CmoCh11G014160 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G014160
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Cmo_Chr11: 9957496 .. 9961908 (+)
RNA-Seq Expression	CmoCh11G014160
Synteny	CmoCh11G014160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGTTAGCAGAACAGCGAGTGACCTCGATCAGAGAAGAAGTCGAAGACCTCAAAAAATTTATCGGCAAAATCCGGCCAAGCTTCACACCTGGCCTTCTCCATGGCGACTTCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCATTTCTTTTCGGTACCCATCTCCCTTTCCCCTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTTTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTGTAAGTTTCCGATATTGAACTGTCTGGCCGGAATCATTATATCATTTGAAGTTATTTATTTGATTCCGTTCGTTTTCTGATGAAATTAATTGATTGTTTGGTAACTTGGAAAATTTCTGTTCGTTCTGCGTTTTCTTTTCATGTGTTCTTGATGATTTGTGGTGGTCTTTCGATGGCCGGAGATTTTGGAGAGAGTAAATTTAATCTTGTATTAATAATAGTTTAAGACAGAGTGCAACTGGTCGACAGTAAACTGAAATTGCTACCTCATTGGGGAGTTGTCTTTGAATCCACGTTCATTTTTCTTTTGTTAATTCTAGTTCCATCGTTATTTTCATGAGTTTGATCCTGACGAAAATAAACAATATCATTGCCTAAATCTCCATATCTCCTGTTCTTATAGTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGTTCTTTTCTCATTTGATCTTGAGAGTTCAGTAATTTCTATAAATTTGCAAATCCATAGAAACAGGCACATTTACTTTTTGCTGGAAGCTCAGTATTGTTCAAGCCAAGCATTATTATTGTGCTTTAGTAACCACAACGATTGCTTGTTACCTGGCAGGAAAGCATCTCATCCGCCCACAGCTATTTGACTAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCCGTGAGCCACTAAAATATTTATTCTTTACTCAATTCTACTTTGCAAGATATTTTTTCTCAGGGGTACATCACTGTATTTTGTTGAAATAAATGCAGATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGGTTATTAATTGATATTTCCTTAATCCATGAAGTATTATATTTCCTGTTCTAACGAAGCTTGTACTATCGTTGTAATCTTCATTGTTTTGACCATCTTGTTATTTTAATATTCAAGACCTAGTTTTTGTTGCTTTGGTGCTTGTTGATAACTTAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTGTAAGTAGTCTCTTCCTTAACTGAAGTTAATTCCTTTTGTCCAATATTTGTCATTGAATAACTACGTACCTGGTCTTTGAATTTGTTGGTAAAATGCATTCCTTGAAAAAGAAAAAAAAAAATTGATCAGTAAGAAAAATGGAAGTTGGGGAGGTTATAAAAATAAAAAGAAGGCAACGACCATCGTAGGAGCCGCCAAAAATGAACAAACAGGAATCAATATTACAAGAGAGCTCCGGTTGCTGGTAGTAAAAGCGAAGGGAAATCTCTATAAGAATCCATGGCAGAAATCAAAAGGAAGTGTTGAAGTGAGCATATGCCATATCTTTTCCATAGAGAGCATTCCCATCTTGAAAGATCTTGTGTTCCTTGCTGTCAAATATTCCTTAAGATAGCGAAAAAAACAGCGTACTATGATGGCCCTCCTTCATCCTAAAACAGGAGTTATAGAAGGATTTCCATCCGATATGGACCGATAGTACCAACTTTAGGCTGGTCTTCAAAAACCTCCCTAAACATAAGCAGAAAAAGAGTAATGTCAAAGCATGTGATTCTTTTGCCCCGACATTACCCAGCTCTGCCCCTAGAGTTAGTATACCAATGTGGACCTAAGCTCGAAGTAGTTAATATTGGGTTAAAGAGTACGGAGTTAATTCTTCCCATGTATGATGAGCCAGGTACAGAGCTTTGTCTTCTTCAAGATGGATATTAACCTTCCACAGCTTACCGAGTTTATGAAACACACCTATTGAAAGAAGTTTTCTTTCTTCTTCTTTTTGTTTTATTTATATTTATTTATTATTATTATTATTTTTTTGCAAGCTAAAGCCCAAGTAGATGAGTTGTTCCTCAAGATTTTAAAACGCGTTTGCTAGGGGAGATGTTTCCACACCCTTTATAAGGAATGCTTCGTTCCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCTCTGGGTGCCCAACGTCCTGGCTTGCACACCACCCGTTGTCTGACTCTGATACCATTTGTAACAGCCTAAGCTCACCGCTAGCAAATATTGTCCTCTTTGGGCTTCCCTTCTGGACTTTTCCTCAAGGTTTTAAAACGCGTCTGCTAGAGAGAGGTTTCATACCCTTACAAGGAATGCTTCATTTCCCTCTCCAACTAAGGTGAGATTCCATATCAGGTCATAAAGTGATGATTAAAGTGATGATTGGAAAAAGATTTATAATTTAAGAAATTCCAAATGACTGGGAGATCAAACTTGATATTTGTGGAATCCAAAATGGTGGAAGATAGTCCCTTGAATGAAGGATTAAAAGGGAAATATACCAGCTTCATCCCCTTTATCACGTAAAGCTTTCTTACATTGGAAGTAAACCGAGGACCCAGAGACATTTTCTCCTACCTGATGATAGCTTATTAATCCATCAACGTCGGCTGCTAAATTATTTTATGATAAGTAAACATGTGCCAAAATAAAACCGTATCAATAGTTTATGATTTAGTTACTTCGTTGTTTTTATTATGCCATCAACAAGGTCTCAGCTTAATTCTTTTTACATCTGTGTAGTATTGCAAACCGGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGGTACGTTCCTCGCCTCTTAAAACTGATACATAATTCTTTCATTTTGCATAATTCTGCATGCTCATCAACCATCCAGGATTATGGTAACTTGTTTTTTCCGGGCTTGCGAGGATCATTCCTTTCCTTTTTGACCATTGTCTTTCATGATTGCAGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGTACGCATACTTCCCTCTCTCTGTTGAGCTTTAGCCAGTGTCTCCCTCTCATTATCCTGGAACTCGTCTTAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATATTCAACGACCCAAGTACTTCAATCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCCTTCGAAAAGAGGGTCATTATCACATACATTTCTCTCTCTCTCTCGTTTTCTTTTAAGATGCTTTGAATTTCGTCACGCAAGTCTAACATTTTGCTTCTACAATCAGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAATTCAGAAGTGTAGAAATAGAAGGATACATAACCCCACTCTTTCCTAGCTAGCTGCTACCCCCTGGATGGGCTTTATAATTCCTTCTTTCTTGGGGTGGGGTGTTTTGGTTTACTTCTGAAGGCTTGACTAATGAATGAACATCAGCAATGTGATCTTTATAGGCGGTTTGTATATTGAAAAACTCTCTCTCATTTAGGTCTAGTTCTGTGTTTTTAAGGTTATTATGATTTTGTGATGTTTACTCACACTTGCTCTTGCTCTTGCAATCGTATGCGATGCGAGCCAGTCCTTGCTAGAGAACGTTCATTCGTTTCAAGCTGCCTGTTTCGCATCGCCAGTCCTTGCTAGAGAACGTTCTTTCGTTTCAAGCTGCCTGTTTGTTCATTCGCTTTAGTGTGCTATAAGATATTTTTTATTATGATTCGAACATCAGACTTAAATTTAAAGAAAATTCTCTAATTCTCTAAATAAGAGAAGTGTCGG

