CmoCh11G014890 (gene) Cucurbita moschata (Rifu) v1

Overview
NameCmoCh11G014890
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu) v1)
DescriptionPlant/MHJ24-14 protein
LocationCmo_Chr11: 10552005 .. 10556729 (-)
RNA-Seq ExpressionCmoCh11G014890
SyntenyCmoCh11G014890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCGCTCGTCGTGCTAACATAGTCGACATGTGGATCAGATTCAGTAAGTTTTTTGTACTTTCCATAGTTACTGTTCTTTTGATGGGGAAAGCAGGTTGCAGTAGATGATTCGTTGAGGTACGTCGACGAACGAAAAGCTCCGATTATCGTAAGTTATATACTTTTTGTTCAAATCAATAAAACTTCATTCAATCTCTTGCAAGTATTTTGTTCATTGTTTATGTATTTAATTGGATCTCCATGCCTACACCAATCTTTTGGCAATGTTGAAAATGAAAAAGGACTTGTTGGAAGAGTTTTTGTGCTTAATTTTCTTTTAATTTCTCAATAGGGTTTGCTATTCTCGGGTTAAATTAATAAAAATATCATTCAATTTTACCTTCTATCTCGAAATTATCTTTAAATTTTCAAAAATTCCAATAATACCCTTGAAATTTTAAAAAAAATCTAAAAAAAAGTTTAAAAATACTATACGATTAAGTTGAATGGAATAAAAATATCAAATTCTATCTCGAAATTATCTTTAAATTTCCAAAAATTTCAATAATACCCTTGAAATTTTTTAAAAAAATCTAAAAAAATCGTTAATGTTTTATTTAAAAAATACACTTTCAAAAGGGTTTTATTAATATTCTTAAATTAAAATACCTTTAAATTTTTTTAAAAAATTTGAAAATATTCTATCATATTTTAAAATATTTACGAGCGTTAATGTTAAATTTAAAATATTTCATGATTATTTTTAAGATATAGTTTTAATGGTAAATGTATTTTTAAATTTTTAATTTTTTTAAAAATTTAAAAGGTATTAAAATGTAAAGACTAATAGAAATAATAGAAATAGTATTTTTGAGTTTTTTTTTTAATTTTAGATAATATTTTTGAATTTTTATGATATTTTTATTAATTTAGTTTAAATTTTTAAAAACATTTTTACAAATTTGATTTGTTTTTAAACTTTGGTTGAATTTAAATATGATTTTAAAGAAGGTTTAAAGTCTTAAAATAAATATATAAAAAAAATTTAGATATTGAAATTAAATCGGACAAAATTTTCGAATCGTCATCCATTGCCGCAAAATCGAACCAGTTCATCGATCGAATCCGCCATGAGTCTGGCACTTCTCCAAGGCTATTCTTCGGCCGAGGAAGAAGCTGAAGACACCTCTGTCTTCAACAACACCTCTTCCGACGATGACGACCAAGATCTTGTCGCCGCCGCCGCCTCTACGGTTACCGTCAATCTTTCCATACGCGACAGGTCGCTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTCCCTTCCGCATTCGACGCCTTCTCCGAAGTAAGCTTCATTTGGTAATCTCTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTCTGCAAGTCTGTTCGGTTGAACGAATTTTGAAACTGTTCTTTTTACTGATTTTGTTATCTGTGGGCTACCGGAGGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTTTGCTGCGCCGAGAGATGTTGATCAGCCGCGAGGGGGCCGGAGGAATCGTAGGGAGAAGAAAGATTTGCCTACTGGTATGGGCTCAGTTACTTAGTGTTCGTTTATTGTCATGAGTTTCTTAAGACTGTTAAGAAGTAGAAGGAATGAAAAACATATTTCTGGAAAACTAGGTTTGAATCTTTGATGAACAGCAATTTCCTGATAAAGAGAGGAAGGGGAAGAATGGGTTTGTTTGAGAGAACCTTGGCCCCCGATTGTGCTACCTTGAGGGTTCTGCCGTCCTCTCATTAAAACGTTGACCAATAAAACCCTAAAAGTTGAGAGGACTAGAACATATACTTACTCAAGCTCCACCTTATATTGCTCACTTCTGAATTTCCCTTGCAGTTGGTTAAACACATGATTGGATCAACTTAGGAATCTAAAAATAACATGATTTCAATACTAAATAGCATAAGTTTCACCGGTTAATGCCGAGAAACTTTGATGTCGCCTTTTTATTTTCTTAACAGAAAACTAAGCACAACTTTCTTACAATGGTTTTCATCTCTTTTTAAGAAAATATTTGAATTCTTAGTCAAATTCCAAAAACAAAACAAATGTTTAAATGCTACTGTTTTTAGTTCAAACTTGGCTTGAATTTCTTAAAGCATTTGTAAAAAGTAGATGACAAAATAATGTTACTAAACATAATTTTAAAAAACAAAGGTCCAAAAATCAAATAGTTATTAGGTAGAACCTTAGTTACTTGATTTCTGCCAATTAATTACATTTTCTATTGCTAGCCAATGATGGCTCTAAGTCTTGGGTGTGGCCCCCTGATTCCTTGGGTTCCTTTAGCTTTAGATCTATATTAATTCCACCAAAAGAGTCCTAAACTTCAAATTGTGCTCTACAATTTTGAAGAAACTATTCCAAAAGGGTCAAAAAATTTTATCTGGGAAATCCTGATAGTGTGCATTGTTACATTAAACGAGAGTCAATAGAGAAACCCTTCTTCGACATATTTCAAAATCCCATGGTTTCTCTACAATGTATGGCTTGAATGTTTCTCAATAAGTTAAATAGTATTTCATTACTCATGTACCTTGGCCATATATCTAAATGTGCTTGGTTTTTATTCATACACGTCCATTTTGTCCACCCGTGTGTGCTATGACTTCCTAGCTTATTCACTGTTGTAATCCAAATAATTATCTAAGAATGTATTATTAAATTAAACAAGTTCAGATCATAGTGACACTGAACTTAACCTATTCCTTATAGTAGTTTGTATTTGGCATATTCCTTTGTTGATGCATGGGCTGTATATCCACTAGCGGCACGAGAGTAGAATCAATTGGCATCTTCCTTGAAGGGAATAGGTTAAGTTCAGTGTCACTATTTTCAATGCTGTTCCAATTAGTTTATTTGACTGAATAGAGGTGGAAGGAATAAATGGAGTAATCCAAAGAGAGCAACAGTTTATAAAATTGTTTGCAATTATGTGGGTCGATGTTTGGCATCAATTAAACTACTTGATTGTACCTTTTTTTTGTGCATTTTTGCTGTATTCTTTAATGTTTTCAAGGGAAGCAAGGGTAAAATGAAGATTGAACTGTGAACAGGTGCGGTATTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGTGATGTTGAGAATAATCAACCTTCAAATCCATCCATTTCAAACACAACGCAGGCAGGCAAGCGCGTGGCAACTGCAACCAATCCAAATGCTGAAGATGCTGCAGAACTGCTAAGGTACATTTATCGCATTTTCAAAATTGTATCCTGGTTGAGTGACATTATTTCATTCCTCATCAATCCGTATGTACACACATGCATAAAAAGAGAGAGAGAAAAGAAAAGAGTCCTGCTAGTGGTTTCAGGGTAGAGAGCGTTAATTTTTAAAAATTTGATATTTCGAATTAATCGTATACTTTTCTTCTCTTCTTTGAAATCCTGATGTAAATCAAAGCTGTTTTGCACTGAACTCAACTGTTTGTAGTAGTATCTATAAGTTTCTCGTGCTGATCTTGCCATTTTTGAACGGTATCATGTGATTCCTTTTCCAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCGAATGCACGAGGGATGTTTTGCCCTCTATGTGGTGATCGTCCTCCAGAACCAGAACTAGAACCAGACAGTGAGACGAAAAAGAAGGGCTCGACAGTCAAAGATAAGGAAAAGATAAAGAGAATGAGGGGACAGTCATCTCATGCTACTTGGAAGAGTGAAACCGAGATGCAGCTGAGACAACAGTTTGATTAG

