CmoCh11G015010 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G015010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	NAC domain-containing protein
Location	Cmo_Chr11: 10656490 .. 10657988 (-)
RNA-Seq Expression	CmoCh11G015010
Synteny	CmoCh11G015010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCTGCTCATACCCACAACTTCACCCTCCCTCCCGGGTTCCGATTCTATCCCACCGATGAAGAGCTCGTCGTCCATTTCCTCCATCGCAAGGCCGCCTTGCTACCGTGCCACCCCGACGTCATTCCCGATCTCGCTCTCTTCCCCTACGATCCATGGGAACTAGATGGTATGTTTAACTATATAAGACTTTTTTTTACCTCTTTTGTTGATTTTTTTTTTTTAATTTTTAAAATTTAAAAGATATATTTAACTTTTCGACTTAAAAAAATTAAAAAATATCAAACTTTGAAAAAAAAAAAAGTTTAATAAACGATTTTATGGACCAAAATAGTTTTCGTAAATGCTCTCGAACTGTTTTAAAAATATCGTTTAATTTTAAAAATTTTAAAAAATATGAAATAAAAGGATGAAGACTATGAAATAAAATAAAAGAGGTACTATATATTTTTTTTAATTTAGAAATATATATTTTTAGTAATTTTTAATATATTGATATTATTTATATATTAAGATAGGAGATATTAAGTTTCCATTAATTTAAGCTATAAATATATTTTTTTATATTACACGTGGAAGTTGATGATTGGTTGTGTGTTTAGGGAAGGCGTTGGGAGAGGGAAACCAGTGGTATTTCTACAGTAGAAAAACCGACGCTCGAGTTACCGCTAATGGCTACTGGAATCCATTGGGCCGAGACGAGCCCGTCGTCGCTTCCGCCACCGCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTCCACGTCGGCGACGCCAAAACCAACTGGGTAATGCACGAGTATCGTCTTTACAACGCCGCCGCCGCCGCCGGTAGATCGTCCAGACGCCGAGGACGTCCAAAACGAGTACGCCACCGTCCACTGAAACCACTTTTCAAAAACCACTTTTTAAAAAACCGCTTAAAATAAAATCTATTTATAAAATCAAATAAATAAAATTATATAGTAAATATCCGTATATTTGTTTTTAATAAAAAAAAAAGAAAATATGATATATATGGTAAATTATAATTTATGAATAAATACAGATTGAATGGTTTTTTCAGGATTACAGCAAATGGGTATTGTGCAGAGTTTACGAGGAAGAAGAAGAAGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGCTGGATGATCTTGACGAAATAAGCTTACCGGATCGCCTCCATTGAAGATAAGGATAGGATTCAGCTATTACCGAACAATCCCTTACCACGTGGCACTAAATTACCAACCCAACCGACCTCCTTTTTATATTTTCCACTTTTTTTTTTTTAAATTATTCTTTTTCTTTTCTTTATGTTTATTTTTATTAATTAGTTCTACAAAAGTAAAATAAAAAAAAGCTTTTTTTTTTTCTTCCATTCATGTAAACAGCCTCTCTGGGAGGCTCGACTTCTCTCTTTGGAGGGCCCAATAAAGTACGCTCTTTGTTCGACTACACCTTCGAGACTCGCAATTCTTTATTCGA

mRNA sequence

ATGGATGCTGCTCATACCCACAACTTCACCCTCCCTCCCGGGTTCCGATTCTATCCCACCGATGAAGAGCTCGTCGTCCATTTCCTCCATCGCAAGGCCGCCTTGCTACCGTGCCACCCCGACGTCATTCCCGATCTCGCTCTCTTCCCCTACGATCCATGGGAACTAGATGGGAAGGCGTTGGGAGAGGGAAACCAGTGGTATTTCTACAGTAGAAAAACCGACGCTCGAGTTACCGCTAATGGCTACTGGAATCCATTGGGCCGAGACGAGCCCGTCGTCGCTTCCGCCACCGCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTCCACGTCGGCGACGCCAAAACCAACTGGGTAATGCACGAGTATCGTCTTTACAACGCCGCCGCCGCCGCCGGTAGATCGTCCAGACGCCGAGGACGTCCAAAACGAGATTACAGCAAATGGGTATTGTGCAGAGTTTACGAGGAAGAAGAAGAAGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGCTGGATGATCTTGACGAAATAAGCTTACCGGATCGCCTCCATTGAAGATAAGGATAGGATTCAGCTATTACCGAACAATCCCTTACCACGTGGCACTAAATTACCAACCCAACCGACCTCCTTTTTATATTTTCCACTTTTTTTTTTTTAAATTATTCTTTTTCTTTTCTTTATGTTTATTTTTATTAATTAGTTCTACAAAAGTAAAATAAAAAAAAGCTTTTTTTTTTTCTTCCATTCATGTAAACAGCCTCTCTGGGAGGCTCGACTTCTCTCTTTGGAGGGCCCAATAAAGTACGCTCTTTGTTCGACTACACCTTCGAGACTCGCAATTCTTTATTCGA

Coding sequence (CDS)

ATGGATGCTGCTCATACCCACAACTTCACCCTCCCTCCCGGGTTCCGATTCTATCCCACCGATGAAGAGCTCGTCGTCCATTTCCTCCATCGCAAGGCCGCCTTGCTACCGTGCCACCCCGACGTCATTCCCGATCTCGCTCTCTTCCCCTACGATCCATGGGAACTAGATGGGAAGGCGTTGGGAGAGGGAAACCAGTGGTATTTCTACAGTAGAAAAACCGACGCTCGAGTTACCGCTAATGGCTACTGGAATCCATTGGGCCGAGACGAGCCCGTCGTCGCTTCCGCCACCGCCGAAGTCGTCGGAATGAAGAAATATTTTCTCTTCCACGTCGGCGACGCCAAAACCAACTGGGTAATGCACGAGTATCGTCTTTACAACGCCGCCGCCGCCGCCGGTAGATCGTCCAGACGCCGAGGACGTCCAAAACGAGATTACAGCAAATGGGTATTGTGCAGAGTTTACGAGGAAGAAGAAGAAGGGGCGGAGCTGTCGTGTTTGGATGAAGTTTTTTTAACGCTGGATGATCTTGACGAAATAAGCTTACCGGATCGCCTCCATTGA

Protein sequence

MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWVMHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEGAELSCLDEVFLTLDDLDEISLPDRLH

Homology

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BLAST of CmoCh11G015010 vs. ExPASy Swiss-Prot
Match: Q8GWK6 (NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.2e-70
Identity = 122/185 (65.95%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVHFLHRKA+LLPCHPDVIPDL L+ YDPW+L GKALGEG QWYFY
Sbjct: 3   LPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYFY 62

Query: 71  SRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWVMHEYRLYNAA 130
           SRKT  RVT+NGYW  +G DEP+  S+T + VG+KKY  F++GD++TNW+M EY L +++
Sbjct: 63  SRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDSQTNWIMQEYSLPDSS 122

Query: 131 AAAGRSSRRRGRP-----KRDYSKWVLCRVY------EEEEEGAELSCLDEVFLTLDDLD 185
           +++ RSS+R  R      K DYSKWV+CRVY      EE+++G ELSCLDEVFL+LDDLD
Sbjct: 123 SSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSCLDEVFLSLDDLD 182

[Close]

BLAST of CmoCh11G015010 vs. ExPASy Swiss-Prot
Match: A0SPJ8 (NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NAM-1 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-31
Identity = 74/175 (42.29%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA  P    +I ++ L+ +DPWEL  KA    ++WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATA---EVVGMKKYFLFHVG----DA 130
           S +           R   +GYW   G D+P++ASAT    E VG+KK  +F+ G      
Sbjct: 95  SPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGL 154

Query: 131 KTNWVMHEYRLYNAAAAAGRSSR-------RRGRPKRDYSKWVLCRVYEEEEEGA 164
           KTNW+MHEYRL  A+A +  +SR        R         WVLCR+Y++  + A
Sbjct: 155 KTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAA 209

[Close]

BLAST of CmoCh11G015010 vs. ExPASy Swiss-Prot
Match: D2SMN4 (NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum OX=77009 GN=NAM-B1 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-31
Identity = 74/175 (42.29%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA  P    +I ++ L+ +DPWEL  KA    ++WYF+
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWYFF 94

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATA---EVVGMKKYFLFHVG----DA 130
           S +           R   +GYW   G D+P++ASAT    E VG+KK  +F+ G      
Sbjct: 95  SPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKPPRGL 154

Query: 131 KTNWVMHEYRLYNAAAAAGRSSR-------RRGRPKRDYSKWVLCRVYEEEEEGA 164
           KTNW+MHEYRL  A+A +  +SR        R         WVLCR+Y++  + A
Sbjct: 155 KTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAA 209

[Close]

BLAST of CmoCh11G015010 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-30
Identity = 76/189 (40.21%), Postives = 108/189 (57.14%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA +P    +I ++ L+ +DPWEL  KA     +WYF+
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWYFF 88

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVAS-ATAEVVGMKKYFLFHVG----DAKT 130
           S +           R   +GYW   G D+P++AS +T E VG+KK  +F+ G      KT
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 131 NWVMHEYRL--YNAAAAAGRSSRR---------RGRPKRDYSKWVLCRVYEEEEEGA--- 172
           NW+MHEYRL   +++AAA  ++R+         RG        WVLCR+Y++  +     
Sbjct: 149 NWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCRIYKKTNKAGAGQ 208

[Close]

BLAST of CmoCh11G015010 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.2e-30
Identity = 76/189 (40.21%), Postives = 109/189 (57.67%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L +KAA +P    +I ++ L+ +DPW+L  KA     +WYF+
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLPEKANFGEQEWYFF 88

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVAS-ATAEVVGMKKYFLFHVG----DAKT 130
           S +           R   +GYW   G D+P+++S +T E VG+KK  +F+ G      KT
Sbjct: 89  SPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSGSTREKVGVKKALVFYRGKPPKGVKT 148

Query: 131 NWVMHEYRL--YNAAAAAGRSSRRRGRPKRDYSK---------WVLCRVYEEEEEGA--- 172
           NW+MHEYRL   +++AAA  ++RR   P    SK         WVLCR+Y++  +     
Sbjct: 149 NWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWVLCRIYKKTNKAGAGQ 208

[Close]

BLAST of CmoCh11G015010 vs. ExPASy TrEMBL
Match: A0A6J1ELY5 (NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434573 PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 9.6e-109
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60
           MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120

Query: 121 MHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEGAELSCLDEVFLTLDDLDE 180
           MHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEGAELSCLDEVFLTLDDLDE
Sbjct: 121 MHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEEGAELSCLDEVFLTLDDLDE 180

Query: 181 ISLPDRLH 189
           ISLPDRLH
Sbjct: 181 ISLPDRLH 188

[Close]

BLAST of CmoCh11G015010 vs. ExPASy TrEMBL
Match: A0A6J1JEG2 (NAC domain-containing protein 104-like OS=Cucurbita maxima OX=3661 GN=LOC111486162 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.0e-102
Identity = 183/194 (94.33%), Postives = 184/194 (94.85%), Query Frame = 0


Query: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60
           MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWEL+GKA
Sbjct: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELEGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWV 120
           LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVG  KTNWV
Sbjct: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGHVKTNWV 120

Query: 121 MHEYRLYNA-----AAAAGRSSRRRGRPKRDYSKWVLCRVYEEEEE-GAELSCLDEVFLT 180
           MHEYRLYNA     AAAA RSSRRRGRPK DYSKWVLCRVYEEEEE GAELSCLDEVFLT
Sbjct: 121 MHEYRLYNAASAASAAAASRSSRRRGRPKLDYSKWVLCRVYEEEEETGAELSCLDEVFLT 180

Query: 181 LDDLDEISLPDRLH 189
           LDDLDEISLPDRLH
Sbjct: 181 LDDLDEISLPDRLH 194

[Close]

BLAST of CmoCh11G015010 vs. ExPASy TrEMBL
Match: A0A0A0K5V4 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86
Identity = 158/201 (78.61%), Postives = 175/201 (87.06%), Query Frame = 0


Query: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60
           M A H+HNF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDL LF YDPWELDGKA
Sbjct: 1   MAAPHSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLNLFTYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----- 120
           LGEGN+WYFYSRK + RVT NG+WNPLGRD+PV+++AT+EVVGMKKYFLFH+ DA     
Sbjct: 61  LGEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFHLQDADAGPL 120

Query: 121 KTNWVMHEYRLYNAAAA---AGRSSRRRGRPKRDYSKWVLCRVY------EEEEEGAELS 180
           KTNW+MHE+RL +AAAA   +  SSRRRGRPKRDYSKWVLCRVY      EEEE+GAELS
Sbjct: 121 KTNWIMHEFRLADAAAAVATSSSSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAELS 180

Query: 181 CLDEVFLTLDDLDEISLPDRL 188
           CLDEVFLTLDDLDEISLP+R+
Sbjct: 181 CLDEVFLTLDDLDEISLPNRI 201

[Close]

BLAST of CmoCh11G015010 vs. ExPASy TrEMBL
Match: A0A1S3C0L6 (NAC domain-containing protein 104 OS=Cucumis melo OX=3656 GN=LOC103495457 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 157/200 (78.50%), Postives = 175/200 (87.50%), Query Frame = 0


Query: 1   MDAAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKA 60
           M A  +HNF LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDL+LF YDPWELDGKA
Sbjct: 1   MAAPDSHNFNLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLSLFTYDPWELDGKA 60

Query: 61  LGEGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----- 120
           LGEGN+WYFYSRK + RVT NG+WNPLGRD+PV+++AT+EVVGMKKYFLFH+ DA     
Sbjct: 61  LGEGNRWYFYSRKIEGRVTDNGFWNPLGRDDPVLSTATSEVVGMKKYFLFHLQDADAGPL 120

Query: 121 KTNWVMHEYRLYNAAAA-AGRSSRRRGRPKRDYSKWVLCRVY-------EEEEEGAELSC 180
           KTNW+MHE+RL +AAAA +  SSRRRGRPKRDYSKWVLCRVY       EEEE+GAELSC
Sbjct: 121 KTNWIMHEFRLADAAAASSSSSSRRRGRPKRDYSKWVLCRVYERDEDQKEEEEDGAELSC 180

Query: 181 LDEVFLTLDDLDEISLPDRL 188
           LDEVFLTLDDLDEISLP+R+
Sbjct: 181 LDEVFLTLDDLDEISLPNRI 200

[Close]

BLAST of CmoCh11G015010 vs. ExPASy TrEMBL
Match: A0A6J1HIE6 (NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463897 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.3e-84
Identity = 154/203 (75.86%), Postives = 173/203 (85.22%), Query Frame = 0


Query: 3   AAHTHNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALG 62
           A H+HNF LPPGFRF+PTDEELVVHFLHRKAALLPCHPDVIPDL LFPYDPWEL+GKALG
Sbjct: 4   ADHSHNFNLPPGFRFHPTDEELVVHFLHRKAALLPCHPDVIPDLDLFPYDPWELEGKALG 63

Query: 63  EGNQWYFYSRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA---KTNW 122
           EGN+WYFYSRK DARVT NGYWNPLGRD+PV+++AT++VVGMKKYFLFH   A   KTNW
Sbjct: 64  EGNRWYFYSRKIDARVTDNGYWNPLGRDDPVLSTATSQVVGMKKYFLFHAAAADPIKTNW 123

Query: 123 VMHEYRLYNAAAAAG---------RSSRRRGRPKRDYSKWVLCRVY------EEEEEGAE 182
           +MHEYRL +A +++          RSSRRRGRPKRDYSKWVLCRVY      EEEE+GAE
Sbjct: 124 IMHEYRLPDAVSSSSSSSSSSSSTRSSRRRGRPKRDYSKWVLCRVYERDEEKEEEEDGAE 183

Query: 183 LSCLDEVFLTLDDLDEISLPDRL 188
           LSCLDEVFL+L+DLDEISLP R+
Sbjct: 184 LSCLDEVFLSLEDLDEISLPTRI 206

[Close]

BLAST of CmoCh11G015010 vs. TAIR 10
Match: AT5G64530.1 (xylem NAC domain 1 )

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-71
Identity = 122/185 (65.95%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVHFLHRKA+LLPCHPDVIPDL L+ YDPW+L GKALGEG QWYFY
Sbjct: 3   LPPGFRFFPTDEELVVHFLHRKASLLPCHPDVIPDLDLYHYDPWDLPGKALGEGRQWYFY 62

Query: 71  SRKTDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDAKTNWVMHEYRLYNAA 130
           SRKT  RVT+NGYW  +G DEP+  S+T + VG+KKY  F++GD++TNW+M EY L +++
Sbjct: 63  SRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDSQTNWIMQEYSLPDSS 122

Query: 131 AAAGRSSRRRGRP-----KRDYSKWVLCRVY------EEEEEGAELSCLDEVFLTLDDLD 185
           +++ RSS+R  R      K DYSKWV+CRVY      EE+++G ELSCLDEVFL+LDDLD
Sbjct: 123 SSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCSEEEDDDGTELSCLDEVFLSLDDLD 182

[Close]

BLAST of CmoCh11G015010 vs. TAIR 10
Match: AT1G52890.1 (NAC domain containing protein 19 )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 70/162 (43.21%), Postives = 94/162 (58.02%), Query Frame = 0


Query: 10  TLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYF 69
           +LPPGFRFYPTDEEL+V +L RKAA       +I ++ L+ +DPW L  KAL    +WYF
Sbjct: 13  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYF 72

Query: 70  YSRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----KT 129
           +S +           RV  +GYW   G D+  + S   + VG+KK  +F++G A    KT
Sbjct: 73  FSPRDRKYPNGSRPNRVAGSGYWKATGTDK--IISTEGQRVGIKKALVFYIGKAPKGTKT 132

Query: 130 NWVMHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEEE 160
           NW+MHEYRL          SRR G  K D   WVLCR+Y+++
Sbjct: 133 NWIMHEYRLI-------EPSRRNGSTKLD--DWVLCRIYKKQ 163

[Close]

BLAST of CmoCh11G015010 vs. TAIR 10
Match: AT1G69490.1 (NAC-like, activated by AP3/PI )

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29
Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 0


Query: 6   THNFTLPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGN 65
           T   TLPPGFRF+PTDEEL+V++L  +    PC   +IP++ ++ +DPW+L  K     N
Sbjct: 4   TSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFGEN 63

Query: 66  QWYFYSRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVG---- 125
           +WYF+S +           R   +GYW   G D+ + + ++   VG+KK  +F+ G    
Sbjct: 64  EWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN--VGVKKALVFYKGRPPK 123

Query: 126 DAKTNWVMHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEE--------EEEGAEL 174
             KT+W+MHEYRL+++  A   S++R G  + D  +WVLCR+Y++        E+EG   
Sbjct: 124 GIKTDWIMHEYRLHDSRKA---STKRNGSMRLD--EWVLCRIYKKRGASKLLNEQEG--- 180

[Close]

BLAST of CmoCh11G015010 vs. TAIR 10
Match: AT1G01720.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29
Identity = 69/161 (42.86%), Postives = 92/161 (57.14%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELV+H+L RK A       +I ++ L+ YDPWEL G AL    +WYF+
Sbjct: 7   LPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFF 66

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVGDA----KTN 130
           S +           R   +GYW   G D+P+      + VG+KK  +F+ G A    KTN
Sbjct: 67  SPRDRKYPNGSRPNRSAGSGYWKATGADKPI---GLPKPVGIKKALVFYAGKAPKGEKTN 126

Query: 131 WVMHEYRLYNAAAAAGRSSRRRGRPKRDYSKWVLCRVYEEE 160
           W+MHEYRL    A   RS R++    R    WVLCR+Y ++
Sbjct: 127 WIMHEYRL----ADVDRSVRKKKNSLR-LDDWVLCRIYNKK 159

[Close]

BLAST of CmoCh11G015010 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 126.3 bits (316), Expect = 2.5e-29
Identity = 67/162 (41.36%), Postives = 90/162 (55.56%), Query Frame = 0


Query: 11  LPPGFRFYPTDEELVVHFLHRKAALLPCHPDVIPDLALFPYDPWELDGKALGEGNQWYFY 70
           LPPGFRF+PTDEELVVH+L RKAA  P    +I ++ L+ +DPWEL  KA     +WYF+
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFF 76

Query: 71  SRK--------TDARVTANGYWNPLGRDEPVVASATAEVVGMKKYFLFHVG----DAKTN 130
           S +           R   +GYW   G D+PV+AS   + VG+KK  +F+ G      K++
Sbjct: 77  SPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPKGVKSD 136

Query: 131 WVMHEYRLYNAAAAAGRSSRRRGRPKRD--YSKWVLCRVYEE 159
           W+MHEYRL              G  K       WVLCR+Y++
Sbjct: 137 WIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKK 178

The following BLAST results are available for this feature:

BLAST of CmoCh11G015010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK6	2.2e-70	65.95	NAC domain-containing protein 104 OS=Arabidopsis thaliana OX=3702 GN=NAC104 PE=2...	[more]
A0SPJ8	1.2e-31	42.29	NAC transcription factor NAM-1 OS=Hordeum vulgare subsp. vulgare OX=112509 GN=NA...	[more]
D2SMN4	1.2e-31	42.29	NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum OX=77009 GN...	[more]
A2YMR0	1.3e-30	40.21	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]
Q8H4S4	2.2e-30	40.21	NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]

BLAST of CmoCh11G015010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ELY5	9.6e-109	100.00	NAC domain-containing protein 104-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JEG2	3.0e-102	94.33	NAC domain-containing protein 104-like OS=Cucurbita maxima OX=3661 GN=LOC1114861...	[more]
A0A0A0K5V4	1.0e-86	78.61	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G058030 PE=4 SV...	[more]
A0A1S3C0L6	3.9e-86	78.50	NAC domain-containing protein 104 OS=Cucumis melo OX=3656 GN=LOC103495457 PE=4 S...	[more]
A0A6J1HIE6	1.3e-84	75.86	NAC domain-containing protein 104-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]

BLAST of CmoCh11G015010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64530.1	1.6e-71	65.95	xylem NAC domain 1	[more]
AT1G52890.1	1.1e-29	43.21	NAC domain containing protein 19	[more]
AT1G69490.1	2.5e-29	36.70	NAC-like, activated by AP3/PI	[more]
AT1G01720.1	2.5e-29	42.86	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15510.1	2.5e-29	41.36	NAC domain containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 20..162 e-value: 2.8E-34 score: 120.1
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 6..157
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 12..126 e-value: 1.6E-29 score: 103.4
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 11..158 score: 41.111954
None	No IPR available	PANTHER	PTHR31719	NAC TRANSCRIPTION FACTOR 56	coord: 9..182
None	No IPR available	PANTHER	PTHR31719:SF134	NAC DOMAIN-CONTAINING PROTEIN 104	coord: 9..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G015010.1	CmoCh11G015010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043067	regulation of programmed cell death
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048367	shoot system development
biological_process	GO:0010089	xylem development
molecular_function	GO:0003677	DNA binding