CmoCh11G014660 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G014660
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	protein PELPK1-like
Location	Cmo_Chr11: 10309596 .. 10310030 (+)
RNA-Seq Expression	CmoCh11G014660
Synteny	CmoCh11G014660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA

mRNA sequence

ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA

Coding sequence (CDS)

ATGGCTACTTACTTTTCGACCTTTGCATCTTCTCTCAGATTGAGTGCTTTTATGTTGACGAGCTTTGATTGTTTTGTCATAGCGGTGAGTGCGAGACATCTTTTGGAGATGCCACTACCCAAGGTGCCTGAAGAGCTTCCGAAGCCAGAACTACCCAGTTTGTCAAACCCCGAGCTTCCTCCATTGCTGAAGGTTGAGTTACCTCCTTTGGAAAAGCCTAAAGTGCCTGAATTTCCAAAACCTGAGCTCCCAAAATTACCTCAATTGCCTAAATTTGACGTACCCGAAGTACCAGAATTGCCTAATGTGCCTAAACCTGAACTCCTTAAGTTGCCGAAATTGACACCTCTCCCAAAGCCTGTTTTGCCTACCCTTCCAAAGGACATTCCTATTCCTTCGTTCAACCCACCACACACATCTACCATTAAACCTTGA

Protein sequence

MATYFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELPPLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPHTSTIKP

Homology

[Close]

BLAST of CmoCh11G014660 vs. ExPASy Swiss-Prot
Match: Q9LXB8 (Protein PELPK1 OS=Arabidopsis thaliana OX=3702 GN=PELPK1 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13
Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 36  EMPLPKVPE--ELPKPELPSL---SNPELPPLLKVELPPLEKPKVPEFPKPELPKLPQLP 95
           E+P P++P+  E+PKP+LP     S PE+P L++ E P  E PKVPE PKPELPKLP++P
Sbjct: 149 EIPKPELPKFPEIPKPDLPKFPENSKPEVPKLMETEKP--EAPKVPEIPKPELPKLPEVP 208

Query: 96  KFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPHTSTIK 144
           K + P+VPE   + KPEL K+P+L  +P+   P LPK   +P    P    I+
Sbjct: 209 KLEAPKVPE---IQKPELPKMPELPKMPEIQKPELPKLPEVPKLEAPKVPEIQ 256

[Close]

BLAST of CmoCh11G014660 vs. ExPASy Swiss-Prot
Match: Q9LXB7 (Protein PELPK2 OS=Arabidopsis thaliana OX=3702 GN=PELPK2 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-11
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 3   TYFSTFASSLRLSAFMLTSFDCFV---IAVSARHLLEMPLPKVP--EELPKPELPSLSNP 62
           T   +F++SL LS F++      +   ++V AR LLE P P++P   ELPKPE+P L   
Sbjct: 2   TLKKSFSASL-LSPFLIICLIALLSVPVSVGARRLLEEPKPEIPTFPELPKPEMPKLP-- 61

Query: 63  ELPPLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPL 122
                   E P LE PK+PE PKPE+PKLP++ K ++P  PELP +P+      PKL  L
Sbjct: 62  --------EFPKLELPKLPEIPKPEMPKLPEIQKPELPTFPELPKMPEFPKFDFPKLPEL 121

Query: 123 PKPVLPTLPKDIPIPSFNPP 138
           PK      P++  +P+F  P
Sbjct: 122 PK------PEETKVPAFTMP 124

[Close]

BLAST of CmoCh11G014660 vs. ExPASy Swiss-Prot
Match: E1BM58 (Periaxin OS=Bos taurus OX=9913 GN=PRX PE=1 SV=3)

HSP 1 Score: 48.5 bits (114), Expect = 7.3e-05
Identity = 51/129 (39.53%), Postives = 77/129 (59.69%), Query Frame = 0