mRNA sequence

GTTGTTAGCAGAACAGCGAGTGACCTCGATCAGAGAAGAAGTCGAAGACCTCAAAAAATTTATCGGCAAAATCCGGCCAAGCTTCACACCTGGCCTTCTCCATGGCGACTTCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCATTTCTTTTCGGTACCCATCTCCCTTTCCCCTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTTTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGAAAGCATCTCATCCGCCCACAGCTATTTGACTAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCCATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTTATTGCAAACCGGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATATTCAACGACCCAAGTACTTCAATCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCCTTCGAAAAGAGGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAATTCAGAAGTGTAGAAATAGAAGGATACATAACCCCACTCTTTCCTAGCTAGCTGCTACCCCCTGGATGGGCTTTATAATTCCTTCTTTCTTGGGGTGGGGTGTTTTGGTTTACTTCTGAAGGCTTGACTAATGAATGAACATCAGCAATGTGATCTTTATAGGCGGTTTGTATATTGAAAAACTCTCTCTCATTTAGGTCTAGTTCTGTGTTTTTAAGGTTATTATGATTTTGTGATGTTTACTCACACTTGCTCTTGCTCTTGCAATCGTATGCGATGCGAGCCAGTCCTTGCTAGAGAACGTTCATTCGTTTCAAGCTGCCTGTTTCGCATCGCCAGTCCTTGCTAGAGAACGTTCTTTCGTTTCAAGCTGCCTGTTTGTTCATTCGCTTTAGTGTGCTATAAGATATTTTTTATTATGATTCGAACATCAGACTTAAATTTAAAGAAAATTCTCTAATTCTCTAAATAAGAGAAGTGTCGG

Coding sequence (CDS)

ATGGCGACTTCTTCACCTCTTCATATCTCTGCTACGCCGTCGTTGGCCGTCGGCAGCTCAAAGTCATCATTTCTTTTCGGTACCCATCTCCCTTTCCCCTCCTCTCGCCCAAGAACTTCATATCGCAGATACTTTTTTTCTCCCTCTGCCAAAAAATCGATGGACCACATTCCTAAGCAATTCAGAGAAGAGAATCTCAAAGATGGCTTGATGGAGAACTACGAGAACGTTCCTCAATCACTTTATGGCCTTACACCTTCACAACTGGACATGTTCATGACAGAAGATAATCCTGTCAGGCGACAGTCAGAATTAGTTACTGAGGAAAGCATCTCATCCGCCCACAGCTATTTGACTAATGGTGGAATGTGGAGTCTATCAGGCATGGATGGAAAAAAGGGTCCATCAAAATATAGTATGAGCGCTAGTATGTATCGTGGGGGAGGAAGGGGATATGGGCGACGCCAATCAGCTCCTCCTGATTTGCCTTCTTTGCTCTTGGACGCTCGTATAGTCTATTTGGGCATGCCCATCGTACCAGCAGTGACTGAGCTTCTTGTTGCTCAGTTTATGTGGCTAGACTATGATAACCCATCAAAGCCTATATATCTCTACATAAACTCTCCGGGGACGCAGAATGAGAAGATGGAGAATGTTGGATTCGAAACTGAAGCATATGCTATAGCAGATATGATGGCTTATTGCAAACCGGATGTCTATACTATAAACTGCGGAATGGCATTCGGTCAAGCAGCAATGCTTTTGTCACTTGGAACCAAGGGTTACCGTGCTGTCCAGCCTAACTCCTCCGCTAAACTGTATCTGCCTAAAGTTAGTAGATCAAGTGGTGCGGTCATAGATATGTGGATTAAGGCCAGAGAACTCGATGCCAACACCGATTACTATATCGAGCTATTAGCTAAAGGAACTGGTAAACCCGCGGAAGAGATTGCTAAAGATATTCAACGACCCAAGTACTTCAATCCCCAAGAAGCCATTGACTATGGCCTTGTAGACAAGATAATCAGCTCGCGGGATTCTGCCTTCGAAAAGAGGAACTACGACGATATGCTTGCGCAGTCGAGAGCCATGAGGAAAGGAGCCGGAGGCAATCCACAAGCCGCGCCATCCGGGTTGAGGTAA

Protein sequence

MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTNGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR

Homology

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BLAST of CmoCh11G014160 vs. ExPASy Swiss-Prot
Match: Q9XJ35 (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR1 PE=1 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 5.4e-140
Identity = 260/360 (72.22%), Postives = 301/360 (83.61%), Query Frame = 0


Query: 23  SFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLY 82
           S LF +++P  S+ PR + R + F+ +   S DHIPKQFR +NLKDG+M+N++NVPQ  Y
Sbjct: 33  SKLFSSNMPC-STVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFY 92

