CmoCh11G015410 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pectin lyase-like superfamily protein
Location	Cmo_Chr11: 11020396 .. 11022365 (+)
RNA-Seq Expression	CmoCh11G015410
Synteny	CmoCh11G015410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAACTTTCCCTTTTCTCTTCTCTTTATAATTATCATCTTCTTCCCACCATCATTGGGTGCTCGTACCTATAATGTTGTCAGTTTTGGAGCTAAGCCTGATGGCCGAACGGTGTCCACTGCCCCTTTTCTCAAGACATGGGCGTCTGCTTGTAACTCAGCTGCACCTTCTTCCATTTATGTTCCTAAGGGAAGGTTCCTACTCAAAGGCATTGTGTTCAAAGGCCCTTGTAAGAACCAAATCACATTCCGAATAGATGGCACGCTTGTGGCTCCCTCTGATTATCGTGGCCTTGAAGATTCGGATTCTTGGATTTTGTTCTCTAAAGTTAACAAAGTTTCTGTCGTTGGCGGTACTCTTGATGCGCAGGGTGCTAGTTATTGGGCGTGCAAGAAATCGGGGAAGAATTGCCCTGTTGGAGCTCCGGTATGTTATGACTCTGATATCATGTTAGTTTTTTTTTCTTTTTTCATCCAGTGATGTTAGAAATCACCACTCCTCTACAATGATATGATATTGCCCATTTTGAGGATAAACTCTTATGGCTTTCCTTTGGGCTTTCCCAAAAGGTCTCATACCAATGGAGATGTATTCCTTACTTATAAACTCATATCATTCCTTAAATGTGGGATTCCCTCCCAACAATTCTCAAGAATCCTCCTCTCGAACAAAGTACTCAAAGTATACTATAGAGCCTCCCTTGAGGCCTATGAACTCTCCAGCAGTCTCCTCTTAATCGAGGCTCGACTCCTTCTCTAGAGTCCTCGAACAAAGTACAACCTTTGTTCGACACTTGAGTCACTTTTGACTACACTTTCAAGTCTCACAACTTTTTTGTTCGACATTTGAGAATTCTATTGACATAACTAAGTTAAGAGTATGACTCTGATATTATGTTAGGAATCACGACTCTCCACAATGGCATGAGGCCTTTTAGGGAAGCCCAAAACAAATCCATGAGGAGCTTATGCTCAAAGTGGACAATATCATATAATTGTGGAGAATCGTGATTCCTAACATAAAATATCTTTACTTTTAGTTTTGAAAGGAACTCGTACAAACCTTTTAATTGTATTTTATTAATTTAGCTAAAAATAAGCGGGTTACTAAAATGTTGTACGTAATACAGTCGATGACATTCAATTGGGCAAACAACATCGTGATCAATGGATTAACGTCAATCAATAGCCGACAAACTCATCTCGTAATCAATGGCTGCAAGAAGGTGCTTGTTCAAAATGTGAAGGCAATAGCGCCGGACCAAAGCCCCAACACAGATGGAATTCACGTTCAAACTTCTACGGATGTTACAATCACTAGCAGTACGCTACAAACAGGAGACGATTGTGTATCAATCGGTGCAGGAACTTATAATTTGTTCATGAGTAATCTCAAATGTGGACCAGGCCATGGCGTAAGGTAAATAAACTTTGCTTAATTTTGACTTGAAGTTCCTTCTCTTGGAGGCTTCTATTTTGAATTCTAAGCGTAAAAAAAACCAAACATTTCTTTGGAACAGCATTGGAAGCTTGGGCAAGGAGCTCAACGAAGATGGAGTTCAAAACATAACCTTAAAGGACTCAATATTCACAGGGTCCGACAATGGCATAAGGATAAAAACATGGGCTAGACCAAGCAAAGGCTTTGTCAGGAACATCCTCTTCGACAACATTATCATGAACAATGCCAAAAATCCAATTGTAATCGATCAAAATTACTGTCCCGATAACAAAGGTTGTCCTAGACAGAGTTCGGGCGTACAAATCAGCAAAGTTACGTACCGAAATATTCGAGGAACATCAGCAACCCCAGAAGGTGTGAATTTCGATTGCAGTGTTACAAATCCATGCAAAGAGATAAAGCTACAAAACATAAAGCTTCTTTATAAGAACAAAGCAGCCATGTCGTCATGCAAGAATGTTCGTGGATCCGCTAATGTCATGTTGATGCCTCGGAGCTGCTTGTAG

