CmoCh11G015180 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015180
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	GCV_T domain-containing protein
Location	Cmo_Chr11: 10771268 .. 10780265 (+)
RNA-Seq Expression	CmoCh11G015180
Synteny	CmoCh11G015180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGATTGGAGTCGATTCAGACAACTATGGCTTCTTACTGGAGCTATGGATTCTCCGTCTCAGATGCTGCGATTCCCTCTACTAGCAGAGCCTTCATCTCCAATCCACGGCCATGTCGTCTACGGCTCCCTGCATTTCGACCTCGGAACATTAGGAAGCCCCATACCAAAGCGAACAGAATCAGAACTTCCTTTTCTGCATTGCCTTTCGACCTCTCCCCTCCTCCGATCGACGAGGACCTTCTTGTAAGTTTCTTTCCTCCTTTTATTTCACTTTGTTGATATGTTTACTTCGGTAGAAACTAGAGAGGAGGGAGAAACAATCGCCAAATGATTTTGTTTTGAGACTGATGTTTATAATCGGTGCTTGCGGAGGCTGTTTGTTGTTGTTGTTGTTGTTGTTATTATTTTTTTGCTGAAATTGTTTCAACTGATTTGGCTCTGTCGTAAAAAGTGGAATGAGACGCTATTGTTTATTGACATGTTGGAGTTATGATATTTTAACTGATGACATGAAGACATATGCATTTAAATTAGGGAAGAGGAGGAAAAAGAAAGAAAGCAATGTGCTAGTATGCTTGATTTCAGAGAAATGATTCTCAAATCTTGTTCGGAGATTGAGAACCAACCCTCGTTTTCCTTTTCAGACGGCGGTTAAGACTGTATTATTGCTAACAGTTGTTTTATGTGCTAAATTCCAATTGAAATGTTAGAACTTGCAATACTCTAATTTAGATATCTATGATGGACAGGAGGCTGCAACGACTGAAGGTGCGAGGATTTCTGATGATGGGATTATTGAAACTTTTCATAATGATGATGAAGCGCTGGATGCAGCCAATAATGGGGTTGCAGTATGTAGTCTTTCAGCGTTTTTCTTACTGGTGTCATTTTTCTTTTTGCTTTGTTTAGTTTGAGAACTTTTTATAGCTACCTTTGGAAAGAAAACACTGTTTATATTCATATCTAACTGTGTTAATTTGGTAATATTCTCAAATATATGAAAACATTTCTAAATTGCTATTTGTCTGAATTACAATATGCCAATTAATTCTTTAGTACCCAAATGAAGTCAGAAGATGGATGGATGAATTAGAGGCAGTACAGTGTGCTGTAGAAGTCTAGATGGTAATAATTTTCATAAGATGGTCAATTAGAAGCTCTCCTCAAATATCGCACGTGTTACGAGAGTTAGCTTTTTGACTGTTAGGCAAGACCATTAAGTTTGTGAGGAATAGTAAACTTTTGATAGGCCTTTTTTTTTTCCTATTGTTTATCTTCCTATCTCATAGGGTAAATTGTCACCTCTTTTATTAATTTTTATAGCTACTCTACACTTTTGTTCAATTGGAGAAGTTTCTTGTAACTAGCATAGAGTGGAGGTTTTCTCCCTGTTTTTGTAATTTCATATTTCAATGAAATTGTTTCTTAGAAAAAACAAAAGTTATATCCTTCACGGTTGATTTTTGTTCTTATGTTGTTAATTGTTAGGTTGTGGATCTCTCTCATTTTGGCCGAATAAGAGGTACATTCTCTTCTTGCTGTCTAATTTTTTGTTGCACTATTATTTATGAGTTTGATCCTACAGAAGGCGTATAAAAGTTTTGCCGCCATCCTTTAAAGCATTCCATGTAATAATATGGAGATTTATGGCTGCTTATGATTTTTGCTTTTCAAGCTTTAGCTTAAAAATAATAATAATAGAATGATAAATGATGTATGTGTATATGTCTTTGCTCCTTCTTTGAAATAACATGGCTTTGGTGGCCCATTCTTTCTTAAATGACCTCATATTGTAAAAGAAAAAAGATCTTCTAACAACATGAATACATTACAATTGAGTGTGAAAGAAATGAAAAAATATTTTAAGTTGAGTGATTTCCCCACCCCCCCAAGGGATAACGTTGGTGGCAGGGGGTTGGTGTGTTTAGAAATTCCCTTCAAGGTTTTAGGTTCAAGCCCCTTGGTGGAAAACTCAATAATTGAAATCCTTGTTGTATCTTTGAGCTAGCCTTGGGTGAGTAGAATATGTGCAAAATTCACTGCGCAAGAATATATTAATTAATGACAAATACTAACTAATTCTAATGCAATTAAGCCCTCAAGAATTCTACAAAATGTAGACTTAACAGCAAGATAATTAAATTCTAGCAATCCTGAAGTATGGAGCTAAAATTACACAATGATTAAAACATGAATCAATCAGCAAAGGTTCTGGAATTGGCAGAAATCCTAATTTTATTTTTAGGTCTCGGTTGTTTTTGCAATGATATGGCGTGTTGCAGAAATACTGTGGAACTGATGAAATGCTGTAGCATTTGTGCAGCAATAGTGCGCAGTGAACTAACAAAATTATCAAATTAATTTTCAAAAACTATTTCTAATTCGTGAACTCCAGTTCTTAAGTCAAGATTAACACGTCTATGAAAGCCCAATATTAAGAACATGTGATTAGGTCCAATTTTCTAAGTATACAAGCCAAAAGTATATGCCTGTACCTTTGATCTACCCCTTATTCAAGACATGAGCCTATTTTTGGACAAGAGACAAACTTTCCATTGATATAAGAAAGCTAGCCTATTCTCCACTTGTACTTGAAACCTGTCCTCCAATGGACCTGGTCCATGAAACCACAGGCCACATGATCACAACTCATGTGCCTTCAAGATCACATCGTCTTCTTTCCTAGCCTTATAATCCTCAATGGACTTTGTTTGCAATCAAGACTTCATTGAGCATTTGTCCACCAGATATAAGTGTACTTTAATGTCCTAAAATAGTTTAATTGTCCACCAGATATAAGTGTACTTTAATGTCCTAAAATAGTTTAATTGTCCACGAGATATAAGTGTACTTTAACGTCCTAAAATAGTTTAATGCACAACTTTCTTAAATCAAATTTTATGCAGTCATCTTCTGTACTGAACTTCTCATGCTTCTCAACCGGTGGTTGAGATTTTCCCACAAATCTTGAATACTACAGTATTTAGTGCTTTTGCAACCGTTTTTCTTATGAAACTGATGCATTAATGTACATGAAGTTAGTGGAGAAGATCGTTATCAGTTTCTTCAGAATCAAAGCACAGCTAATTTTGAAAGTCTCTGTCAAGGACAAGTAAGTTTCAAATAGGCATATCCTATTCTAATCATGTTTGGTTATATTTAAATTCTTTTATAATGGATTTATATTGATTTAAGATTGATGTTTTATGTTTTTTTCTGTTAACTACAGGGATGCAGTACTGTGTTCGTTACGCCCACTGCTCGGACAATTGATATTGCACAAGCATGGATCATGGTAATGCTGTCAAATAGTATTTCTCCATGGTCCATGGTTTTCTATATCATAACTTGTTCGATTTCATTCTAATATTCATTTTTTATACATTGTGTTAACAGAAAAATGCCATCACATTAATTGTTTCGCCAGTGACCCGTGAAAGCATAATTCAGATGCTCAACAAGTAGGTGTTCTTGTAAGTTTTTAATTGCCCCTTCATGGGTGTTGTGCTTTTTTCTTCTCGACTATAAGTATCCTTGCACTAGAACCATAACTTGAGAGTAGTAATTACGAAACATCAAGACCACAATTAAAAATTACATACAAACTGAAAAATTACAGGAAGGCCTCCCAACCAGAATTAATCTCAAAAGATGGGTAATTGGGAAAAGCTCCAGACAGCTCTCCAAGAAACTGGATGGGTCTTTATCAAAGATGAGCTTTCCACCCAAGGGATCCTTCTATTTCCGAAAACCTCCATCTTTTAAACCAAATCCCCCAAACTACAGATTTAACAAGAGAAACCCATAAAACTGTTGCCTTCTCCAAGGGCGTGACTGGTAGGAAGATTAAAAATATTAAAATTTACCTAAAATTGCCCAACATCGAAGATTGAAAGGAAGCATCCCACGTTAACACTCTTAGAGCATGAAAACTTATCAACCTTTTGACGTGATAATTAAAAATTGCGTTGAAAACAGATTGGAACAAGCTGATTTCCAATCCAAGAGTCTTTATTATTATTATTTATCTTTTAAAAAAATAAAAAGGAAAAATCCAAAAGGCTTTCCAGAAAGAATTTTCTCACCACTGCCTACCATGGTCAAGGGAAAACTTATCATAAATATTTCTAAACTATATCACGTTCCACCAAGGGCTTCCATAGCTTTCACGTATATTTATTTTTGTGCATTACCCGGAAACTTCTTTCATGGACACCCTAGCCACCACGTAATGTCACAGTTCACTTGATTTAAATCCTCTTTGTGGGCTTCACACTCTCAAGCTTTTTGTAAATTTTTTGTTATTATTAGCCAGGTGATTATTTCAGATTGGACCCTCTTTCTAAGGTTTATTTGATTGGTCTTTTCCTGTTGGGCTGTTTTTTTTTTTGTCTTTGTATATTCTTCCATATGCCCTTTCTCATAATAAATAAGATTTTTTTTGTTTACATTATTTATTTACATGGAAACAATATTTTTTATTGATAAAATAAAATGAGATATTGCAAAAATAGTTGCAATTCATTTGCATTTGGAAATCAAATCTTCAAAGCCGTTTGATTAAAAGAACTCCATTCTTCTTCCTTTAGTTTTCAAACCCTAACCCATCATCCTCCGAAGGATCAACTACAGAATTCCATCCAATAAAATGTGATATCTTTTAGGCACCGTGAATTTTCTGATATGGTTTGGTATTTCTATCTGCACTTAACAGAAACACAAAAAGAGACTATAATAAACTGGAAGATTGGGTCACACCAAATTGCGTAAACACTTTCCGTCTACGACTTTTGCAGAATGCATAAACATAAGCTGAATACTTTATTGCATGGGGAATAGCTTCTATTCATCTTGATTTGCAGATAATTCCTTGGAACACCATTGTGAAAAGGATTTGAGTACACAGTTTCATGTTAAACTATAGTGTCATATAGGTTGATGAAATTGAGAGTTTCAGAAATTTATTTCATCCATTGGTCCAACTTAAGATAGGAAAACAACATAATTTATTTGATTATTCTAAGGAATGTTACACGGACTTTCCATTATTTATTTATGGATCTATATTTATTGTTTATATATGTAAGAAAACCTTGTATTTGATTTGAATATAAAAAAAATACAATATCTTTATTGCTTCCTAAACTCAAGTTGGCATAAGAGCAGCAAACGAAATGTGGTGTAAAAACACAATATCTTTATTTCTTCCTAAACCACTCTTTCTCCAAATTGGTGTCCATTGTGCAAGAAAGGCAACAAATCACAAAGCCACTTACTTGCATGACATCTCACATCTCACATATGCTAAGAATTTTTGGACAACGATTCTCAATATATTTGTATGACATCTCACATTTCCTAGAGAGGTAAAGGATCTATTAAACATGACCTTAACGTACCACCCTTTCAAGAATACAAAAGTCTTATTGTGGAAAAATCTCATCATGACTTTCCTTTGGAGTCTGTAGAAAGAGAAGAATAAAAAAATATTCGCAAAAAAAATTTCTACAAAACTTGTCGACAATGTTGTTGACCAAGCTATATCTTGGTGTAAACTATCTAATATTTTTACTTCCTATAGTTAGACCTCCCCCATTGTAAATTGGGATGGTCTTTTGTAAATATCATGGTTCTATATTTATTAACTTGTATTATAGTTCTATATTTATTATTTATATTTGTGATATTTTTCCTTATTGGTAGAGGATCTTTGTTCTAAATAAGAAGACCTTGTATTTGATTTGAATATAGAAGAAATACGATATCTTTACTTCGTCCCTGAATTCGTGTCTATGGAGGCTAAAACGTATTAAGTTGCACACGTCTTTGAATATATATTATGTCATATATTTGTGTGTATATTTGATTTATGCATATAAGTTGTTTTTTTCTTTTCTATGTATACCATTTATTATTCGTAAGTTTACAAAAGAATTTTTTACTAGGTACATATTTTTGGCGGACAAAGTAGAGATTCAAGATATTACCAAGCAAACATCATTGTTGGTGTTGGTGGGACCTAAAAGTAACCAAGTAAAAGAGCACTATGCAGTTTTCATGTACAAGCAATATTGTTTTTATTCTTATTTCTGGTTTTCACGTACTAATTTTTGAATTAACCCTCAAATGCAAGCAGATCATGGAGGCTTTGAACCTTGGTAGTATAGCTGGAGAACCATATGGAACACATCAGCACTTTAGTGTAAGCTTTTATTTCTAATTAAAGCTATCTAGCATTACTTTCCTTTCTTTTTCTAATGAGAATCAATGTTAAAATATTGAGATGTGACAGAAACACTCCCCTAACATTCAAGGGGCGACAAAAACTTATTGAAAAATTAATTATAAAAGCTCTTTTGTTCTAGCATTACTAATCTGGATTTAAATTACACAGTTTGGAAATATGTAGATGTTACCAATGAAATTTGGAATCTTATTGTGCAGGTTAATGGTATGCCAATTACCGTTGGGGTGGGAAATATCATTTCTGAAGAAGGTTTTTCACTGTTGATATCACCTGCTGTGTCTGGATCAGTATGGAAAACTCTAGTTTCTCTAGGCGCTGTTCCAATGGGCTCAGACGCATGGGAAAAGCTGAGGATATTTCAAGGTGTACATCCCTCAACCTTTTTCTGCTCTTTGGTGTTCTGGTTCAATGTTGTTTTGTGCACTTGAAATTTTAGTGCCTTATGTGAATTTTGATCAATATGATCCTTTACTGTGGACACTGTTAATCTGTAGTTGTGACTCAACAAGCATCCTGACGTGATAATCTAATTCAACGTCTAAACTATTTTTGACGCTTTACCTTTTTTTTTTTTTTTTTTCTGTTCATTTCTAACTGGGAGTATGTTTAATCAGATGCCTAATCTTTCCAAAGGTGTATGAACTAAAGAACTATAATAGCTTAAAGAATACTCTAGGTTCATTCCATAGATGTTTAAGCATTATCAATGAGATTTTTTTTTATTAGACTCTCTATCAACAGCGCCAGTGCTATTCTCCATCTTGGTACTAGTTGGCCTGAGTTGTCAACGGTTTGCAGACATCTCTATGCGTTAACAATTCATCTCTATGGATGGATACTCCTTTCTTGTTTAGTTGGGTGTGGGTAATTTTTACTTCCTGTCCCACCGTCAGTTTGTGGTTTGTATGTTGGAAGAAAAGTTTTTTCTCTGAAGGCGGTAGACTTACCATCCGTTGGTTTTGAGTTGTGTCTCGACTTATTTTCTCTCTTTGTTTAGGGTCACCAATCTGATCAATAGAACTTTGGAGAAGCTTATGAGGGATTTCTGATGGAAGGAGGTTTATGAGATCTCAATCAGAGTGTGGGATGTGGAGGCTAAGCCATTGGATCTTGGTGGGTACAGGCAATTTAAGGGCACGAAATGAGGCCTTGTTATTTAAATCGTCGTACTGCTTTTTGCAGGAGCCTAGCACCTTATGGAATAAGGTCATTGTAAACAAGTATGGACCCGTTGTTTTGAGTGGATTTTAGGTGGGTCTTTGTAAGACAATTCAAGAAATCCATGGAAAGCTATCTTTGTTGGGCTTCTCTTTTTCTTTTAGTTTGTTCATTGGTCAAGAGTGATGAGTTTGATACATTTGGGAGGATAAGTGGTTGGGAGATACACCATTTTTGCTCTTTGTTTCCTTGATTATACCATTTTTCTTCTATGAGGATTCCCTTAGTAGCGTCCGTTCTTCCTACTTCTTGGAGATCTTTCTTGATTATACCATTTTTCTCTCAATATCTGTGGATGTAGCCAAGTCTTAATTTGCTTGATTGGAGCTCCTGTGATACCGTGAACTCTTGTATCACTTGATAATTTGAGTAAGTTTTGCAGGTATGCCAGCTCCTCAGAAAGAGCTTACTGACGAGTTCAATGTACTCGAAGCTGGTCTTTGGAATTCAATTTCTCTCAACAAGGGTACTCATTTCTTGCCATAAAATTTCATCACACACCTAGCATGGATCGATTATTCAATTTTTAATCTCTGTAGGTTGTTACAAGGGACAAGAGACCATATCTAGACTAATTACATATGATGGAGTAAAACAGAGATTATGGGGACTTCAACTATCAGATTCAGTGGAACCTGGCAGCCCAATAACTATTGATGGGAAAAAGGTAGCTATTTGCATTTTTTAATATGGACCATCGCTGGTGCGATACTCACTTCTCAGCGACAAGTGAGTTAAGCCAATTCGTTTGTGCGTTGCCTACGGCCAGACAACGTATGCTCGAGCCTCTGGCCCTGATTTAAGTAGAAGGTTTTAGAAAACGGGAGCAGAGAGATTTTTGAAAGAGAGTTTAAAAGCAAGATTTAGTGAGAGATTAAAAACGGTGTTATATAGCATGCAAGCAAAGGCAACAACAACGGCTTAGCAGTATATAACTATTCGGGTAGGGAATATTATGTCAAACCCCAACCAATTCATGAACCTCTTTTTCCTTTCTCAAGAGTGATTTCATAGGCTTTATGAAACTCCTAAGAGCTGTCACCGAAGAATTTCTGCCCTTTGCCTCTGCATGAGCATGAAATTTCTGAACTGCATGACCATGTTTTAGGTTGAATATGTATACGTTTTGATTGAAATTGTGTGTAGGTGGGAAAGCTGACAAGCTATACACCAGGAAGAAAAGGGTTGGAGCATTTCGGTCTTGGCTACATCAAGAAGCGAGCTGCTTCCTGTGGAGACACAGTAATTGTTGGAGAAAACACCATTGGTAGGGTCGTTGAAGTTCCCTTTTTGGCTGGACAACCACCACTGTCCAACAGCTCAAGTAACTTGCCTCGACGTAGTGTACAATAATTGTTGCTAGTTCATTGTTCTTGATCCAATGCTCTATATTTCTTTTAATAATGTTTAGATACAGATACTTAGACTGATGGTTTTGGAACCCTGTTTGTGCATATCATCGGGGTTTGCTTGTAGTTCAACTGTATTTACAATATCAAACCACTTTTTTTTTTTTTTACTATTTGCCTAG

