CmoCh11G015370 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015370
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	Pectin lyase-like superfamily protein
Location	Cmo_Chr11: 10989287 .. 10991583 (-)
RNA-Seq Expression	CmoCh11G015370
Synteny	CmoCh11G015370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCCAAGGAATCCCATGAAAGCTTAGAGTAATGATTTGAAACAAAACGTACATACCATACAATAAAGACATGTTCATAATGTACGCCATGTTACGTTCATGCATCCATTTTGACCCTAAACCCTTGTGCTTCTAACATGTACGCCACATGCATCTCTTTTGACTTTTCAATTTTGCTTCTTTTGTTCATCAAACCTCATACATTATATAAACCCCATTTCCTTACACAAACATATCATAAACAAAATGACCAACTTTCCCTTCTCTCTTCTCTTTATAATTATCATCTTCTTCCCACCATCATTGAGTGCTCGTAGCTATAATGTTGTCAGTTTTGGAGCTAAGCCTGATGGCCGAACGGTGTCCACTGCCCCTTTTCTCAAGGCTTGGGCGTCTGCTTGTAACTCGGCTGCACCTTCTTCCATTTATGTTCCTAAGGGAAGGTTCCTACTCAAAGGCATTGTGTTCAAAGGCCCTTGTAAGAACCAAATCACATTCCGAATAGATGGCACTATTGTCGCTCCCTCGGATTATCGTGGCCTTGGAAACTCGAATTCTTGGATTTTGTTCTCTAAAGTTAACAAAGTTTCTGTCGTCGGCGGTACTCTTGATGCGCGAGGTGCAAGTTATTGGGCGTGCAAGAGATCTGGGAAGAGTTGCCCTGTTGGAGCTCCGGTATGTTACACTATTGAATTTGAAAACAAGAATTTTCAAATTTCTTAAGCTTTTGATGTTTTTTTTCTTATGGGTTGTTGAGGATTGTTGGGAGGGAGTTCTACCTTCCCTAATTTAAGGAATGATCGTGAGTTTATAAGTAAGGAATTATTCATGAGAGGTTATGCTCAAAGTGGATCATATCATACCATTGTGGATACTCGTTATTTCTAACATGATATCAGAGTCATGCTCTTAACTTAGTCATGTCAATAAAATTCTCAAATGTTGAACAAAGAAGTTGTGAGCCTCGAAAGTGTAGTCAAAAGTGACTTAAGTGTTGAATAATGGGTGTACTTTGTTCGAGGACTCTTGATAAGGAGTCGAGCCTCGATTAAGGGGAAGCTGTTCGAGGGTTCCATAGGCCTTAGGAAAAACTCTATAGTGTACTTTGTTCGAGGGGAAGATTTTTGGAAGGGAATCCCACATTGGCTAATTTAGGGAATGTTAGGGGTTTATAAGTAAGAAATACTTCTCCATTGGTATGAGACCTTTTAGGGATGCCAAAAGCAAGCCATGAGAGGTTATACTCAAAGTAGACAATAAATATCATACTATTGTGGAAAGTCGTTACCGTAACATGGATTACGATAAGTTTAAATCATCGTAATCTATACATGCAGTTTGTCTTACAAAAATTTAAATTACTTTTAATTTTGAAAGGAAACCATACCATTAGTCAAAGATATTTTTATGAATTTAGCCAAAAGTAAACGGGTTACTAAAATATTGTAAGTAATGCAGTCAATGACATTCAATTGGGCCAACAACATCGTGATCAGTAGATTAACGTCGATCAATAGCCAACAAACTCATCTCGTAATCAATGGCTGCAAGAAGGTGCTTATTCAAAACGTGAAGGCAATAGCTCCCGATCAAAGCCCCCACACAGATGGAATTCACGTTCAAATTTCTAGCGATGTTACAATCACAGATAGTACACTACAAACAGGAGACGATTGTGTATCAATTGGTCCAGGAACTTATAATTTGTTCATGACTAATCTCAAATGTGGACCAGGCCATGGCATAAGGTAAATAAACTTTGCTCAATTTTGATTTGAAGTTCCTTCTTTTGGAGGCTTCTATTTTGAATTCTAACCGTAAAAAGAACCAAACATTTCTTTGGAACAGCATTGGAAGCTTGGGCAAGGACTTCAACGAAGATGGAGTTCAAAACATAACCTTAAAGAACTCAATATTCACACGGTCGGACAATGGCATAAGGATAAAAACATGGGCTAGACCAAGCAAAGGCTTTGTCCGGAACATCCTCTTCGACAACATTATCATGAACAATGTCAAAAATCCAATCATAATCGACCAAAATTATTGCCCCGACGACAAAGGTTGTCCTAGAAAGAATTCGGGCATACAAATCAGCAAAGTTACGTACAAAAATATTCGAGGAACATCAACAACACAAAAAGCTGTGAATTTCGAATGCAGCGTTACCAATCCATGCAAAGAGATAAAGCTACAAAACATAAAGCTTCTTTATAAGAACAAAGCAGCCATGTCGTCATGCAAGAACGTTCGTGGATCCGCTAATGCAAAATTGATGCCTCGGAGCTGCTTATAG

mRNA sequence

TTTTCCAAGGAATCCCATGAAAGCTTAGATTTTGGAGCTAAGCCTGATGGCCGAACGGTGTCCACTGCCCCTTTTCTCAAGGCTTGGGCGTCTGCTTGTAACTCGGCTGCACCTTCTTCCATTTATGTTCCTAAGGGAAGGTTCCTACTCAAAGGCATTGTGTTCAAAGGCCCTTGTAAGAACCAAATCACATTCCGAATAGATGGCACTATTGTCGCTCCCTCGGATTATCGTGGCCTTGGAAACTCGAATTCTTGGATTTTGTTCTCTAAAGTTAACAAAGTTTCTGTCGTCGGCGGTACTCTTGATGCGCGAGGTGCAAGTTATTGGGCGTGCAAGAGATCTGGGAAGAGTTGCCCTGTTGGAGCTCCGTCAATGACATTCAATTGGGCCAACAACATCGTGATCAGTAGATTAACGTCGATCAATAGCCAACAAACTCATCTCGTAATCAATGGCTGCAAGAAGGTGCTTATTCAAAACGTGAAGGCAATAGCTCCCGATCAAAGCCCCCACACAGATGGAATTCACGTTCAAATTTCTAGCGATGTTACAATCACAGATAGTACACTACAAACAGGAGACGATTGTGTATCAATTGGTCCAGGAACTTATAATTTGTTCATGACTAATCTCAAATGTGGACCAGGCCATGGCATAAGCATTGGAAGCTTGGGCAAGGACTTCAACGAAGATGGAGTTCAAAACATAACCTTAAAGAACTCAATATTCACACGGTCGGACAATGGCATAAGGATAAAAACATGGGCTAGACCAAGCAAAGGCTTTGTCCGGAACATCCTCTTCGACAACATTATCATGAACAATGTCAAAAATCCAATCATAATCGACCAAAATTATTGCCCCGACGACAAAGGTTGTCCTAGAAAGAATTCGGGCATACAAATCAGCAAAGTTACGTACAAAAATATTCGAGGAACATCAACAACACAAAAAGCTGTGAATTTCGAATGCAGCGTTACCAATCCATGCAAAGAGATAAAGCTACAAAACATAAAGCTTCTTTATAAGAACAAAGCAGCCATGTCGTCATGCAAGAACGTTCGTGGATCCGCTAATGCAAAATTGATGCCTCGGAGCTGCTTATAG

Coding sequence (CDS)

TTTTCCAAGGAATCCCATGAAAGCTTAGATTTTGGAGCTAAGCCTGATGGCCGAACGGTGTCCACTGCCCCTTTTCTCAAGGCTTGGGCGTCTGCTTGTAACTCGGCTGCACCTTCTTCCATTTATGTTCCTAAGGGAAGGTTCCTACTCAAAGGCATTGTGTTCAAAGGCCCTTGTAAGAACCAAATCACATTCCGAATAGATGGCACTATTGTCGCTCCCTCGGATTATCGTGGCCTTGGAAACTCGAATTCTTGGATTTTGTTCTCTAAAGTTAACAAAGTTTCTGTCGTCGGCGGTACTCTTGATGCGCGAGGTGCAAGTTATTGGGCGTGCAAGAGATCTGGGAAGAGTTGCCCTGTTGGAGCTCCGTCAATGACATTCAATTGGGCCAACAACATCGTGATCAGTAGATTAACGTCGATCAATAGCCAACAAACTCATCTCGTAATCAATGGCTGCAAGAAGGTGCTTATTCAAAACGTGAAGGCAATAGCTCCCGATCAAAGCCCCCACACAGATGGAATTCACGTTCAAATTTCTAGCGATGTTACAATCACAGATAGTACACTACAAACAGGAGACGATTGTGTATCAATTGGTCCAGGAACTTATAATTTGTTCATGACTAATCTCAAATGTGGACCAGGCCATGGCATAAGCATTGGAAGCTTGGGCAAGGACTTCAACGAAGATGGAGTTCAAAACATAACCTTAAAGAACTCAATATTCACACGGTCGGACAATGGCATAAGGATAAAAACATGGGCTAGACCAAGCAAAGGCTTTGTCCGGAACATCCTCTTCGACAACATTATCATGAACAATGTCAAAAATCCAATCATAATCGACCAAAATTATTGCCCCGACGACAAAGGTTGTCCTAGAAAGAATTCGGGCATACAAATCAGCAAAGTTACGTACAAAAATATTCGAGGAACATCAACAACACAAAAAGCTGTGAATTTCGAATGCAGCGTTACCAATCCATGCAAAGAGATAAAGCTACAAAACATAAAGCTTCTTTATAAGAACAAAGCAGCCATGTCGTCATGCAAGAACGTTCGTGGATCCGCTAATGCAAAATTGATGCCTCGGAGCTGCTTATAG

Protein sequence

FSKESHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAPSMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLMPRSCL

Homology

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BLAST of CmoCh11G015370 vs. ExPASy Swiss-Prot
Match: P48979 (Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-119
Identity = 209/360 (58.06%), Postives = 265/360 (73.61%), Query Frame = 0


Query: 12  GAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQ-ITFRIDGT 71
           GAK DG+T ST  FL AWA AC S  P  IYVP G F L+ +VF GPCKN  ITFRI GT
Sbjct: 34  GAKADGKTDSTKAFLSAWAKACASMNPGVIYVPAGTFFLRDVVFSGPCKNNAITFRIAGT 93

Query: 72  IVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKR-SGKSCPVGAPSMTFN 131
           +VAPSDYR +GN+ +WI F  VN V++ GG LD +G + WACK   G+SCP GA ++ F+
Sbjct: 94  LVAPSDYRVIGNAANWIFFHHVNGVTISGGILDGQGTALWACKACHGESCPSGATTLGFS 153

Query: 132 WANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDVTITDS 191
            +NNIV+S L S+NSQ  H+VIN  + V +Q V+      SP+TDGIHVQ+SS VTI +S
Sbjct: 154 DSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQMSSGVTILNS 213

Query: 192 TLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIFTRSDN 251
            + TGDDCVSIGPGT NL++  + CGPGHGISIGSLGK+  E GVQN+T+K   F+ + N
Sbjct: 214 KIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTVTFSGTQN 273

Query: 252 GIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQISKVTYK 311
           G+RIK+W RPS GF RNILF +  M NV+NPI+IDQ+YCPD+KGCP + SG+QIS VTY+
Sbjct: 274 GLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVSGVQISDVTYE 333

Query: 312 NIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLMPRSCL 370
           +I GTS T+ AV F+CS  +PC+EIKL+++KL YKN+AA SSC +  G+    + P SCL
Sbjct: 334 DIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTYKNQAAESSCSHADGTTEGVVQPTSCL 393

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BLAST of CmoCh11G015370 vs. ExPASy Swiss-Prot
Match: O22818 (Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g43860 PE=2 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 1.2e-99
Identity = 187/364 (51.37%), Postives = 245/364 (67.31%), Query Frame = 0


Query: 9   LDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKG-PCKN-QITFR 68
           L +GAKPDG   ST  FL AW  AC SA P++I VPKGRFL+  +VF G  CK   I+ R
Sbjct: 36  LSYGAKPDGSKDSTKAFLAAWDVACASANPTTIIVPKGRFLVGNLVFHGNECKQAPISIR 95

Query: 69  IDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRS-GKSCPVGAPS 128
           I G+IVAP D+R + +S  WI F  V  VS+ GG LDA+G S W CK + G +CP GA S
Sbjct: 96  IAGSIVAPEDFRIIASSKHWIWFEDVTDVSIYGGILDAQGTSLWKCKNNGGHNCPTGAKS 155

Query: 129 MTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDVT 188
           + F+ +NNI IS LTSINSQ+ H+VI+    V I  VK  A + SP+TDGIHV+ S  V 
Sbjct: 156 LVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSVH 215

Query: 189 ITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIFT 248
           IT+S + TGDDC+SIGPG+ N+F+  ++CGPGHGISIGSLG+   E GV N+T+ N  F 
Sbjct: 216 ITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDFM 275

Query: 249 RSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQISK 308
            ++NG+RIKTW + S  F RNI+F +I M  VKNPIIIDQ+YC   K CP++ SG+++S 
Sbjct: 276 GTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCL-HKPCPKQESGVKVSN 335

Query: 309 VTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLMP 368
           V Y++I GTS T+ AV  +CS   PC  I + ++ L+  ++ A +SC N  GSAN  +  
Sbjct: 336 VRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLVSVHRPAQASCDNANGSANDVVPF 395

Query: 369 RSCL 370
             CL
Sbjct: 396 TPCL 398

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BLAST of CmoCh11G015370 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 9.1e-76
Identity = 150/365 (41.10%), Postives = 220/365 (60.27%), Query Frame = 0


Query: 11  FGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGT 70
           FGAK DG+T  + PFL AW  AC S  PS++ +PKG +LL  +  +GPCK  I   + GT
Sbjct: 35  FGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGT 94

Query: 71  IVAPSDYRGLGNSNSWILFSKVNKVSVVGGTL-DARGASYW---AC--KRSGKSCPVGAP 130
           I AP+D     + N W+ F  V    + GG + D +G+  +    C  +      PV   
Sbjct: 95  IQAPADPSAFKDPN-WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPV--- 154

Query: 131 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 190
           ++ F++  N +I  +TS +S+  H+ +  CK + ++ +K  APD+SP+TDGIH+  S  V
Sbjct: 155 NIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 214

Query: 191 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 250
            I  S ++TGDDC+SIG GT N+ +  + CGPGHGISIGSLGK  NE+ V+ I + N   
Sbjct: 215 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 274

Query: 251 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 310
           T + NG RIKTW     G V  I F++I MNNV +PI+IDQ YCP +K    + S +++S
Sbjct: 275 TNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 334

Query: 311 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKN-KAAMSSCKNVRGSANAKL 369
            +++KNIRGTS   +A+ F CS ++PC+ ++L +I + +   + A S C NV+   + KL
Sbjct: 335 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEPATSQCLNVKPITSGKL 394

[Close]

BLAST of CmoCh11G015370 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-75
Identity = 150/365 (41.10%), Postives = 219/365 (60.00%), Query Frame = 0


Query: 11  FGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGT 70
           FGAK DG+T  + PFL AW  AC S  PS++ +PKG +LL  +  +GPCK  I   + GT
Sbjct: 35  FGAKADGKTDLSKPFLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGT 94

Query: 71  IVAPSDYRGLGNSNSWILFSKVNKVSVVGGTL-DARGASYW---AC--KRSGKSCPVGAP 130
           I AP+D     + N W+ F  V    + GG + D +G+  +    C  +      PV   
Sbjct: 95  IQAPADPSAFKDPN-WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPV--- 154

Query: 131 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 190
           ++ F++  N +I  +TS +S+  H+ +  CK + ++ +K  APD+SP+TDGIH+  S  V
Sbjct: 155 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 214

Query: 191 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 250
            I  S ++TGDDC+SIG GT N+ +  + CGPGHGISIGSLGK  NE+ V+ I + N   
Sbjct: 215 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 274

Query: 251 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 310
           T + NG RIKTW     G V  I F++I MNNV +PI+IDQ YCP +K    + S +++S
Sbjct: 275 TNTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLS 334

Query: 311 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKN-KAAMSSCKNVRGSANAKL 369
            +++KNIRGTS   +A+ F CS ++PC+ ++L +I + +   + A S C NV+     KL
Sbjct: 335 NISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIQHNGAEPATSQCLNVKPITIGKL 394

[Close]

BLAST of CmoCh11G015370 vs. ExPASy Swiss-Prot
Match: Q9SFB7 (Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-75
Identity = 159/366 (43.44%), Postives = 223/366 (60.93%), Query Frame = 0


Query: 11  FGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGR-FLLKGIVFKGPCKNQ-ITFRID 70
           FGAK +G   S A F+KAW +AC+S     I  PK R ++LK + F GPCK+  I F+I 
Sbjct: 76  FGAKANGNDDSKA-FMKAWEAACSSTGIVYIVAPKNRDYMLKAVTFSGPCKSSLIIFKIY 135

Query: 71  GTIVA---PSDYRGLGNSNSWILFSKVNKVSVV-GGTLDARGASYW--ACKRSGKSCPVG 130
           G I A   PSDY+       WI+F  VN + V  GG +D  G  +W  +CK + +   +G
Sbjct: 136 GRIEAWENPSDYK---ERRHWIVFENVNNLRVEGGGRIDGNGHIWWPKSCKINPQLPCLG 195

Query: 131 AP-SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQIS 190
           AP ++TF   NN+ +S +   N+QQ HL    CK V   N+   +P  SP+TDGIHV  +
Sbjct: 196 APTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSGT 255

Query: 191 SDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKN 250
            ++ I DS ++TGDDC+SI  G+ N+  T + CGPGHGISIGSLG+D +E  V N+ +  
Sbjct: 256 QNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVNK 315

Query: 251 SIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGI 310
           +    + NG+RIKTW +   G  +NI+F +IIM NV NPIII+Q+YC   + CP + S +
Sbjct: 316 ATLIGTTNGVRIKTW-QGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAV 375

Query: 311 QISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMS--SCKNVRGSA 366
           Q+S V YKNI+GTS+   AV F CS   PC+ I +QN+KL+ + +  +S  SC NV+   
Sbjct: 376 QVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVDQTQQDVSKASCSNVKLDT 435

[Close]

BLAST of CmoCh11G015370 vs. ExPASy TrEMBL
Match: A0A6J1EQ32 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434630 PE=3 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.2e-209
Identity = 361/368 (98.10%), Postives = 363/368 (98.64%), Query Frame = 0


Query: 2   SKESHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKN 61
           S  S+  + FGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKN
Sbjct: 21  SARSYNVVSFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKN 80

Query: 62  QITFRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPV 121
           QITFRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPV
Sbjct: 81  QITFRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPV 140

Query: 122 GAPSMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQIS 181
           GAPSMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQIS
Sbjct: 141 GAPSMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQIS 200

Query: 182 SDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKN 241
           SDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKN
Sbjct: 201 SDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKN 260

Query: 242 SIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGI 301
           SIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGI
Sbjct: 261 SIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGI 320

Query: 302 QISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANA 361
           QISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANA
Sbjct: 321 QISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANA 380

Query: 362 KLMPRSCL 370
           KLMPRSCL
Sbjct: 381 KLMPRSCL 388

[Close]

BLAST of CmoCh11G015370 vs. ExPASy TrEMBL
Match: A0A6J1JPZ9 (polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486684 PE=3 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190
Identity = 326/365 (89.32%), Postives = 346/365 (94.79%), Query Frame = 0


Query: 5   SHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT 64
           S+  + FGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVF+GPCKNQIT
Sbjct: 24  SYNVVSFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFRGPCKNQIT 83

Query: 65  FRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAP 124
           FRIDGT+VAPSDYRGLGNS+SWILFSKVNKV VVGGTLDARGASYWACKRSGKSCPVGAP
Sbjct: 84  FRIDGTLVAPSDYRGLGNSDSWILFSKVNKVFVVGGTLDARGASYWACKRSGKSCPVGAP 143

Query: 125 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 184
           SMTFNWANNIVI+ LTSINS+QTHLVIN CKKVL+QNVKAIAPDQSP+TDGIHVQ S DV
Sbjct: 144 SMTFNWANNIVINGLTSINSRQTHLVINACKKVLVQNVKAIAPDQSPNTDGIHVQTSMDV 203

Query: 185 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 244
           TIT STLQTGDDCVSIG GTYNLFMTNLKCGPGHG+SIGSLGK+ NEDGVQNITLK+SIF
Sbjct: 204 TITSSTLQTGDDCVSIGAGTYNLFMTNLKCGPGHGVSIGSLGKELNEDGVQNITLKDSIF 263

Query: 245 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 304
           T SDNGIRIKTWARPSKGFVRNILFDNIIMNN KNPI+IDQNYCPD+KGCPR++SGIQIS
Sbjct: 264 TGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQNYCPDNKGCPRQSSGIQIS 323

Query: 305 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLM 364
           KV Y+NIRGTS T + VNF+CSVTNPC+EIKLQNIKLLYKNKAAMSSCKNVR SANA LM
Sbjct: 324 KVMYRNIRGTSATPEGVNFDCSVTNPCREIKLQNIKLLYKNKAAMSSCKNVRRSANAMLM 383

Query: 365 PRSCL 370
           PRSCL
Sbjct: 384 PRSCL 388

[Close]

BLAST of CmoCh11G015370 vs. ExPASy TrEMBL
Match: A0A6J1EID8 (polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434519 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 4.4e-190
Identity = 322/365 (88.22%), Postives = 348/365 (95.34%), Query Frame = 0


Query: 5   SHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT 64
           ++  + FGAKPDGRTVSTAPFLK WASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT
Sbjct: 24  TYNVVSFGAKPDGRTVSTAPFLKTWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT 83

Query: 65  FRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAP 124
           FRIDGT+VAPSDYRGL +S+SWILFSKVNKVSVVGGTLDA+GASYWACK+SGK+CPVGAP
Sbjct: 84  FRIDGTLVAPSDYRGLEDSDSWILFSKVNKVSVVGGTLDAQGASYWACKKSGKNCPVGAP 143

Query: 125 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 184
           SMTFNWANNIVI+ LTSINS+QTHLVINGCKKVL+QNVKAIAPDQSP+TDGIHVQ S+DV
Sbjct: 144 SMTFNWANNIVINGLTSINSRQTHLVINGCKKVLVQNVKAIAPDQSPNTDGIHVQTSTDV 203

Query: 185 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 244
           TIT STLQTGDDCVSIG GTYNLFM+NLKCGPGHG+SIGSLGK+ NEDGVQNITLK+SIF
Sbjct: 204 TITSSTLQTGDDCVSIGAGTYNLFMSNLKCGPGHGVSIGSLGKELNEDGVQNITLKDSIF 263

Query: 245 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 304
           T SDNGIRIKTWARPSKGFVRNILFDNIIMNN KNPI+IDQNYCPD+KGCPR++SG+QIS
Sbjct: 264 TGSDNGIRIKTWARPSKGFVRNILFDNIIMNNAKNPIVIDQNYCPDNKGCPRQSSGVQIS 323

Query: 305 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLM 364
           KVTY+NIRGTS T + VNF+CSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSAN  LM
Sbjct: 324 KVTYRNIRGTSATPEGVNFDCSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANVMLM 383

Query: 365 PRSCL 370
           PRSCL
Sbjct: 384 PRSCL 388

[Close]

BLAST of CmoCh11G015370 vs. ExPASy TrEMBL
Match: A0A5A7T5V3 (Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00220 PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.7e-176
Identity = 298/365 (81.64%), Postives = 332/365 (90.96%), Query Frame = 0


Query: 5   SHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT 64
           ++  L FGAK + RT ST PFLKAWASACNS  PS+IYVPKGRFL+KGIVFKGPCKNQIT
Sbjct: 27  NYNVLSFGAKGNERTDSTVPFLKAWASACNSPTPSTIYVPKGRFLIKGIVFKGPCKNQIT 86

Query: 65  FRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAP 124
           FRIDGT+VAPSDYR LGNS+SWILFSKVNKVSVVGGTLD +GASYWACK SGK+CPVGAP
Sbjct: 87  FRIDGTVVAPSDYRALGNSDSWILFSKVNKVSVVGGTLDGKGASYWACKTSGKNCPVGAP 146

Query: 125 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 184
           SMTFNWANNIVIS LTSINS+QTHLVINGC  V++QNVKAIAPDQSP+TDGIHVQ S  V
Sbjct: 147 SMTFNWANNIVISGLTSINSRQTHLVINGCNNVVVQNVKAIAPDQSPNTDGIHVQTSKGV 206

Query: 185 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 244
           TI   TLQTGDDCVSIGPGTYNLFMTNLKCGPGHG+SIGSLGK+  E GVQNITLKN+IF
Sbjct: 207 TIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGVSIGSLGKELKEAGVQNITLKNAIF 266

Query: 245 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 304
           + SDNGIRIKTWARPSKGFVRNI+FDN+IMNNV+NPI+IDQ+YCPD+KGCPR+NSG+QIS
Sbjct: 267 SGSDNGIRIKTWARPSKGFVRNIVFDNLIMNNVENPIVIDQHYCPDNKGCPRQNSGVQIS 326

Query: 305 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLM 364
           KVTY+NIRGTS T +AV+F+CS+TNPC +IKLQ+IKLLYKNKAA S CKNVRGS+   LM
Sbjct: 327 KVTYRNIRGTSATLEAVSFDCSITNPCTDIKLQDIKLLYKNKAATSYCKNVRGSSTGILM 386

Query: 365 PRSCL 370
           PRSC+
Sbjct: 387 PRSCM 391

[Close]

BLAST of CmoCh11G015370 vs. ExPASy TrEMBL
Match: A0A1S3CPW9 (polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103503343 PE=3 SV=1)

HSP 1 Score: 627.9 bits (1618), Expect = 2.7e-176
Identity = 298/365 (81.64%), Postives = 332/365 (90.96%), Query Frame = 0


Query: 5   SHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT 64
           ++  L FGAK + RT ST PFLKAWASACNS  PS+IYVPKGRFL+KGIVFKGPCKNQIT
Sbjct: 27  NYNVLSFGAKGNERTDSTVPFLKAWASACNSPTPSTIYVPKGRFLIKGIVFKGPCKNQIT 86

Query: 65  FRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAP 124
           FRIDGT+VAPSDYR LGNS+SWILFSKVNKVSVVGGTLD +GASYWACK SGK+CPVGAP
Sbjct: 87  FRIDGTVVAPSDYRALGNSDSWILFSKVNKVSVVGGTLDGKGASYWACKTSGKNCPVGAP 146

Query: 125 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 184
           SMTFNWANNIVIS LTSINS+QTHLVINGC  V++QNVKAIAPDQSP+TDGIHVQ S  V
Sbjct: 147 SMTFNWANNIVISGLTSINSRQTHLVINGCNNVVVQNVKAIAPDQSPNTDGIHVQTSKGV 206

Query: 185 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 244
           TI   TLQTGDDCVSIGPGTYNLFMTNLKCGPGHG+SIGSLGK+  E GVQNITLKN+IF
Sbjct: 207 TIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGVSIGSLGKELKEAGVQNITLKNAIF 266

Query: 245 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 304
           + SDNGIRIKTWARPSKGFVRNI+FDN+IMNNV+NPI+IDQ+YCPD+KGCPR+NSG+QIS
Sbjct: 267 SGSDNGIRIKTWARPSKGFVRNIVFDNLIMNNVENPIVIDQHYCPDNKGCPRQNSGVQIS 326

Query: 305 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLM 364
           KVTY+NIRGTS T +AV+F+CS+TNPC +IKLQ+IKLLYKNKAA S CKNVRGS+   LM
Sbjct: 327 KVTYRNIRGTSATLEAVSFDCSITNPCTDIKLQDIKLLYKNKAATSYCKNVRGSSTGILM 386

Query: 365 PRSCL 370
           PRSC+
Sbjct: 387 PRSCM 391

[Close]

BLAST of CmoCh11G015370 vs. TAIR 10
Match: AT2G43890.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 523.9 bits (1348), Expect = 1.1e-148
Identity = 237/365 (64.93%), Postives = 304/365 (83.29%), Query Frame = 0


Query: 5   SHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQIT 64
           ++  + FGAKPDGRT ST  FL AW +AC SAA  ++ VP+G FLLK + F+GPC+++IT
Sbjct: 28  NYNVVSFGAKPDGRTDSTKAFLGAWQAACRSAAAVTVTVPRGSFLLKPVEFRGPCRSRIT 87

Query: 65  FRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAP 124
           F+I GTIVAPSDYRGLGNS  WILF KVN++S++GGTLDARGAS+WAC++SGKSCPVGA 
Sbjct: 88  FQIYGTIVAPSDYRGLGNSGYWILFVKVNRISIIGGTLDARGASFWACRKSGKSCPVGAR 147

Query: 125 SMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDV 184
           SMTFNWAN++V+S LTSINSQ THLVIN C  V+++ VK +APDQSP+TDG+HVQ S+ V
Sbjct: 148 SMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVKLVAPDQSPNTDGLHVQGSAGV 207

Query: 185 TITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIF 244
           T+TD T  TGDDC+SIGPGT NL+M+ L CGPGHGISIGSLG+D NE GV+NITL NS+F
Sbjct: 208 TVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIGSLGRDANEAGVENITLINSVF 267

Query: 245 TRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQIS 304
           + SDNG+RIKTWAR S GFVRN+LF N+IM NV+NPII+DQNYCP ++GCP++ SG++IS
Sbjct: 268 SGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIVDQNYCPSNQGCPKQGSGVKIS 327

Query: 305 KVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLM 364
           +V Y+NI+GTS TQ+A+ F+CS +NPC+ I+L +IKL +  ++A S+CKN++G     +M
Sbjct: 328 QVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTFNGRSATSTCKNIKGVKAGVVM 387

Query: 365 PRSCL 370
           P+ CL
Sbjct: 388 PQGCL 392

[Close]

BLAST of CmoCh11G015370 vs. TAIR 10
Match: AT1G05650.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 458.4 bits (1178), Expect = 5.5e-129
Identity = 211/362 (58.29%), Postives = 277/362 (76.52%), Query Frame = 0


Query: 9   LDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRID 68
           + FGAKPDG T STA FLKAW  AC SAA +++ VP G FLLK I F GPCK++ITF++ 
Sbjct: 31  VSFGAKPDGVTDSTAAFLKAWQGACGSAASATVVVPTGTFLLKVITFGGPCKSKITFQVT 90

Query: 69  GTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAPSMTF 128
           GT+VAP DYR  GNS SWILF+KVN+ S+VGGT DARG+ +W+C++SG++CP G  S++F
Sbjct: 91  GTVVAPEDYRTFGNSGSWILFNKVNRFSLVGGTFDARGSGFWSCRKSGQNCPPGVRSISF 150

Query: 129 NWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDVTITD 188
           N A +++IS + S+NSQ +H+ +NGC  V ++N++ +AP  SP+TDG  VQ S+ VT+T 
Sbjct: 151 NSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQFSTGVTLTG 210

Query: 189 STLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIFTRSD 248
           ST+QTGDDCV+IG GT N  ++ L CGPGHG+SIGSL K  NEDGV+N+T+ +S+FT S 
Sbjct: 211 STVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSLAKQLNEDGVENVTVSSSVFTGSQ 270

Query: 249 NGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQISKVTY 308
           NG+RIK+WARPS GFVRN+ F N+IM NV+NPIIIDQNYCP ++GCP ++SG++I++VTY
Sbjct: 271 NGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIIIDQNYCPSNQGCPTEHSGVKITQVTY 330

Query: 309 KNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLY-KNKAAMSSCKNVRGSANAKLMPRS 368
           KNI+GTS TQ+A+   CS +NPC  I LQ+IKL Y K   A S C N  G     + P S
Sbjct: 331 KNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYNKGTPATSLCFNAVGKNLGVIQPTS 390

Query: 369 CL 370
           CL
Sbjct: 391 CL 392

[Close]

BLAST of CmoCh11G015370 vs. TAIR 10
Match: AT1G05660.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 454.9 bits (1169), Expect = 6.1e-128
Identity = 210/362 (58.01%), Postives = 275/362 (75.97%), Query Frame = 0


Query: 9   LDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRID 68
           + FGAKPDG T ST  FLKAW  AC SA+ +++ VPKG FLLK I F GPCK++ITF++ 
Sbjct: 31  VSFGAKPDGVTDSTGAFLKAWQGACVSASSATVVVPKGTFLLKVITFGGPCKSKITFQVA 90

Query: 69  GTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAPSMTF 128
           GT++AP DYR  GNS  WILF+KVN+ S+VGGT DAR   +W+C++SG++CP G  S++F
Sbjct: 91  GTVIAPEDYRTFGNSGFWILFNKVNRFSLVGGTFDARANGFWSCRKSGQNCPPGVRSISF 150

Query: 129 NWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDVTITD 188
           N A +++IS + S+NSQ TH+ +NGC  V+++NVK +AP  SP+TDG HVQ S+ VT T 
Sbjct: 151 NSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQHSTGVTFTG 210

Query: 189 STLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIFTRSD 248
           ST+QTGDDCV+IGPGT NL +T L CGPGHG+SIGSL K+  EDGV+N+T+ +S+FT S 
Sbjct: 211 STVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAKELKEDGVENVTVSSSVFTGSQ 270

Query: 249 NGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQISKVTY 308
           NG+RIK+WARPS GFVR + F +++M NV+NPIIIDQNYCP  +GCP + SG++IS+VTY
Sbjct: 271 NGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTY 330

Query: 309 KNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLY-KNKAAMSSCKNVRGSANAKLMPRS 368
           KNI+GTS TQ+A+   CS ++PC  I LQ+IKL Y K   A S C N  G +   + P S
Sbjct: 331 KNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYNKGTPATSFCFNAVGKSLGVIQPTS 390

Query: 369 CL 370
           CL
Sbjct: 391 CL 392

[Close]

BLAST of CmoCh11G015370 vs. TAIR 10
Match: AT2G43880.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 445.3 bits (1144), Expect = 4.9e-125
Identity = 197/359 (54.87%), Postives = 278/359 (77.44%), Query Frame = 0


Query: 11  FGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKGPCKNQITFRIDGT 70
           +GA+ DGR  +T  FL AW+ AC S A + +YVP+G +L+K +VF GPCKN ITF+ DGT
Sbjct: 36  YGARGDGRADATKSFLTAWSLACGSRARAMVYVPRGTYLVKNLVFWGPCKNIITFKNDGT 95

Query: 71  IVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSCPVGAPSMTFNW 130
           +VAP++Y  +GNS  WILF+KVN++SV GGT+DARGA YW+C++ G  CP GA S++F+W
Sbjct: 96  LVAPANYWDIGNSGYWILFAKVNRISVYGGTIDARGAGYWSCRKKGSHCPQGARSISFSW 155

Query: 131 ANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQISSDVTITDST 190
            NN+++S L+S NSQ  H+ ++    V I+NV+  AP  SP+TDGIHVQ SS VTI+  T
Sbjct: 156 CNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVRIRAPSGSPNTDGIHVQSSSGVTISGGT 215

Query: 191 LQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITLKNSIFTRSDNG 250
           + TGDDC+++  G+ N+++  + CGPGHGISIGSLG   NE+GVQN+T+ +S+FT++ NG
Sbjct: 216 IATGDDCIALSQGSRNIWIERVNCGPGHGISIGSLGDYANEEGVQNVTVTSSVFTKTQNG 275

Query: 251 IRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNSGIQISKVTYKN 310
           +RIKTWARPS+GFV N++F N+IMNNV+NP+IIDQNYCP+ KGCPR++SG++IS VT+ N
Sbjct: 276 VRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQNYCPNGKGCPRQSSGVKISGVTFAN 335

Query: 311 IRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSANAKLMPRSCL 370
           I+GTSTT  A+  +CS +N C  ++LQ+IKL Y  +++ S C+N  G A+  ++PR+C+
Sbjct: 336 IKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTYMRRSSASYCRNAHGRASGVMVPRNCM 394

[Close]

BLAST of CmoCh11G015370 vs. TAIR 10
Match: AT3G59850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 426.0 bits (1094), Expect = 3.0e-119
Identity = 206/370 (55.68%), Postives = 265/370 (71.62%), Query Frame = 0


Query: 2   SKESHESLDFGAKPDGRTVSTAPFLKAWASACNSAAPSSIYVPKGRFLLKGIVFKG-PCK 61
           S +++  L +GAKPDG+T ST  F   WA AC S  P +I VPKGRFLL+ I+F G  CK
Sbjct: 19  SAQTYNILSYGAKPDGKTDSTKAFTVLWAKACASVKPVTILVPKGRFLLRSIIFDGSKCK 78

Query: 62  NQ-ITFRIDGTIVAPSDYRGLGNSNSWILFSKVNKVSVVGGTLDARGASYWACKRSGKSC 121
            + +TFRI GT+VAPSDYR +G  N WILF  ++ +SV GG LDA+GAS W+CK+SGK+C
Sbjct: 79  RKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGISVYGGVLDAQGASLWSCKKSGKNC 138

Query: 122 PVGAPSMTFNWANNIVISRLTSINSQQTHLVINGCKKVLIQNVKAIAPDQSPHTDGIHVQ 181
           P GA S+ F  + N+VIS LTS+NSQ  H+ INGC  V +  VK  A   SP+TDGIHVQ
Sbjct: 139 PSGATSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQ 198

Query: 182 ISSDVTITDSTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGISIGSLGKDFNEDGVQNITL 241
            SS V+I +S + TGDDCVSIGPGT  L++ N+ CGPGHGISIGSLGK+  E GVQNIT+
Sbjct: 199 SSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITV 258

Query: 242 KNSIFTRSDNGIRIKTWARPSKGFVRNILFDNIIMNNVKNPIIIDQNYCPDDKGCPRKNS 301
           K + FT ++NG+RIK+WARPS GF +NI F + +MNNV+NPI+IDQNYCP ++ CP + S
Sbjct: 259 KTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVS 318

Query: 302 GIQISKVTYKNIRGTSTTQKAVNFECSVTNPCKEIKLQNIKLLYKNKAAMSSCKNVRGSA 361
           GI+IS V + +I GTS T+  V  +CS   PC  I++Q++KL Y+NK A + C +  GS 
Sbjct: 319 GIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYRNKPATTDCSHAGGSE 378

Query: 362 NAKLMPRSCL 370
                P SCL
Sbjct: 379 AGFQRPNSCL 388

The following BLAST results are available for this feature:

BLAST of CmoCh11G015370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P48979	1.7e-119	58.06	Polygalacturonase OS=Prunus persica OX=3760 PE=2 SV=1	[more]
O22818	1.2e-99	51.37	Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana OX=3702 GN=At2g4386...	[more]
Q39786	9.1e-76	41.10	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q39766	2.0e-75	41.10	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q9SFB7	2.0e-75	43.44	Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2	[more]

BLAST of CmoCh11G015370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQ32	3.2e-209	98.10	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434630 PE=3 SV=1	[more]
A0A6J1JPZ9	1.1e-190	89.32	polygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111486684 PE=3 SV=1	[more]
A0A6J1EID8	4.4e-190	88.22	polygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111434519 PE=3 SV=1	[more]
A0A5A7T5V3	2.7e-176	81.64	Polygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CPW9	2.7e-176	81.64	polygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103503343 PE=3 SV=1	[more]

BLAST of CmoCh11G015370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G43890.1	1.1e-148	64.93	Pectin lyase-like superfamily protein	[more]
AT1G05650.1	5.5e-129	58.29	Pectin lyase-like superfamily protein	[more]
AT1G05660.1	6.1e-128	58.01	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	4.9e-125	54.87	Pectin lyase-like superfamily protein	[more]
AT3G59850.1	3.0e-119	55.68	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 264..285 e-value: 5900.0 score: 1.7 coord: 181..202 e-value: 51.0 score: 12.7 coord: 154..179 e-value: 6100.0 score: 1.6 coord: 234..255 e-value: 6.4 score: 15.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 4..367 e-value: 4.0E-112 score: 377.2
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 33..356 e-value: 3.6E-86 score: 289.2
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 211..224
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 4..368
None	No IPR available	PANTHER	PTHR31375:SF31	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN	coord: 4..368
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 9..369

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015370.1	CmoCh11G015370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0047911	galacturan 1,4-alpha-galacturonidase activity
molecular_function	GO:0004650	polygalacturonase activity