mRNA sequence

ATGCTCGCTCGTCGTGCTAACATAGTCGACATGTGGATCAGATTCAGTAAGTTTTTTGTACTTTCCATAGTTACTGTTCTTTTGATGGGGAAAGCAGGCTATTCTTCGGCCGAGGAAGAAGCTGAAGACACCTCTGTCTTCAACAACACCTCTTCCGACGATGACGACCAAGATCTTGTCGCCGCCGCCGCCTCTACGGTTACCGTCAATCTTTCCATACGCGACAGGTCGCTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTCCCTTCCGCATTCGACGCCTTCTCCGAAGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTTTGCTGCGCCGAGAGATGTTGATCAGCCGCGAGGGGGCCGGAGGAATCGTAGGGAGAAGAAAGATTTGCCTACTGGTGCGGTATTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGTGATGTTGAGAATAATCAACCTTCAAATCCATCCATTTCAAACACAACGCAGGCAGGCAAGCGCGTGGCAACTGCAACCAATCCAAATGCTGAAGATGCTGCAGAACTGCTAAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCGAATGCACGAGGGATGTTTTGCCCTCTATGTGGTGATCGTCCTCCAGAACCAGAACTAGAACCAGACAGTGAGACGAAAAAGAAGGGCTCGACAGTCAAAGATAAGGAAAAGATAAAGAGAATGAGGGGACAGTCATCTCATGCTACTTGGAAGAGTGAAACCGAGATGCAGCTGAGACAACAGTTTGATTAG

Coding sequence (CDS)

ATGCTCGCTCGTCGTGCTAACATAGTCGACATGTGGATCAGATTCAGTAAGTTTTTTGTACTTTCCATAGTTACTGTTCTTTTGATGGGGAAAGCAGGCTATTCTTCGGCCGAGGAAGAAGCTGAAGACACCTCTGTCTTCAACAACACCTCTTCCGACGATGACGACCAAGATCTTGTCGCCGCCGCCGCCTCTACGGTTACCGTCAATCTTTCCATACGCGACAGGTCGCTTTTCGAACTTCCGCAGCCCTCCTCTCATCCCGGCCTCCCTTCCGCATTCGACGCCTTCTCCGAAGTTTCAGGACCGCCGGAGTTTCTGAATAATTCGGTTGAGGAGTTTGCTGCGCCGAGAGATGTTGATCAGCCGCGAGGGGGCCGGAGGAATCGTAGGGAGAAGAAAGATTTGCCTACTGGTGCGGTATTGGAGGCAAAAGCTCAATTAGTTGGGATTCATGAGCGAGTGAGGAGTGATGTTGAGAATAATCAACCTTCAAATCCATCCATTTCAAACACAACGCAGGCAGGCAAGCGCGTGGCAACTGCAACCAATCCAAATGCTGAAGATGCTGCAGAACTGCTAAGAATGTGCCTGCATTGTGGCATTCCCAAGACCTTTTCGAATGCACGAGGGATGTTTTGCCCTCTATGTGGTGATCGTCCTCCAGAACCAGAACTAGAACCAGACAGTGAGACGAAAAAGAAGGGCTCGACAGTCAAAGATAAGGAAAAGATAAAGAGAATGAGGGGACAGTCATCTCATGCTACTTGGAAGAGTGAAACCGAGATGCAGCTGAGACAACAGTTTGATTAG

Protein sequence

MLARRANIVDMWIRFSKFFVLSIVTVLLMGKAGYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPSAFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAKAQLVGIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD
Homology
[Close]
BLAST of CmoCh11G014890 vs. ExPASy TrEMBL
Match: A0A6J1EIK4 (uncharacterized protein LOC111434694 OS=Cucurbita moschata OX=3662 GN=LOC111434694 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.3e-127
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0 

Query: 33  GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS 92
           GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS
Sbjct: 8   GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS 67

Query: 93  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAKAQLVGIH 152
           AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAKAQLVGIH
Sbjct: 68  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAKAQLVGIH 127

Query: 153 ERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGM 212
           ERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGM
Sbjct: 128 ERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGM 187

Query: 213 FCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD 271
           FCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD
Sbjct: 188 FCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD 245

[Close]
BLAST of CmoCh11G014890 vs. ExPASy TrEMBL
Match: A0A6J1JEC8 (uncharacterized protein LOC111486129 OS=Cucurbita maxima OX=3661 GN=LOC111486129 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 9.8e-123
Identity = 233/238 (97.90%), Postives = 234/238 (98.32%), Query Frame = 0 

Query: 33  GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS 92
           GYSSAEEEAEDTSVFNNTSSDDDDQDLV AAASTVTVNLS+RDRSLFELPQPSSH GLPS
Sbjct: 8   GYSSAEEEAEDTSVFNNTSSDDDDQDLV-AAASTVTVNLSVRDRSLFELPQPSSHHGLPS 67

Query: 93  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAKAQLVGIH 152
           AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQ RGGRRNRREKKDLPTGAVLEAKAQLVGIH
Sbjct: 68  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQLRGGRRNRREKKDLPTGAVLEAKAQLVGIH 127

Query: 153 ERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGM 212
           ERVRSDVENNQPSNPSISNTTQ GKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGM
Sbjct: 128 ERVRSDVENNQPSNPSISNTTQTGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARGM 187

Query: 213 FCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD 271
           FCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD
Sbjct: 188 FCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD 244

[Close]
BLAST of CmoCh11G014890 vs. ExPASy TrEMBL
Match: A0A5A7SL87 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002550 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.6e-111
Identity = 216/241 (89.63%), Postives = 222/241 (92.12%), Query Frame = 0 

Query: 33  GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS 92
           GYSSAEEEAE  SVFN+TSSDDDD+DL AAAASTVTVNLSIRD+SLFELPQPSS PGLPS
Sbjct: 35  GYSSAEEEAEHNSVFNHTSSDDDDEDLAAAAASTVTVNLSIRDKSLFELPQPSSQPGLPS 94

Query: 93  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPR---GGRRNRREKKDLPTGAVLEAKAQLV 152
           AFDAFSEVSGPPEFLNNSVEE+AAPRD DQPR   GGRRNR+EKKDLPTGAVLEAKAQLV
Sbjct: 95  AFDAFSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGGRRNRKEKKDLPTGAVLEAKAQLV 154

Query: 153 GIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNA 212
           GIHERVRSDVE+N  SN SISN T  GKRVATA NPNAEDAAELLRMCLHCGIPKTFSNA
Sbjct: 155 GIHERVRSDVESNHASNSSISNATAEGKRVATAANPNAEDAAELLRMCLHCGIPKTFSNA 214

Query: 213 RGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF 271
           RGMFCPLCGDRPP    EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF
Sbjct: 215 RGMFCPLCGDRPP----EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF 271

[Close]
BLAST of CmoCh11G014890 vs. ExPASy TrEMBL
Match: A0A1S3C0J1 (uncharacterized protein LOC103495434 OS=Cucumis melo OX=3656 GN=LOC103495434 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.6e-111
Identity = 216/241 (89.63%), Postives = 222/241 (92.12%), Query Frame = 0 

Query: 33  GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS 92
           GYSSAEEEAE  SVFN+TSSDDDD+DL AAAASTVTVNLSIRD+SLFELPQPSS PGLPS
Sbjct: 8   GYSSAEEEAEHNSVFNHTSSDDDDEDLAAAAASTVTVNLSIRDKSLFELPQPSSQPGLPS 67

Query: 93  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPR---GGRRNRREKKDLPTGAVLEAKAQLV 152
           AFDAFSEVSGPPEFLNNSVEE+AAPRD DQPR   GGRRNR+EKKDLPTGAVLEAKAQLV
Sbjct: 68  AFDAFSEVSGPPEFLNNSVEEYAAPRDADQPRGGHGGRRNRKEKKDLPTGAVLEAKAQLV 127

Query: 153 GIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNA 212
           GIHERVRSDVE+N  SN SISN T  GKRVATA NPNAEDAAELLRMCLHCGIPKTFSNA
Sbjct: 128 GIHERVRSDVESNHASNSSISNATAEGKRVATAANPNAEDAAELLRMCLHCGIPKTFSNA 187

Query: 213 RGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF 271
           RGMFCPLCGDRPP    EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF
Sbjct: 188 RGMFCPLCGDRPP----EPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF 244

[Close]
BLAST of CmoCh11G014890 vs. ExPASy TrEMBL
Match: A0A6J1HK72 (uncharacterized protein LOC111463799 OS=Cucurbita moschata OX=3662 GN=LOC111463799 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 5.6e-110
Identity = 213/241 (88.38%), Postives = 225/241 (93.36%), Query Frame = 0 

Query: 33  GYSSAEEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLPS 92
           GYSSAEEEAED SVFN+TSSDDDD+DL AAAAS+VT NLSIRD+SLFELPQPSSHPGLPS
Sbjct: 8   GYSSAEEEAEDNSVFNHTSSDDDDEDL-AAAASSVTFNLSIRDKSLFELPQPSSHPGLPS 67

Query: 93  AFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGG---RRNRREKKDLPTGAVLEAKAQLV 152
           AFDAFSEVSGPPEFLNNSVEE+AAPRDVDQPRGG   RRNR+EK+D PTGAV+EAKAQLV
Sbjct: 68  AFDAFSEVSGPPEFLNNSVEEYAAPRDVDQPRGGHGSRRNRKEKRDFPTGAVVEAKAQLV 127

Query: 153 GIHERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNA 212
           GIHERVRSD E+NQ SNPS+SNTTQ GKR+ATA NPNAEDAAELLRMCLHCGIPKTFSNA
Sbjct: 128 GIHERVRSDFESNQLSNPSVSNTTQQGKRMATAANPNAEDAAELLRMCLHCGIPKTFSNA 187

Query: 213 RGMFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQF 271
           RGMFCPLCGDRPP    EPDSETKKKGSTVKDKEKIKRMRGQSSHA+WKSETEM LRQQF
Sbjct: 188 RGMFCPLCGDRPP----EPDSETKKKGSTVKDKEKIKRMRGQSSHASWKSETEMHLRQQF 243

[Close]
BLAST of CmoCh11G014890 vs. TAIR 10
Match: AT5G64160.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-56
Identity = 128/239 (53.56%), Postives = 162/239 (67.78%), Query Frame = 0 

Query: 33  GYSSA-EEEAEDTSVFNNTSSDDDDQDLVAAAASTVTVNLSIRDRSLFELPQPSSHPGLP 92
           GYSSA EEEAE+ +  +  +SD+D  + V    S+   + S    S       + + GLP
Sbjct: 8   GYSSAEEEEAEERAFGDYDNSDEDGDNDVRRYESSSVFDFSASASS-------AKNAGLP 67

Query: 93  SAFDAFSEVSGPPEFLNNSVEEFAAPRDVDQPRGGRRNRREKKDLPTGAVLEAKAQLVGI 152
           SA D FS++SGPPEFLNN  E        D     R +R++KK  P G V+EAK QLVGI
Sbjct: 68  SADDVFSQISGPPEFLNNRTEADNEASARDAEHANRISRKKKKVKPKGVVMEAKPQLVGI 127

Query: 153 HERVRSDVENNQPSNPSISNTTQAGKRVATATNPNAEDAAELLRMCLHCGIPKTFSNARG 212
           HERVR+D++   PS+ S        KR++TATNPNAE++A+LLRMC+ CG+PKT+++ARG
Sbjct: 128 HERVRNDID-APPSSES------GEKRISTATNPNAEESADLLRMCVQCGVPKTYTSARG 187

Query: 213 MFCPLCGDRPPEPELEPDSETKKKGSTVKDKEKIKRMRGQSSHATWKSETEMQLRQQFD 271
           M CP+CGDRP      PD + KKKGST+KDKEK KRMRGQSSHA+WKSETEMQLRQ FD
Sbjct: 188 MVCPICGDRP-----LPDVDAKKKGSTIKDKEKSKRMRGQSSHASWKSETEMQLRQTFD 227

The following BLAST results are available for this feature:
BLAST of CmoCh11G014890 vs.
Match NameE-valueIdentityDescription
BLAST of CmoCh11G014890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EIK42.3e-127100.00uncharacterized protein LOC111434694 OS=Cucurbita moschata OX=3662 GN=LOC1114346... [more]
A0A6J1JEC89.8e-12397.90uncharacterized protein LOC111486129 OS=Cucurbita maxima OX=3661 GN=LOC111486129... [more]
A0A5A7SL876.6e-11189.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3C0J16.6e-11189.63uncharacterized protein LOC103495434 OS=Cucumis melo OX=3656 GN=LOC103495434 PE=... [more]
A0A6J1HK725.6e-11088.38uncharacterized protein LOC111463799 OS=Cucurbita moschata OX=3662 GN=LOC1114637... [more]
BLAST of CmoCh11G014890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G64160.11.2e-5653.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..270
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..180
IPR040306Os02g0753200-likePANTHERPTHR35321OS02G0753200 PROTEINcoord: 32..270

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G014890.1CmoCh11G014890.1mRNA