Query: 83  GLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTNGGMWSLSGMDGKKGPSKYSMSA 142
           GL  +Q+DMFMTED+PVRRQ+E VTEESISS ++YL NGG+WS+SGM+      +YSMS 
Sbjct: 93  GLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADA-RRYSMSV 152

Query: 143 SMYRGGGRGYG--RRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSK 202
            MYRGGG G G  R ++APPDLPSLLLDARI YLGMPIVPAVTELLVAQFMWLDYDNP+K
Sbjct: 153 QMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTK 212

Query: 203 PIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTK 262
           PIYLYINSPGTQNEKME VG ETEAYAIAD ++YCK DVYTINCGMAFGQAAMLLSLG K
Sbjct: 213 PIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 272

Query: 263 GYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKD 322
           GYRAVQP+SS KLYLPKV+RSSGA IDMWIKA+ELDANT+YYIELLAKGTGK  E+I +D
Sbjct: 273 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 332

Query: 323 IQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           I+RPKY   Q AIDYG+ DKI  S+DS+FEKR+YD  LAQ RAMR G GG+P AAP+GLR
Sbjct: 333 IKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQ-RAMRPG-GGSP-AAPAGLR 387

[Close]

BLAST of CmoCh11G014160 vs. ExPASy Swiss-Prot
Match: Q8L770 (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR3 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.5e-44
Identity = 94/210 (44.76%), Postives = 138/210 (65.71%), Query Frame = 0


Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDIQRPKYFNPQEAIDYGLVDKII 343
             E +A  ++RP Y +  +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]

BLAST of CmoCh11G014160 vs. ExPASy Swiss-Prot
Match: Q9L4P4 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=clpR PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.1e-43
Identity = 90/200 (45.00%), Postives = 130/200 (65.00%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPA----------VTELLVAQFMWLDYDNPSKPIYLY 215
           ++ PPDLPSLLL  RI+YLGMP+  +          VTEL++AQ ++L++DNP KPIY Y
Sbjct: 19  RTPPPDLPSLLLKERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFY 78

Query: 216 INSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAV 275
           INS GT     + +G+ETEA+AI D M Y KP V+TI  G A G AAM+LS GT G RA 
Sbjct: 79  INSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRAS 138

Query: 276 QPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPK 335
            P+++  L  P+   + G   D+ I+A+E+ AN    +E+ A+ TG+  + +A+D  R  
Sbjct: 139 LPHATIVLNQPRTG-AQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRML 198

Query: 336 YFNPQEAIDYGLVDKIISSR 346
           Y  P +A++YGL+D+++ SR
Sbjct: 199 YMTPAQAVEYGLIDRVLDSR 217

[Close]

BLAST of CmoCh11G014160 vs. ExPASy Swiss-Prot
Match: Q8LB10 (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR4 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.7e-43
Identity = 86/202 (42.57%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           +  PPDL S L   RIVYLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  + 
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKN 159

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
            E +G++TEA+AI D+M Y KP ++T+  G A+G+AA+LL+ G KG R+  P+S+  +  
Sbjct: 160 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 219

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDY 335
           P ++R  G   D+ I  +E+       ++L +K  GK  E+I  D++RPKYF+P EA++Y
Sbjct: 220 P-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 279

Query: 336 GLVDKIISSRDSAFEKRNYDDM 358
           G++DK++ +   + ++    D+
Sbjct: 280 GIIDKVVYNERGSQDRGVVSDL 299

[Close]

BLAST of CmoCh11G014160 vs. ExPASy Swiss-Prot
Match: P74466 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=clpR PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.2e-42
Identity = 90/199 (45.23%), Postives = 129/199 (64.82%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPA----------VTELLVAQFMWLDYDNPSKPIYLY 215
           ++ PPDL SLLL  RIVYLGMP+  +          VT+L++AQ ++L +D+P KPIY Y
Sbjct: 17  KTPPPDLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFY 76

Query: 216 INSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAV 275
           INS GT     + VGFETEA+AI D + Y KP V+TI  G A G AAM+LS GTKGYRA 
Sbjct: 77  INSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRAS 136

Query: 276 QPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPK 335
            P+++  L   +   + G   D+ I+A+E+ +N    +E+L+  TG+  E++AKD+ R  
Sbjct: 137 LPHATIVLNQNRTG-AQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTF 196

