CmoCh11G015900 (gene) Cucurbita moschata (Rifu) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACACCACACCACTCCCTCTCTCTCTCTCTCTCTCTATCTCAACCCTTCATCTCTTTCTCTCTCTTGTTCTTATTCTCTCTCTTGTTCTTATTCTCTCTCCTGCAGTCCAGATTATTATAAAAACCAGAGCAAACCAATCCCACATGGGTTCTTCTTTCTTTTGCATTTATATTTCAGAGTTTCTTTGAAATCTAATCTTCATCATCAGAGAACAGAGGGTTTGTTGTGCAATACTTACTCTAATTTTTTGCAATGGAGAAGACCTCAAACTTTGTCATTAATGGAGGGATGATGAGATTACCTGTTGGGTATCGATTTTGCCCCACAGATGAGGAGCTGGTCGAGCACTACTTGAAGAGGAAGGCGTTTGATTTGCCTCTCCCTGCTTCGGTCATTCCCGACTTTGATGTCTTCCTCACAGATCCATCGGCCTTTCCTGGTAACACAACTATAACAATTCAAATTCAAATTCAGCTCATTACTGAGTTTCAGTTTCTTAATTTCTATGAATTGATTGGATTCCGTGTTGTTCTTGATGTTCTTGTTGTTGGGTTTTAGGGGATTTTAAGGAAAAAAGATTCTTTTTTAGCAAACAGAGGAGTTTGTTGAGGAGAAACACTGGGTGTGGGATATGGAAGTCCACTGGGAAAGAGAAGTTGATTGTTAACCAGGGCATTAACAAGGTGGTTGGGCTGAGGAAATCTCTGGTTTTTTATGAGTCAAAAGTGTCTGAAAGAACAGCAACGACTCGGTGGGTCATGCATGAATATCGACTGCCACGCTCTGGCTCTGTCTCTGCAACAACAACTCCCAACTCAACACAGGTAACAGACAAGTTTGACCATGGACGTACTCGTGCCAAATTACAACACTGCCCTTCTTTCCATCAAAAGAACTGATTCATTTCCTACTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTCCTAAAATGCAGCTGGAAATGGAGGATTGGGCTGTGTATTCTTTGTTTCAGAAGAGAAGAAGGCCTAAAAAGAAAGAGGGAAGGAAAGTGGCGCAGGGAAGTGTAATGGGTTTGTTGAGGGTGGAGGAGAATGGTGGGGAATTTTCTCAGCCTTGTTCTTCGTGTTCAAGTGGAGTCACTCAAGTCTCTTCAAATGGTACGGAAAGTACAGATCAGGAAGAGAGCAGTAGTGACTTAGGCTTAGGTTTNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAACAATTTCTGATTCCGAATTCTAGTCGGACTAGGATTTTTCCAACTTCTTACGTTCCATAAAACGCAACACAAGGAAAGATCCTTGTCTTTCTCACACCACACCACTCCCTCTCTCTCTCTCTCTCTCTATCTCAACCCTTCATCTCTTTCTCTCTCTTGTTCTTATTCTCTCTCTTGTTCTTATTCTCTCTCCTGCAGTCCAGATTATTATAAAAACCAGAGCAAACCAATCCCACATGGGTTCTTCTTTCTTTTGCATTTATATTTCAGAGTTTCTTTGAAATCTAATCTTCATCATCAGAGAACAGAGGGTTTGTTGTGCAATACTTACTCTAATTTTTTGCAATGGAGAAGACCTCAAACTTTGTCATTAATGGAGGGATGATGAGATTACCTGTTGGGTATCGATTTTGCCCCACAGATGAGGAGCTGGTCGAGCACTACTTGAAGAGGAAGGCGTTTGATTTGCCTCTCCCTGCTTCGGTCATTCCCGACTTTGATGTCTTCCTCACAGATCCATCGGCCTTTCCTGGTAACACAACTATAACAATTCAAATTCAAATTCAGCTCATTACTGAGTTTCAGTTTCTTAATTTCTATGAATTGATTGGATTCCGTGTTGTTCTTGATGTTCTTGTTGTTGGGTTTTAGGGGATTTTAAGGAAAAAAGATTCTTTTTTAGCAAACAGAGGAGTTTGTTGAGGAGAAACACTGGGTGTGGGATATGGAAGTCCACTGGGAAAGAGAAGTTGATTGTTAACCAGGGCATTAACAAGGTGGTTGGGCTGAGGAAATCTCTGGTTTTTTATGAGTCAAAAGTGTCTGAAAGAACAGCAACGACTCGGTGGGTCATGCATGAATATCGACTGCCACGCTCTGGCTCTGTCTCTGCAACAACAACTCCCAACTCAACACAGGTAACAGACAAGTTTGACCATGGACGTACTCGTGCCAAATTACAACACTGCCCTTCTTTCCATCAAAAGAACTGATTCATTTCCTACTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTCCTAAAATGCAGCTGGAAATGGAGGATTGGGCTGTGTATTCTTTGTTTCAGAAGAGAAGAAGGCCTAAAAAGAAAGAGGGAAGGAAAGTGGCGCAGGGAAGTGTAATGGGTTTGTTGAGGGTGGAGGAGAATGGTGGGGAATTTTCTCAGCCTTGTTCTTCGTGTTCAAGTGGAGTCACTCAAGTCTCTTCAAATGGTACGGAAAGTACAGATCAGGAAGAGAGCAGTAGTGACTTAGGCTTAGGTTTAGGCTTAGGCTTAGGCTTTTCTTCTTCATATTATGAAGCTCACGTGAGAGGGGTGTGAATTGTGAGAGCTTCCCCACTCTCTAATGGCTGAAAAAAAGTTGAATTTGTTTCGTTTTTGGGTTACTTTGGACTCTGTTTAAGCAACGAGATTGAGTCAAAAAGAGAAGAAAAAAGGGCAAATTTAACTACTACTACTACTACACTACTCTACTCTTCCACAGAGGAAAGAAAAAAAGAAAGAAAGATGTCTTTTTAATTTCCACCTTTTCAATGCGATTTGAGTTTCAACTTTTTGTGTGCCATGCTTCTGTAATCCAATCCTACCGAGTAATCATGGGGCTGAAGGAAGGGAGGAGGAAAGTGGGGAACTTTTTAAATTTTTTTGGGTATTTTAGGTGTTTCCATATCAAAAACTAGAAGCTAAGTCCAAAC ACACCACACCACTCCCTCTCTCTCTCTCTCTCTCTATCTCAACCCTTCATCTCTTTCTCTCTCTTGTTCTTATTCTCTCTCTTGTTCTTATTCTCTCTCCTGCAGTCCAGATTATTATAAAAACCAGAGCAAACCAATCCCACATGGGTTCTTCTTTCTTTTGCATTTATATTTCAGAGTTTCTTTGAAATCTAATCTTCATCATCAGAGAACAGAGGGTTTGTTGTGCAATACTTACTCTAATTTTTTGCAATGGAGAAGACCTCAAACTTTGTCATTAATGGAGGGATGATGAGATTACCTGTTGGGTATCGATTTTGCCCCACAGATGAGGAGCTGGTCGAGCACTACTTGAAGAGGAAGGCGTTTGATTTGCCTCTCCCTGCTTCGGTCATTCCCGACTTTGATGTCTTCCTCACAGATCCATCGGCCTTTCCTGGGGATTTTAAGGAAAAAAGATTCTTTTTTAGCAAACAGAGGAGTTTGTTGAGGAGAAACACTGGGTGTGGGATATGGAAGTCCACTGGGAAAGAGAAGTTGATTGTTAACCAGGGCATTAACAAGGTGGTTGGGCTGAGGAAATCTCTGGTTTTTTATGAGTCAAAAGTGTCTGAAAGAACAGCAACGACTCGGTGGGTCATGCATGAATATCGACTGCCACGCTCTGGCTCTGTCTCTGCAACAACAACTCCCAACTCAACACAGCTGGAAATGGAGGATTGGGCTGTGTATTCTTTGTTTCAGAAGAGAAGAAGGCCTAAAAAGAAAGAGGGAAGGAAAGTGGCGCAGGGAAGTGTAATGGGTTTGTTGAGGGTGGAGGAGAATGGTGGGGAATTTTCTCAGCCTTGTTCTTCGTGTTCAAGTGGAGTCACTCAAGTCTCTTCAAATGATGAGGAGCTGGTCGAGCACTACTTGAAGAGGAAGGCGTTTGATTTGCCTCTCCCTGCTTCGGTCATTCCCGACTTTGATGTCTTCCTCACAGATCCATCGGCCTTTCCTGGGGATTTTAAGGAAAAAAGATTCTTTTTTAGCAAACAGAGGAGTTTGTTGAGGAGAAACACTGGGTGTGGGATATGGAAGTCCACTGGGAAAGAGAAGTTGATTGTTAACCAGGGCATTAACAAGGTGGTTGGGCTGAGGAAATCTCTGGTTTTTTATGAGTCAAAAGTGTCTGAAAGAACAGCAACGACTCGGTGGGTCATGCATGAATATCGACTGCCACGCTCTGGCTCTGTCTCTGCAACAACAACTCCCAACTCAACACAGCTGGAAATGGAGGATTGGGCTGTGTATTCTTTGTTTCAGAAGAGAAGAAGGCCTAAAAAGAAAGAGGGAAGGAAAGTGGCGCAGGGAAGTGTAATGGGTTTGTTGAGGGTGGAGGAGAATGGTGGGGAATTTTCTCAGCCTTGTTCTTCGTGTTCAAGTGGAGTCACTCAAGTCTCTTCAAATGGTACGGAAAGTACAGATCAGGAAGAGAGCAGTAGTGACTTAGGCTTAGGTTTAGGCTTAGGCTTAGGCTTTTCTTCTTCATATTATGAAGCTCACGTGAGAGGGGTGTGAATTGTGAGAGCTTCCCCACTCTCTAATGGCTGAAAAAAAGTTGAATTTGTTTCGTTTTTGGGTTACTTTGGACTCTGTTTAAGCAACGAGATTGAGTCAAAAAGAGAAGAAAAAAGGGCAAATTTAACTACTACTACTACTACACTACTCTACTCTTCCACAGAGGAAAGAAAAAAAGAAAGAAAGATGTCTTTTTAATTTCCACCTTTTCAATGCGATTTGAGTTTCAACTTTTTGTGTGCCATGCTTCTGTAATCCAATCCTACCGAGTAATCATGGGGCTGAAGGAAGGGAGGAGGAAAGTGGGGAACTTTTTAAATTTTTTTGGGTATTTTAGGTGTTTCCATATCAAAAACTAGAAGCTAAGTCCAAAC ATGGAGAAGACCTCAAACTTTGTCATTAATGGAGGGATGATGAGATTACCTGTTGGGTATCGATTTTGCCCCACAGATGAGGAGCTGGTCGAGCACTACTTGAAGAGGAAGGCGTTTGATTTGCCTCTCCCTGCTTCGGTCATTCCCGACTTTGATGTCTTCCTCACAGATCCATCGGCCTTTCCTGGGGATTTTAAGGAAAAAAGATTCTTTTTTAGCAAACAGAGGAGTTTGTTGAGGAGAAACACTGGGTGTGGGATATGGAAGTCCACTGGGAAAGAGAAGTTGATTGTTAACCAGGGCATTAACAAGGTGGTTGGGCTGAGGAAATCTCTGGTTTTTTATGAGTCAAAAGTGTCTGAAAGAACAGCAACGACTCGGTGGGTCATGCATGAATATCGACTGCCACGCTCTGGCTCTGTCTCTGCAACAACAACTCCCAACTCAACACAGCTGGAAATGGAGGATTGGGCTGTGTATTCTTTGTTTCAGAAGAGAAGAAGGCCTAAAAAGAAAGAGGGAAGGAAAGTGGCGCAGGGAAGTGTAATGGGTTTGTTGAGGGTGGAGGAGAATGGTGGGGAATTTTCTCAGCCTTGTTCTTCGTGTTCAAGTGGAGTCACTCAAGTCTCTTCAAATGATGAGGAGCTGGTCGAGCACTACTTGAAGAGGAAGGCGTTTGATTTGCCTCTCCCTGCTTCGGTCATTCCCGACTTTGATGTCTTCCTCACAGATCCATCGGCCTTTCCTGGGGATTTTAAGGAAAAAAGATTCTTTTTTAGCAAACAGAGGAGTTTGTTGAGGAGAAACACTGGGTGTGGGATATGGAAGTCCACTGGGAAAGAGAAGTTGATTGTTAACCAGGGCATTAACAAGGTGGTTGGGCTGAGGAAATCTCTGGTTTTTTATGAGTCAAAAGTGTCTGAAAGAACAGCAACGACTCGGTGGGTCATGCATGAATATCGACTGCCACGCTCTGGCTCTGTCTCTGCAACAACAACTCCCAACTCAACACAGCTGGAAATGGAGGATTGGGCTGTGTATTCTTTGTTTCAGAAGAGAAGAAGGCCTAAAAAGAAAGAGGGAAGGAAAGTGGCGCAGGGAAGTGTAATGGGTTTGTTGAGGGTGGAGGAGAATGGTGGGGAATTTTCTCAGCCTTGTTCTTCGTGTTCAAGTGGAGTCACTCAAGTCTCTTCAAATGGTACGGAAAGTACAGATCAGGAAGAGAGCAGTAGTGACTTAGGCTTAGGTTTAGGCTTAGGCTTAGGCTTTTCTTCTTCATATTATGAAGCTCACGTGAGAGGGGTGTGA MEKTSNFVINGGMMRLPVGYRFCPTDEELVEHYLKRKAFDLPLPASVIPDFDVFLTDPSAFPGDFKEKRFFFSKQRSLLRRNTGCGIWKSTGKEKLIVNQGINKVVGLRKSLVFYESKVSERTATTRWVMHEYRLPRSGSVSATTTPNSTQLEMEDWAVYSLFQKRRRPKKKEGRKVAQGSVMGLLRVEENGGEFSQPCSSCSSGVTQVSSNDEELVEHYLKRKAFDLPLPASVIPDFDVFLTDPSAFPGDFKEKRFFFSKQRSLLRRNTGCGIWKSTGKEKLIVNQGINKVVGLRKSLVFYESKVSERTATTRWVMHEYRLPRSGSVSATTTPNSTQLEMEDWAVYSLFQKRRRPKKKEGRKVAQGSVMGLLRVEENGGEFSQPCSSCSSGVTQVSSNGTESTDQEESSSDLGLGLGLGLGFSSSYYEAHVRGV Homology
BLAST of CmoCh11G015900 vs. ExPASy Swiss-Prot
Match: Q9FY93 (NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 9.5e-32 Identity = 72/172 (41.86%), Postives = 106/172 (61.63%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy Swiss-Prot
Match: O22798 (NAC domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=NAC041 PE=2 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 7.5e-29 Identity = 79/185 (42.70%), Postives = 110/185 (59.46%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 9.5e-24 Identity = 64/172 (37.21%), Postives = 94/172 (54.65%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-23 Identity = 79/228 (34.65%), Postives = 110/228 (48.25%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy Swiss-Prot
Match: A0SPJ9 (NAC transcription factor NAM-2 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NAM-2 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.8e-23 Identity = 73/226 (32.30%), Postives = 113/226 (50.00%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy TrEMBL
Match: A0A6J1EK55 (NAC domain-containing protein 83-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435299 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 1.9e-120 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy TrEMBL
Match: A0A6J1EK55 (NAC domain-containing protein 83-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435299 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 1.5e-117 Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0
HSP 2 Score: 426.8 bits (1096), Expect = 1.1e-115 Identity = 219/225 (97.33%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy TrEMBL
Match: A0A6J1JQ41 (NAC domain-containing protein 83-like OS=Cucurbita maxima OX=3661 GN=LOC111486714 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 1.3e-113 Identity = 208/215 (96.74%), Postives = 209/215 (97.21%), Query Frame = 0
HSP 2 Score: 295.0 bits (754), Expect = 5.0e-76 Identity = 153/217 (70.51%), Postives = 172/217 (79.26%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy TrEMBL
Match: A0A6J1J786 (NAC domain-containing protein 83-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481884 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 3.2e-75 Identity = 150/215 (69.77%), Postives = 169/215 (78.60%), Query Frame = 0
BLAST of CmoCh11G015900 vs. ExPASy TrEMBL
Match: A0A6J1F507 (NAC domain-containing protein 83-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111442178 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 9.4e-75 Identity = 151/217 (69.59%), Postives = 172/217 (79.26%), Query Frame = 0
BLAST of CmoCh11G015900 vs. NCBI nr
Match: XP_022928512.1 (NAC domain-containing protein 83-like isoform X1 [Cucurbita moschata] >XP_022928513.1 NAC domain-containing protein 83-like isoform X2 [Cucurbita moschata] >KAG6588881.1 NAC domain-containing protein 83, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 442.6 bits (1137), Expect = 4.0e-120 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of CmoCh11G015900 vs. NCBI nr
Match: XP_022928512.1 (NAC domain-containing protein 83-like isoform X1 [Cucurbita moschata] >XP_022928513.1 NAC domain-containing protein 83-like isoform X2 [Cucurbita moschata] >KAG6588881.1 NAC domain-containing protein 83, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 433.0 bits (1112), Expect = 3.2e-117 Identity = 213/215 (99.07%), Postives = 213/215 (99.07%), Query Frame = 0
HSP 2 Score: 440.3 bits (1131), Expect = 2.0e-119 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of CmoCh11G015900 vs. NCBI nr
Match: KAG7022643.1 (NAC domain-containing protein 83 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 430.6 bits (1106), Expect = 1.6e-116 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
HSP 2 Score: 427.2 bits (1097), Expect = 1.7e-115 Identity = 211/215 (98.14%), Postives = 211/215 (98.14%), Query Frame = 0
BLAST of CmoCh11G015900 vs. NCBI nr
Match: XP_023531158.1 (NAC domain-containing protein 83-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 423.7 bits (1088), Expect = 1.9e-114 Identity = 217/223 (97.31%), Postives = 217/223 (97.31%), Query Frame = 0
HSP 2 Score: 426.8 bits (1096), Expect = 2.3e-115 Identity = 219/225 (97.33%), Postives = 220/225 (97.78%), Query Frame = 0
BLAST of CmoCh11G015900 vs. NCBI nr
Match: XP_022989714.1 (NAC domain-containing protein 83-like [Cucurbita maxima]) HSP 1 Score: 419.9 bits (1078), Expect = 2.8e-113 Identity = 208/215 (96.74%), Postives = 209/215 (97.21%), Query Frame = 0
HSP 2 Score: 295.0 bits (754), Expect = 1.0e-75 Identity = 153/217 (70.51%), Postives = 172/217 (79.26%), Query Frame = 0
BLAST of CmoCh11G015900 vs. TAIR 10
Match: AT5G13180.1 (NAC domain containing protein 83 ) HSP 1 Score: 139.4 bits (350), Expect = 6.7e-33 Identity = 72/172 (41.86%), Postives = 106/172 (61.63%), Query Frame = 0
BLAST of CmoCh11G015900 vs. TAIR 10
Match: AT5G14000.1 (NAC domain containing protein 84 ) HSP 1 Score: 135.6 bits (340), Expect = 9.7e-32 Identity = 82/188 (43.62%), Postives = 117/188 (62.23%), Query Frame = 0
BLAST of CmoCh11G015900 vs. TAIR 10
Match: AT2G33480.1 (NAC domain containing protein 41 ) HSP 1 Score: 129.8 bits (325), Expect = 5.3e-30 Identity = 79/185 (42.70%), Postives = 110/185 (59.46%), Query Frame = 0
BLAST of CmoCh11G015900 vs. TAIR 10
Match: AT2G33480.2 (NAC domain containing protein 41 ) HSP 1 Score: 129.8 bits (325), Expect = 5.3e-30 Identity = 80/185 (43.24%), Postives = 108/185 (58.38%), Query Frame = 0
BLAST of CmoCh11G015900 vs. TAIR 10
Match: AT3G04070.2 (NAC domain containing protein 47 ) HSP 1 Score: 114.4 bits (285), Expect = 2.3e-25 Identity = 61/162 (37.65%), Postives = 91/162 (56.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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