           I +M  E  VV++S SSCCM H +K L C  G NP VYELDE  RG+EIE+AL+RL    
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL--GC 63

Query: 78  SPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
           SP VP VFIGG+LVG  + VM+ H+NGSL+P+LK AGALW+
Sbjct: 64  SPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of CmoCh11G015940 vs. TAIR 10
Match: AT4G15680.1 (Thioredoxin superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 2.7e-29
Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 0


Query: 17  RIERMAAENAVVMFSMSSCCMCHAVKRLFCGMGVNPTVYELDEDPRGKEIEKALMRLMGS 76
           ++++M +E +VV+FS +SCCM H +K LF   GVNPT+YELDE  RGKEIE+AL +L   
Sbjct: 3   KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELDEINRGKEIEQALAQL--G 62

Query: 77  SSPVVPAVFIGGKLVGSMDRVMASHINGSLVPLLKDAGALWL 119
            SP VP VFIGG+LVG  ++VM+ H+N SLVP+LK  GALWL
Sbjct: 63  CSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGALWL 102

The following BLAST results are available for this feature:

BLAST of CmoCh11G015940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K609	6.1e-42	75.93	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q0JDM4	7.4e-40	73.33	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q7G8Y5	7.0e-38	72.55	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]
Q8LF89	1.3e-36	68.14	Glutaredoxin-C8 OS=Arabidopsis thaliana OX=3702 GN=GRXC8 PE=1 SV=2	[more]
Q96305	5.0e-36	72.22	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]

BLAST of CmoCh11G015940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJD2	4.7e-61	100.00	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111435140 PE=3 SV=1	[more]
A0A6J1JL10	2.4e-57	96.55	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111486737 PE=3 SV=1	[more]
A0A6J1J7B3	5.7e-51	86.07	glutaredoxin-C1-like OS=Cucurbita maxima OX=3661 GN=LOC111482029 PE=3 SV=1	[more]
A0A6J1F512	4.8e-50	86.18	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111442181 PE=3 SV=1	[more]
A0A0A0LB28	1.8e-49	82.81	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G56327...	[more]

BLAST of CmoCh11G015940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928247.1	9.6e-61	100.00	glutaredoxin-C1-like [Cucurbita moschata]	[more]
XP_023530928.1	2.8e-60	99.15	glutaredoxin-C1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022989746.1	4.9e-57	96.55	glutaredoxin-C1-like [Cucurbita maxima]	[more]
XP_022983419.1	1.2e-50	86.07	glutaredoxin-C1-like [Cucurbita maxima]	[more]
XP_038874416.1	5.9e-50	85.04	glutaredoxin-C1-like [Benincasa hispida]	[more]

BLAST of CmoCh11G015940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14070.1	9.3e-38	68.14	Thioredoxin superfamily protein	[more]
AT3G02000.1	3.5e-37	72.22	Thioredoxin superfamily protein	[more]
AT4G15700.1	1.2e-29	60.40	Thioredoxin superfamily protein	[more]
AT5G18600.1	1.6e-29	59.41	Thioredoxin superfamily protein	[more]
AT4G15680.1	2.7e-29	58.82	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 18..118 e-value: 5.6E-44 score: 146.1
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 4..117
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 15..117 e-value: 2.4E-31 score: 109.7
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 4..117
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..35 score: 5.0
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 15..117 score: 22.754873
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 26..109 e-value: 5.30253E-40 score: 126.115
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 27..91 e-value: 2.0E-14 score: 53.5
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 17..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015940.1	CmoCh11G015940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048653	anther development
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0097573	glutathione oxidoreductase activity