Query: 336 YFNPQEAIDYGLVDKIISS 345
           Y  P +A +YGL+D+++ S
Sbjct: 197 YLTPAQAKEYGLIDRVLES 214

[Close]

BLAST of CmoCh11G014160 vs. ExPASy TrEMBL
Match: A0A6J1EI06 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111434540 PE=3 SV=1)

HSP 1 Score: 755.4 bits (1949), Expect = 1.2e-214
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ 60
           MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ
Sbjct: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN
Sbjct: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD
Sbjct: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ
Sbjct: 301 YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           SRAMRKGAGGNPQAAPSGLR
Sbjct: 361 SRAMRKGAGGNPQAAPSGLR 380

[Close]

BLAST of CmoCh11G014160 vs. ExPASy TrEMBL
Match: A0A6J1JNF4 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111486048 PE=3 SV=1)

HSP 1 Score: 745.0 bits (1922), Expect = 1.6e-211
Identity = 373/380 (98.16%), Postives = 375/380 (98.68%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ 60
           MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYF SPSAKKSMDHIPKQ
Sbjct: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFLSPSAKKSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FREENLKDGLMENY+N PQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN
Sbjct: 61  FREENLKDGLMENYKNAPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           TINCGMAFGQAAMLLSLGTKGYRA QPNSS KLYLPKVSRSSGAVIDMWIKARELDANTD
Sbjct: 241 TINCGMAFGQAAMLLSLGTKGYRAAQPNSSTKLYLPKVSRSSGAVIDMWIKARELDANTD 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YYIELLAKGTGKP EEIAKD+QRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ
Sbjct: 301 YYIELLAKGTGKPVEEIAKDVQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           SRAMRKGAGGNPQAAPSGLR
Sbjct: 361 SRAMRKGAGGNPQAAPSGLR 380

[Close]

BLAST of CmoCh11G014160 vs. ExPASy TrEMBL
Match: A0A6J1D6K6 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111017400 PE=3 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.3e-177
Identity = 319/381 (83.73%), Postives = 344/381 (90.29%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAK-KSMDHIPK 60
           MATSS  ++SA PSLA+ SSKS F+ GT L FPSSR RT+ RRYF SPSAK  SMDHIPK
Sbjct: 1   MATSSLSNLSAPPSLAIDSSKSFFICGTQLSFPSSRSRTTCRRYFLSPSAKNSSMDHIPK 60

Query: 61  QFREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLT 120
           +FR ENLKDGLMENY+N PQ LYGLTPSQ+DMFMTEDNP+RRQSELVTEE+ISS+H+YL 
Sbjct: 61  KFRGENLKDGLMENYKNAPQYLYGLTPSQMDMFMTEDNPIRRQSELVTEENISSSHNYLN 120

Query: 121 NGGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIV 180
           +GGMWSLSGM+  KGPSKYSMS SMYRGGGRG GR ++APPDLPSLLLDARI YLGMPIV
Sbjct: 121 HGGMWSLSGMN-DKGPSKYSMSVSMYRGGGRGSGRPRTAPPDLPSLLLDARICYLGMPIV 180

Query: 181 PAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDV 240
           PAVTELLVAQFMWLDYDNPSKPIYLYINS GTQNEKME VG ETEAYAIADMMAYCK DV
Sbjct: 181 PAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADMMAYCKSDV 240

Query: 241 YTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANT 300
           YT+NCGMA+GQAAMLLSLGTKGYRAVQPNSS KLYLPKV+RSSGAVIDMWIKA+ELDANT
Sbjct: 241 YTVNCGMAYGQAAMLLSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKELDANT 300

Query: 301 DYYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLA 360
           +YYIELLAKG GKP EEI KD+QRPKYF  QEA+DYGL DKII S+DSAFEKRNYD+MLA
Sbjct: 301 EYYIELLAKGIGKPKEEITKDVQRPKYFQAQEAVDYGLADKIIDSQDSAFEKRNYDEMLA 360

Query: 361 QSRAMRKGAGGNPQAAPSGLR 381
           QSRAMRKG GGNPQAAPSG R
Sbjct: 361 QSRAMRKGVGGNPQAAPSGFR 380

[Close]

BLAST of CmoCh11G014160 vs. ExPASy TrEMBL
Match: A0A5A7SMD0 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001180 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.2e-174
Identity = 311/380 (81.84%), Postives = 344/380 (90.53%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSLA+ SSKSSFL GT LP PSSR RTS RRY  SPSA++SMDHIPKQ
Sbjct: 28  MATSSLFHLSAPPSLAIDSSKSSFLCGTQLPLPSSRLRTSCRRYVLSPSAQQSMDHIPKQ 87

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FR ENLKDGL+ENY+N P+ LYGLTPSQ+DMFMTEDNPVRRQSELVTE++ISS+++YL +
Sbjct: 88  FRGENLKDGLIENYKNAPKYLYGLTPSQMDMFMTEDNPVRRQSELVTEQNISSSYNYLNH 147

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDG KGP+KYSMS SMYRGGGR  GR ++APPDLPSLLLDARIVYLGMPIVP
Sbjct: 148 GGMWSLTGMDG-KGPAKYSMSVSMYRGGGRAAGRPRNAPPDLPSLLLDARIVYLGMPIVP 207

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYA+ DMM+YCK DVY
Sbjct: 208 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYALGDMMSYCKSDVY 267

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           T+N GMAFGQAAMLLSLGTKGYRA+QPNSS KLYLPKV+RSSG VIDMWIKA+ELDANT+
Sbjct: 268 TVNVGMAFGQAAMLLSLGTKGYRALQPNSSTKLYLPKVNRSSGTVIDMWIKAKELDANTE 327

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KDIQR KYF  QEAIDYG+ DKII+S+DSAFEKRNYD+MLAQ
Sbjct: 328 YYLELLAKGIGKPKEEITKDIQRSKYFQAQEAIDYGIADKIITSQDSAFEKRNYDEMLAQ 387

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           S+A R+GAGGNPQAAP+G R
Sbjct: 388 SKAARRGAGGNPQAAPTGFR 406

[Close]

BLAST of CmoCh11G014160 vs. ExPASy TrEMBL
Match: A0A1S3BZX8 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103495302 PE=3 SV=1)

HSP 1 Score: 622.5 bits (1604), Expect = 1.2e-174
Identity = 311/380 (81.84%), Postives = 344/380 (90.53%), Query Frame = 0


Query: 1   MATSSPLHISATPSLAVGSSKSSFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQ 60
           MATSS  H+SA PSLA+ SSKSSFL GT LP PSSR RTS RRY  SPSA++SMDHIPKQ
Sbjct: 1   MATSSLFHLSAPPSLAIDSSKSSFLCGTQLPLPSSRLRTSCRRYVLSPSAQQSMDHIPKQ 60

Query: 61  FREENLKDGLMENYENVPQSLYGLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTN 120
           FR ENLKDGL+ENY+N P+ LYGLTPSQ+DMFMTEDNPVRRQSELVTE++ISS+++YL +
Sbjct: 61  FRGENLKDGLIENYKNAPKYLYGLTPSQMDMFMTEDNPVRRQSELVTEQNISSSYNYLNH 120

Query: 121 GGMWSLSGMDGKKGPSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVP 180
           GGMWSL+GMDG KGP+KYSMS SMYRGGGR  GR ++APPDLPSLLLDARIVYLGMPIVP
Sbjct: 121 GGMWSLTGMDG-KGPAKYSMSVSMYRGGGRAAGRPRNAPPDLPSLLLDARIVYLGMPIVP 180

Query: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVY 240
           AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKME VG ETEAYA+ DMM+YCK DVY
Sbjct: 181 AVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEKMETVGSETEAYALGDMMSYCKSDVY 240

Query: 241 TINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTD 300
           T+N GMAFGQAAMLLSLGTKGYRA+QPNSS KLYLPKV+RSSG VIDMWIKA+ELDANT+
Sbjct: 241 TVNVGMAFGQAAMLLSLGTKGYRALQPNSSTKLYLPKVNRSSGTVIDMWIKAKELDANTE 300

Query: 301 YYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQ 360
           YY+ELLAKG GKP EEI KDIQR KYF  QEAIDYG+ DKII+S+DSAFEKRNYD+MLAQ
Sbjct: 301 YYLELLAKGIGKPKEEITKDIQRSKYFQAQEAIDYGIADKIITSQDSAFEKRNYDEMLAQ 360

Query: 361 SRAMRKGAGGNPQAAPSGLR 381
           S+A R+GAGGNPQAAP+G R
Sbjct: 361 SKAARRGAGGNPQAAPTGFR 379

[Close]

BLAST of CmoCh11G014160 vs. TAIR 10
Match: AT1G49970.1 (CLP protease proteolytic subunit 1 )

HSP 1 Score: 498.8 bits (1283), Expect = 3.8e-141
Identity = 260/360 (72.22%), Postives = 301/360 (83.61%), Query Frame = 0


Query: 23  SFLFGTHLPFPSSRPRTSYRRYFFSPSAKKSMDHIPKQFREENLKDGLMENYENVPQSLY 82
           S LF +++P  S+ PR + R + F+ +   S DHIPKQFR +NLKDG+M+N++NVPQ  Y
Sbjct: 33  SKLFSSNMPC-STVPRRTRRSHCFASAKDMSFDHIPKQFRGDNLKDGVMQNFKNVPQYFY 92

Query: 83  GLTPSQLDMFMTEDNPVRRQSELVTEESISSAHSYLTNGGMWSLSGMDGKKGPSKYSMSA 142
           GL  +Q+DMFMTED+PVRRQ+E VTEESISS ++YL NGG+WS+SGM+      +YSMS 
Sbjct: 93  GLNSAQMDMFMTEDSPVRRQAEKVTEESISSRNNYLNNGGIWSMSGMNAADA-RRYSMSV 152

Query: 143 SMYRGGGRGYG--RRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSK 202
            MYRGGG G G  R ++APPDLPSLLLDARI YLGMPIVPAVTELLVAQFMWLDYDNP+K
Sbjct: 153 QMYRGGGGGGGSERPRTAPPDLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTK 212

Query: 203 PIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTK 262
           PIYLYINSPGTQNEKME VG ETEAYAIAD ++YCK DVYTINCGMAFGQAAMLLSLG K
Sbjct: 213 PIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKK 272

Query: 263 GYRAVQPNSSAKLYLPKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKD 322
           GYRAVQP+SS KLYLPKV+RSSGA IDMWIKA+ELDANT+YYIELLAKGTGK  E+I +D
Sbjct: 273 GYRAVQPHSSTKLYLPKVNRSSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINED 332

Query: 323 IQRPKYFNPQEAIDYGLVDKIISSRDSAFEKRNYDDMLAQSRAMRKGAGGNPQAAPSGLR 381
           I+RPKY   Q AIDYG+ DKI  S+DS+FEKR+YD  LAQ RAMR G GG+P AAP+GLR
Sbjct: 333 IKRPKYLQAQAAIDYGIADKIADSQDSSFEKRDYDGTLAQ-RAMRPG-GGSP-AAPAGLR 387

[Close]

BLAST of CmoCh11G014160 vs. TAIR 10
Match: AT1G09130.1 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 179.9 bits (455), Expect = 3.9e-45
Identity = 94/210 (44.76%), Postives = 138/210 (65.71%), Query Frame = 0


Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDIQRPKYFNPQEAIDYGLVDKII 343
             E +A  ++RP Y +  +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]

BLAST of CmoCh11G014160 vs. TAIR 10
Match: AT1G09130.2 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 179.9 bits (455), Expect = 3.9e-45
Identity = 94/210 (44.76%), Postives = 138/210 (65.71%), Query Frame = 0


Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDIQRPKYFNPQEAIDYGLVDKII 343
             E +A  ++RP Y +  +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]

BLAST of CmoCh11G014160 vs. TAIR 10
Match: AT1G09130.3 (ATP-dependent caseinolytic (Clp) protease/crotonase family protein )

HSP 1 Score: 179.9 bits (455), Expect = 3.9e-45
Identity = 94/210 (44.76%), Postives = 138/210 (65.71%), Query Frame = 0


Query: 135 PSKYSMSASMYRGGGRGYGRRQSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLD 194
           P   S  A + R       R ++ PPDLPS+LLD RIVY+GMP+VPAVTEL+VA+ M+L 
Sbjct: 95  PQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQ 154

Query: 195 YDNPSKPIYLYINSPGTQNEKMENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAML 254
           + +P +PIY+YINS GT  +  E VG E+E +AI D +   K +V+T+  G A GQA +L
Sbjct: 155 WLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLL 214

Query: 255 LSLGTKGYRAVQPNSSAKLYLPKVSRSSGAV--IDMWIKARELDANTDYYIELLAKGTGK 314
           LS GTKG R + P++ A +  P+V  SSG +   D+ I+A+E+  N D  +ELL+K TG 
Sbjct: 215 LSAGTKGKRFMMPHAKAMIQQPRVP-SSGLMPASDVLIRAKEVITNRDILVELLSKHTGN 274

Query: 315 PAEEIAKDIQRPKYFNPQEAIDYGLVDKII 343
             E +A  ++RP Y +  +A ++G++D+I+
Sbjct: 275 SVETVANVMRRPYYMDAPKAKEFGVIDRIL 303

[Close]

BLAST of CmoCh11G014160 vs. TAIR 10
Match: AT4G17040.1 (CLP protease R subunit 4 )

HSP 1 Score: 177.6 bits (449), Expect = 1.9e-44
Identity = 86/202 (42.57%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 156 QSAPPDLPSLLLDARIVYLGMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSPGTQNEK 215
           +  PPDL S L   RIVYLGM +VP+VTEL++A+F++L Y++  KPIYLYINS GT  + 
Sbjct: 100 EQPPPDLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGT-TKN 159

Query: 216 MENVGFETEAYAIADMMAYCKPDVYTINCGMAFGQAAMLLSLGTKGYRAVQPNSSAKLYL 275
            E +G++TEA+AI D+M Y KP ++T+  G A+G+AA+LL+ G KG R+  P+S+  +  
Sbjct: 160 GEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQ 219

Query: 276 PKVSRSSGAVIDMWIKARELDANTDYYIELLAKGTGKPAEEIAKDIQRPKYFNPQEAIDY 335
           P ++R  G   D+ I  +E+       ++L +K  GK  E+I  D++RPKYF+P EA++Y
Sbjct: 220 P-IARFQGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEY 279

Query: 336 GLVDKIISSRDSAFEKRNYDDM 358
           G++DK++ +   + ++    D+
Sbjct: 280 GIIDKVVYNERGSQDRGVVSDL 299

The following BLAST results are available for this feature:

BLAST of CmoCh11G014160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ35	5.4e-140	72.22	ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic ...	[more]
Q8L770	5.5e-44	44.76	ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic ...	[more]
Q9L4P4	2.1e-43	45.00	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus el...	[more]
Q8LB10	2.7e-43	42.57	ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic ...	[more]
P74466	5.2e-42	45.23	Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp...	[more]

BLAST of CmoCh11G014160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EI06	1.2e-214	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JNF4	1.6e-211	98.16	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1D6K6	3.3e-177	83.73	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A5A7SMD0	1.2e-174	81.84	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BZX8	1.2e-174	81.84	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of CmoCh11G014160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49970.1	3.8e-141	72.22	CLP protease proteolytic subunit 1	[more]
AT1G09130.1	3.9e-45	44.76	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.2	3.9e-45	44.76	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT1G09130.3	3.9e-45	44.76	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[more]
AT4G17040.1	1.9e-44	42.57	CLP protease R subunit 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 320..339 score: 40.5 coord: 161..176 score: 40.62 coord: 241..258 score: 40.56 coord: 201..221 score: 35.24
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 161..341 e-value: 4.78139E-76 score: 230.791
None	No IPR available	GENE3D	3.90.226.10		coord: 150..349 e-value: 4.3E-54 score: 185.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..380
None	No IPR available	PANTHER	PTHR10381:SF55	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC	coord: 46..369
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 162..344 e-value: 1.8E-39 score: 135.5
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 46..369
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 155..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G014160.1	CmoCh11G014160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006364	rRNA processing
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004252	serine-type endopeptidase activity