Query: 27  IAVSARHLLEMPLPKVPE----ELPKPELPSLSNPE--LPPLLKVELPPLEKPKVPEFPK 86
           +AV   HL E+ LPKVPE    E+  P++P ++ PE  LP +   ++P ++ PKVPE   
Sbjct: 486 MAVPEVHLPEVQLPKVPEMKLPEVKLPKVPEMAVPEVRLPEVQLPKVPEMKLPKVPEMKC 545

Query: 87  PELPKLPQLPKFDVPEVPELPNV--PKPELLKLPKLTPLPKPVLPTLPK----DIPIPSF 144
           PE+ KLP++P+  VPEV  LP V  PK   +KLP++  LP+  LP +P+    ++ +P  
Sbjct: 546 PEM-KLPKVPEMAVPEV-RLPEVQLPKVPEVKLPEV-KLPEVKLPKVPEMAVPEVHLPEV 605

[Close]

BLAST of CmoCh11G014660 vs. ExPASy Swiss-Prot
Match: Q63425 (Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 2.1e-04
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 27  IAVSARHLLEMPLPKVPE----ELPKPELPSLSNP-------ELPPLLKVELPPLEKPKV 86
           +AV   HL E+ LPKVPE    E+  P++P ++ P       +LP + +++LP ++ PKV
Sbjct: 485 MAVPDVHLPEVKLPKVPEMKVPEMKLPKIPEMAVPDVHLPDIQLPKVPEMKLPDMKLPKV 544

Query: 87  PEFPKP-------ELPKLPQ--LPKFDVPEVPEL--PNVPKPELLKLPKLTPLPKPVLPT 144
           PE   P       +LPK+P+  LP   +P+VPE+  P+V  PE ++LPK++ +  P +P 
Sbjct: 545 PEMAVPDVHLPDIQLPKVPEMKLPDMKLPKVPEMAVPDVRIPE-VQLPKVSEVKLPKIPD 604

[Close]

BLAST of CmoCh11G014660 vs. ExPASy TrEMBL
Match: A0A6J1EJ10 (protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434586 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.1e-59
Identity = 131/144 (90.97%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MATYFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELP 60
           MATYFSTFASSL LS FMLTSFDCFV  VSARHLLEMPLPKV EEL KPELPSLS PELP
Sbjct: 1   MATYFSTFASSLILSVFMLTSFDCFVTVVSARHLLEMPLPKVFEELLKPELPSLSKPELP 60

Query: 61  PLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKP 120
           PL KVELPPLE P+VPEF KPELPKLPQLPKFDVPEVPELPNVPKPEL KLP+LTPLPKP
Sbjct: 61  PLPKVELPPLETPEVPEFSKPELPKLPQLPKFDVPEVPELPNVPKPELPKLPELTPLPKP 120

Query: 121 VLPTLPKDIPIPSFNPPHTSTIKP 145
           VLPTLPKDIPIPSFNPPHTSTIKP
Sbjct: 121 VLPTLPKDIPIPSFNPPHTSTIKP 144

[Close]

BLAST of CmoCh11G014660 vs. ExPASy TrEMBL
Match: A0A6J1JIS8 (protein PELPK2-like OS=Cucurbita maxima OX=3661 GN=LOC111486194 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.0e-58
Identity = 127/144 (88.19%), Postives = 133/144 (92.36%), Query Frame = 0


Query: 1   MATYFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELP 60
           MATYFSTF  SL LSAF L SFDCFV AVSARHLLEMPLPKVPEELPKPE+PSLS PELP
Sbjct: 1   MATYFSTFVYSLILSAFTLMSFDCFVTAVSARHLLEMPLPKVPEELPKPEVPSLSKPELP 60

Query: 61  PLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKP 120
           PL KVELPPLEKPKVPE PKPELPKLPQLPKF+VPEVP+LPN+PKPE+ KLP+LTPLPKP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKLPQLPKFEVPEVPKLPNLPKPEVPKLPELTPLPKP 120

Query: 121 VLPTLPKDIPIPSFNPPHTSTIKP 145
           VLPTLPKDIPIPSFNPPHTST KP
Sbjct: 121 VLPTLPKDIPIPSFNPPHTSTTKP 144

[Close]