mRNA sequence

TCGGATTGGAGTCGATTCAGACAACTATGGCTTCTTACTGGAGCTATGGATTCTCCGTCTCAGATGCTGCGATTCCCTCTACTAGCAGAGCCTTCATCTCCAATCCACGGCCATGTCGTCTACGGCTCCCTGCATTTCGACCTCGGAACATTAGGAAGCCCCATACCAAAGCGAACAGAATCAGAACTTCCTTTTCTGCATTGCCTTTCGACCTCTCCCCTCCTCCGATCGACGAGGACCTTCTTGAGGCTGCAACGACTGAAGGTGCGAGGATTTCTGATGATGGGATTATTGAAACTTTTCATAATGATGATGAAGCGCTGGATGCAGCCAATAATGGGGTTGCAGTTGTGGATCTCTCTCATTTTGGCCGAATAAGAGTTAGTGGAGAAGATCGTTATCAGTTTCTTCAGAATCAAAGCACAGCTAATTTTGAAAGTCTCTGTCAAGGACAAGGATGCAGTACTGTGTTCGTTACGCCCACTGCTCGGACAATTGATATTGCACAAGCATGGATCATGAAAAATGCCATCACATTAATTGTTTCGCCAGTGACCCGTGAAAGCATAATTCAGATGCTCAACAAGTACATATTTTTGGCGGACAAAGTAGAGATTCAAGATATTACCAAGCAAACATCATTGTTGGTGTTGGTGGGACCTAAAAGTAACCAAATCATGGAGGCTTTGAACCTTGGTAGTATAGCTGGAGAACCATATGGAACACATCAGCACTTTAGTGTTAATGGTATGCCAATTACCGTTGGGGTGGGAAATATCATTTCTGAAGAAGGTTTTTCACTGTTGATATCACCTGCTGTGTCTGGATCAGTATGGAAAACTCTAGTTTCTCTAGGCGCTGTTCCAATGGGCTCAGACGCATGGGAAAAGCTGAGGATATTTCAAGGTATGCCAGCTCCTCAGAAAGAGCTTACTGACGAGTTCAATGTACTCGAAGCTGGTCTTTGGAATTCAATTTCTCTCAACAAGGGTTGTTACAAGGGACAAGAGACCATATCTAGACTAATTACATATGATGGAGTAAAACAGAGATTATGGGGACTTCAACTATCAGATTCAGTGGAACCTGGCAGCCCAATAACTATTGATGGGAAAAAGGTGGGAAAGCTGACAAGCTATACACCAGGAAGAAAAGGGTTGGAGCATTTCGGTCTTGGCTACATCAAGAAGCGAGCTGCTTCCTGTGGAGACACAGTAATTGTTGGAGAAAACACCATTGGTAGGGTCGTTGAAGTTCCCTTTTTGGCTGGACAACCACCACTGTCCAACAGCTCAAGTAACTTGCCTCGACGTAGTGTACAATAATTGTTGCTAGTTCATTGTTCTTGATCCAATGCTCTATATTTCTTTTAATAATGTTTAGATACAGATACTTAGACTGATGGTTTTGGAACCCTGTTTGTGCATATCATCGGGGTTTGCTTGTAGTTCAACTGTATTTACAATATCAAACCACTTTTTTTTTTTTTTACTATTTGCCTAG

Coding sequence (CDS)

ATGGCTTCTTACTGGAGCTATGGATTCTCCGTCTCAGATGCTGCGATTCCCTCTACTAGCAGAGCCTTCATCTCCAATCCACGGCCATGTCGTCTACGGCTCCCTGCATTTCGACCTCGGAACATTAGGAAGCCCCATACCAAAGCGAACAGAATCAGAACTTCCTTTTCTGCATTGCCTTTCGACCTCTCCCCTCCTCCGATCGACGAGGACCTTCTTGAGGCTGCAACGACTGAAGGTGCGAGGATTTCTGATGATGGGATTATTGAAACTTTTCATAATGATGATGAAGCGCTGGATGCAGCCAATAATGGGGTTGCAGTTGTGGATCTCTCTCATTTTGGCCGAATAAGAGTTAGTGGAGAAGATCGTTATCAGTTTCTTCAGAATCAAAGCACAGCTAATTTTGAAAGTCTCTGTCAAGGACAAGGATGCAGTACTGTGTTCGTTACGCCCACTGCTCGGACAATTGATATTGCACAAGCATGGATCATGAAAAATGCCATCACATTAATTGTTTCGCCAGTGACCCGTGAAAGCATAATTCAGATGCTCAACAAGTACATATTTTTGGCGGACAAAGTAGAGATTCAAGATATTACCAAGCAAACATCATTGTTGGTGTTGGTGGGACCTAAAAGTAACCAAATCATGGAGGCTTTGAACCTTGGTAGTATAGCTGGAGAACCATATGGAACACATCAGCACTTTAGTGTTAATGGTATGCCAATTACCGTTGGGGTGGGAAATATCATTTCTGAAGAAGGTTTTTCACTGTTGATATCACCTGCTGTGTCTGGATCAGTATGGAAAACTCTAGTTTCTCTAGGCGCTGTTCCAATGGGCTCAGACGCATGGGAAAAGCTGAGGATATTTCAAGGTATGCCAGCTCCTCAGAAAGAGCTTACTGACGAGTTCAATGTACTCGAAGCTGGTCTTTGGAATTCAATTTCTCTCAACAAGGGTTGTTACAAGGGACAAGAGACCATATCTAGACTAATTACATATGATGGAGTAAAACAGAGATTATGGGGACTTCAACTATCAGATTCAGTGGAACCTGGCAGCCCAATAACTATTGATGGGAAAAAGGTGGGAAAGCTGACAAGCTATACACCAGGAAGAAAAGGGTTGGAGCATTTCGGTCTTGGCTACATCAAGAAGCGAGCTGCTTCCTGTGGAGACACAGTAATTGTTGGAGAAAACACCATTGGTAGGGTCGTTGAAGTTCCCTTTTTGGCTGGACAACCACCACTGTCCAACAGCTCAAGTAACTTGCCTCGACGTAGTGTACAATAA

Protein sequence

MASYWSYGFSVSDAAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALPFDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVNGMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITIDGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQPPLSNSSSNLPRRSVQ

Homology

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BLAST of CmoCh11G015180 vs. ExPASy Swiss-Prot
Match: Q681Y3 (Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g60990 PE=1 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 1.8e-152
Identity = 274/412 (66.50%), Postives = 321/412 (77.91%), Query Frame = 0


Query: 14  AAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALPFDLSPPPIDEDLL 73
           A +P      +   R   LR   FR R       +   +  S  +L FD SPPPID D L
Sbjct: 26  ALLPCLYNGTVLRRRSLSLRKCGFRERKF-----QLRCVSASSDSLQFDFSPPPIDHDFL 85

Query: 74  EAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQST 133
           +  +  G ++S+DG++E+F NDDEALDA +NGV VVDLSHFGRIRVSG+DR  FL NQ+T
Sbjct: 86  DTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHFLHNQTT 145

Query: 134 ANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRESIIQMLNKYIFLAD 193
           ANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T +SII+MLNKYIF AD
Sbjct: 146 ANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNKYIFFAD 205

Query: 194 KVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVNGMPITVGVGNIIS 253
           KVEI+DITKQT L  L GPKSNQIM  LNLG + G+PYG HQH+S +GMPITVGVG++IS
Sbjct: 206 KVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLIS 265

Query: 254 EEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGL 313
           +EGF++L+SP  + SVWKTL++ GA+PMGS AWEKLRI QG PAP++EL+ EFNVLEAGL
Sbjct: 266 DEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERELSKEFNVLEAGL 325

Query: 314 WNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITIDGKKVGKLTSYTP 373
           WNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+DGKKVGKLTSYT 
Sbjct: 326 WNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVDGKKVGKLTSYTG 385

Query: 374 GRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQ-PPLSNSSS 425
           G+ G  HFGLGYIKK+AAS G+TV VGE+  G V EVP+LA Q PP +NSSS
Sbjct: 386 GKNGSGHFGLGYIKKQAASIGNTVTVGEDISGIVSEVPYLARQHPPSANSSS 432

[Close]

BLAST of CmoCh11G015180 vs. ExPASy Swiss-Prot
Match: Q65HF9 (Aminomethyltransferase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=gcvT PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.7e-20
Identity = 82/338 (24.26%), Postives = 150/338 (44.38%), Query Frame = 0


Query: 92  FHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVT 151
           F +  E  +A      + D+SH G + ++G D   FLQ   T +  +L +G    T    
Sbjct: 30  FSSIKEEHEAVRTKAGLFDVSHMGEVEITGTDSLPFLQKLLTNDVSTLKEGGAQYTAMCY 89

Query: 152 PTARTIDIAQAW-IMKNAITLIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLV 211
               TID    +    N   L+++    +  +  +NK+I     V +++++ + +LL L 
Sbjct: 90  EDGGTIDDLLVYKKAANVYMLVINAANIDKDVDWMNKHI--KGDVSVRNVSDEIALLALQ 149

Query: 212 GPKSNQIMEALNLGSIAG-EPYGTHQHFSVNGMPITVGVGNIISEEGFSLLISPAVSGSV 271
           GPK+  I++ +    +A  +P+      +V  +   V       E+GF +      +  +
Sbjct: 150 GPKAEAILKQVADHDLAELKPFMFRDDAAVGSVQALVSRTGYTGEDGFEIYCRNEDAACI 209

