CmoCh11G015030 (gene) Cucurbita moschata (Rifu) v1

BLAST of CmoCh11G015030 vs. ExPASy Swiss-Prot
Match: F4I171 (Mediator of RNA polymerase II transcription subunit 15a OS=Arabidopsis thaliana OX=3702 GN=MED15A PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-27
Identity = 60/105 (57.14%), Postives = 85/105 (80.95%), Query Frame = 0

Query: 1   MDSNHLGPA-QGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKI 60
           MD+N+  P+   GE  +D GDWR+QL P+SR +IV+KI+ETLK+HLP SGPEG++E+R+I
Sbjct: 1   MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60

Query: 61  AVRFEEKVYTVATSQSDYLRKISLRMLTMETK----PGTTPALPS 101
           A RFEEK+++ A +Q+DYLRKIS++MLTMETK     G++ A+P+
Sbjct: 61  AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105

BLAST of CmoCh11G015030 vs. ExPASy TrEMBL
Match: A0A6J1EIJ8 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita moschata OX=3662 GN=LOC111434576 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.5e-53
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0

Query: 1   MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA 60
           MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA
Sbjct: 1   MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA 60

Query: 61  VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP 111
           VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP
Sbjct: 61  VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP 110

BLAST of CmoCh11G015030 vs. ExPASy TrEMBL
Match: A0A6J1JL81 (mediator of RNA polymerase II transcription subunit 15a-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111486210 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.0e-49
Identity = 104/110 (94.55%), Postives = 106/110 (96.36%), Query Frame = 0

Query: 1   MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA 60
           MDSNHLGP QGGESGVDAGDWRSQLQPESRHRIV+KIIETLKRHLPVS PEG SEVRKIA
Sbjct: 1   MDSNHLGPTQGGESGVDAGDWRSQLQPESRHRIVNKIIETLKRHLPVSSPEGSSEVRKIA 60

Query: 61  VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP 111
           VRFEEKVYTVATSQSDYLRKISLRML+METK GTTPALPSMSGPMASNQP
Sbjct: 61  VRFEEKVYTVATSQSDYLRKISLRMLSMETKSGTTPALPSMSGPMASNQP 110

BLAST of CmoCh11G015030 vs. ExPASy TrEMBL
Match: A0A6J1JP13 (mediator of RNA polymerase II transcription subunit 15a-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486210 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.2e-48
Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 0

Query: 1   MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA 60
           MDSNHLGP QGGESGVDAGDWRSQLQPESRHRIV+KIIETLKRH+PVSGPEGLSE+RKIA
Sbjct: 1   MDSNHLGPTQGGESGVDAGDWRSQLQPESRHRIVNKIIETLKRHIPVSGPEGLSELRKIA 60

Query: 61  VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP 111
           VRFEEKVY  ATSQSDYLRKISLRMLTMETK GTT ALPSMSGP++SNQP
Sbjct: 61  VRFEEKVYNAATSQSDYLRKISLRMLTMETKSGTTTALPSMSGPVSSNQP 110

BLAST of CmoCh11G015030 vs. ExPASy TrEMBL
Match: A0A6J1JL76 (mediator of RNA polymerase II transcription subunit 15a-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486210 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0

Query: 1   MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA 60
           MDSNHLGPAQGGE  VDAGDWRSQL P+SRHRIV+ IIETLKRH+PVSGPEGLSE+RKIA
Sbjct: 1   MDSNHLGPAQGGEPEVDAGDWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLSELRKIA 60

Query: 61  VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP 111
           VRFEEKVY  ATSQSDYLRKISLRMLTMETK GTT ALPSMSGP++SNQP
Sbjct: 61  VRFEEKVYNAATSQSDYLRKISLRMLTMETKSGTTTALPSMSGPVSSNQP 110

BLAST of CmoCh11G015030 vs. ExPASy TrEMBL
Match: A0A6J1EI55 (mediator of RNA polymerase II transcription subunit 15a-like OS=Cucurbita moschata OX=3662 GN=LOC111434574 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 93/110 (84.55%), Postives = 101/110 (91.82%), Query Frame = 0

Query: 1   MDSNHLGPAQGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIA 60
           MDSNHLGPAQGGE  VDAG WRSQL P+SRHRIV+ IIETLKRH+PVSGPEGL+E+RKIA
Sbjct: 1   MDSNHLGPAQGGEPEVDAGVWRSQLPPDSRHRIVNSIIETLKRHIPVSGPEGLNELRKIA 60

Query: 61  VRFEEKVYTVATSQSDYLRKISLRMLTMETKPGTTPALPSMSGPMASNQP 111
           VRFEEKVY  ATSQSDYLRKISLRMLTMETK GTT ALPS+SGP++SNQP
Sbjct: 61  VRFEEKVYNAATSQSDYLRKISLRMLTMETKSGTTTALPSVSGPVSSNQP 110

BLAST of CmoCh11G015030 vs. TAIR 10
Match: AT1G15780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 2.1e-28
Identity = 60/105 (57.14%), Postives = 85/105 (80.95%), Query Frame = 0

Query: 1   MDSNHLGPA-QGGESGVDAGDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKI 60
           MD+N+  P+   GE  +D GDWR+QL P+SR +IV+KI+ETLK+HLP SGPEG++E+R+I
Sbjct: 1   MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI 60

Query: 61  AVRFEEKVYTVATSQSDYLRKISLRMLTMETK----PGTTPALPS 101
           A RFEEK+++ A +Q+DYLRKIS++MLTMETK     G++ A+P+
Sbjct: 61  AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPA 105

BLAST of CmoCh11G015030 vs. TAIR 10
Match: AT1G15790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits to 94 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 19  GDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVYTVATSQSDYL 78
           GDWR+Q    SR RIV+KI+ET  + LP   PEG +E+RKIAVRFEEK++  A++Q++YL
Sbjct: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64

Query: 79  RKISLRMLTMETK-----------PGTTPALPSMSGPMASNQP 111
           R+I ++ML METK             T P +P  S P  +N+P
Sbjct: 65  RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP--NNEP 105

BLAST of CmoCh11G015030 vs. TAIR 10
Match: AT1G15790.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 0

Query: 19  GDWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVYTVATSQSDYL 78
           GDWR+Q    SR RIV+KI+ET  + LP   PEG +E+RKIAVRFEEK++  A++Q++YL
Sbjct: 5   GDWRTQFPSASRSRIVNKIMETQLKQLPFIRPEGTNELRKIAVRFEEKLFNNASNQTEYL 64

Query: 79  RKISLRMLTMETK-----------PGTTPALPSMSGPMASNQP 111
           R+I ++ML METK             T P +P  S P  +N+P
Sbjct: 65  RQICMKMLNMETKSQNAAGSSSADDNTPPLVPEPSVP--NNEP 105

BLAST of CmoCh11G015030 vs. TAIR 10
Match: AT2G10440.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 1628 Blast hits to 1350 proteins in 149 species: Archae - 0; Bacteria - 39; Metazoa - 480; Fungi - 159; Plants - 187; Viruses - 2; Other Eukaryotes - 761 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 7.9e-07
Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 0

Query: 20 DWRSQLQPESRHRIVDKIIETLKRHLPVS------GPEGLSEVRKIAVRFEEKVYTVATS 79
          DWRSQ +PE R +++ KI+ +L  +  V             ++  IA +FEE  Y++AT 
Sbjct: 24 DWRSQHEPELRQKVLSKIVCSLNDYRKVEKFKEKFHAHEEYKINDIASKFEENFYSIATD 83

Query: 80 QSDYLRKIS 83
          ++DYLRK+S
Sbjct: 84 KNDYLRKLS 92

BLAST of CmoCh11G015030 vs. TAIR 10
Match: AT2G10440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15780.1); Has 8319 Blast hits to 5104 proteins in 317 species: Archae - 0; Bacteria - 285; Metazoa - 1706; Fungi - 535; Plants - 320; Viruses - 18; Other Eukaryotes - 5455 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.7e-04
Identity = 20/56 (35.71%), Postives = 32/56 (57.14%), Query Frame = 0

Query: 20 DWRSQLQPESRHRIVDKIIETLKRHLPVSGPEGLSEVRKIAVRFEEKVYTVATSQS 76
          DWRSQ +PE R +++ KI+E  K            ++  IA +FEE  Y++AT ++
Sbjct: 24 DWRSQHEPELRQKVLSKIVEKFKEKFHAHEE---YKINDIASKFEENFYSIATDKT 76