BLAST of CmoCh11G014660 vs. ExPASy TrEMBL
Match: A0A6J1EHY6 (protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434525 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.5e-50
Identity = 117/144 (81.25%), Postives = 124/144 (86.11%), Query Frame = 0


Query: 1   MATYFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELP 60
           MATYF TF SS  LSAFM  SFDCFVIAVSARHLLEMPL KVPEELPKPE+PSLS  ELP
Sbjct: 1   MATYFLTFVSSFILSAFMFVSFDCFVIAVSARHLLEMPLSKVPEELPKPEVPSLSKLELP 60

Query: 61  PLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPLPKP 120
           PL KVELPPLEKPK  E PK ELPKL QL KF+VP+VP+LPN+PKP+L KLP+LTPLPKP
Sbjct: 61  PLPKVELPPLEKPKESELPKSELPKLSQLSKFEVPKVPKLPNLPKPKLPKLPELTPLPKP 120

Query: 121 VLPTLPKDIPIPSFNPPHTSTIKP 145
            LPTLPKDIPIPSFNP HTST KP
Sbjct: 121 DLPTLPKDIPIPSFNPSHTSTTKP 144

[Close]

BLAST of CmoCh11G014660 vs. ExPASy TrEMBL
Match: A0A6J1EM16 (protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434585 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.4e-43
Identity = 117/210 (55.71%), Postives = 126/210 (60.00%), Query Frame = 0


Query: 1   MATYFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELP 60
           MAT FSTF   L LSAFML +FD FV+ VSARHLLE PLPKVPEELPKPE+P LS PELP
Sbjct: 1   MATRFSTFVFPLILSAFMLMNFDFFVMTVSARHLLESPLPKVPEELPKPEVPILSKPELP 60

Query: 61  PLLKVELPPLEKPKVPEFP----------------------------------------- 120
           PL KVELPPLEKPKVPE P                                         
Sbjct: 61  PLPKVELPPLEKPKVPELPKPELPKVPQLPPLEKPKVPELSKPELPKLPQLPPLEKPKVL 120

Query: 121 -------------------------KPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKL 145
                                    KPELPKLP+LPK +VPEVP+LPN+PKPEL KLP+ 
Sbjct: 121 ELSKPELPKLPQLSPLEERKVPELSKPELPKLPELPKLEVPEVPKLPNLPKPELPKLPEF 180

[Close]

BLAST of CmoCh11G014660 vs. ExPASy TrEMBL
Match: A0A6J1EPY6 (protein PELPK1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434584 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.5e-40
Identity = 118/229 (51.53%), Postives = 126/229 (55.02%), Query Frame = 0


Query: 1   MATYFSTFASSLRLSAFMLTSFDCFVIAVSARHLLEMPLPKVPEELPKPELPSLSNPELP 60
           MAT FSTF  SL LS  ML SFDCFV+ VSARHLLE P+PKVPEELPKPE+PSLS PELP
Sbjct: 1   MATRFSTFVFSLILSVSMLMSFDCFVMTVSARHLLETPVPKVPEELPKPEVPSLSKPELP 60

Query: 61  PLLKVELP--------------------------------------------PLEKPKVP 120
           PL KVELP                                            PLEKPKVP
Sbjct: 61  PLPKVELPPLEKPKVPELPKPKLPKVPQLPPLEKLKVPELPKPELPKLPQLSPLEKPKVP 120

Query: 121 EFPKPELPKLPQLPKFDVPEVPEL------------------------------------ 145
           E PKPELPKLPQLP  + P++PEL                                    
Sbjct: 121 ELPKPELPKLPQLPPLEKPKMPELSKPEVPKLPQFPPLEKPKMPELSKLELPTLPQLPKL 180

[Close]

BLAST of CmoCh11G014660 vs. TAIR 10
Match: AT5G09530.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14
Identity = 53/113 (46.90%), Postives = 73/113 (64.60%), Query Frame = 0