Query: 272 WKTLVSL----GAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGLWNSISLNKGCYK 331
           WK L+      G VP G  A + LR    +P   +EL+ +   +EAG+  ++  NK    
Sbjct: 210 WKLLLETGKDSGLVPCGLGARDTLRFEAKLPLYGQELSKDITPIEAGIGFAVKTNKASDF 269

Query: 332 GQETISRLITYDGVKQRLWGLQLSDSVEP--GSPITIDGKKVGKLTSYTPGRKGLEHFGL 391
             + +       G  ++L GL++ D   P  G  +   G++ G++T+ T      ++ GL
Sbjct: 270 IGKAVLASQKEHGADRKLVGLEMIDKGIPRHGYAVYYQGEQAGEVTTGTQSPTLKKNVGL 329

Query: 392 GYIKKRAASCGDTVIVGE----NTIGRVVEVPFLAGQP 418
             +KK A +  DTV+  E        ++V+ PF   QP
Sbjct: 330 ALLKKEACAL-DTVVEVEIRNKRLKAKIVKTPFYKRQP 364

[Close]

BLAST of CmoCh11G015180 vs. ExPASy Swiss-Prot
Match: Q67N36 (Aminomethyltransferase OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX=292459 GN=gcvT PE=3 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 8.2e-20
Identity = 84/330 (25.45%), Postives = 157/330 (47.58%), Query Frame = 0


Query: 101 AANNGVAVVDLSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTI-DI 160
           A      + D+SH G   V G      +Q  ST +   L  G+    +        + DI
Sbjct: 42  AVREAAGLFDVSHMGEFEVRGPQALDLIQLVSTNDAAKLAVGRVQYALMCYENGTVVDDI 101

Query: 161 AQAWIMKNAITLIVSPVTRESIIQMLNKYIFLA--DKVEIQDITKQTSLLVLVGPKSNQI 220
               + ++   L+V+    +   + +N     A    +E+ D + + +LL L GPK+ +I
Sbjct: 102 LIYRLDEHRYWLVVNAGNTQKDWEWINTARERAGLHNLELIDRSAEIALLALQGPKAEEI 161

Query: 221 MEALNLGSIAG--EPYGTHQHFSVNGMP-ITVGVGNIISEEGFSLLISPAVSGSVWKTLV 280
           ++ L  G +    EP+   ++ +V+G+P + +       E+GF + +      ++W+ L+
Sbjct: 162 LQPLATGVVLSQLEPFSLAKNVTVSGVPTLVLSRTGYTGEDGFEIYVKAEDVAALWEALL 221

Query: 281 SL----GAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGLWNSISLNKGC-YKGQET 340
                 G +P G  A + LR    +P    E++D+ N LEAGL  ++ L KG  + G++ 
Sbjct: 222 EAGDEQGLLPCGLGARDTLRFEAKLPLYGHEISDQHNPLEAGLGFAVKLKKGVDFIGRDA 281

Query: 341 ISRLITYDGVKQRLWGLQLSDSVEP--GSPITIDGKKVGKLT--SYTPGRKGLEHFGLGY 400
           ++R I   G  ++L G+++ D   P  G P+ + G+ VG++T  S++P  +  ++  L Y
Sbjct: 282 LAR-IKEQGPTRKLVGIEMIDRGVPRQGYPVAVGGEVVGEVTTGSFSPTLE--KNIALAY 341

Query: 401 IKKRAASCG---DTVIVGENTIGRVVEVPF 413
           +    ++ G   + +I G     RVVE PF
Sbjct: 342 VPVAHSAVGTEVEVIIRGRALKARVVETPF 368

[Close]

BLAST of CmoCh11G015180 vs. ExPASy Swiss-Prot
Match: Q9K934 (Aminomethyltransferase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=gcvT PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.8e-19
Identity = 86/338 (25.44%), Postives = 153/338 (45.27%), Query Frame = 0


Query: 92  FHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVT 151
           F +  E  +A      + D+SH G + V+G     +LQ   T +   +  GQ   T    
Sbjct: 32  FSSIKEEHEAVRTKAGLFDVSHMGEVEVTGAQALNYLQRLVTNDVSKIKDGQAQYTAMCY 91

Query: 152 PTARTIDIAQAW-IMKNAITLIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLV 211
               T+D    +   ++   L+++    +  I  + K+    D V I +++ QT+ L L 
Sbjct: 92  ENGGTVDDLLIYRRSEDQYLLVINAANIDKDIAWMEKHAI--DGVSITNVSNQTAQLALQ 151

Query: 212 GPKSNQIMEALNLGSIAGEPYGTHQHFS-VNGMPITVGVGNIIS------EEGFSLLISP 271
           GP +  +++ L       EP    + F  V+G+ I  GV  ++S      E+GF L    
Sbjct: 152 GPVAENVLQTL-----TEEPLADIKFFRFVDGVNI-AGVNVLLSRTGYTGEDGFELYCLA 211

Query: 272 AVSGSVWKTLVSL----GAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGLWNSISL 331
             +  +WK L+      G VP G  A + LR    +P   +ELT + + +EAG+  ++ +
Sbjct: 212 EDAPVLWKKLIEAGKEHGVVPCGLGARDTLRFEAKLPLYGQELTKDISPIEAGIGFAVKV 271

Query: 332 NKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEP--GSPITIDGKKVGKLTSYTPGRKG 391
           +K  + G+E + +     G  ++L GL++ D   P  G  + +D +K+G +T+ T     
Sbjct: 272 DKEDFIGKEILKKQ-KEQGAPRKLVGLEMVDKGIPRTGYEVYVDNQKIGFVTTGTQSPTL 331

Query: 392 LEHFGLGYIKKRAASCGDTVIV---GENTIGRVVEVPF 413
            ++ GL  ++   +  G  VIV       I +VV  PF
Sbjct: 332 KKNVGLALLQAEHSELGTEVIVHVRKRQLIAKVVATPF 360

[Close]

BLAST of CmoCh11G015180 vs. ExPASy Swiss-Prot
Match: P54261 (Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=gcvT PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.1e-19
Identity = 83/311 (26.69%), Postives = 145/311 (46.62%), Query Frame = 0


Query: 101 AANNGVAVVDLSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIA 160
           A    V + D+SH G+  ++G+     LQ+   ++ + L  G+   TV +      ID  
Sbjct: 44  AVREKVGMFDISHMGKFVLTGQKVLAALQSLVPSDLDRLTPGKAQYTVLLNAQGGIIDDI 103

Query: 161 QAWIM------KNAITLIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKS 220
             +        +  +TLIV+  T     Q L ++  L ++++ QD++++  L+ L GP++
Sbjct: 104 IVYDQGKNPEGQERVTLIVNAATTVKDKQWLLEH--LPEEIDFQDLSREKVLIALQGPEA 163

Query: 221 NQIMEAL---NLGSIAGEPYGTHQHFSVNGMPITVGVGNIISEEGFSLLISPAVSGSVWK 280
             I++ L   NLG +   P   H           +       E+GF +++SP V   +W+
Sbjct: 164 LTILQPLVDQNLGEL---PAFGHLEAEFLREKAFIARTGYTGEDGFEIMVSPEVGKQLWQ 223

Query: 281 TLVSLGAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGLWNSISL-NKGCYKGQETI 340
           T  S G  P G  A + LR+  GM    +++ DE   LEAGL   + L +KG + G+  +
Sbjct: 224 TFGSKGVTPCGLGARDTLRLEAGMGLYGQDMNDETTPLEAGLGWLVHLDSKGDFIGRAVL 283

Query: 341 SRLITYDGVKQRLWGLQL--SDSVEPGSPITIDGKKVGKLTSYTPGRKGLEHFGLGYIKK 400
           +     +GV++RL GL++          PI  +G+ +G +TS T      +   LGY+  
Sbjct: 284 TEQ-KANGVEKRLVGLEMLAKQIARHDYPILHNGEIMGIVTSGTLSPTLQKAIALGYVPT 343

[Close]

BLAST of CmoCh11G015180 vs. ExPASy TrEMBL
Match: A0A6J1EI20 (putative transferase At1g60990, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434553 PE=3 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 6.6e-246
Identity = 432/432 (100.00%), Postives = 432/432 (100.00%), Query Frame = 0


Query: 1   MASYWSYGFSVSDAAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALP 60
           MASYWSYGFSVSDAAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALP
Sbjct: 1   MASYWSYGFSVSDAAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALP 60

Query: 61  FDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVS 120
           FDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVS
Sbjct: 61  FDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVS 120

Query: 121 GEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 180
           GEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES
Sbjct: 121 GEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 180

Query: 181 IIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVN 240
           IIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVN
Sbjct: 181 IIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVN 240

Query: 241 GMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQK 300
           GMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQK
Sbjct: 241 GMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQK 300

Query: 301 ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI 360
           ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI
Sbjct: 301 ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI 360

Query: 361 DGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQPPLS 420
           DGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQPPLS
Sbjct: 361 DGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQPPLS 420

Query: 421 NSSSNLPRRSVQ 433
           NSSSNLPRRSVQ
Sbjct: 421 NSSSNLPRRSVQ 432

[Close]

BLAST of CmoCh11G015180 vs. ExPASy TrEMBL
Match: A0A6J1JI89 (putative transferase At1g60990, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486027 PE=3 SV=1)

HSP 1 Score: 836.3 bits (2159), Expect = 6.0e-239
Identity = 423/432 (97.92%), Postives = 424/432 (98.15%), Query Frame = 0


Query: 1   MASYWSYGFSVSDAAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALP 60
           MASYWSYGFSVSDAAIPSTSRAFISN +PCRLRLPAFRPRNIRKPHTKANRIRTSFSALP
Sbjct: 1   MASYWSYGFSVSDAAIPSTSRAFISNLQPCRLRLPAFRPRNIRKPHTKANRIRTSFSALP 60

Query: 61  FDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVS 120
           FDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVS
Sbjct: 61  FDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVS 120

Query: 121 GEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 180
           GEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES
Sbjct: 121 GEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 180

Query: 181 IIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVN 240
           I QMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVN
Sbjct: 181 ISQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVN 240

Query: 241 GMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQK 300
           GMPITVGVGNIISEEGFSLLISP VSG VWKTLVSLGAVPMGS AWEKLRIFQGMPAPQK
Sbjct: 241 GMPITVGVGNIISEEGFSLLISPVVSGPVWKTLVSLGAVPMGSGAWEKLRIFQGMPAPQK 300

Query: 301 ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI 360
           ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI
Sbjct: 301 ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI 360

Query: 361 DGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQPPLS 420
           DGKKVGKLTSYTPGRKGLEHFGLGYIKKRAAS GDTVIVGENTIGRVVEVPFLA QPPLS
Sbjct: 361 DGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASSGDTVIVGENTIGRVVEVPFLARQPPLS 420

Query: 421 NSSSNLPRRSVQ 433
           NSSSNLPR SVQ
Sbjct: 421 NSSSNLPRSSVQ 432

[Close]

BLAST of CmoCh11G015180 vs. ExPASy TrEMBL
Match: A0A6J1DYD6 (LOW QUALITY PROTEIN: putative transferase At1g60990, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025359 PE=3 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.9e-213
Identity = 385/443 (86.91%), Postives = 403/443 (90.97%), Query Frame = 0


Query: 1   MASYWSYGFSVSDAAIPSTSRAFISNP-----------RPCRLRLPAFRPRNIRKPHTKA 60
           MASYWSYG S+SD+ IPSTSRAFIS+P           +P RL+  AFR RNI+K  +KA
Sbjct: 1   MASYWSYGQSLSDSTIPSTSRAFISSPWHWGLSASSFSQPHRLQFTAFRARNIKKIDSKA 60

Query: 61  NRIRTSFSALPFDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVV 120
           NR+ T FSALPFDLSPPPID+DLLE A  EGARISDDGIIETFHNDDEALDAANNGVAVV
Sbjct: 61  NRLTTFFSALPFDLSPPPIDQDLLETAEIEGARISDDGIIETFHNDDEALDAANNGVAVV 120

Query: 121 DLSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAI 180
           DLSHFGR+RVSGEDRYQFL NQSTANFESL QGQGCST FVTPTARTIDIAQAWIMKNAI
Sbjct: 121 DLSHFGRLRVSGEDRYQFLHNQSTANFESLRQGQGCSTAFVTPTARTIDIAQAWIMKNAI 180

Query: 181 TLIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGE 240
           TLIVSPVTRESII+MLNKYIFLADKVEIQDITK TSLLVLVGPKSNQIMEALNLG IAGE
Sbjct: 181 TLIVSPVTRESIIRMLNKYIFLADKVEIQDITKHTSLLVLVGPKSNQIMEALNLGDIAGE 240

Query: 241 PYGTHQHFSVNGMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKL 300
           PYGTHQHFSVNGMPITVGVGN+ISEEGFSLL+SPAV+G VWKTLVSLGAVPMGS+AWEKL
Sbjct: 241 PYGTHQHFSVNGMPITVGVGNVISEEGFSLLVSPAVAGPVWKTLVSLGAVPMGSEAWEKL 300

Query: 301 RIFQGMPAPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLS 360
           RIFQGMP PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLS
Sbjct: 301 RIFQGMPTPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLS 360

Query: 361 DSVEPGSPITIDGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVE 420
           DSVEPGS ITIDGK+VGKLTSYTPGRKGLEHFGLGYIKKRAAS GDTVIVGENTIG VVE
Sbjct: 361 DSVEPGSSITIDGKRVGKLTSYTPGRKGLEHFGLGYIKKRAASNGDTVIVGENTIGXVVE 420

Query: 421 VPFLAGQPPLSNSSSNLPRRSVQ 433
           VPFLA Q PLSNSSS   + SV+
Sbjct: 421 VPFLARQQPLSNSSSITSQGSVE 443

[Close]

BLAST of CmoCh11G015180 vs. ExPASy TrEMBL
Match: A0A0A0KJI9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G417880 PE=3 SV=1)

HSP 1 Score: 741.9 bits (1914), Expect = 1.5e-210
Identity = 383/443 (86.46%), Postives = 399/443 (90.07%), Query Frame = 0


Query: 2   ASYWSYGFSVSDAAIPSTSRAFISN-----------PRPCRLRLPAFRPRNIRKPHTKAN 61
           +SY  YGF VSD+ IPSTSRAFISN             P RL LP FRP +I+KPH KA+
Sbjct: 3   SSYCGYGFFVSDSTIPSTSRAFISNSWHSNLSISSFSHPHRLHLPPFRPPHIKKPHIKAS 62

Query: 62  RIRTSFSALPFDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVD 121
           R RTSFSALPFDLSPPPIDEDLLEAA  EGARISDDGIIETFHND+EALDAANNGVAVVD
Sbjct: 63  RTRTSFSALPFDLSPPPIDEDLLEAAAVEGARISDDGIIETFHNDEEALDAANNGVAVVD 122

Query: 122 LSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAIT 181
           LSHFGR+RVSG+DR QFL NQSTANFESL QGQGCSTVFVTPTARTIDIAQAWIMKNAIT
Sbjct: 123 LSHFGRLRVSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAIT 182

Query: 182 LIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEP 241
           LIVSPVTRESII+MLNKYIF+ADKVEIQDIT QTSLLVLVGPKSNQIME LNLGSIAGEP
Sbjct: 183 LIVSPVTRESIIRMLNKYIFVADKVEIQDITNQTSLLVLVGPKSNQIMEDLNLGSIAGEP 242

Query: 242 YGTHQHFSVNGMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLR 301
           YGTHQHFSVNGMPITVGVGN+ISEEGFSLLISPAV+G VWK LVSLGAVPMGS AWEKLR
Sbjct: 243 YGTHQHFSVNGMPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLR 302

Query: 302 IFQGMPAPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSD 361
           I QGMPAPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSD
Sbjct: 303 ISQGMPAPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSD 362

Query: 362 SVEPGSPITIDGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEV 421
           SVEPGSPITIDGK+VGKLTSY PGRK  EHFGLGYIKK+AAS GD+VIVGENTIG+VVEV
Sbjct: 363 SVEPGSPITIDGKRVGKLTSYAPGRKESEHFGLGYIKKKAASVGDSVIVGENTIGKVVEV 422

Query: 422 PFLAGQPPLSN-SSSNLPRRSVQ 433
           PFLA Q PLSN SSSN P  SVQ
Sbjct: 423 PFLARQQPLSNSSSSNTPESSVQ 445

[Close]

BLAST of CmoCh11G015180 vs. ExPASy TrEMBL
Match: A0A5D3CQT8 (Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00010 PE=3 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 3.8e-209
Identity = 380/443 (85.78%), Postives = 398/443 (89.84%), Query Frame = 0


Query: 2   ASYWSYGFSVSDAAIPSTSRAFISN-----------PRPCRLRLPAFRPRNIRKPHTKAN 61
           ASY  YGF VSD+ +PSTSRAFISN             P RL+LP FRP NI+KPH+ AN
Sbjct: 3   ASYCGYGFFVSDSTVPSTSRAFISNSCHWDLSISSFSHPHRLQLPPFRPPNIKKPHSNAN 62

Query: 62  RIRTSFSALPFDLSPPPIDEDLLEAATTEGARISDDGIIETFHNDDEALDAANNGVAVVD 121
           R  TSFSALPFDLSPPPIDEDLLEAA  EGARISDDGIIETFHND++ALDAANNGVAVVD
Sbjct: 63  RKSTSFSALPFDLSPPPIDEDLLEAAAVEGARISDDGIIETFHNDEQALDAANNGVAVVD 122

Query: 122 LSHFGRIRVSGEDRYQFLQNQSTANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAIT 181
           LSHFGR+RVSG+DR QFL NQSTANFESL QGQGCSTVFVTPTARTIDIAQAWIMKNAIT
Sbjct: 123 LSHFGRLRVSGDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAIT 182

Query: 182 LIVSPVTRESIIQMLNKYIFLADKVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEP 241
           LIVSPVTRESII+MLNKYIFLADKVEIQDIT QTSLLVLVGPKSNQIME LNLGSIAGEP
Sbjct: 183 LIVSPVTRESIIRMLNKYIFLADKVEIQDITNQTSLLVLVGPKSNQIMEDLNLGSIAGEP 242

Query: 242 YGTHQHFSVNGMPITVGVGNIISEEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLR 301
           YGTHQHFSVNGMPITVGVG++ISEEGFSLLISPAV+G VWK LVSLGAVPMGS AWEKLR
Sbjct: 243 YGTHQHFSVNGMPITVGVGSVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLR 302

Query: 302 IFQGMPAPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSD 361
           IFQGMP+PQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSD
Sbjct: 303 IFQGMPSPQKELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSD 362

Query: 362 SVEPGSPITIDGKKVGKLTSYTPGRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEV 421
           SVEPGSPITIDGK+VGKLTSY PGRK  EHFGLGYIKK+AAS GDTVIVGE+T G VVEV
Sbjct: 363 SVEPGSPITIDGKRVGKLTSYAPGRKESEHFGLGYIKKKAASIGDTVIVGEDTTGTVVEV 422

Query: 422 PFLAGQPPLSNSS-SNLPRRSVQ 433
           PFLA Q PLSNSS S+ P  SVQ
Sbjct: 423 PFLARQQPLSNSSPSSTPESSVQ 445

[Close]

BLAST of CmoCh11G015180 vs. TAIR 10
Match: AT1G60990.1 (Glycine cleavage T-protein family )

HSP 1 Score: 540.4 bits (1391), Expect = 1.3e-153
Identity = 274/412 (66.50%), Postives = 321/412 (77.91%), Query Frame = 0


Query: 14  AAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALPFDLSPPPIDEDLL 73
           A +P      +   R   LR   FR R       +   +  S  +L FD SPPPID D L
Sbjct: 26  ALLPCLYNGTVLRRRSLSLRKCGFRERKF-----QLRCVSASSDSLQFDFSPPPIDHDFL 85

Query: 74  EAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQST 133
           +  +  G ++S+DG++E+F NDDEALDA +NGV VVDLSHFGRIRVSG+DR  FL NQ+T
Sbjct: 86  DTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHFLHNQTT 145

Query: 134 ANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRESIIQMLNKYIFLAD 193
           ANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T +SII+MLNKYIF AD
Sbjct: 146 ANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNKYIFFAD 205

Query: 194 KVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVNGMPITVGVGNIIS 253
           KVEI+DITKQT L  L GPKSNQIM  LNLG + G+PYG HQH+S +GMPITVGVG++IS
Sbjct: 206 KVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLIS 265

Query: 254 EEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGL 313
           +EGF++L+SP  + SVWKTL++ GA+PMGS AWEKLRI QG PAP++EL+ EFNVLEAGL
Sbjct: 266 DEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERELSKEFNVLEAGL 325

Query: 314 WNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITIDGKKVGKLTSYTP 373
           WNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+DGKKVGKLTSYT 
Sbjct: 326 WNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVDGKKVGKLTSYTG 385

Query: 374 GRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQ-PPLSNSSS 425
           G+ G  HFGLGYIKK+AAS G+TV VGE+  G V EVP+LA Q PP +NSSS
Sbjct: 386 GKNGSGHFGLGYIKKQAASIGNTVTVGEDISGIVSEVPYLARQHPPSANSSS 432

[Close]

BLAST of CmoCh11G015180 vs. TAIR 10
Match: AT1G60990.2 (Glycine cleavage T-protein family )

HSP 1 Score: 540.4 bits (1391), Expect = 1.3e-153
Identity = 274/412 (66.50%), Postives = 321/412 (77.91%), Query Frame = 0


Query: 14  AAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALPFDLSPPPIDEDLL 73
           A +P      +   R   LR   FR R       +   +  S  +L FD SPPPID D L
Sbjct: 26  ALLPCLYNGTVLRRRSLSLRKCGFRERKF-----QLRCVSASSDSLQFDFSPPPIDHDFL 85

Query: 74  EAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQST 133
           +  +  G ++S+DG++E+F NDDEALDA +NGV VVDLSHFGRIRVSG+DR  FL NQ+T
Sbjct: 86  DTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHFLHNQTT 145

Query: 134 ANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRESIIQMLNKYIFLAD 193
           ANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T +SII+MLNKYIF AD
Sbjct: 146 ANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNKYIFFAD 205

Query: 194 KVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVNGMPITVGVGNIIS 253
           KVEI+DITKQT L  L GPKSNQIM  LNLG + G+PYG HQH+S +GMPITVGVG++IS
Sbjct: 206 KVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLIS 265

Query: 254 EEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGL 313
           +EGF++L+SP  + SVWKTL++ GA+PMGS AWEKLRI QG PAP++EL+ EFNVLEAGL
Sbjct: 266 DEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERELSKEFNVLEAGL 325

Query: 314 WNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITIDGKKVGKLTSYTP 373
           WNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+DGKKVGKLTSYT 
Sbjct: 326 WNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVDGKKVGKLTSYTG 385

Query: 374 GRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQ-PPLSNSSS 425
           G+ G  HFGLGYIKK+AAS G+TV VGE+  G V EVP+LA Q PP +NSSS
Sbjct: 386 GKNGSGHFGLGYIKKQAASIGNTVTVGEDISGIVSEVPYLARQHPPSANSSS 432

[Close]

BLAST of CmoCh11G015180 vs. TAIR 10
Match: AT1G60990.3 (Glycine cleavage T-protein family )

HSP 1 Score: 540.4 bits (1391), Expect = 1.3e-153
Identity = 274/412 (66.50%), Postives = 321/412 (77.91%), Query Frame = 0


Query: 14  AAIPSTSRAFISNPRPCRLRLPAFRPRNIRKPHTKANRIRTSFSALPFDLSPPPIDEDLL 73
           A +P      +   R   LR   FR R       +   +  S  +L FD SPPPID D L
Sbjct: 26  ALLPCLYNGTVLRRRSLSLRKCGFRERKF-----QLRCVSASSDSLQFDFSPPPIDHDFL 85

Query: 74  EAATTEGARISDDGIIETFHNDDEALDAANNGVAVVDLSHFGRIRVSGEDRYQFLQNQST 133
           +  +  G ++S+DG++E+F NDDEALDA +NGV VVDLSHFGRIRVSG+DR  FL NQ+T
Sbjct: 86  DTISVSGGKVSEDGVVESFDNDDEALDAFDNGVVVVDLSHFGRIRVSGDDRAHFLHNQTT 145

Query: 134 ANFESLCQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRESIIQMLNKYIFLAD 193
           ANFESL +GQGC TVFVTPTARTIDIA AWIMKNAI L VSP T +SII+MLNKYIF AD
Sbjct: 146 ANFESLYEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQSIIEMLNKYIFFAD 205

Query: 194 KVEIQDITKQTSLLVLVGPKSNQIMEALNLGSIAGEPYGTHQHFSVNGMPITVGVGNIIS 253
           KVEI+DITKQT L  L GPKSNQIM  LNLG + G+PYG HQH+S +GMPITVGVG++IS
Sbjct: 206 KVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGRHQHYSFDGMPITVGVGSLIS 265

Query: 254 EEGFSLLISPAVSGSVWKTLVSLGAVPMGSDAWEKLRIFQGMPAPQKELTDEFNVLEAGL 313
           +EGF++L+SP  + SVWKTL++ GA+PMGS AWEKLRI QG PAP++EL+ EFNVLEAGL
Sbjct: 266 DEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPERELSKEFNVLEAGL 325

Query: 314 WNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITIDGKKVGKLTSYTP 373
           WNSISLNKGCYKGQETI+RL+TYDG+KQRL GL LS   EPGS IT+DGKKVGKLTSYT 
Sbjct: 326 WNSISLNKGCYKGQETIARLMTYDGIKQRLCGLNLSAPSEPGSTITVDGKKVGKLTSYTG 385

Query: 374 GRKGLEHFGLGYIKKRAASCGDTVIVGENTIGRVVEVPFLAGQ-PPLSNSSS 425
           G+ G  HFGLGYIKK+AAS G+TV VGE+  G V EVP+LA Q PP +NSSS
Sbjct: 386 GKNGSGHFGLGYIKKQAASIGNTVTVGEDISGIVSEVPYLARQHPPSANSSS 432

The following BLAST results are available for this feature:

BLAST of CmoCh11G015180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681Y3	1.8e-152	66.50	Putative transferase At1g60990, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q65HF9	3.7e-20	24.26	Aminomethyltransferase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / J...	[more]
Q67N36	8.2e-20	25.45	Aminomethyltransferase OS=Symbiobacterium thermophilum (strain T / IAM 14863) OX...	[more]
Q9K934	1.8e-19	25.44	Aminomethyltransferase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 /...	[more]
P54261	3.1e-19	26.69	Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111170...	[more]

BLAST of CmoCh11G015180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EI20	6.6e-246	100.00	putative transferase At1g60990, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1JI89	6.0e-239	97.92	putative transferase At1g60990, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1DYD6	1.9e-213	86.91	LOW QUALITY PROTEIN: putative transferase At1g60990, chloroplastic OS=Momordica ...	[more]
A0A0A0KJI9	1.5e-210	86.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G417880 PE=3 SV=1	[more]
A0A5D3CQT8	3.8e-209	85.78	Putative transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496...	[more]

BLAST of CmoCh11G015180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60990.1	1.3e-153	66.50	Glycine cleavage T-protein family	[more]
AT1G60990.2	1.3e-153	66.50	Glycine cleavage T-protein family	[more]
AT1G60990.3	1.3e-153	66.50	Glycine cleavage T-protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027266	GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1	GENE3D	3.30.1360.120	Probable tRNA modification gtpase trme; domain 1	coord: 83..413 e-value: 5.7E-72 score: 244.8
IPR006222	Aminomethyltransferase, folate-binding domain	PFAM	PF01571	GCV_T	coord: 97..313 e-value: 7.8E-33 score: 113.9
IPR013977	Glycine cleavage T-protein, C-terminal barrel domain	PFAM	PF08669	GCV_T_C	coord: 342..400 e-value: 7.4E-7 score: 29.0
IPR017703	YgfZ/GcvT conserved site	TIGRFAM	TIGR03317	TIGR03317	coord: 285..347 e-value: 1.4E-18 score: 64.6
None	No IPR available	PANTHER	PTHR13847	SARCOSINE DEHYDROGENASE-RELATED	coord: 45..424
None	No IPR available	PANTHER	PTHR13847:SF262	MALATE:QUINONE OXIDOREDUCTASE	coord: 45..424
None	No IPR available	SUPERFAMILY	103025	Folate-binding domain	coord: 95..334
IPR029043	Glycine cleavage T-protein/YgfZ, C-terminal	SUPERFAMILY	101790	Aminomethyltransferase beta-barrel domain	coord: 342..413

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015180.1	CmoCh11G015180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity