CmoCh11G015260 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015260
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
Location	Cmo_Chr11: 10905004 .. 10910325 (+)
RNA-Seq Expression	CmoCh11G015260
Synteny	CmoCh11G015260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAATTCCCTAATTTGCCTCTCAATCCAATGGAGGCTCTAAACCTCTACAATGGACGATCGAAGAACATCATCGATTAACTCCGCCAGGTCTCTTCCCATCCACACTCCCAAATGGGCCTTCACGTTCTCATATCCCCTCCTTTCTCTTCCTCCACATCCATAATCTTCAAACCCACTTCTTCCGCCTCGCTTCTCTTCAAATTTGGCTATGCTTTATCCAAATCTCCTTCCTCCACCACAACCTATCTCCGACCTTCTTCACTCAAATATGTTGCTTCTCCTCCAACTTCAATTCCGCTTTCTGGGTATTTCTCTCGGAGAACTCGTAGGTTTCATGGTGGGTTCATTGCAGCTACTGCGGCACCTGGGTCTGTCCAAAAATCCGAGGAATTGAGGCCTTCCGTTTCGCCTGACCAATCTTGGGTCCAGAGACAAAATGGGATTGAGTAAGACTCTCAACTTCCTTGCAGATGTTTGCTTGTGTTTCTTACTTTTCTCTTGCAATTGGAAAGTGATATGGATATGTGTGTGTGTGTGTGTTTGTATGGAAGGCTTAGAGGTTTTGTGTCAAAGCATTATGTTGGTACAGGATGAAATTTGGAGTTGGATGAGCTACTCGAGTGCAATTGAAGGGTCGGATCATTATTTTCAGTGTCTATTATTTCTAAGTTTTTAAGGTGTTACCATGTTACTATATAACTTGTGGCTTGAATTTCATGTACAAATTTAGACTTCTTAGGTACTAAGTTGTGAGATCCCACCTCGGTTGGGGAGGAGAGTGAAGTATTTTTTATAAGGGTGTGGAAACCTCCCTTTAGCAGACGTGTTTTAGAAACCTTGAGGGGAAGCTCAAAAGAGAAAGCCCAAAGAGTGGACTGTTACAAATGGTATCAGAGCTAGACATCGGGCGATGTGCCAGCGAGGAGCTAAGCCTCAAAGGGGGGGTGGGACACAAGGCGGTGTGTCAGCAAGGACGCTGGGTCCCGAAGGGGGATGGATTGGGAGTCCCACAACAGTTGGAGAAAGGAATGAATGTCAGCGAGGACGTTAGGCTCTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCCCTCTAGCAGACATGTTTTAAAAACCTTAAGGGGAAGCCTGAAAGAGAAAGTCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGACGGTTACAAATGGTATCAGACATTGGGCGATGTGCCAGCGAGGAGCTAAGCCTCGAAGGGGGGTGGGACACAAGGCGGTGTGTCAGCAAGGCCGCTGGGACCCGAAGGGGGAGTGGATTGAGGGTCCCACAACAGTTGGAGAAGGGAATGAGTGCCAACGAGGACGTTAGGCTCCGAAGGGGGTTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAGCGTTCTTTATAAGGATGTGGAACTTCTCCCTAGCATACGCATTTTAAAACCTTGAGGGGAAGCCCGGAAGGGAAAGCCCGAAGAGGACAATATTTGCTAGCCTAACAAGAAACCAACCCCTCATTCTTGAACAAAACAACAAAAAAGAACAAGAGAAAAAGAACCAAGAAAAAACTGAGCCTGCAAAGCTCTATAAACTCTTCAAAATAATGTAAACAATCTCTTAAATGAGGCAATAGAGGGAGGACAAAGGAATTCACTATCCTTGCGATGAACCTTAGATAACCCGAGCTCAATTCGGGAACCAAGGAACATTTATTGTCATGCCCTCAAGGTCACATAACAAGATCAAGAGCCAAAAAGTTGTGAGAAGCTTTACTTTCTCGTGTTCAAAAACATGGTGAGCTCGACTCGGGATGACCAAGAGAGAGATAAAGCTTTCTTACTCAACCGTTTTCAAGTAGATCTTAAGGAAAAACTTAGCATTAAGAAAACTATAGGTTCATTCACAAGAGTTCAAGATTGAGTTGAAGTGGAGTTTAACTCGAGTTTCATTTTAATGCGAGTAACATTTCCAAATACCTATATTACTAAGAAGCCGGGATACGTATAGGAGACATAGATACAATACGACCCGGACATAATAACACACTAATTTTTAAAACTATGGGATACAGCGTGACAACGCGCATGCCAAAGGACCCTAGCCTTTTGAAGCATCGAGGATTGAATTAACGCGGTCGGTTTCTTTGTAATATCCTCTTATGTTTATTGAAAAGAAAAGGAAAAAGGGCTTCTCTTGGTGTGCTCCTCATAAAGCTTCAAAGACTATGAATTCTGTTTGACGACGTTTATGCAGGCACGGGTGGACCCTTTGGTTTTATCGTATGAAGGTTTTATGTAGTAAACATTCGTTCGTTTTATCGTTCGAAAGAATTTGAAGTGTTTATTTATTTTGGAGGTCTTGGAACCGTATGCGTTGCAGTCTTAAACTCGGGCTCTCTAGCTCGGGACTTTTGTATTTACTCCCCCTTTTTAACCAATGACATGCCTCTTGTGAGTATTGTTTTGTAATCTCTTTTGGCTTTGACGACTGTGGGCAGCCGTCGTTTTTCTCTATTTCCATCTCGAGTAATATAGTATTGAGAATTATGTCCGAAATCTGAACGTTTCTTTTGTTTTTATCCTTAACCAGACCCTTAACAGGTTCCGAAGTGCCTTTACGAGGTCGTATTTACCATGAAACTTACGGGTGTCAAATGAATATTAACGATATGGAGGTTGTTCTATCAATCATGAAAAATGCTGGATATAGCGAAACTGTCGACGTTCCAGAGACGGCGGAGGTCATTTTTATCAACACTTGTGCAATCAGGGACAACGCCGAACAGAAGGTGTGGCAGAGACTTAATTACTTTTGGTTTCTGAAGAGGGAATGGAAAAGTAATGTTGCCATCGGAAGGTCGCAGTCTCGACACCCTCCGAAAGTAGTCGTTTTGGGGTGCATGGCGGAGAGGTTGAAAGATAAGATACTAGACGCAGACAAGATGGTCGATGTAGTTTGTGGACCTGATGCTTACCGAGATCTACCACGATTATTGGATGAAGTAGATTATGGTCAAAAGGGTATCAACACACTTCTTTCCCTTGAAGAAACGTATGCAGACATAAGTCCCGTACGAATATCGAAAAATTCTGTCACTGCGTTTGTATCCGTGATGAGAGGTTGCAACAATATGTGTTCGTTCTGCATTGTTCCTTTCACTCGGGGCAGAGAACGGTCACGTCCTGTTGAATCAATTGTGTCTGAGGTCAGGGAACTTTATAGAGAAGGTGTGAAAGAAGTAACTCTTCTGGGCCAGAATGTTAACAGCTATAACGATACCATCGATAATACTGATGTCGAACCGGGGACTAACTGGAAACTCAGTGATGGATTTTCGACCATAGCGAAGGTAAAGAAGATGGGTTTGCGTTTTTCTGATCTTTTAGATCGTCTTTCCACAGAATTTCCTGAGATGAGGTTTCGATACACATCTCCACATCCTAAAGACTTTCCCGACGAATTCCTTTATTTGATGCGAGACAAACACAACATTTGCAAAAGCATCCATTTACCTGCTCAGAGCGGGAATAGCACGGTTCTCGAAAGAATGCGTCGGGGGTATACACGAGAGGTCTACTTGGATCTTGTGCACAAGATTCGATCGATCATTCCCGACGTGGGAATAACTAGTGATTTCATTTGTGGTAAGTGGCCTTTTGAACATCTAGTATTTTGTATTAGATATTGGTTATTATGCACTTGGTACTTTGGTATGCCATCAAGTTGTTAGTCTTATAAGCCCCGATGACTGCCTAGCTAATAGCTAATACTAGTTGTTGGTCTTATAAGTCCACCGCTAGTAGATATTGTCTTTTTTGGGCTTTCCTTTCTGGGTTTCTCCTCAAAGTTTATAAAACGCGTCTGCTAGGGAGAGGTTTCCACACACTTATAAAGAATGCTTCGTTCTCCTCCTCAACCGATGTGGGATCTCACAATCCCCACCCCCTTTTGGGGCCCAGCGTCCTTGCTGGCACACCGCCTCGTGTTCACCTCCTTTCGGAGCTCAGCCTCCTCACTGGCACATCGCCAAGAGTCTGGCTTTGATATCATTTGTAACGGCCTAAGCCCACCGCTAGTAGATACTGTCCTCTTTTGGCTTTCCCTTCCGGACTTCCCCTCAAGGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTTCTCCCCAATTGATGTACAATCTCACAATCCACCCCCATTTGAGGCCCAACGTCCTTGCTGGCACACTACCTCTTGTTTACCCTCCTTCGGGGCTCAACCTCCTCGCTGGCACATCGCCCGGTGTTTGACTTTGATACCATTCATAATTGCCCAAGCACACCGTTAATAAATATTGTCCTCTTTTGGCTTTTCTTTTCGGGTTTTCCTTCAAGATTTTTAAAACGCGTCTGCTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTCAAATACCTGGTTTGATACTGTCACAGAGTTTACTGGGTTTGATGCATATCATATTCAATTTTGTCAGCAATGTAGCGGTATTACTCTCCTTATACATCATTCCTCATTCCAATTTACAGGTTTCTGTGGCGAGACCGAAGAAGAACATGCCGACACTCTAAGTCTGATTAACGAAGTCGGGTACGACATGGCTTACATGTTTGCATATAGCATGAGGGAAAAAACTCATGCACATCGAAACTATGTCGATGACGTTCCAGAGGACGTGAAACAGAGAAGACTCACCGAACTCATCGAAACGTTTCGAAACAGTACAGGACAGTGTTATGATATGCAAATTGGTAGTATCCAATTGGTTCTTGTTGAAGGACCAAACAAGAGAGCCCCAGAGACGGAGATGATCGGCAAGAGTGACCGAGGTCATAGAGTTTCGTTTGTTAATGTAGCTGTTCCACATCGAGATGGCGATTACGATGGACAACGGAAAGTGGCAATTGGTGACTTTGTTGAAGTTCGTATATCGAAATCGACACGAGCATCGTTGTTCGGAGAGGCACTTGCTGTTACAAAACTAAGCTCATTTTACAACAGTATGGATGAATCAATTGCCTGTGTGAGCTGAAGTTGTAATGAATTTTGATCATTTTGATTTGTGATGAAATGTTTAATACACTTGGGGTACTTTATGTATTAGTTTCATTGCACGTTTTTTTCTCTGTTCAAAGTGTAAAAATGTCATTGAATCTTGGCTATAGCTGTCTTATGTTCTCAAACACTTGTGAGTTACTAAGATTGTGCTCGGTCAGATCGGTTTGTAG

mRNA sequence

CCAAATTCCCTAATTTGCCTCTCAATCCAATGGAGGCTCTAAACCTCTACAATGGACGATCGAAGAACATCATCGATTAACTCCGCCAGGTCTCTTCCCATCCACACTCCCAAATGGGCCTTCACGTTCTCATATCCCCTCCTTTCTCTTCCTCCACATCCATAATCTTCAAACCCACTTCTTCCGCCTCGCTTCTCTTCAAATTTGGCTATGCTTTATCCAAATCTCCTTCCTCCACCACAACCTATCTCCGACCTTCTTCACTCAAATATGTTGCTTCTCCTCCAACTTCAATTCCGCTTTCTGGGTATTTCTCTCGGAGAACTCGTAGGTTTCATGGTGGGTTCATTGCAGCTACTGCGGCACCTGGGTCTGTCCAAAAATCCGAGGAATTGAGGCCTTCCGTTTCGCCTGACCAATCTTGGGTCCAGAGACAAAATGGGATTGAACCCTTAACAGGTTCCGAAGTGCCTTTACGAGGTCGTATTTACCATGAAACTTACGGGTGTCAAATGAATATTAACGATATGGAGGTTGTTCTATCAATCATGAAAAATGCTGGATATAGCGAAACTGTCGACGTTCCAGAGACGGCGGAGGTCATTTTTATCAACACTTGTGCAATCAGGGACAACGCCGAACAGAAGGTGTGGCAGAGACTTAATTACTTTTGGTTTCTGAAGAGGGAATGGAAAAGTAATGTTGCCATCGGAAGGTCGCAGTCTCGACACCCTCCGAAAGTAGTCGTTTTGGGGTGCATGGCGGAGAGGTTGAAAGATAAGATACTAGACGCAGACAAGATGGTCGATGTAGTTTGTGGACCTGATGCTTACCGAGATCTACCACGATTATTGGATGAAGTAGATTATGGTCAAAAGGGTATCAACACACTTCTTTCCCTTGAAGAAACGTATGCAGACATAAGTCCCGTACGAATATCGAAAAATTCTGTCACTGCGTTTGTATCCGTGATGAGAGGTTGCAACAATATGTGTTCGTTCTGCATTGTTCCTTTCACTCGGGGCAGAGAACGGTCACGTCCTGTTGAATCAATTGTGTCTGAGGTCAGGGAACTTTATAGAGAAGGTGTGAAAGAAGTAACTCTTCTGGGCCAGAATGTTAACAGCTATAACGATACCATCGATAATACTGATGTCGAACCGGGGACTAACTGGAAACTCAGTGATGGATTTTCGACCATAGCGAAGGTAAAGAAGATGGGTTTGCGTTTTTCTGATCTTTTAGATCGTCTTTCCACAGAATTTCCTGAGATGAGGTTTCGATACACATCTCCACATCCTAAAGACTTTCCCGACGAATTCCTTTATTTGATGCGAGACAAACACAACATTTGCAAAAGCATCCATTTACCTGCTCAGAGCGGGAATAGCACGGTTCTCGAAAGAATGCGTCGGGGGTATACACGAGAGGTCTACTTGGATCTTGTGCACAAGATTCGATCGATCATTCCCGACGTGGGAATAACTAGTGATTTCATTTGTGGTTTCTGTGGCGAGACCGAAGAAGAACATGCCGACACTCTAAGTCTGATTAACGAAGTCGGGTACGACATGGCTTACATGTTTGCATATAGCATGAGGGAAAAAACTCATGCACATCGAAACTATGTCGATGACGTTCCAGAGGACGTGAAACAGAGAAGACTCACCGAACTCATCGAAACGTTTCGAAACAGTACAGGACAGTGTTATGATATGCAAATTGGTAGTATCCAATTGGTTCTTGTTGAAGGACCAAACAAGAGAGCCCCAGAGACGGAGATGATCGGCAAGAGTGACCGAGGTCATAGAGTTTCGTTTGTTAATGTAGCTGTTCCACATCGAGATGGCGATTACGATGGACAACGGAAAGTGGCAATTGGTGACTTTGTTGAAGTTCGTATATCGAAATCGACACGAGCATCGTTGTTCGGAGAGGCACTTGCTGTTACAAAACTAAGCTCATTTTACAACAGTATGGATGAATCAATTGCCTGTGTGAGCTGAAGTTGTAATGAATTTTGATCATTTTGATTTGTGATGAAATGTTTAATACACTTGGGGTACTTTATGTATTAGTTTCATTGCACGTTTTTTTCTCTGTTCAAAGTGTAAAAATGTCATTGAATCTTGGCTATAGCTGTCTTATGTTCTCAAACACTTGTGAGTTACTAAGATTGTGCTCGGTCAGATCGGTTTGTAG

Coding sequence (CDS)

ATGGGCCTTCACGTTCTCATATCCCCTCCTTTCTCTTCCTCCACATCCATAATCTTCAAACCCACTTCTTCCGCCTCGCTTCTCTTCAAATTTGGCTATGCTTTATCCAAATCTCCTTCCTCCACCACAACCTATCTCCGACCTTCTTCACTCAAATATGTTGCTTCTCCTCCAACTTCAATTCCGCTTTCTGGGTATTTCTCTCGGAGAACTCGTAGGTTTCATGGTGGGTTCATTGCAGCTACTGCGGCACCTGGGTCTGTCCAAAAATCCGAGGAATTGAGGCCTTCCGTTTCGCCTGACCAATCTTGGGTCCAGAGACAAAATGGGATTGAACCCTTAACAGGTTCCGAAGTGCCTTTACGAGGTCGTATTTACCATGAAACTTACGGGTGTCAAATGAATATTAACGATATGGAGGTTGTTCTATCAATCATGAAAAATGCTGGATATAGCGAAACTGTCGACGTTCCAGAGACGGCGGAGGTCATTTTTATCAACACTTGTGCAATCAGGGACAACGCCGAACAGAAGGTGTGGCAGAGACTTAATTACTTTTGGTTTCTGAAGAGGGAATGGAAAAGTAATGTTGCCATCGGAAGGTCGCAGTCTCGACACCCTCCGAAAGTAGTCGTTTTGGGGTGCATGGCGGAGAGGTTGAAAGATAAGATACTAGACGCAGACAAGATGGTCGATGTAGTTTGTGGACCTGATGCTTACCGAGATCTACCACGATTATTGGATGAAGTAGATTATGGTCAAAAGGGTATCAACACACTTCTTTCCCTTGAAGAAACGTATGCAGACATAAGTCCCGTACGAATATCGAAAAATTCTGTCACTGCGTTTGTATCCGTGATGAGAGGTTGCAACAATATGTGTTCGTTCTGCATTGTTCCTTTCACTCGGGGCAGAGAACGGTCACGTCCTGTTGAATCAATTGTGTCTGAGGTCAGGGAACTTTATAGAGAAGGTGTGAAAGAAGTAACTCTTCTGGGCCAGAATGTTAACAGCTATAACGATACCATCGATAATACTGATGTCGAACCGGGGACTAACTGGAAACTCAGTGATGGATTTTCGACCATAGCGAAGGTAAAGAAGATGGGTTTGCGTTTTTCTGATCTTTTAGATCGTCTTTCCACAGAATTTCCTGAGATGAGGTTTCGATACACATCTCCACATCCTAAAGACTTTCCCGACGAATTCCTTTATTTGATGCGAGACAAACACAACATTTGCAAAAGCATCCATTTACCTGCTCAGAGCGGGAATAGCACGGTTCTCGAAAGAATGCGTCGGGGGTATACACGAGAGGTCTACTTGGATCTTGTGCACAAGATTCGATCGATCATTCCCGACGTGGGAATAACTAGTGATTTCATTTGTGGTTTCTGTGGCGAGACCGAAGAAGAACATGCCGACACTCTAAGTCTGATTAACGAAGTCGGGTACGACATGGCTTACATGTTTGCATATAGCATGAGGGAAAAAACTCATGCACATCGAAACTATGTCGATGACGTTCCAGAGGACGTGAAACAGAGAAGACTCACCGAACTCATCGAAACGTTTCGAAACAGTACAGGACAGTGTTATGATATGCAAATTGGTAGTATCCAATTGGTTCTTGTTGAAGGACCAAACAAGAGAGCCCCAGAGACGGAGATGATCGGCAAGAGTGACCGAGGTCATAGAGTTTCGTTTGTTAATGTAGCTGTTCCACATCGAGATGGCGATTACGATGGACAACGGAAAGTGGCAATTGGTGACTTTGTTGAAGTTCGTATATCGAAATCGACACGAGCATCGTTGTTCGGAGAGGCACTTGCTGTTACAAAACTAAGCTCATTTTACAACAGTATGGATGAATCAATTGCCTGTGTGAGCTGA

Protein sequence

MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSPSSTTTYLRPSSLKYVASPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTGSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKSTRASLFGEALAVTKLSSFYNSMDESIACVS

Homology

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BLAST of CmoCh11G015260 vs. ExPASy Swiss-Prot
Match: Q8H0V1 (CDK5RAP1-like protein OS=Arabidopsis thaliana OX=3702 GN=At4g36390 PE=2 SV=1)

HSP 1 Score: 829.7 bits (2142), Expect = 2.2e-239
Identity = 403/513 (78.56%), Postives = 450/513 (87.72%), Query Frame = 0


Query: 112 EPLTGSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAI 171
           E    S++  +GRIYHETYGCQMNINDME+VL+IMKN+GY E V  PE+AEVIF+NTCAI
Sbjct: 118 ESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAI 177

Query: 172 RDNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMV 231
           R+NAEQ+VWQRLNYFWFLKREWK N A GR++S  PPKVVVLGCMAERLKDKILD+DKMV
Sbjct: 178 RENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMV 237

Query: 232 DVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 291
           DVVCGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCN
Sbjct: 238 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCN 297

Query: 292 NMCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPG 351
           NMC+FCIVPFTRGRERSRPVESI+ EV EL+  GVKEVTLLGQNVNSYND  D+ D E G
Sbjct: 298 NMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYND--DSADRESG 357

Query: 352 TNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKH 411
            NW+ S+GFS+  KVK MGLRF+DLLDRLS EFPEMRFR+TSPHPKD+PDE LYLMRD+H
Sbjct: 358 ANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRH 417

Query: 412 NICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEE 471
           NIC  IHLPAQSGNS +LE+MRRGYTRE YLDLV KIRSIIPDV ITSDFI GFCGETEE
Sbjct: 418 NICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEE 477

Query: 472 EHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQ 531
           EH +TLSL+  VGYDMAYMFAYSMREKTHAHRNY DDVPE+VKQRRLTELI+ FR +TG 
Sbjct: 478 EHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGP 537

Query: 532 CYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHR----DGDYDGQRKV 591
           CYD Q+GS QLVLVEGPNKRAPETE+IGK+D+GHRVSFV   +  +    DGD D +R  
Sbjct: 538 CYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGD-DLKRNP 597

Query: 592 AIGDFVEVRISKSTRASLFGEALAVTKLSSFYN 621
            IGDFVEV+I KSTRASLFGEALA++K+S F++
Sbjct: 598 GIGDFVEVQIEKSTRASLFGEALAISKMSLFHD 627

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BLAST of CmoCh11G015260 vs. ExPASy Swiss-Prot
Match: Q2R1U4 (CDK5RAP1-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0592800 PE=2 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 1.4e-238
Identity = 400/531 (75.33%), Postives = 456/531 (85.88%), Query Frame = 0


Query: 91  SEELRPSVSPDQSWVQRQNGIEPLTGSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAG 150
           S  L  S +   S  Q      P+T S    +GRIYHETYGCQMN+NDME+VLSIMKN G
Sbjct: 65  SRPLAASAATAVSEAQTDLESGPVTAS----KGRIYHETYGCQMNVNDMEIVLSIMKNEG 124

Query: 151 YSETVDVPETAEVIFINTCAIRDNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKV 210
           Y E V  PE+AE+IFINTCAIRDNAEQKVWQRLNYFWFLKR+WK+NVA GRS+S  PPK+
Sbjct: 125 YDEIVPDPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRQWKANVAAGRSRSLRPPKI 184

Query: 211 VVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADI 270
            VLGCMAERLK+KILD+DKMVDVVCGPDAYRDLPRLL EVDYGQKGINTLLSLEETYADI
Sbjct: 185 AVLGCMAERLKEKILDSDKMVDVVCGPDAYRDLPRLLQEVDYGQKGINTLLSLEETYADI 244

Query: 271 SPVRISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVT 330
           +PVRIS NSVTAFVS+MRGCNNMCSFCIVPFTRGRERSRPV SIV EV EL++ GVKEV 
Sbjct: 245 TPVRISDNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVSSIVREVGELWKAGVKEVM 304

Query: 331 LLGQNVNSYNDTIDNTDVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFR 390
           LLGQNVNSYNDT +  ++EPG NW+LS+GFS++ KVK MGLRF+DLLD+LS E+PEMRFR
Sbjct: 305 LLGQNVNSYNDTSEVEELEPGKNWELSEGFSSMCKVKNMGLRFADLLDQLSLEYPEMRFR 364

Query: 391 YTSPHPKDFPDEFLYLMRDKHNICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRS 450
           +TSPHPKD+PDE LYLMRD+HN+CK IH+PAQSG+S VLERMRRGYTRE YL+LV KIRS
Sbjct: 365 FTSPHPKDYPDELLYLMRDRHNVCKLIHMPAQSGSSAVLERMRRGYTREAYLELVQKIRS 424

Query: 451 IIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVP 510
           IIPDVG++SDFI GFCGETEEEHA+TL+L+  VGYDMAYMFAYSMREKTHAHRNYVDDVP
Sbjct: 425 IIPDVGLSSDFISGFCGETEEEHAETLTLVRAVGYDMAYMFAYSMREKTHAHRNYVDDVP 484

Query: 511 EDVKQRRLTELIETFRNSTGQCYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFV 570
           +DVKQRRL ELI TFR +T + YD Q+G++QLVLVEGPNKRAPETEMIGK+DRGHRVSF 
Sbjct: 485 DDVKQRRLAELISTFRETTAKIYDSQVGTVQLVLVEGPNKRAPETEMIGKTDRGHRVSFA 544

Query: 571 NVAVPHRDGDYDGQRKVAIGDFVEVRISKSTRASLFGEALAVTKLSSFYNS 622
           +V VPH   + D  RK  +GDF+EV+I+KS+ ASL G+ +A T LS FY +
Sbjct: 545 SVPVPH-TFEGDELRKPVVGDFIEVKITKSSTASLSGDVIARTSLSKFYKN 590

[Close]

BLAST of CmoCh11G015260 vs. ExPASy Swiss-Prot
Match: Q9JLH6 (Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 GN=Cdk5rap1 PE=1 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 4.6e-144
Identity = 275/520 (52.88%), Postives = 365/520 (70.19%), Query Frame = 0


Query: 114 LTGSEVPLRGR-IYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIR 173
           L+G E+  R R +Y ETYGCQMN+ND E+  SI++ +GY  T ++ E A+VI + TC+IR
Sbjct: 87  LSGDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIR 146

Query: 174 DNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVD 233
           + AEQ +W RL+    LK +        R +SR P ++ +LGCMAERLK +IL+ +KMVD
Sbjct: 147 EKAEQTIWNRLHQLKVLKAK--------RPRSRVPLRIGILGCMAERLKGEILNREKMVD 206

Query: 234 VVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 293
           ++ GPDAYRDLPRLL  V+ GQ+  N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+N
Sbjct: 207 LLAGPDAYRDLPRLLAVVESGQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDN 266

Query: 294 MCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGT 353
           MCS+CIVPFTRGRERSRPV SI+ EVR+L  +G+KEVTLLGQNVNS+    DN++V+  +
Sbjct: 267 MCSYCIVPFTRGRERSRPVASILDEVRKLSEQGLKEVTLLGQNVNSFR---DNSEVQFSS 326

Query: 354 --NWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDK 413
             +  LS GF+T  K K+ GLRFS LLD++S   PEMR R+TSPHPKDFPDE L L+R++
Sbjct: 327 TGSANLSRGFTTNYKPKQGGLRFSHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRER 386

Query: 414 HNICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETE 473
           HNICK IHLPAQSG+S VLE MRRGY+RE Y+ LVH IR  IP VG++SDFI GFCGETE
Sbjct: 387 HNICKQIHLPAQSGSSRVLEAMRRGYSREAYVALVHHIREAIPGVGLSSDFITGFCGETE 446

Query: 474 EEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTG 533
           ++H  T+SL+ EV Y+  ++FAYSMR+KT A+    DDVPE+VK RRL ELI  FR    
Sbjct: 447 DDHLQTVSLLREVQYNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEAS 506

Query: 534 QCYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIG 593
           +     +G  QLVLVEG +KR+  T++ G++D   +V F +  V     D   + +   G
Sbjct: 507 KVNATSVGCTQLVLVEGFSKRS-TTDLCGRNDANLKVIFPDAEVEDIT-DPGLKVRAQPG 566

Query: 594 DFVEVRISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 631
           D+V V+I  ++  +L G  L  T +       D S+ C++
Sbjct: 567 DYVLVKIISASSQTLKGHILCRTTMK------DSSMNCLT 586

[Close]

BLAST of CmoCh11G015260 vs. ExPASy Swiss-Prot
Match: Q9VGZ1 (CDK5RAP1-like protein OS=Drosophila melanogaster OX=7227 GN=CG6345 PE=2 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 2.3e-143
Identity = 261/500 (52.20%), Postives = 347/500 (69.40%), Query Frame = 0


Query: 124 RIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVWQRL 183
           +++ E YGCQMN ND EVV SI+K  GY    + PE A+VI + TCA+RD AEQ++  RL
Sbjct: 93  KVHFEVYGCQMNTNDTEVVFSILKENGYLRCQE-PEEADVIMLVTCAVRDGAEQRIRNRL 152

Query: 184 NYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDL 243
            +   +K +        RS  RHP ++ +LGCMAERLK+K+L+ ++ VDV+ GPD+Y+DL
Sbjct: 153 KHLRAMKNK--------RSTRRHPLQLTLLGCMAERLKEKLLEQEQCVDVIAGPDSYKDL 212

Query: 244 PRLLD-EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVPFT 303
           PRLL     YG   IN LLSL+ETYAD+ PVR++  S TAFVS+MRGC+NMC++CIVPFT
Sbjct: 213 PRLLAISRHYGNSAINVLLSLDETYADVMPVRLNSESPTAFVSIMRGCDNMCTYCIVPFT 272

Query: 304 RGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKLS--DGF 363
           RGRERSRP+ SIV+EV+ L  +GVKEVTLLGQNVNSY    D T  E   + K +   GF
Sbjct: 273 RGRERSRPLASIVAEVKALAEQGVKEVTLLGQNVNSYR---DRTAQEEQDSLKATPVPGF 332

Query: 364 STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP 423
           ST+ K K  G  F+ LL  ++   P+MR R+TSPHPKDF DE L ++RD  N+CK +HLP
Sbjct: 333 STVYKPKTGGTPFAALLRSVAQAVPDMRIRFTSPHPKDFSDEVLEVIRDHPNVCKQLHLP 392

Query: 424 AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI 483
           AQSGN+ VLERMRRGY+RE YL+LV  IR  +P+VG++SDFICGFCGETEEE  DT+SLI
Sbjct: 393 AQSGNTQVLERMRRGYSREAYLELVQHIRQFLPNVGLSSDFICGFCGETEEEFQDTVSLI 452

Query: 484 NEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQIGSI 543
            +V Y++AY+FAYSMREKT AHR Y DDVP +VK  RL  +++ FR    Q +    G  
Sbjct: 453 QQVQYNVAYLFAYSMREKTTAHRRYKDDVPINVKNERLQRMVQVFREGATQLHRKMEGQE 512

Query: 544 QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKS 603
           QL+L+EG +KR+ +    G++D   +V   ++ VP   GD   ++   +GDF+ VRI +S
Sbjct: 513 QLILIEGKSKRS-DAHWFGRNDANIKVIVPSIYVP-ISGDSTARKSFGVGDFLAVRIEES 572

Query: 604 TRASLFGEALAVTKLSSFYN 621
               L G  L ++ ++ F++
Sbjct: 573 NSQVLKGTPLELSNITDFHS 578

[Close]

BLAST of CmoCh11G015260 vs. ExPASy Swiss-Prot
Match: Q8BTW8 (Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cdk5rap1 PE=1 SV=2)

HSP 1 Score: 510.0 bits (1312), Expect = 3.9e-143
Identity = 270/506 (53.36%), Postives = 359/506 (70.95%), Query Frame = 0


Query: 114 LTGSEVPLRGR-IYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIR 173
           L+G E+  R R +Y ETYGCQMN+ND E+  SI++ +GY  T ++ E A+VI + TC+IR
Sbjct: 89  LSGDELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTSNLQE-ADVILLVTCSIR 148

Query: 174 DNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVD 233
           + AEQ +W RL+    LK +        R +SR P ++ +LGCMAERLK +IL+ +KMVD
Sbjct: 149 EKAEQTIWNRLHQLKVLKTK--------RPRSRVPLRIGILGCMAERLKGEILNREKMVD 208

Query: 234 VVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNN 293
           ++ GPDAYRDLPRLL  V+ GQ+  N LLSL+ETYADI PV+ S ++ +AFVS+MRGC+N
Sbjct: 209 LLAGPDAYRDLPRLLAVVESGQQAANVLLSLDETYADIMPVQTSPSATSAFVSIMRGCDN 268

Query: 294 MCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVE--P 353
           MCS+CIVPFTRGRERSRPV SI+ EVR+L  +G+KEVTLLGQNVNS+    DN++V+   
Sbjct: 269 MCSYCIVPFTRGRERSRPVASILDEVRKLSEQGLKEVTLLGQNVNSFR---DNSEVQFNN 328

Query: 354 GTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDK 413
             +  LS GF+T  K K+ GLRFS LLD++S   PEMR R+TSPHPKDFPDE L L+R++
Sbjct: 329 AGSANLSRGFTTNYKPKQGGLRFSHLLDQVSRIDPEMRIRFTSPHPKDFPDEVLQLIRER 388

Query: 414 HNICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETE 473
           HNICK IHLPAQSG+S VL+ MRRGY+RE Y+ LVH +R  IP V ++SDFI GFCGETE
Sbjct: 389 HNICKQIHLPAQSGSSRVLDAMRRGYSREAYVALVHHVRETIPGVSLSSDFITGFCGETE 448

Query: 474 EEHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTG 533
           ++H  T+SL+ EV Y+  ++FAYSMR+KT A+    DDVPE+VK RRL ELI  FR    
Sbjct: 449 DDHRQTVSLLREVQYNTGFLFAYSMRQKTRAYHRLKDDVPEEVKLRRLEELITVFREEAS 508

Query: 534 QCYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQR-KVAI 593
           +     +G  QLVLVEG +KR+  T++ G++D   +V F +  V   D    G + +   
Sbjct: 509 KANKTSVGCSQLVLVEGFSKRS-TTDLCGRNDANLKVIFPDAEV--EDITNPGLKVRAQP 568

Query: 594 GDFVEVRISKSTRASLFGEALAVTKL 616
           GD+V V+I+ ++  +L G  L  T +
Sbjct: 569 GDYVLVKITSASSQTLKGHILCRTTM 579

[Close]

BLAST of CmoCh11G015260 vs. ExPASy TrEMBL
Match: A0A6J1EIA8 (CDK5RAP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434491 PE=3 SV=1)

HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 630/630 (100.00%), Postives = 630/630 (100.00%), Query Frame = 0


Query: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSPSSTTTYLRPSSLKYVASPPTS 60
           MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSPSSTTTYLRPSSLKYVASPPTS
Sbjct: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSPSSTTTYLRPSSLKYVASPPTS 60

Query: 61  IPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTGSEVP 120
           IPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTGSEVP
Sbjct: 61  IPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTGSEVP 120

Query: 121 LRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVW 180
           LRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVW
Sbjct: 121 LRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVW 180

Query: 181 QRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAY 240
           QRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAY
Sbjct: 181 QRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAY 240

Query: 241 RDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 300
           RDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP
Sbjct: 241 RDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 300

Query: 301 FTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKLSDGF 360
           FTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKLSDGF
Sbjct: 301 FTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKLSDGF 360

Query: 361 STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP 420
           STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP
Sbjct: 361 STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP 420

Query: 421 AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI 480
           AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI
Sbjct: 421 AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI 480

Query: 481 NEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQIGSI 540
           NEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQIGSI
Sbjct: 481 NEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQIGSI 540

Query: 541 QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKS 600
           QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKS
Sbjct: 541 QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKS 600

Query: 601 TRASLFGEALAVTKLSSFYNSMDESIACVS 631
           TRASLFGEALAVTKLSSFYNSMDESIACVS
Sbjct: 601 TRASLFGEALAVTKLSSFYNSMDESIACVS 630

[Close]

BLAST of CmoCh11G015260 vs. ExPASy TrEMBL
Match: A0A6J1JMU5 (CDK5RAP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486642 PE=3 SV=1)

HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 616/630 (97.78%), Postives = 621/630 (98.57%), Query Frame = 0


Query: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYALSKSPSSTTTYLRPSSLKYVASPPTS 60
           MGLHVL +PPFSSSTSIIFKPTSSASLLFKFGYA + SPSST TY R SSLKYVASPPTS
Sbjct: 1   MGLHVLRAPPFSSSTSIIFKPTSSASLLFKFGYAFN-SPSSTRTYFRVSSLKYVASPPTS 60

Query: 61  IPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLTGSEVP 120
           IPLSGYFSRRTRRFHGGFIAATAAPGSV+KSEELRPSVSPDQSWVQRQNGIEPLTGSEVP
Sbjct: 61  IPLSGYFSRRTRRFHGGFIAATAAPGSVKKSEELRPSVSPDQSWVQRQNGIEPLTGSEVP 120

Query: 121 LRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVW 180
           LRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVW
Sbjct: 121 LRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNAEQKVW 180

Query: 181 QRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAY 240
           QRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAY
Sbjct: 181 QRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAY 240

Query: 241 RDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 300
           RDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP
Sbjct: 241 RDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCSFCIVP 300

Query: 301 FTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWKLSDGF 360
           FTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYND IDNTDVEPGTNWKLSDGF
Sbjct: 301 FTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDIIDNTDVEPGTNWKLSDGF 360

Query: 361 STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP 420
           STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP
Sbjct: 361 STIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICKSIHLP 420

Query: 421 AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI 480
           AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI
Sbjct: 421 AQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHADTLSLI 480

Query: 481 NEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDMQIGSI 540
            EVGYDMAYMFAYSMREKTHAHRNYVDDVPE+VKQRRLTELIETFRNSTGQCYDMQIGSI
Sbjct: 481 KEVGYDMAYMFAYSMREKTHAHRNYVDDVPEEVKQRRLTELIETFRNSTGQCYDMQIGSI 540

Query: 541 QLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKS 600
           QLVLVEGPNKRA ETEMIGKSDRGHRVSFVNVA+PHRDGDYDGQRKVAIGDFVEVRISKS
Sbjct: 541 QLVLVEGPNKRALETEMIGKSDRGHRVSFVNVAIPHRDGDYDGQRKVAIGDFVEVRISKS 600

Query: 601 TRASLFGEALAVTKLSSFYNSMDESIACVS 631
           TRASLFGEALAVTKLSSFYNSMDESIACVS
Sbjct: 601 TRASLFGEALAVTKLSSFYNSMDESIACVS 629

[Close]

BLAST of CmoCh11G015260 vs. ExPASy TrEMBL
Match: A0A5D3CNB2 (CDK5RAP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00300 PE=3 SV=1)

HSP 1 Score: 1140.9 bits (2950), Expect = 0.0e+00
Identity = 565/635 (88.98%), Postives = 589/635 (92.76%), Query Frame = 0


Query: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSSTTTYLRPSSLKYVA 60
           MG HVL +PPFSSST+IIFKPTSS   LFKF YAL     SKS SS+ +Y  PSS  YVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLT 120
           SP T+IPLSG FSR TRRF GGFIAAT A GSVQ+ EELRPS+S +QSWV RQNG E L 
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180
            S+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAE+IFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR+WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EV+ELYREGVKEVTLLGQNVNSYNDT +N D+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDM 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PE+VKQRRLTELIE FRNSTG+CYD 
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEV 600
           QIGS+QLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RK  +GDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 631
           RISKSTRASLFGEALA+TKLSSFYN MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of CmoCh11G015260 vs. ExPASy TrEMBL
Match: A0A1S3BLE1 (CDK5RAP1-like protein OS=Cucumis melo OX=3656 GN=LOC103491318 PE=3 SV=1)

HSP 1 Score: 1140.9 bits (2950), Expect = 0.0e+00
Identity = 565/635 (88.98%), Postives = 589/635 (92.76%), Query Frame = 0


Query: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSSTTTYLRPSSLKYVA 60
           MG HVL +PPFSSST+IIFKPTSS   LFKF YAL     SKS SS+ +Y  PSS  YVA
Sbjct: 1   MGFHVLRAPPFSSSTTIIFKPTSS---LFKFRYALYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLT 120
           SP T+IPLSG FSR TRRF GGFIAAT A GSVQ+ EELRPS+S +QSWV RQNG E L 
Sbjct: 61  SPTTAIPLSGSFSRSTRRFRGGFIAATTASGSVQRLEELRPSISTEQSWVLRQNGTESLP 120

Query: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180
            S+VP RGR+YHETYGCQMNINDMEVVLSIMK AGY ETVD PETAE+IFINTCAIRDNA
Sbjct: 121 ASDVPSRGRVYHETYGCQMNINDMEVVLSIMKKAGYGETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR+WKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRQWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EV+ELYREGVKEVTLLGQNVNSYNDT +N D+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVKELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDM 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PE+VKQRRLTELIE FRNSTG+CYD 
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEV 600
           QIGS+QLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RK  +GDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAVVGDFVEV 600

Query: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 631
           RISKSTRASLFGEALA+TKLSSFYN MDESIACVS
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNRMDESIACVS 632

[Close]

BLAST of CmoCh11G015260 vs. ExPASy TrEMBL
Match: A0A0A0KDY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411190 PE=3 SV=1)

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 560/635 (88.19%), Postives = 584/635 (91.97%), Query Frame = 0


Query: 1   MGLHVLISPPFSSSTSIIFKPTSSASLLFKFGYAL-----SKSPSSTTTYLRPSSLKYVA 60
           MG HVL +PP SSST+I FKPTSS+S LFKF Y L     SKS SS+ +Y  PSS  YVA
Sbjct: 1   MGFHVLRAPPLSSSTTIFFKPTSSSSFLFKFRYPLYSPPFSKSSSSSISYFLPSSPNYVA 60

Query: 61  SPPTSIPLSGYFSRRTRRFHGGFIAATAAPGSVQKSEELRPSVSPDQSWVQRQNGIEPLT 120
           SP T+I LSG FSR TRRF GGFIAA  A GSVQ+SEELRPS+S +QSWV  QNG E L 
Sbjct: 61  SPTTAILLSGSFSRSTRRFRGGFIAAATASGSVQRSEELRPSISSEQSWVLGQNGTESLP 120

Query: 121 GSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAIRDNA 180
            S+VPL GR+YHETYGCQMNINDMEVVLSIMK AGYSETVD PETAE+IFINTCAIRDNA
Sbjct: 121 ASDVPLSGRVYHETYGCQMNINDMEVVLSIMKKAGYSETVDTPETAEIIFINTCAIRDNA 180

Query: 181 EQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMVDVVC 240
           EQKVWQRLNYFWFLKR WKSNVA GRSQSRHPPKVVVLGCMAERLKDKILD+DKMVDVVC
Sbjct: 181 EQKVWQRLNYFWFLKRNWKSNVATGRSQSRHPPKVVVLGCMAERLKDKILDSDKMVDVVC 240

Query: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCNNMCS 300
           GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRI+KNSVTAFVSVMRGCNNMCS
Sbjct: 241 GPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRIAKNSVTAFVSVMRGCNNMCS 300

Query: 301 FCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPGTNWK 360
           FCIVPFTRGRERSRPVESIV EVRELYREGVKEVTLLGQNVNSYNDT +N D+EPGTNWK
Sbjct: 301 FCIVPFTRGRERSRPVESIVCEVRELYREGVKEVTLLGQNVNSYNDTTENADIEPGTNWK 360

Query: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKHNICK 420
           LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRD+HNICK
Sbjct: 361 LSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDRHNICK 420

Query: 421 SIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480
           SIHLPAQSGNS VLERMRRGYTRE YLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD
Sbjct: 421 SIHLPAQSGNSIVLERMRRGYTREAYLDLVHKIRSIIPDVGITSDFICGFCGETEEEHAD 480

Query: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQCYDM 540
           TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDD+PE+VKQRRLTELIE FRNSTG+CYD 
Sbjct: 481 TLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDIPEEVKQRRLTELIEAFRNSTGRCYDS 540

Query: 541 QIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHRDGDYDGQRKVAIGDFVEV 600
           QIGS+QLVLVEGPNKRAPETEMIGKSDR HRVSFVNVAVPHRDGDYDG RK  +GDFVEV
Sbjct: 541 QIGSVQLVLVEGPNKRAPETEMIGKSDRSHRVSFVNVAVPHRDGDYDGHRKAMVGDFVEV 600

Query: 601 RISKSTRASLFGEALAVTKLSSFYNSMDESIACVS 631
           RISKSTRASLFGEALA+TKLSSFYN MDE IAC+S
Sbjct: 601 RISKSTRASLFGEALAITKLSSFYNGMDEPIACMS 635

[Close]

BLAST of CmoCh11G015260 vs. TAIR 10
Match: AT4G36390.1 (Methylthiotransferase )

HSP 1 Score: 829.7 bits (2142), Expect = 1.6e-240
Identity = 403/513 (78.56%), Postives = 450/513 (87.72%), Query Frame = 0


Query: 112 EPLTGSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSETVDVPETAEVIFINTCAI 171
           E    S++  +GRIYHETYGCQMNINDME+VL+IMKN+GY E V  PE+AEVIF+NTCAI
Sbjct: 118 ESTLDSDIASKGRIYHETYGCQMNINDMEIVLAIMKNSGYKEVVTDPESAEVIFVNTCAI 177

Query: 172 RDNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLGCMAERLKDKILDADKMV 231
           R+NAEQ+VWQRLNYFWFLKREWK N A GR++S  PPKVVVLGCMAERLKDKILD+DKMV
Sbjct: 178 RENAEQRVWQRLNYFWFLKREWKVNAATGRAKSLKPPKVVVLGCMAERLKDKILDSDKMV 237

Query: 232 DVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSVMRGCN 291
           DVVCGPDAYRDLPRLL+EVDYGQKGINTLLSLEETYADISPVRIS+NS+TAFVSVMRGCN
Sbjct: 238 DVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISENSITAFVSVMRGCN 297

Query: 292 NMCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLGQNVNSYNDTIDNTDVEPG 351
           NMC+FCIVPFTRGRERSRPVESI+ EV EL+  GVKEVTLLGQNVNSYND  D+ D E G
Sbjct: 298 NMCAFCIVPFTRGRERSRPVESIIREVGELWESGVKEVTLLGQNVNSYND--DSADRESG 357

Query: 352 TNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDEFLYLMRDKH 411
            NW+ S+GFS+  KVK MGLRF+DLLDRLS EFPEMRFR+TSPHPKD+PDE LYLMRD+H
Sbjct: 358 ANWEYSEGFSSRCKVKNMGLRFADLLDRLSVEFPEMRFRFTSPHPKDYPDELLYLMRDRH 417

Query: 412 NICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHKIRSIIPDVGITSDFICGFCGETEE 471
           NIC  IHLPAQSGNS +LE+MRRGYTRE YLDLV KIRSIIPDV ITSDFI GFCGETEE
Sbjct: 418 NICNLIHLPAQSGNSRILEQMRRGYTREAYLDLVKKIRSIIPDVAITSDFITGFCGETEE 477

Query: 472 EHADTLSLINEVGYDMAYMFAYSMREKTHAHRNYVDDVPEDVKQRRLTELIETFRNSTGQ 531
           EH +TLSL+  VGYDMAYMFAYSMREKTHAHRNY DDVPE+VKQRRLTELI+ FR +TG 
Sbjct: 478 EHQETLSLVRAVGYDMAYMFAYSMREKTHAHRNYTDDVPEEVKQRRLTELIDAFRETTGP 537

Query: 532 CYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGHRVSFVNVAVPHR----DGDYDGQRKV 591
           CYD Q+GS QLVLVEGPNKRAPETE+IGK+D+GHRVSFV   +  +    DGD D +R  
Sbjct: 538 CYDSQVGSTQLVLVEGPNKRAPETELIGKTDKGHRVSFVTKPLFDKACLLDGD-DLKRNP 597

Query: 592 AIGDFVEVRISKSTRASLFGEALAVTKLSSFYN 621
            IGDFVEV+I KSTRASLFGEALA++K+S F++
Sbjct: 598 GIGDFVEVQIEKSTRASLFGEALAISKMSLFHD 627

[Close]

BLAST of CmoCh11G015260 vs. TAIR 10
Match: AT1G72090.1 (Methylthiotransferase )

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-34
Identity = 128/525 (24.38%), Postives = 222/525 (42.29%), Query Frame = 0


Query: 95  RPSVSPDQSWVQRQNGIEPLTGSEVPLRGRIYHETYGCQMNINDMEVVLSIMKNAGYSET 154
           R S  PDQ     ++ + P    ++P    IY +T+GC  N +D E +   +   GY+ T
Sbjct: 37  RISSKPDQITASNRDSLAP-PSMKIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALT 96

Query: 155 VDVPETAEVIFINTCAIRDNAEQKVWQRLNYFWFLKREWKSNVAIGRSQSRHPPKVVVLG 214
            +VPE A++  INTC ++  ++  +                +  I R +S   P +V+ G
Sbjct: 97  -EVPEEADLWLINTCTVKSPSQSAM----------------STLITRGRSGKKP-LVIAG 156

Query: 215 CMAERLKD-KILDADKMVDVVCGPDAYRDLPRLLDEVDYGQKGINTLLSLEETYADISPV 274
           C+ +  +D K L+   +V V       + + R+++ V+   KG    L   +T   +   
Sbjct: 157 CVPQGSRDLKELEGVSVVGV-------QQIDRVVEIVEETLKGHEVRLLTRKTLPALDLP 216

Query: 275 RISKNSVTAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVSEVRELYREGVKEVTLLG 334
           ++ +N+    + +  GC   C++C     RG   S  V+S+V  VR +  EGVKE+ L  
Sbjct: 217 KVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVISEGVKEIWLSS 276

Query: 335 QNVNSYNDTIDNTDVEPGTNWKLSDGFSTIAKVKKMGLRFSDLLDRLSTEFPE-----MR 394
           ++  +Y                           + +G+    LL+ +  E P      +R
Sbjct: 277 EDTGAYG--------------------------RDIGVNLPILLNAIVKELPSDQSTMLR 336

Query: 395 FRYTS-PHPKDFPDEFLYLMRDKHNICKSIHLPAQSGNSTVLERMRRGYTREVYLDLVHK 454
              T+ P   +   E   ++R    +   +H+P QSG+ +VL  M R YT   +  +V  
Sbjct: 337 IGMTNPPFILEHLKEIAAVLRHP-CVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDT 396

Query: 455 IRSIIPDVGITSDFICGFCGETEEEHADTLSLINEVGYDMAYMFAYSMREKTHAHR-NYV 514
           +  ++P + I +D ICGF GET+E+ + T+ LI +  +   ++  +  R  T A +   V
Sbjct: 397 LTELVPGMQIATDIICGFPGETDEDFSQTVELIKDYKFPQVHISQFYPRPGTPAAKMKKV 456

Query: 515 DDVPEDVKQRRLTELIETFRNSTG-QCYDMQIGSIQLVLVEGPNKRAPETEMIGKSDRGH 574
                  + R LT + E F   TG +C + +I                E    G    GH
Sbjct: 457 QSKIVKQRSRELTSVFEAFAPYTGMECREERIW-------------ITEVATDGIHLVGH 487

Query: 575 RVSFVNVAVPHRDGDYDGQRKVAIGDFVEVRISKSTRASLFGEAL 611
              +V V V   +          +G     RI+   R S+FGE +
Sbjct: 517 TKGYVQVLVTGPES--------MLGTSAMARITSVGRWSVFGEVI 487

The following BLAST results are available for this feature:

BLAST of CmoCh11G015260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H0V1	2.2e-239	78.56	CDK5RAP1-like protein OS=Arabidopsis thaliana OX=3702 GN=At4g36390 PE=2 SV=1	[more]
Q2R1U4	1.4e-238	75.33	CDK5RAP1-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0592800 P...	[more]
Q9JLH6	4.6e-144	52.88	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 ...	[more]
Q9VGZ1	2.3e-143	52.20	CDK5RAP1-like protein OS=Drosophila melanogaster OX=7227 GN=CG6345 PE=2 SV=1	[more]
Q8BTW8	3.9e-143	53.36	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cd...	[more]

BLAST of CmoCh11G015260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EIA8	0.0e+00	100.00	CDK5RAP1-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434491 PE=3 SV=1	[more]
A0A6J1JMU5	0.0e+00	97.78	CDK5RAP1-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486642 PE=3 SV=1	[more]
A0A5D3CNB2	0.0e+00	88.98	CDK5RAP1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49...	[more]
A0A1S3BLE1	0.0e+00	88.98	CDK5RAP1-like protein OS=Cucumis melo OX=3656 GN=LOC103491318 PE=3 SV=1	[more]
A0A0A0KDY2	0.0e+00	88.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G411190 PE=3 SV=1	[more]

BLAST of CmoCh11G015260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36390.1	1.6e-240	78.56	Methylthiotransferase	[more]
AT1G72090.1	1.8e-34	24.38	Methylthiotransferase	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006638	Elp3/MiaB/NifB	SMART	SM00729	MiaB	coord: 280..520 e-value: 3.3E-53 score: 192.8
IPR013848	Methylthiotransferase, N-terminal	PFAM	PF00919	UPF0004	coord: 124..236 e-value: 2.5E-30 score: 104.4
IPR013848	Methylthiotransferase, N-terminal	PROSITE	PS51449	MTTASE_N	coord: 123..252 score: 37.687183
IPR002792	TRAM domain	PFAM	PF01938	TRAM	coord: 536..610 e-value: 1.4E-13 score: 50.6
IPR002792	TRAM domain	PROSITE	PS50926	TRAM	coord: 534..611 score: 14.733335
IPR038135	Methylthiotransferase, N-terminal domain superfamily	GENE3D	3.40.50.12160		coord: 124..265 e-value: 1.6E-38 score: 133.3
IPR023404	Radical SAM, alpha/beta horseshoe	GENE3D	3.80.30.20	tm_1862 like domain	coord: 278..534 e-value: 4.3E-82 score: 277.1
IPR005839	Methylthiotransferase	TIGRFAM	TIGR00089	TIGR00089	coord: 124..607 e-value: 1.4E-113 score: 377.8
IPR007197	Radical SAM	PFAM	PF04055	Radical_SAM	coord: 284..480 e-value: 9.3E-35 score: 120.5
IPR007197	Radical SAM	SFLD	SFLDS00029	Radical_SAM	coord: 123..615 e-value: 0.0 score: 679.7
IPR007197	Radical SAM	PROSITE	PS51918	RADICAL_SAM	coord: 276..531 score: 35.201977
None	No IPR available	TIGRFAM	TIGR01574	TIGR01574	coord: 125..608 e-value: 3.9E-116 score: 386.6
None	No IPR available	SFLD	SFLDF00413	CDK5RAP1	coord: 123..615 e-value: 0.0 score: 679.7
None	No IPR available	SFLD	SFLDG01082	B12-binding_domain_containing	coord: 199..495 e-value: 4.5E-28 score: 92.8
None	No IPR available	PIRSR	PIRSR000167-1	PIRSR000167-1	coord: 418..505 e-value: 0.0037 score: 14.4
None	No IPR available	PANTHER	PTHR43020	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1	coord: 106..621
None	No IPR available	CDD	cd01335	Radical_SAM	coord: 288..513 e-value: 2.14497E-9 score: 55.8025
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 274..528
IPR006463	tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB	SFLD	SFLDF00273	(dimethylallyl)adenosine_tRNA	coord: 124..611 e-value: 0.0 score: 538.0
IPR020612	Methylthiotransferase, conserved site	PROSITE	PS01278	MTTASE_RADICAL	coord: 284..304

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015260.1	CmoCh11G015260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity
biological_process	GO:0035600	tRNA methylthiolation
biological_process	GO:0006400	tRNA modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0035597	N6-isopentenyladenosine methylthiotransferase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0035596	methylthiotransferase activity
molecular_function	GO:0016740	transferase activity