Query: 36  EMPLPKVPE--ELPKPELPSL---SNPELPPLLKVELPPLEKPKVPEFPKPELPKLPQLP 95
           E+P P++P+  E+PKP+LP     S PE+P L++ E P  E PKVPE PKPELPKLP++P
Sbjct: 149 EIPKPELPKFPEIPKPDLPKFPENSKPEVPKLMETEKP--EAPKVPEIPKPELPKLPEVP 208

Query: 96  KFDVPEVPELPNVPKPELLKLPKLTPLPKPVLPTLPKDIPIPSFNPPHTSTIK 144
           K + P+VPE   + KPEL K+P+L  +P+   P LPK   +P    P    I+
Sbjct: 209 KLEAPKVPE---IQKPELPKMPELPKMPEIQKPELPKLPEVPKLEAPKVPEIQ 256

[Close]

BLAST of CmoCh11G014660 vs. TAIR 10
Match: AT5G09520.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 70.9 bits (172), Expect = 9.7e-13
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 3   TYFSTFASSLRLSAFMLTSFDCFV---IAVSARHLLEMPLPKVP--EELPKPELPSLSNP 62
           T   +F++SL LS F++      +   ++V AR LLE P P++P   ELPKPE+P L   
Sbjct: 2   TLKKSFSASL-LSPFLIICLIALLSVPVSVGARRLLEEPKPEIPTFPELPKPEMPKLP-- 61

Query: 63  ELPPLLKVELPPLEKPKVPEFPKPELPKLPQLPKFDVPEVPELPNVPKPELLKLPKLTPL 122
                   E P LE PK+PE PKPE+PKLP++ K ++P  PELP +P+      PKL  L
Sbjct: 62  --------EFPKLELPKLPEIPKPEMPKLPEIQKPELPTFPELPKMPEFPKFDFPKLPEL 121

Query: 123 PKPVLPTLPKDIPIPSFNPP 138
           PK      P++  +P+F  P
Sbjct: 122 PK------PEETKVPAFTMP 124

The following BLAST results are available for this feature:

BLAST of CmoCh11G014660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXB8	1.5e-13	46.90	Protein PELPK1 OS=Arabidopsis thaliana OX=3702 GN=PELPK1 PE=2 SV=1	[more]
Q9LXB7	1.4e-11	40.71	Protein PELPK2 OS=Arabidopsis thaliana OX=3702 GN=PELPK2 PE=3 SV=1	[more]
E1BM58	7.3e-05	39.53	Periaxin OS=Bos taurus OX=9913 GN=PRX PE=1 SV=3	[more]
Q63425	2.1e-04	35.00	Periaxin OS=Rattus norvegicus OX=10116 GN=Prx PE=1 SV=2	[more]

BLAST of CmoCh11G014660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ10	9.1e-59	90.97	protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434586 PE=4 SV=1	[more]
A0A6J1JIS8	2.0e-58	88.19	protein PELPK2-like OS=Cucurbita maxima OX=3661 GN=LOC111486194 PE=4 SV=1	[more]
A0A6J1EHY6	4.5e-50	81.25	protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434525 PE=4 SV=1	[more]
A0A6J1EM16	2.4e-43	55.71	protein PELPK1-like OS=Cucurbita moschata OX=3662 GN=LOC111434585 PE=4 SV=1	[more]
A0A6J1EPY6	2.5e-40	51.53	protein PELPK1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111434584 PE=...	[more]

BLAST of CmoCh11G014660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09530.1	1.0e-14	46.90	hydroxyproline-rich glycoprotein family protein	[more]
AT5G09520.1	9.7e-13	40.71	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..144
None	No IPR available	PANTHER	PTHR47641:SF4	SUBFAMILY NOT NAMED	coord: 75..130 coord: 9..87
None	No IPR available	PANTHER	PTHR47641	PERIAXIN-LIKE	coord: 75..130 coord: 9..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G014660.1	CmoCh11G014660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane