CmoCh11G015840 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015840
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	C2H2-like zinc finger protein
Location	Cmo_Chr11: 11378468 .. 11378932 (-)
RNA-Seq Expression	CmoCh11G015840
Synteny	CmoCh11G015840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACCCTGCCATTTACGACTTCCTTAGCCAAACGACTGCTTCAAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTTTCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAACGAGCAGCTTCGCGTAAGGCCTTCACCTCTGAAATTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTACTACAGCACTGGCTCCGTCGGCGCTTTTTGACGAGCATTGGTTCCACCAGAATAATCACTACCGAGGTACTACCACTACAGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGATGCTGCCGTCGAACACGTAACCATCGATCTCACTCTTCGCTTATGA

mRNA sequence

ATGGCGGACCCTGCCATTTACGACTTCCTTAGCCAAACGACTGCTTCAAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTTTCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAACGAGCAGCTTCGCGTAAGGCCTTCACCTCTGAAATTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTACTACAGCACTGGCTCCGTCGGCGCTTTTTGACGAGCATTGGTTCCACCAGAATAATCACTACCGAGGTACTACCACTACAGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGATGCTGCCGTCGAACACGTAACCATCGATCTCACTCTTCGCTTATGA

Coding sequence (CDS)

ATGGCGGACCCTGCCATTTACGACTTCCTTAGCCAAACGACTGCTTCAAATTCTGTACCGAAAACGACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCACGCATTTTTCCATGCCTTTACTGTCCTCGAAAATTCTACACTTCCCAAGCCCTAGGCGGCCACCAAAATGCTCACAAAAGAGAACGAGCAGCTTCGCGTAAGGCCTTCACCTCTGAAATTCTTCACCTCGGTTCGCTTCAACACTCGAGGCCACCGCCGCCGCCGCCGACTACTTACCACCATCTTGCATCGCCGTCTACTACAGCACTGGCTCCGTCGGCGCTTTTTGACGAGCATTGGTTCCACCAGAATAATCACTACCGAGGTACTACCACTACAGCCTCCGCCTCGCCGAACGATCTCTCACCGAATGCTGATGCTGCCGTCGAACACGTAACCATCGATCTCACTCTTCGCTTATGA

Protein sequence

MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNHYRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL

Homology

[Close]

BLAST of CmoCh11G015840 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 16 SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEIL 75
          + S  K  S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       
Sbjct: 17 TRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR------- 76

Query: 76 HLGSLQHSRP 86
          +LG L +S P
Sbjct: 77 NLGVLANSPP 79

[Close]

BLAST of CmoCh11G015840 vs. ExPASy Swiss-Prot
Match: Q9FKA9 (Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-11
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 20  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLG 79
           P   + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++  
Sbjct: 18  PSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNN 77

Query: 80  SLQHSRPPPPPPTTYHHLASPSTTALAPSALF 111
              H+ P      + HHL      A A  A F
Sbjct: 78  DFLHTLPVFLSSPSQHHLTILGYPASASVACF 109

[Close]

BLAST of CmoCh11G015840 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 26  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL--QHS 85
           KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +   H 
Sbjct: 48  KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA-----MHMGRMFGHHH 104

[Close]

BLAST of CmoCh11G015840 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 28 QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
          Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 59 QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

[Close]

BLAST of CmoCh11G015840 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 10  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
           L+   +S S      ++ Q Q S S R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 57  LTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

[Close]

BLAST of CmoCh11G015840 vs. ExPASy TrEMBL
Match: A0A6J1EJQ6 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.4e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120
           RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 155
           YRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CmoCh11G015840 vs. ExPASy TrEMBL
Match: A0A6J1JQI7 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.9e-79
Identity = 152/156 (97.44%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120
           RERAASRK FTSEILHLGSLQHSRPPPPPPTTYHHLASPS TALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTT--ASASPNDLSPNADAAVEHVTIDLTLRL 155
           YRGTTTT  ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CmoCh11G015840 vs. ExPASy TrEMBL
Match: A0A6J1F843 (protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 3.0e-52
Identity = 123/170 (72.35%), Postives = 131/170 (77.06%), Query Frame = 0


Query: 1   MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60
           MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH
Sbjct: 1   MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  KRERAASRKAFTSEILHLGSLQHSRPPPPPP---TTYHHLASPSTTA--------LAPSA 120
           KRERAASRKAF SEILHLGSL    PPPPPP   TT+HHL  P T A         AP+ 
Sbjct: 61  KRERAASRKAFASEILHLGSL----PPPPPPTTTTTHHHLPQPYTVAPSPTPTPTPAPAD 120

Query: 121 LFDEHWFHQNNHYRGTTTT----ASASPNDLSPNADAAVEHVTIDLTLRL 155
              +HWF+QN++   TTTT    ASASP+ LSPNAD AVEHVTIDLTLRL
Sbjct: 121 FLGQHWFNQNHYSANTTTTASASASASPDALSPNADTAVEHVTIDLTLRL 165

[Close]

BLAST of CmoCh11G015840 vs. ExPASy TrEMBL
Match: A0A6J1J5R2 (protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 119/167 (71.26%), Postives = 127/167 (76.05%), Query Frame = 0


Query: 1   MADPAIYDFLSQ-TTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60
           MADPAIYDFL+Q TTASNS PK  SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH
Sbjct: 1   MADPAIYDFLTQTTTASNSAPK-ASRKFQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAH 60

Query: 61  KRERAASRKAFTSEILHLGSLQHSRPPPPPPT--TYHHLASPSTTALAPSA------LFD 120
           KRERAASRKAF SEILHLGSL    PP P  T  T+HHL  P T A AP+          
Sbjct: 61  KRERAASRKAFASEILHLGSL----PPQPTTTTMTHHHLPQPYTVAPAPTPTPAPADFLG 120

Query: 121 EHWFHQNNHYRGTTTT----ASASPNDLSPNADAAVEHVTIDLTLRL 155
           +HWF+QN++   TTTT    ASASP+ LSPN D AVEHVTIDLTLRL
Sbjct: 121 QHWFNQNHYSANTTTTTTASASASPDALSPNVDTAVEHVTIDLTLRL 162

[Close]

BLAST of CmoCh11G015840 vs. ExPASy TrEMBL
Match: A0A6J1DQT0 (zinc finger protein 6 OS=Momordica charantia OX=3673 GN=LOC111023386 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.0e-39
Identity = 99/155 (63.87%), Postives = 109/155 (70.32%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTT     PK  SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTTD---PK-PSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHW-FHQNN 120
           RERAASRK F S++LH         PPPPP        PS +    ++  DEHW     N
Sbjct: 61  RERAASRKPFHSDLLHFPPHHILNSPPPPP--------PSASPAMAASFLDEHWQLGHQN 120

Query: 121 HYRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 155
           H+R   ++AS   + LSPNAD AVE+VTIDLTLRL
Sbjct: 121 HHRAALSSASTPEDALSPNAD-AVENVTIDLTLRL 142

[Close]

BLAST of CmoCh11G015840 vs. NCBI nr
Match: XP_022928226.1 (protein LATE FLOWERING-like [Cucurbita moschata])

HSP 1 Score: 312.0 bits (798), Expect = 2.9e-81
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120
           RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 155
           YRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASPNDLSPNADAAVEHVTIDLTLRL 154

[Close]

BLAST of CmoCh11G015840 vs. NCBI nr
Match: KAG6588875.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.4 bits (781), Expect = 2.7e-79
Identity = 154/160 (96.25%), Postives = 154/160 (96.25%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120
           RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTT------ASASPNDLSPNADAAVEHVTIDLTLRL 155
           YRGTTTT      ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL 160

[Close]

BLAST of CmoCh11G015840 vs. NCBI nr
Match: XP_022989523.1 (protein LATE FLOWERING-like [Cucurbita maxima])

HSP 1 Score: 303.5 bits (776), Expect = 1.0e-78
Identity = 152/156 (97.44%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120
           RERAASRK FTSEILHLGSLQHSRPPPPPPTTYHHLASPS TALAPSALFDEHWFHQNNH
Sbjct: 61  RERAASRKVFTSEILHLGSLQHSRPPPPPPTTYHHLASPSATALAPSALFDEHWFHQNNH 120

Query: 121 YRGTTTT--ASASPNDLSPNADAAVEHVTIDLTLRL 155
           YRGTTTT  ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTASASASPNDLSPNADAAVEHVTIDLTLRL 156

[Close]

BLAST of CmoCh11G015840 vs. NCBI nr
Match: KAG7022634.1 (Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.8 bits (769), Expect = 6.6e-78
Identity = 154/161 (95.65%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSR-PPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNN 120
           RERAASRKAFTSEILHLGSLQHSR PPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNN
Sbjct: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNN 120

Query: 121 HYRGTTTT------ASASPNDLSPNADAAVEHVTIDLTLRL 155
           HYRGTTTT      ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 HYRGTTTTASASASASASPNDLSPNADAAVEHVTIDLTLRL 161

[Close]

BLAST of CmoCh11G015840 vs. NCBI nr
Match: XP_023530190.1 (zinc finger protein 7-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287.3 bits (734), Expect = 7.6e-74
Identity = 148/162 (91.36%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MADPAIYDFLSQTTASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60
           MADPAIYDFLSQT ASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK
Sbjct: 1   MADPAIYDFLSQTNASNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHK 60

Query: 61  RERAASRKAFTSEILHLGSLQHSRPPPPPPTTYHHLASPSTTALAPSALFDEHWFHQNNH 120
           RERAASRKAFTSEILHLGSL HSR PPPPPTTYHHLASPS TA APS LFDEHWFHQNNH
Sbjct: 61  RERAASRKAFTSEILHLGSLHHSR-PPPPPTTYHHLASPSATAPAPSPLFDEHWFHQNNH 120

Query: 121 YRGTTTT--------ASASPNDLSPNADAAVEHVTIDLTLRL 155
           YRGTTTT        ASASPNDLSPNADAAVEHVTIDLTLRL
Sbjct: 121 YRGTTTTVSASASASASASPNDLSPNADAAVEHVTIDLTLRL 161

[Close]

BLAST of CmoCh11G015840 vs. TAIR 10
Match: AT5G14010.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 16 SNSVPKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEIL 75
          + S  K  S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       
Sbjct: 17 TRSSSKRHSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR------- 76

Query: 76 HLGSLQHSRP 86
          +LG L +S P
Sbjct: 77 NLGVLANSPP 79

[Close]

BLAST of CmoCh11G015840 vs. TAIR 10
Match: AT5G48890.1 (C2H2-like zinc finger protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 40/92 (43.48%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 20  PKTTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTS-EILHLG 79
           P   + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A  + + ++  
Sbjct: 18  PSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAKRAYDFVNNN 77

Query: 80  SLQHSRPPPPPPTTYHHLASPSTTALAPSALF 111
              H+ P      + HHL      A A  A F
Sbjct: 78  DFLHTLPVFLSSPSQHHLTILGYPASASVACF 109

[Close]

BLAST of CmoCh11G015840 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0


Query: 26  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL--QHS 85
           KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A     +H+G +   H 
Sbjct: 48  KSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRA-----MHMGRMFGHHH 104

[Close]

BLAST of CmoCh11G015840 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 10  LSQTTASNSVPKTTSRKSQSQYS-SSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
           L+   +S S      ++ Q Q S S R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 57  LTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 116

[Close]

BLAST of CmoCh11G015840 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-09
Identity = 26/41 (63.41%), Postives = 32/41 (78.05%), Query Frame = 0


Query: 28 QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK 69
          Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Sbjct: 59 QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99

The following BLAST results are available for this feature:

BLAST of CmoCh11G015840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFX4	2.3e-12	57.14	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]
Q9FKA9	1.9e-11	43.48	Protein LATE FLOWERING OS=Arabidopsis thaliana OX=3702 GN=LATE PE=2 SV=1	[more]
Q39266	3.0e-09	51.61	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q42485	1.5e-08	63.41	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39263	1.5e-08	52.46	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]

BLAST of CmoCh11G015840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJQ6	1.4e-81	100.00	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111435120 PE=4 S...	[more]
A0A6J1JQI7	4.9e-79	97.44	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111486586 PE=4 SV=...	[more]
A0A6J1F843	3.0e-52	72.35	protein LATE FLOWERING-like OS=Cucurbita moschata OX=3662 GN=LOC111441721 PE=4 S...	[more]
A0A6J1J5R2	1.8e-49	71.26	protein LATE FLOWERING-like OS=Cucurbita maxima OX=3661 GN=LOC111481997 PE=4 SV=...	[more]
A0A6J1DQT0	5.0e-39	63.87	zinc finger protein 6 OS=Momordica charantia OX=3673 GN=LOC111023386 PE=4 SV=1	[more]

BLAST of CmoCh11G015840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928226.1	2.9e-81	100.00	protein LATE FLOWERING-like [Cucurbita moschata]	[more]
KAG6588875.1	2.7e-79	96.25	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022989523.1	1.0e-78	97.44	protein LATE FLOWERING-like [Cucurbita maxima]	[more]
KAG7022634.1	6.6e-78	95.65	Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_023530190.1	7.6e-74	91.36	zinc finger protein 7-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmoCh11G015840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14010.1	1.6e-13	57.14	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G48890.1	1.4e-12	43.48	C2H2-like zinc finger protein	[more]
AT1G24625.1	2.2e-10	51.61	zinc finger protein 7	[more]
AT1G66140.1	1.1e-09	52.46	zinc finger protein 4	[more]
AT1G80730.1	1.1e-09	63.41	zinc-finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 13..81 e-value: 5.0E-6 score: 28.2
None	No IPR available	PANTHER	PTHR45730:SF28	OS02G0182300 PROTEIN	coord: 17..154
None	No IPR available	PANTHER	PTHR45730	ZINC FINGER PROTEIN JAGGED	coord: 17..154
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 39..59
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 37..64 score: 10.595541
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 34..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015840.1	CmoCh11G015840.1	mRNA