mRNA sequence

ATGACCAACTTTCCCTTTTCTCTTCTCTTTATAATTATCATCTTCTTCCCACCATCATTGGGTGCTCGTACCTATAATGTTGTCAGTTTTGGAGCTAAGCCTGATGGCCGAACGGTGTCCACTGCCCCTTTTCTCAAGACATGGGCGTCTGCTTGTAACTCAGCTGCACCTTCTTCCATTTATGTTCCTAAGGGAAGGTTCCTACTCAAAGGCATTGTGTTCAAAGGCCCTTGTAAGAACCAAATCACATTCCGAATAGATGGCACGCTTGTGGCTCCCTCTGATTATCGTGGCCTTGAAGATTCGGATTCTTGGATTTTGTTCTCTAAAGTTAACAAAGTTTCTGTCGTTGGCGGTACTCTTGATGCGCAGGGTGCTAGTTATTGGGCGTGCAAGAAATCGGGGAAGAATTGCCCTGTTGGAGCTCCGTCGATGACATTCAATTGGGCAAACAACATCGTGATCAATGGATTAACGTCAATCAATAGCCGACAAACTCATCTCGTAATCAATGGCTGCAAGAAGGTGCTTGTTCAAAATGTGAAGGCAATAGCGCCGGACCAAAGCCCCAACACAGATGGAATTCACGTTCAAACTTCTACGGATGTTACAATCACTAGCAGTACGCTACAAACAGGAGACGATTGTGTATCAATCGGTGCAGGAACTTATAATTTGTTCATGAGTAATCTCAAATGTGGACCAGGCCATGGCGTAAGCATTGGAAGCTTGGGCAAGGAGCTCAACGAAGATGGAGTTCAAAACATAACCTTAAAGGACTCAATATTCACAGGGTCCGACAATGGCATAAGGATAAAAACATGGGCTAGACCAAGCAAAGGCTTTGTCAGGAACATCCTCTTCGACAACATTATCATGAACAATGCCAAAAATCCAATTGTAATCGATCAAAATTACTGTCCCGATAACAAAGGTTGTCCTAGACAGAGTTCGGGCGTACAAATCAGCAAAGTTACGTACCGAAATATTCGAGGAACATCAGCAACCCCAGAAGGTGTGAATTTCGATTGCAGTGTTACAAATCCATGCAAAGAGATAAAGCTACAAAACATAAAGCTTCTTTATAAGAACAAAGCAGCCATGTCGTCATGCAAGAATGTTCGTGGATCCGCTAATGTCATGTTGATGCCTCGGAGCTGCTTGTAG

Coding sequence (CDS)

ATGACCAACTTTCCCTTTTCTCTTCTCTTTATAATTATCATCTTCTTCCCACCATCATTGGGTGCTCGTACCTATAATGTTGTCAGTTTTGGAGCTAAGCCTGATGGCCGAACGGTGTCCACTGCCCCTTTTCTCAAGACATGGGCGTCTGCTTGTAACTCAGCTGCACCTTCTTCCATTTATGTTCCTAAGGGAAGGTTCCTACTCAAAGGCATTGTGTTCAAAGGCCCTTGTAAGAACCAAATCACATTCCGAATAGATGGCACGCTTGTGGCTCCCTCTGATTATCGTGGCCTTGAAGATTCGGATTCTTGGATTTTGTTCTCTAAAGTTAACAAAGTTTCTGTCGTTGGCGGTACTCTTGATGCGCAGGGTGCTAGTTATTGGGCGTGCAAGAAATCGGGGAAGAATTGCCCTGTTGGAGCTCCGTCGATGACATTCAATTGGGCAAACAACATCGTGATCAATGGATTAACGTCAATCAATAGCCGACAAACTCATCTCGTAATCAATGGCTGCAAGAAGGTGCTTGTTCAAAATGTGAAGGCAATAGCGCCGGACCAAAGCCCCAACACAGATGGAATTCACGTTCAAACTTCTACGGATGTTACAATCACTAGCAGTACGCTACAAACAGGAGACGATTGTGTATCAATCGGTGCAGGAACTTATAATTTGTTCATGAGTAATCTCAAATGTGGACCAGGCCATGGCGTAAGCATTGGAAGCTTGGGCAAGGAGCTCAACGAAGATGGAGTTCAAAACATAACCTTAAAGGACTCAATATTCACAGGGTCCGACAATGGCATAAGGATAAAAACATGGGCTAGACCAAGCAAAGGCTTTGTCAGGAACATCCTCTTCGACAACATTATCATGAACAATGCCAAAAATCCAATTGTAATCGATCAAAATTACTGTCCCGATAACAAAGGTTGTCCTAGACAGAGTTCGGGCGTACAAATCAGCAAAGTTACGTACCGAAATATTCGAGGAACATCAGCAACCCCAGAAGGTGTGAATTTCGATTGCAGTGTTACAAATCCATGCAAAGAGATAAAGCTACAAAACATAAAGCTTCTTTATAAGAACAAAGCAGCCATGTCGTCATGCAAGAATGTTCGTGGATCCGCTAATGTCATGTTGATGCCTCGGAGCTGCTTGTAG

Protein sequence

MTNFPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANVMLMPRSCL

Homology

[Close]

BLAST of CmoCh11G015410 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.8e-122
Identity = 220/387 (56.85%), Postives = 274/387 (70.80%), Query Frame = 0


Query: 4   FPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVP 63
           F  SL+F+ +I         TYNV S GAK DG+T ST  FL  WA AC S  P  IYVP
Sbjct: 8   FSLSLIFVFMI-NSAIASPLTYNVASLGAKADGKTDSTKAFLSAWAKACASMNPGVIYVP 67

Query: 64  KGRFLLKGIVFKGPCKNQ-ITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLD 123
            G F L+ +VF GPCKN  ITFRI GTLVAPSDYR + ++ +WI F  VN V++ GG LD
Sbjct: 68  AGTFFLRDVVFSGPCKNNAITFRIAGTLVAPSDYRVIGNAANWIFFHHVNGVTISGGILD 127

Query: 124 AQGASYWACKK-SGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNV 183
            QG + WACK   G++CP GA ++ F+ +NNIV++GL S+NS+  H+VIN  + V +Q V
Sbjct: 128 GQGTALWACKACHGESCPSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGV 187

Query: 184 KAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSI 243
           +      SPNTDGIHVQ S+ VTI +S + TGDDCVSIG GT NL++  + CGPGHG+SI
Sbjct: 188 RVSRSGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISI 247

Query: 244 GSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIV 303
           GSLGKE  E GVQN+T+K   F+G+ NG+RIK+W RPS GF RNILF +  M N +NPIV
Sbjct: 248 GSLGKEQEEAGVQNVTVKTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIV 307

Query: 304 IDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLL 363
           IDQ+YCPDNKGCP Q SGVQIS VTY +I GTSAT   V FDCS  +PC+EIKL+++KL 
Sbjct: 308 IDQHYCPDNKGCPGQVSGVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLT 367

Query: 364 YKNKAAMSSCKNVRGSANVMLMPRSCL 389
           YKN+AA SSC +  G+   ++ P SCL
Sbjct: 368 YKNQAAESSCSHADGTTEGVVQPTSCL 393

[Close]

BLAST of CmoCh11G015410 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.3e-101
Identity = 187/368 (50.82%), Postives = 247/368 (67.12%), Query Frame = 0


Query: 24  TYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPKGRFLLKGIVFKG-PCKN-Q 83
           T NV+S+GAKPDG   ST  FL  W  AC SA P++I VPKGRFL+  +VF G  CK   
Sbjct: 32  TLNVLSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAP 91

Query: 84  ITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLDAQGASYWACKKS-GKNCPV 143
           I+ RI G++VAP D+R +  S  WI F  V  VS+ GG LDAQG S W CK + G NCP 
Sbjct: 92  ISIRIAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPT 151

Query: 144 GAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAIAPDQSPNTDGIHVQTS 203
           GA S+ F+ +NNI I+GLTSINS++ H+VI+    V +  VK  A + SPNTDGIHV++S
Sbjct: 152 GAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESS 211

Query: 204 TDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSLGKELNEDGVQNITLKD 263
             V IT+S + TGDDC+SIG G+ N+F+  ++CGPGHG+SIGSLG+   E GV N+T+ +
Sbjct: 212 HSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSN 271

Query: 264 SIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQNYCPDNKGCPRQSSGV 323
             F G++NG+RIKTW + S  F RNI+F +I M   KNPI+IDQ+YC  +K CP+Q SGV
Sbjct: 272 VDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCL-HKPCPKQESGV 331

Query: 324 QISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANV 383
           ++S V Y +I GTS T   V  DCS   PC  I + ++ L+  ++ A +SC N  GSAN 
Sbjct: 332 KVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSAND 391

Query: 384 MLMPRSCL 389
           ++    CL
Sbjct: 392 VVPFTPCL 398

[Close]

BLAST of CmoCh11G015410 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 2.3e-77
Identity = 154/390 (39.49%), Postives = 236/390 (60.51%), Query Frame = 0


Query: 7   SLLFIIIIFFPPS-LGARTYNVVS-FGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPK 66
           S+  ++++F   S + +  ++VV+ FGAK DG+T  + PFL  W  AC S  PS++ +PK
Sbjct: 10  SMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPK 69

Query: 67  GRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTL-DA 126
           G +LL  +  +GPCK  I   + GT+ AP+D    +D  +W+ F  V    + GG + D 
Sbjct: 70  GTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKD-PNWVRFYSVENFKMFGGGIFDG 129

Query: 127 QGASYW---AC--KKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLV 186
           QG+  +    C  ++     PV   ++ F++  N +I  +TS +S+  H+ +  CK + +
Sbjct: 130 QGSIAYEKNTCENREFRSKLPV---NIRFDFLTNALIQDITSKDSKLFHINVFACKNITL 189

Query: 187 QNVKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHG 246
           + +K  APD+SPNTDGIH+  S  V I +S ++TGDDC+SIG GT N+ +  + CGPGHG
Sbjct: 190 ERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHG 249

Query: 247 VSIGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKN 306
           +SIGSLGK  NE+ V+ I + +   T + NG RIKTW     G V  I F++I MNN  +
Sbjct: 250 ISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSS 309

Query: 307 PIVIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNI 366
           PI+IDQ YCP NK    + S V++S ++++NIRGTSA PE + F CS ++PC+ ++L +I
Sbjct: 310 PILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADI 369

Query: 367 KLLYKN-KAAMSSCKNVRGSANVMLMPRSC 388
            + +   + A S C NV+   +  L P  C
Sbjct: 370 DIKHNGAEPATSQCLNVKPITSGKLNPIPC 395

[Close]

BLAST of CmoCh11G015410 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.6e-77
Identity = 154/390 (39.49%), Postives = 234/390 (60.00%), Query Frame = 0


Query: 7   SLLFIIIIFFPPS-LGARTYNVVS-FGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPK 66
           S+  ++++F   S +    ++VV+ FGAK DG+T  + PFL  W  AC S  PS++ +PK
Sbjct: 10  SMFVLLLLFISASKVQPDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPK 69

Query: 67  GRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTL-DA 126
           G +LL  +  +GPCK  I   + GT+ AP+D    +D  +W+ F  V    + GG + D 
Sbjct: 70  GTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKD-PNWVRFYSVENFKMFGGGIFDG 129

Query: 127 QGASYW---AC--KKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLV 186
           QG+  +    C  ++     PV   ++ F++  N +I  +TS +S+  H+ +  CK + +
Sbjct: 130 QGSIAYEKNTCENREFRSKLPV---NIRFDFVTNALIQDITSKDSKLFHINVFACKNITL 189

Query: 187 QNVKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHG 246
           + +K  APD+SPNTDGIH+  S  V I +S ++TGDDC+SIG GT N+ +  + CGPGHG
Sbjct: 190 ERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHG 249

Query: 247 VSIGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKN 306
           +SIGSLGK  NE+ V+ I + +   T + NG RIKTW     G V  I F++I MNN  +
Sbjct: 250 ISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSS 309

Query: 307 PIVIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNI 366
           PI+IDQ YCP NK    + S V++S ++++NIRGTSA PE + F CS ++PC+ ++L +I
Sbjct: 310 PILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNVELADI 369

Query: 367 KLLYKN-KAAMSSCKNVRGSANVMLMPRSC 388
            + +   + A S C NV+      L P  C
Sbjct: 370 DIQHNGAEPATSQCLNVKPITIGKLNPIPC 395

[Close]

BLAST of CmoCh11G015410 vs. ExPASy Swiss-Prot
Match: P48978 (Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 8.6e-77
Identity = 151/373 (40.48%), Postives = 231/373 (61.93%), Query Frame = 0


Query: 19  SLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPKGRFLLKGIVFKGPC 78
           S  A+T +V  FGAK +G    T  F+K W +AC+S+    + VP+  +L++ I F GPC
Sbjct: 93  SAPAKTISVDDFGAKGNGAD-DTQAFVKAWKAACSSSGAMVLVVPQKNYLVRPIEFSGPC 152

Query: 79  KNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVG-GTLDAQGASYW--ACK-KS 138
           K+Q+T +I GT+ A  D    +D D W++F  V  + VVG GT++  G  +W  +CK K 
Sbjct: 153 KSQLTLQIYGTIEASEDRSIYKDIDHWLIFDNVQNLLVVGPGTINGNGNIWWKNSCKIKP 212

Query: 139 GKNCPVGAP-SMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAIAPDQSPNTD 198
              C   AP ++TFN  NN+V+  L   +++Q H++   C  V    +   AP+ SPNTD
Sbjct: 213 QPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQASCLTVTAPEDSPNTD 272

Query: 199 GIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSLGKELNEDGV 258
           GIHV  + ++TI+SS + TGDDC+SI +G+  +  +++ CGPGHG+SIGSLG++ +ED V
Sbjct: 273 GIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDGSEDHV 332

Query: 259 QNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQNYCP-DNKG 318
             + +  +  +G+ NG+RIKTW +   G   NI+F N+ MN+  NPI+IDQNYC    K 
Sbjct: 333 SGVFVNGAKLSGTSNGLRIKTW-KGGSGSATNIVFQNVQMNDVTNPIIIDQNYCDHKTKD 392

Query: 319 CPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLYKNKAAMSSCK 378
           C +Q S VQ+  V Y+NIRGTSA+ + +  +CS + PC+ I LQ+++L    +   + C 
Sbjct: 393 CKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQL----QNGRAECN 452

Query: 379 NVRGSANVMLMPR 386
           NV+ +   ++ PR
Sbjct: 453 NVQPAYKGVVSPR 459

[Close]

BLAST of CmoCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1EID8 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434519 PE=3 SV=1)

HSP 1 Score: 789.6 bits (2038), Expect = 5.7e-225
Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0


Query: 1   MTNFPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSI 60
           MTNFPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSI
Sbjct: 1   MTNFPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSI 60

Query: 61  YVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGT 120
           YVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGT
Sbjct: 61  YVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGT 120

Query: 121 LDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQN 180
           LDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQN
Sbjct: 121 LDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQN 180

Query: 181 VKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVS 240
           VKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVS
Sbjct: 181 VKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVS 240

Query: 241 IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI 300
           IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI
Sbjct: 241 IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI 300

Query: 301 VIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKL 360
           VIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKL
Sbjct: 301 VIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKL 360

Query: 361 LYKNKAAMSSCKNVRGSANVMLMPRSCL 389
           LYKNKAAMSSCKNVRGSANVMLMPRSCL
Sbjct: 361 LYKNKAAMSSCKNVRGSANVMLMPRSCL 388

[Close]

BLAST of CmoCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1JPZ9 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486684 PE=3 SV=1)

HSP 1 Score: 752.3 bits (1941), Expect = 1.0e-213
Identity = 368/388 (94.85%), Postives = 377/388 (97.16%), Query Frame = 0


Query: 1   MTNFPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSI 60
           MTNFPFSLLFIIIIFFPP L A +YNVVSFGAKPDGRTVSTAPFLK WASACNSAAPSSI
Sbjct: 1   MTNFPFSLLFIIIIFFPPPLSALSYNVVSFGAKPDGRTVSTAPFLKAWASACNSAAPSSI 60

Query: 61  YVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGT 120
           YVPKGRFLLKGIVF+GPCKNQITFRIDGTLVAPSDYRGL +SDSWILFSKVNKV VVGGT
Sbjct: 61  YVPKGRFLLKGIVFRGPCKNQITFRIDGTLVAPSDYRGLGNSDSWILFSKVNKVFVVGGT 120

Query: 121 LDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQN 180
           LDA+GASYWACK+SGK+CPVGAPSMTFNWANNIVINGLTSINSRQTHLVIN CKKVLVQN
Sbjct: 121 LDARGASYWACKRSGKSCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINACKKVLVQN 180

Query: 181 VKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVS 240
           VKAIAPDQSPNTDGIHVQTS DVTITSSTLQTGDDCVSIGAGTYNLFM+NLKCGPGHGVS
Sbjct: 181 VKAIAPDQSPNTDGIHVQTSMDVTITSSTLQTGDDCVSIGAGTYNLFMTNLKCGPGHGVS 240

Query: 241 IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI 300
           IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI
Sbjct: 241 IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI 300

Query: 301 VIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKL 360
           VIDQNYCPDNKGCPRQSSG+QISKV YRNIRGTSATPEGVNFDCSVTNPC+EIKLQNIKL
Sbjct: 301 VIDQNYCPDNKGCPRQSSGIQISKVMYRNIRGTSATPEGVNFDCSVTNPCREIKLQNIKL 360

Query: 361 LYKNKAAMSSCKNVRGSANVMLMPRSCL 389
           LYKNKAAMSSCKNVR SAN MLMPRSCL
Sbjct: 361 LYKNKAAMSSCKNVRRSANAMLMPRSCL 388

[Close]

BLAST of CmoCh11G015410 vs. ExPASy TrEMBL
Match: A0A6J1EQ32 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434630 PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.3e-205
Identity = 349/388 (89.95%), Postives = 373/388 (96.13%), Query Frame = 0


Query: 1   MTNFPFSLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSI 60
           MTNFPFSLLFIIIIFFPPSL AR+YNVVSFGAKPDGRTVSTAPFLK WASACNSAAPSSI
Sbjct: 1   MTNFPFSLLFIIIIFFPPSLSARSYNVVSFGAKPDGRTVSTAPFLKAWASACNSAAPSSI 60

Query: 61  YVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGT 120
           YVPKGRFLLKGIVFKGPCKNQITFRIDGT+VAPSDYRGL +S+SWILFSKVNKVSVVGGT
Sbjct: 61  YVPKGRFLLKGIVFKGPCKNQITFRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGT 120

Query: 121 LDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQN 180
           LDA+GASYWACK+SGK+CPVGAPSMTFNWANNIVI+ LTSINS+QTHLVINGCKKVL+QN
Sbjct: 121 LDARGASYWACKRSGKSCPVGAPSMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQN 180

Query: 181 VKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVS 240
           VKAIAPDQSP+TDGIHVQ S+DVTIT STLQTGDDCVSIG GTYNLFM+NLKCGPGHG+S
Sbjct: 181 VKAIAPDQSPHTDGIHVQISSDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGIS 240

Query: 241 IGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPI 300
           IGSLGK+ NEDGVQNITLK+SIFT SDNGIRIKTWARPSKGFVRNILFDNIIMNN KNPI
Sbjct: 241 IGSLGKDFNEDGVQNITLKNSIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPI 300

Query: 301 VIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKL 360
           +IDQNYCPD+KGCPR++SG+QISKVTY+NIRGTS T + VNF+CSVTNPCKEIKLQNIKL
Sbjct: 301 IIDQNYCPDDKGCPRKNSGIQISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKL 360

Query: 361 LYKNKAAMSSCKNVRGSANVMLMPRSCL 389
           LYKNKAAMSSCKNVRGSAN  LMPRSCL
Sbjct: 361 LYKNKAAMSSCKNVRGSANAKLMPRSCL 388

[Close]

BLAST of CmoCh11G015410 vs. ExPASy TrEMBL
Match: A0A5A7T5V3 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00220 PE=3 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.4e-183
Identity = 321/392 (81.89%), Postives = 348/392 (88.78%), Query Frame = 0


Query: 1   MTNFPF----SLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAA 60
           M NFPF      L +I +FF  S  A  YNV+SFGAK + RT ST PFLK WASACNS  
Sbjct: 1   MANFPFFSTHFCLLLITLFFKAS-NAGNYNVLSFGAKGNERTDSTVPFLKAWASACNSPT 60

Query: 61  PSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSV 120
           PS+IYVPKGRFL+KGIVFKGPCKNQITFRIDGT+VAPSDYR L +SDSWILFSKVNKVSV
Sbjct: 61  PSTIYVPKGRFLIKGIVFKGPCKNQITFRIDGTVVAPSDYRALGNSDSWILFSKVNKVSV 120

Query: 121 VGGTLDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKV 180
           VGGTLD +GASYWACK SGKNCPVGAPSMTFNWANNIVI+GLTSINSRQTHLVINGC  V
Sbjct: 121 VGGTLDGKGASYWACKTSGKNCPVGAPSMTFNWANNIVISGLTSINSRQTHLVINGCNNV 180

Query: 181 LVQNVKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPG 240
           +VQNVKAIAPDQSPNTDGIHVQTS  VTI   TLQTGDDCVSIG GTYNLFM+NLKCGPG
Sbjct: 181 VVQNVKAIAPDQSPNTDGIHVQTSKGVTIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPG 240

Query: 241 HGVSIGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNA 300
           HGVSIGSLGKEL E GVQNITLK++IF+GSDNGIRIKTWARPSKGFVRNI+FDN+IMNN 
Sbjct: 241 HGVSIGSLGKELKEAGVQNITLKNAIFSGSDNGIRIKTWARPSKGFVRNIVFDNLIMNNV 300

Query: 301 KNPIVIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQ 360
           +NPIVIDQ+YCPDNKGCPRQ+SGVQISKVTYRNIRGTSAT E V+FDCS+TNPC +IKLQ
Sbjct: 301 ENPIVIDQHYCPDNKGCPRQNSGVQISKVTYRNIRGTSATLEAVSFDCSITNPCTDIKLQ 360

Query: 361 NIKLLYKNKAAMSSCKNVRGSANVMLMPRSCL 389
           +IKLLYKNKAA S CKNVRGS+  +LMPRSC+
Sbjct: 361 DIKLLYKNKAATSYCKNVRGSSTGILMPRSCM 391

[Close]

BLAST of CmoCh11G015410 vs. ExPASy TrEMBL
Match: A0A1S3CPW9 (polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103503343 PE=3 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 1.4e-183
Identity = 321/392 (81.89%), Postives = 348/392 (88.78%), Query Frame = 0


Query: 1   MTNFPF----SLLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAA 60
           M NFPF      L +I +FF  S  A  YNV+SFGAK + RT ST PFLK WASACNS  
Sbjct: 1   MANFPFFSTHFCLLLITLFFKAS-NAGNYNVLSFGAKGNERTDSTVPFLKAWASACNSPT 60

Query: 61  PSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSV 120
           PS+IYVPKGRFL+KGIVFKGPCKNQITFRIDGT+VAPSDYR L +SDSWILFSKVNKVSV
Sbjct: 61  PSTIYVPKGRFLIKGIVFKGPCKNQITFRIDGTVVAPSDYRALGNSDSWILFSKVNKVSV 120

Query: 121 VGGTLDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKV 180
           VGGTLD +GASYWACK SGKNCPVGAPSMTFNWANNIVI+GLTSINSRQTHLVINGC  V
Sbjct: 121 VGGTLDGKGASYWACKTSGKNCPVGAPSMTFNWANNIVISGLTSINSRQTHLVINGCNNV 180

Query: 181 LVQNVKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPG 240
           +VQNVKAIAPDQSPNTDGIHVQTS  VTI   TLQTGDDCVSIG GTYNLFM+NLKCGPG
Sbjct: 181 VVQNVKAIAPDQSPNTDGIHVQTSKGVTIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPG 240

Query: 241 HGVSIGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNA 300
           HGVSIGSLGKEL E GVQNITLK++IF+GSDNGIRIKTWARPSKGFVRNI+FDN+IMNN 
Sbjct: 241 HGVSIGSLGKELKEAGVQNITLKNAIFSGSDNGIRIKTWARPSKGFVRNIVFDNLIMNNV 300

Query: 301 KNPIVIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQ 360
           +NPIVIDQ+YCPDNKGCPRQ+SGVQISKVTYRNIRGTSAT E V+FDCS+TNPC +IKLQ
Sbjct: 301 ENPIVIDQHYCPDNKGCPRQNSGVQISKVTYRNIRGTSATLEAVSFDCSITNPCTDIKLQ 360

Query: 361 NIKLLYKNKAAMSSCKNVRGSANVMLMPRSCL 389
           +IKLLYKNKAA S CKNVRGS+  +LMPRSC+
Sbjct: 361 DIKLLYKNKAATSYCKNVRGSSTGILMPRSCM 391

[Close]

BLAST of CmoCh11G015410 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 525.4 bits (1352), Expect = 3.9e-149
Identity = 239/381 (62.73%), Postives = 306/381 (80.31%), Query Frame = 0


Query: 8   LLFIIIIFFPPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPKGRF 67
           + F   +    S  A  YNVVSFGAKPDGRT ST  FL  W +AC SAA  ++ VP+G F
Sbjct: 12  MFFSSFLLMKSSTAASNYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPRGSF 71

Query: 68  LLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLDAQGAS 127
           LLK + F+GPC+++ITF+I GT+VAPSDYRGL +S  WILF KVN++S++GGTLDA+GAS
Sbjct: 72  LLKPVEFRGPCRSRITFQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDARGAS 131

Query: 128 YWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAIAPD 187
           +WAC+KSGK+CPVGA SMTFNWAN++V++GLTSINS+ THLVIN C  V+V+ VK +APD
Sbjct: 132 FWACRKSGKSCPVGARSMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKLVAPD 191

Query: 188 QSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSLGKE 247
           QSPNTDG+HVQ S  VT+T  T  TGDDC+SIG GT NL+MS L CGPGHG+SIGSLG++
Sbjct: 192 QSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRD 251

Query: 248 LNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQNYC 307
            NE GV+NITL +S+F+GSDNG+RIKTWAR S GFVRN+LF N+IM N +NPI++DQNYC
Sbjct: 252 ANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQNYC 311

Query: 308 PDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLYKNKAA 367
           P N+GCP+Q SGV+IS+V YRNI+GTS T + + FDCS +NPC+ I+L +IKL +  ++A
Sbjct: 312 PSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNGRSA 371

Query: 368 MSSCKNVRGSANVMLMPRSCL 389
            S+CKN++G    ++MP+ CL
Sbjct: 372 TSTCKNIKGVKAGVVMPQGCL 392

[Close]

BLAST of CmoCh11G015410 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 471.9 bits (1213), Expect = 5.1e-133
Identity = 224/385 (58.18%), Postives = 289/385 (75.06%), Query Frame = 0


Query: 6   FSLLFIIIIFFPPSLGAR-TYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPK 65
           F L+F ++ F   S  A   +NVVSFGAKPDG T STA FLK W  AC SAA +++ VP 
Sbjct: 8   FPLIFTLLTFIDVSSSASIVFNVVSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPT 67

Query: 66  GRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLDAQ 125
           G FLLK I F GPCK++ITF++ GT+VAP DYR   +S SWILF+KVN+ S+VGGT DA+
Sbjct: 68  GTFLLKVITFGGPCKSKITFQVTGTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTFDAR 127

Query: 126 GASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAI 185
           G+ +W+C+KSG+NCP G  S++FN A +++I+G+ S+NS+ +H+ +NGC  V V+N++ +
Sbjct: 128 GSGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLV 187

Query: 186 APDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSL 245
           AP  SPNTDG  VQ ST VT+T ST+QTGDDCV+IG GT N  +S L CGPGHGVSIGSL
Sbjct: 188 APGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSL 247

Query: 246 GKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQ 305
            K+LNEDGV+N+T+  S+FTGS NG+RIK+WARPS GFVRN+ F N+IM N +NPI+IDQ
Sbjct: 248 AKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIIIDQ 307

Query: 306 NYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLY-K 365
           NYCP N+GCP + SGV+I++VTY+NI+GTSAT E +   CS +NPC  I LQ+IKL Y K
Sbjct: 308 NYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYNK 367

Query: 366 NKAAMSSCKNVRGSANVMLMPRSCL 389
              A S C N  G    ++ P SCL
Sbjct: 368 GTPATSLCFNAVGKNLGVIQPTSCL 392

[Close]

BLAST of CmoCh11G015410 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 468.4 bits (1204), Expect = 5.6e-132
Identity = 222/385 (57.66%), Postives = 289/385 (75.06%), Query Frame = 0


Query: 6   FSLLFIIIIFFPPSLGA-RTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPK 65
           FSLLF ++ F   S+ A   +NVVSFGAKPDG T ST  FLK W  AC SA+ +++ VPK
Sbjct: 8   FSLLFTLLTFIDVSISASNVFNVVSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPK 67

Query: 66  GRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLDAQ 125
           G FLLK I F GPCK++ITF++ GT++AP DYR   +S  WILF+KVN+ S+VGGT DA+
Sbjct: 68  GTFLLKVITFGGPCKSKITFQVAGTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDAR 127

Query: 126 GASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAI 185
              +W+C+KSG+NCP G  S++FN A +++I+G+ S+NS+ TH+ +NGC  V+V+NVK +
Sbjct: 128 ANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLV 187

Query: 186 APDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSL 245
           AP  SPNTDG HVQ ST VT T ST+QTGDDCV+IG GT NL ++ L CGPGHGVSIGSL
Sbjct: 188 APGNSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSL 247

Query: 246 GKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQ 305
            KEL EDGV+N+T+  S+FTGS NG+RIK+WARPS GFVR + F +++M N +NPI+IDQ
Sbjct: 248 AKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQ 307

Query: 306 NYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLY-K 365
           NYCP ++GCP + SGV+IS+VTY+NI+GTSAT E +   CS ++PC  I LQ+IKL Y K
Sbjct: 308 NYCPTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNK 367

Query: 366 NKAAMSSCKNVRGSANVMLMPRSCL 389
              A S C N  G +  ++ P SCL
Sbjct: 368 GTPATSFCFNAVGKSLGVIQPTSCL 392

[Close]

BLAST of CmoCh11G015410 vs. TAIR 10
Match: AT2G43880.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-126
Identity = 203/389 (52.19%), Postives = 292/389 (75.06%), Query Frame = 0


Query: 3   NFPFSLLFIII-IFF--PPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSS 62
           +FP +++F  I IFF    S    ++NV  +GA+ DGR  +T  FL  W+ AC S A + 
Sbjct: 6   SFPCAIIFFSINIFFLIKSSHAMPSFNVQRYGARGDGRADATKSFLTAWSLACGSRARAM 65

Query: 63  IYVPKGRFLLKGIVFKGPCKNQITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGG 122
           +YVP+G +L+K +VF GPCKN ITF+ DGTLVAP++Y  + +S  WILF+KVN++SV GG
Sbjct: 66  VYVPRGTYLVKNLVFWGPCKNIITFKNDGTLVAPANYWDIGNSGYWILFAKVNRISVYGG 125

Query: 123 TLDAQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQ 182
           T+DA+GA YW+C+K G +CP GA S++F+W NN++++GL+S NS+  H+ ++    V ++
Sbjct: 126 TIDARGAGYWSCRKKGSHCPQGARSISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIE 185

Query: 183 NVKAIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGV 242
           NV+  AP  SPNTDGIHVQ+S+ VTI+  T+ TGDDC+++  G+ N+++  + CGPGHG+
Sbjct: 186 NVRIRAPSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGI 245

Query: 243 SIGSLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNP 302
           SIGSLG   NE+GVQN+T+  S+FT + NG+RIKTWARPS+GFV N++F N+IMNN +NP
Sbjct: 246 SIGSLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENP 305

Query: 303 IVIDQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIK 362
           ++IDQNYCP+ KGCPRQSSGV+IS VT+ NI+GTS TP  +  DCS +N C  ++LQ+IK
Sbjct: 306 VIIDQNYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIK 365

Query: 363 LLYKNKAAMSSCKNVRGSANVMLMPRSCL 389
           L Y  +++ S C+N  G A+ +++PR+C+
Sbjct: 366 LTYMRRSSASYCRNAHGRASGVMVPRNCM 394

[Close]

BLAST of CmoCh11G015410 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 446.0 bits (1146), Expect = 3.0e-125
Identity = 219/386 (56.74%), Postives = 277/386 (71.76%), Query Frame = 0


Query: 7   SLLFIIIIFF--PPSLGARTYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPK 66
           S L I+++F     S  A+TYN++S+GAKPDG+T ST  F   WA AC S  P +I VPK
Sbjct: 3   SSLLIVLLFLLSVSSSSAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPK 62

Query: 67  GRFLLKGIVFKG-PCKNQ-ITFRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLD 126
           GRFLL+ I+F G  CK + +TFRI GTLVAPSDYR +   + WILF  ++ +SV GG LD
Sbjct: 63  GRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLD 122

Query: 127 AQGASYWACKKSGKNCPVGAPSMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVK 186
           AQGAS W+CKKSGKNCP GA S+ F  + N+VI+GLTS+NS+  H+ INGC  V +  VK
Sbjct: 123 AQGASLWSCKKSGKNCPSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVK 182

Query: 187 AIAPDQSPNTDGIHVQTSTDVTITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIG 246
             A   SPNTDGIHVQ+S+ V+I +S + TGDDCVSIG GT  L++ N+ CGPGHG+SIG
Sbjct: 183 VSADGNSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIG 242

Query: 247 SLGKELNEDGVQNITLKDSIFTGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVI 306
           SLGKE  E GVQNIT+K + FTG++NG+RIK+WARPS GF +NI F + +MNN +NPIVI
Sbjct: 243 SLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVI 302

Query: 307 DQNYCPDNKGCPRQSSGVQISKVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLY 366
           DQNYCP N+ CP Q SG++IS V + +I GTSAT  GV  DCS   PC  I++Q++KL Y
Sbjct: 303 DQNYCPGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTY 362

Query: 367 KNKAAMSSCKNVRGSANVMLMPRSCL 389
           +NK A + C +  GS      P SCL
Sbjct: 363 RNKPATTDCSHAGGSEAGFQRPNSCL 388

The following BLAST results are available for this feature:

BLAST of CmoCh11G015410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	1.8e-122	56.85	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	1.3e-101	50.82	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q39786	2.3e-77	39.49	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	8.6e-77	39.49	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
P48978	8.6e-77	40.48	Polygalacturonase OS=Malus domestica OX=3750 PE=2 SV=1	[more]

BLAST of CmoCh11G015410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EID8	5.7e-225	100.00	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434519 PE=3 SV=1	[more]
A0A6J1JPZ9	1.0e-213	94.85	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486684 PE=3 SV=1	[more]
A0A6J1EQ32	2.3e-205	89.95	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434630 PE=3 SV=1	[more]
A0A5A7T5V3	1.4e-183	81.89	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CPW9	1.4e-183	81.89	polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103503343 PE=3 SV=1	[more]

BLAST of CmoCh11G015410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43890.1	3.9e-149	62.73	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	5.1e-133	58.18	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	5.6e-132	57.66	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	1.2e-126	52.19	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	3.0e-125	56.74	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 173..199 e-value: 1300.0 score: 6.5 coord: 200..221 e-value: 210.0 score: 10.7 coord: 283..304 e-value: 3300.0 score: 3.5 coord: 317..344 e-value: 1500.0 score: 6.0 coord: 253..274 e-value: 2.7 score: 17.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 18..386 e-value: 8.8E-114 score: 382.6
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 52..375 e-value: 9.7E-90 score: 300.9
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 230..243
None	No IPR available	PANTHER	PTHR31375:SF31	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 10..387
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 10..387
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 9..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015410.1	CmoCh11G015410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity