CmoCh11G014120 (gene) Cucurbita moschata (Rifu) v1

Overview


Name	CmoCh11G014120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu) v1)
Description	leucine-rich repeat protein 2-like
Location	Cmo_Chr11: 9917564 .. 9920616 (+)
RNA-Seq Expression	CmoCh11G014120
Synteny	CmoCh11G014120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTGCGTTTTCTGTCCACCGGTTCCCCAAAGCCACAGCCCGGAAGGAAGAAACCTCTTATGAAAACGGTGGTGGACCCCAACCGGCGCCGGCCCCACCGCCACATTTCACGCGTCCAACCTGTCCCCTCATCAACCCACCAACCCAATTCACTAACTATGCCTTTTCTCTTCTCTTCTCTTCTCTTCACCTCTGTCAAAAAGTTTCTCTCTCTGATTTCTATATTTTCCCCTCTTTTCTCTTCTCTCCACTTGACCCATCCTTCTCTCTCAGTCAAATTCTTCCTCAATCCCACTGTTTTCTACTCATCTTTTCTTTTTCTTCGCTTTTACCTCCATTTCTCTTCTGGGGTTTGCTTCAATTTCTCTGTTTTCTTCTCCAATGGCTTCCCCCCCTCTCCCTCTTCTCTTTCTCCTTCTGGGTTTCTCTTTCTCGCCTGTAATTTCTACTAATTCGGAAGGTAACTGTGAATTCAATTGAATGCCCATGAGCTGTTTGATGTTTTGCCTATGATAATTTTATTTTCTTTTTGATTTCTAAAAGTTGGTTTTGAGTTTCTTGTTCATGTTTTTGGGTTGTTCGCCTGTAATTTCTACTAAATCTGTGAATGCAATTCAATGCCCATGAGCTGTTTGATGTTTTGCCTCTGATAACTTTTCTTGAAATTTTGTTTTCTTTTTTATTTCATGCTTTTGGGTTGTTCTTCTGGTTTTAGGAAATGCTTTGCATGCTCTGAGGAGAAGGCTGTCTGATCCCACCAATGTGCTGCAGAGTTGGGACCCTACTCTGGTTAATCCTTGCACTTGGTTTCATGTTACCTGTGATTCTGATAGCCATGTGATCCGCTTGTGAGATTCTACCCTTGTGTTTTTTTTCTCTCTGTTTTTATTTGGGTTCTTTATTCATGTTCTTTTCTCTCTGTGTTTTCAGGGATTTGGGAAATTCAAACATTTCTGGAACTTTGGGGCCTGAACTTGGCGAGCTCCGGCATCTTCAATATCTGTACTGCTCACCCTCTTCATCATTTTGAGAATTATTTAGATCTTTTTTTTATGTATTTGTGTTCTGCAGTGTGGATTATGAACATTTTTTAATTTCTTGAACACGATGGATTGCATAGTTAGAGCTGTAGGTTATGGGGTTGTTTTTCTGAGAATTTTTCATAGAAAAAAGTATGTTTTTTTGACAGTTTTTGTACTTATGGATTCACTTTAATTAATGTCTAAAAAGATCTCTCTTTTTTAACCACAAAGAATTTGTTCTTCCATTTGTTTCCTGGTCCACGAAGGAAATTAGGTTAACTAGCTTGAGAGTTTAGCTTCTTTATGCCAAGGTGATGGCTTAGCTATATTCAGTAAGCATTACTGACCTTTCTCGTGTTTTACGATGCCCTGTAGGGAGCTCTACAGGAATGGGATTACGGGCGAAATCCCTACAGAGCTCGGTAATTTAAAAAACCTTGTAAGCATGGATTTGTATGAGAACAAATTCGAAGGAAATATCCCGAAATCTTTTGCCAAACTCAAGTCGCTTAGATTTCTGTAAGCAACTTTCTATTGTCACTGAATAGTTTTGCTCCAATTGTATCTCATTTGGTTTGATTTGTATAAACAGACGGATGAACAACAACAAGTTGACAGGATCGATCCCGAGGGAACTCGCATCACTCTCTAAACTCAAAATTTTGTATGTTTGGTTTAGAAACAATTGCTTTGTTCTCTAGTCTCGCCCTCTCGCTCGCCCGTTATTCATTTTAGTAACGCTATCTTCAACTTTTTTCTGCAGTGATGTCTCAACCAATGAGCTCTGTGGAACAATTCCAGTTGATGGCCCATTTTCTACTTTCTCAATGGAAAGGTAAACAATTTCTTTAGATCTTTGTTCTCTCTGCTGGACACATTTCATGAAACCATATGTTAGAATGGTGAGTTCTTATCTGGCATACGTTCATAGAATTTCAATATGACTGAACAATCGTGGGTCGAAACGAAAGCAGTGACTCAAACTCGGTTACGCATTCTTGCTAAAACTATATGACACGCTTACAAAAGTACATTTAGACTAAAATGTACAGTTTTCAAAAAGAAAGTTTAAAGCTAATAAGTTCATCTTCATATACTTGATAAACAAGTATTGATGTATATTACTCCAAAAATTTATTATTTTTGTCTTAGAGTACTATTCATGGCAACTTATTTTGCTCAACGATTATTGGATGCTTTCGTTTGTTTAACTAGTATCCAACTCATGTCTATTGTGCCAACGCACAAGTAGTTGACAAATGTTCTACTAGTGATGGGCTGTTGGAGTATCTGAAATGTAACCGTCTAAGCTAACCGTTAGGTTAGCCGTTATTGTCCTCTTTGGGCTTTCCCTTCCGTGCTTCCCCTCAAGGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCCCCTCTTCAATCGATGTGGGATCTCACAATCGCTTTGGGGCCCAACAGTCTTGTTGGCACTCGTTCCTCTCTTCTATTGATGTGGGATCTCACATTCCACCCCACTCGGGGCCCAGCATTTTCGCTGGCACATCGCCCGGTGTCCATCCCCTTTTGGGGCTCAACGTTCTCACTGCGGTGTTTGGCTCTGATACTACTCTTGTTAAAAGTGTCCATATTTCATACATCATTAGTCGTTCTTCGCGATCATCTTGTGAAATGATTGGTTTTCGTTCTTGAGTGCCGCTCTAATATTTTTCTTGCTTGTCACCATGACCAATCCAACCTGGAATCCCAGAGTACATATTCAATTGAATTATTAACTGTACATGCTTTCTTTGCTGCAGTTATGAAAACAACAGGCTAAGTGGCCCCGAGTTGCAAGGACTTGTACCATATGACTTTGGATGCTGAACCTCCCGAGCTCGTCGTTAGTCTCAAAACAACGTGGCTTGGACGGTAATAGGTTCAATTGCATTGCGTGTGTTGAAAAATATAGGAACCACAATAAAGAATGTATTAGCTTCAATTCTCGGCGAGAACGAGAACGAGAACGAGAA

mRNA sequence

CCCTGCGTTTTCTGTCCACCGGTTCCCCAAAGCCACAGCCCGGAAGGAAGAAACCTCTTATGAAAACGGTGGTGGACCCCAACCGGCGCCGGCCCCACCGCCACATTTCACGCGTCCAACCTGTCCCCTCATCAACCCACCAACCCAATTCACTAACTATGCCTTTTCTCTTCTCTTCTCTTCTCTTCACCTCTGTCAAAAAGTTTCTCTCTCTGATTTCTATATTTTCCCCTCTTTTCTCTTCTCTCCACTTGACCCATCCTTCTCTCTCAGTCAAATTCTTCCTCAATCCCACTGTTTTCTACTCATCTTTTCTTTTTCTTCGCTTTTACCTCCATTTCTCTTCTGGGGTTTGCTTCAATTTCTCTGTTTTCTTCTCCAATGGCTTCCCCCCCTCTCCCTCTTCTCTTTCTCCTTCTGGGTTTCTCTTTCTCGCCTGTAATTTCTACTAATTCGGAAGGAAATGCTTTGCATGCTCTGAGGAGAAGGCTGTCTGATCCCACCAATGTGCTGCAGAGTTGGGACCCTACTCTGGTTAATCCTTGCACTTGGTTTCATGTTACCTGTGATTCTGATAGCCATGTGATCCGCTTGGATTTGGGAAATTCAAACATTTCTGGAACTTTGGGGCCTGAACTTGGCGAGCTCCGGCATCTTCAATATCTGGAGCTCTACAGGAATGGGATTACGGGCGAAATCCCTACAGAGCTCGGTAATTTAAAAAACCTTGTAAGCATGGATTTGTATGAGAACAAATTCGAAGGAAATATCCCGAAATCTTTTGCCAAACTCAAGTCGCTTAGATTTCTACGGATGAACAACAACAAGTTGACAGGATCGATCCCGAGGGAACTCGCATCACTCTCTAAACTCAAAATTTTTGATGTCTCAACCAATGAGCTCTGTGGAACAATTCCAGTTGATGGCCCATTTTCTACTTTCTCAATGGAAAGTTATGAAAACAACAGGCTAAGTGGCCCCGAGTTGCAAGGACTTGTACCATATGACTTTGGATGCTGAACCTCCCGAGCTCGTCGTTAGTCTCAAAACAACGTGGCTTGGACGGTAATAGGTTCAATTGCATTGCGTGTGTTGAAAAATATAGGAACCACAATAAAGAATGTATTAGCTTCAATTCTCGGCGAGAACGAGAACGAGAACGAGAA

Coding sequence (CDS)

ATGGCTTCCCCCCCTCTCCCTCTTCTCTTTCTCCTTCTGGGTTTCTCTTTCTCGCCTGTAATTTCTACTAATTCGGAAGGAAATGCTTTGCATGCTCTGAGGAGAAGGCTGTCTGATCCCACCAATGTGCTGCAGAGTTGGGACCCTACTCTGGTTAATCCTTGCACTTGGTTTCATGTTACCTGTGATTCTGATAGCCATGTGATCCGCTTGGATTTGGGAAATTCAAACATTTCTGGAACTTTGGGGCCTGAACTTGGCGAGCTCCGGCATCTTCAATATCTGGAGCTCTACAGGAATGGGATTACGGGCGAAATCCCTACAGAGCTCGGTAATTTAAAAAACCTTGTAAGCATGGATTTGTATGAGAACAAATTCGAAGGAAATATCCCGAAATCTTTTGCCAAACTCAAGTCGCTTAGATTTCTACGGATGAACAACAACAAGTTGACAGGATCGATCCCGAGGGAACTCGCATCACTCTCTAAACTCAAAATTTTTGATGTCTCAACCAATGAGCTCTGTGGAACAATTCCAGTTGATGGCCCATTTTCTACTTTCTCAATGGAAAGTTATGAAAACAACAGGCTAAGTGGCCCCGAGTTGCAAGGACTTGTACCATATGACTTTGGATGCTGA

Protein sequence

MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSMESYENNRLSGPELQGLVPYDFGC

Homology

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BLAST of CmoCh11G014120 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.7e-74
Identity = 133/203 (65.52%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 11  LLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIR 70
           L+L  +   +   NSEG+ALHALRR LSDP NV+QSWDPTLVNPCTWFHVTC+    V R
Sbjct: 15  LILTLALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTR 74

Query: 71  LDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNI 130
           LDLGNSN+SG L PELG+L HLQYLELY+N I G IP+ELGNLK+L+S+DLY N   G I
Sbjct: 75  LDLGNSNLSGHLVPELGKLEHLQYLELYKNEIQGTIPSELGNLKSLISLDLYNNNLTGKI 134

Query: 131 PKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSME 190
           P S  KLKSL FLR+N N+LTG IPREL  +S LK+ DVS N+LCGTIPV+GPF    M+
Sbjct: 135 PSSLGKLKSLVFLRLNENRLTGPIPRELTVISSLKVVDVSGNDLCGTIPVEGPFEHIPMQ 194

Query: 191 SYENN-RLSGPELQGLVPYDFGC 213
           ++ENN RL GPEL GL  YD  C
Sbjct: 195 NFENNLRLEGPELLGLASYDTNC 217

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BLAST of CmoCh11G014120 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-73
Identity = 127/203 (62.56%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 11  LLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIR 70
           L L  +   ++  NSEG+AL+ALRR L+DP +VLQSWDPTLVNPCTWFHVTC+ D+ V R
Sbjct: 15  LTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTWFHVTCNQDNRVTR 74

Query: 71  LDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNI 130
           +DLGNSN+SG L PELG+L HLQYLELY+N I G IP+ELGNLKNL+S+DLY N   G +
Sbjct: 75  VDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKNLISLDLYNNNLTGIV 134

Query: 131 PKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSME 190
           P S  KLKSL FLR+N+N+LTG IPR L ++  LK+ DVS+N+LCGTIP +GPF+   ++
Sbjct: 135 PTSLGKLKSLVFLRLNDNRLTGPIPRALTAIPSLKVVDVSSNDLCGTIPTNGPFAHIPLQ 194

Query: 191 SYENN-RLSGPELQGLVPYDFGC 213
           ++ENN RL GPEL GL  YD  C
Sbjct: 195 NFENNPRLEGPELLGLASYDTNC 217

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BLAST of CmoCh11G014120 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-72
Identity = 128/190 (67.37%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 24  NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIRLDLGNSNISGTLG 83
           NSEG+AL ALRR L DP  VLQSWDPTLVNPCTWFHVTCD D+ V RLDLGN N+SG L 
Sbjct: 24  NSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTWFHVTCDRDNRVTRLDLGNLNLSGHLV 83

Query: 84  PELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNIPKSFAKLKSLRFL 143
           PELG+L HLQYLELY+N I G IP+ELGNLKNL+S+DLY+N   G IP +  KL SL FL
Sbjct: 84  PELGKLDHLQYLELYKNNIQGTIPSELGNLKNLISLDLYKNNISGTIPPTLGKLTSLVFL 143

Query: 144 RMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSMESYENN-RLSGPEL 203
           R+N N+LTG IPRELA +S LK+ DVS+N+LCGTIP  GPF    + ++E N RL GPEL
Sbjct: 144 RLNGNRLTGPIPRELAGISSLKVVDVSSNDLCGTIPTSGPFEHIPLSNFEKNPRLEGPEL 203

Query: 204 QGLVPYDFGC 213
           QGL  YD  C
Sbjct: 204 QGLAVYDTNC 213

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BLAST of CmoCh11G014120 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-72
Identity = 128/190 (67.37%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 24  NSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIRLDLGNSNISGTLG 83
           NSEG+AL ALRR L DP  VLQSWDPTLVNPCTWFHVTCD D+ V RLDLGN N+SG L 
Sbjct: 24  NSEGDALSALRRSLRDPGGVLQSWDPTLVNPCTWFHVTCDRDNRVTRLDLGNLNLSGHLV 83

Query: 84  PELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNIPKSFAKLKSLRFL 143
           PELG+L HLQYLELY+N I G IP+ELGNLKNL+S+DLY+N   G IP +  KL SL FL
Sbjct: 84  PELGKLDHLQYLELYKNNIQGTIPSELGNLKNLISLDLYKNNISGTIPPTLGKLTSLVFL 143

Query: 144 RMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSMESYENN-RLSGPEL 203
           R+N N+LTG IPRELA +S LK+ DVS+N+LCGTIP  GPF    + ++E N RL GPEL
Sbjct: 144 RLNGNRLTGPIPRELAGISSLKVVDVSSNDLCGTIPTSGPFEHIPLSNFEKNPRLEGPEL 203

Query: 204 QGLVPYDFGC 213
           QGL  YD  C
Sbjct: 204 QGLAVYDTNC 213

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BLAST of CmoCh11G014120 vs. ExPASy Swiss-Prot
Match: Q9XIC7 (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-61
Identity = 114/194 (58.76%), Postives = 147/194 (75.77%), Query Frame = 0


Query: 8   LLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSH 67
           L+ LLL F+   + S+N EG+ALH+LR  L DP NVLQSWDPTLVNPCTWFHVTC++++ 
Sbjct: 14  LISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENS 73

Query: 68  VIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFE 127
           VIR+DLGN+++SG L P+LG+L++LQYLELY N ITG +P++LGNL NLVS+DLY N F 
Sbjct: 74  VIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFT 133

Query: 128 GNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTF 187
           G IP S  KL  LRFLR+NNN LTG IP  L ++  L++ D+S N L G++P +G FS F
Sbjct: 134 GPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLF 193

Query: 188 SMESYENN-RLSGP 201
           +  S+ NN  L GP
Sbjct: 194 TPISFANNLDLCGP 207

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BLAST of CmoCh11G014120 vs. ExPASy TrEMBL
Match: A0A6J1EJ92 (leucine-rich repeat protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111434648 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.4e-119
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60
           MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV
Sbjct: 1   MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60

Query: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD 120
           TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD
Sbjct: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD 120

Query: 121 LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV 180
           LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV
Sbjct: 121 LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV 180

Query: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 213
           DGPFSTFSMESYENNRLSGPELQGLVPYDFGC
Sbjct: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 212

[Close]

BLAST of CmoCh11G014120 vs. ExPASy TrEMBL
Match: A0A6J1JEF1 (leucine-rich repeat protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486151 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 7.7e-115
Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0


Query: 1   MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60
           MAS PLPLLFLLLG SFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV
Sbjct: 1   MASLPLPLLFLLLGISFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60

Query: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD 120
           TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGI GEIPTELGNLKNLVSMD
Sbjct: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGIMGEIPTELGNLKNLVSMD 120

Query: 121 LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV 180
           LYENKFEG IPKSFAKL+SLRFL+MNNNKLTGSIPRELASLSKLKIFDVS NELCGTIPV
Sbjct: 121 LYENKFEGKIPKSFAKLESLRFLQMNNNKLTGSIPRELASLSKLKIFDVSNNELCGTIPV 180

Query: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 213
           DGPFSTFSMESYENNRLSGPELQGLVPYDFGC
Sbjct: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 212

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BLAST of CmoCh11G014120 vs. ExPASy TrEMBL
Match: A0A6J1D3U1 (leucine-rich repeat protein 2-like OS=Momordica charantia OX=3673 GN=LOC111017346 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 9.7e-110
Identity = 195/212 (91.98%), Postives = 203/212 (95.75%), Query Frame = 0


Query: 1   MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60
           MAS PL L FLLLG SFSP ISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV
Sbjct: 1   MASLPLLLRFLLLGLSFSPAISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60

Query: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD 120
           TC+SDSHVIRLDLGNSNISGTLGPELGEL+HLQYLELYRNGI+G+IP+ELGNLKNLVSMD
Sbjct: 61  TCNSDSHVIRLDLGNSNISGTLGPELGELQHLQYLELYRNGISGKIPSELGNLKNLVSMD 120

Query: 121 LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV 180
           LYENKFEG IPKSFAKLKSLRFLR+NNNKLTGSIPREL SLSKLKIFDVS N++CGTIPV
Sbjct: 121 LYENKFEGKIPKSFAKLKSLRFLRLNNNKLTGSIPRELTSLSKLKIFDVSNNDICGTIPV 180

Query: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 213
           DGPFSTF MESYENNRLSGPELQGLVPYDFGC
Sbjct: 181 DGPFSTFPMESYENNRLSGPELQGLVPYDFGC 212

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BLAST of CmoCh11G014120 vs. ExPASy TrEMBL
Match: A0A0A0K4G9 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071480 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.7e-109
Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 1   MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60
           MAS PL LLFLLLG S SPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV
Sbjct: 1   MASFPLFLLFLLLGLSLSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60

Query: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD 120
           TCDSD+HVIRLDLGNSNISGTLGPE+G+L+HLQYLELYRNG++G+IPTELGNLKNLVSMD
Sbjct: 61  TCDSDNHVIRLDLGNSNISGTLGPEIGDLQHLQYLELYRNGLSGKIPTELGNLKNLVSMD 120

Query: 121 LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV 180
           LYENKFEG IPKSFAKL+SLRFLRMNNNKLTGSIPRELASLSKLKIFDVS N+LCGTIPV
Sbjct: 121 LYENKFEGKIPKSFAKLESLRFLRMNNNKLTGSIPRELASLSKLKIFDVSNNDLCGTIPV 180

Query: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 213
           DGPF+TFSMESY NN+LSGPELQGLVPYDFGC
Sbjct: 181 DGPFATFSMESYVNNKLSGPELQGLVPYDFGC 212

[Close]

BLAST of CmoCh11G014120 vs. ExPASy TrEMBL
Match: A0A1S3BZX3 (somatic embryogenesis receptor kinase 1-like OS=Cucumis melo OX=3656 GN=LOC103495297 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 193/212 (91.04%), Postives = 204/212 (96.23%), Query Frame = 0


Query: 1   MASPPLPLLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60
           MAS PL LLFLLLG S SPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV
Sbjct: 1   MASFPLFLLFLLLGLSLSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHV 60

Query: 61  TCDSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMD 120
           TCDSD+HVIRLDLGNSNISGTLGPE+G+L++LQYLELYRNG++G+IPTELGNLKNLVSMD
Sbjct: 61  TCDSDNHVIRLDLGNSNISGTLGPEIGDLQYLQYLELYRNGLSGKIPTELGNLKNLVSMD 120

Query: 121 LYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPV 180
           LYENKFEG IPKSFAKL+SLRFLRMNNNKLTGSIPREL SLSKLKIFDVS N+LCGTIPV
Sbjct: 121 LYENKFEGKIPKSFAKLESLRFLRMNNNKLTGSIPRELTSLSKLKIFDVSNNDLCGTIPV 180

Query: 181 DGPFSTFSMESYENNRLSGPELQGLVPYDFGC 213
           DGPF+TFSMESY NNRLSGPELQGLVPYDFGC
Sbjct: 181 DGPFATFSMESYINNRLSGPELQGLVPYDFGC 212

[Close]

BLAST of CmoCh11G014120 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.2e-75
Identity = 133/203 (65.52%), Postives = 155/203 (76.35%), Query Frame = 0


Query: 11  LLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIR 70
           L+L  +   +   NSEG+ALHALRR LSDP NV+QSWDPTLVNPCTWFHVTC+    V R
Sbjct: 15  LILTLALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTR 74

Query: 71  LDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNI 130
           LDLGNSN+SG L PELG+L HLQYLELY+N I G IP+ELGNLK+L+S+DLY N   G I
Sbjct: 75  LDLGNSNLSGHLVPELGKLEHLQYLELYKNEIQGTIPSELGNLKSLISLDLYNNNLTGKI 134

Query: 131 PKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSME 190
           P S  KLKSL FLR+N N+LTG IPREL  +S LK+ DVS N+LCGTIPV+GPF    M+
Sbjct: 135 PSSLGKLKSLVFLRLNENRLTGPIPRELTVISSLKVVDVSGNDLCGTIPVEGPFEHIPMQ 194

Query: 191 SYENN-RLSGPELQGLVPYDFGC 213
           ++ENN RL GPEL GL  YD  C
Sbjct: 195 NFENNLRLEGPELLGLASYDTNC 217

[Close]

BLAST of CmoCh11G014120 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 276.6 bits (706), Expect = 1.7e-74
Identity = 127/203 (62.56%), Postives = 158/203 (77.83%), Query Frame = 0


Query: 11  LLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIR 70
           L L  +   ++  NSEG+AL+ALRR L+DP +VLQSWDPTLVNPCTWFHVTC+ D+ V R
Sbjct: 15  LTLTLALIHLVEANSEGDALYALRRSLTDPDHVLQSWDPTLVNPCTWFHVTCNQDNRVTR 74

Query: 71  LDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFEGNI 130
           +DLGNSN+SG L PELG+L HLQYLELY+N I G IP+ELGNLKNL+S+DLY N   G +
Sbjct: 75  VDLGNSNLSGHLAPELGKLEHLQYLELYKNNIQGTIPSELGNLKNLISLDLYNNNLTGIV 134

Query: 131 PKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTFSME 190
           P S  KLKSL FLR+N+N+LTG IPR L ++  LK+ DVS+N+LCGTIP +GPF+   ++
Sbjct: 135 PTSLGKLKSLVFLRLNDNRLTGPIPRALTAIPSLKVVDVSSNDLCGTIPTNGPFAHIPLQ 194

Query: 191 SYENN-RLSGPELQGLVPYDFGC 213
           ++ENN RL GPEL GL  YD  C
Sbjct: 195 NFENNPRLEGPELLGLASYDTNC 217

[Close]

BLAST of CmoCh11G014120 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 264.6 bits (675), Expect = 6.7e-71
Identity = 133/233 (57.08%), Postives = 155/233 (66.52%), Query Frame = 0


Query: 11  LLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSHVIR 70
           L+L  +   +   NSEG+ALHALRR LSDP NV+QSWDPTLVNPCTWFHVTC+    V R
Sbjct: 15  LILTLALIRLTEANSEGDALHALRRSLSDPDNVVQSWDPTLVNPCTWFHVTCNQHHQVTR 74

Query: 71  LDLGNSNISGTLGPELGELRHLQYL------------------------------ELYRN 130
           LDLGNSN+SG L PELG+L HLQYL                              ELY+N
Sbjct: 75  LDLGNSNLSGHLVPELGKLEHLQYLYGIITLLPFDYLKTFTLSVTHITFCFESYSELYKN 134

Query: 131 GITGEIPTELGNLKNLVSMDLYENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELAS 190
            I G IP+ELGNLK+L+S+DLY N   G IP S  KLKSL FLR+N N+LTG IPREL  
Sbjct: 135 EIQGTIPSELGNLKSLISLDLYNNNLTGKIPSSLGKLKSLVFLRLNENRLTGPIPRELTV 194

Query: 191 LSKLKIFDVSTNELCGTIPVDGPFSTFSMESYENN-RLSGPELQGLVPYDFGC 213
           +S LK+ DVS N+LCGTIPV+GPF    M+++ENN RL GPEL GL  YD  C
Sbjct: 195 ISSLKVVDVSGNDLCGTIPVEGPFEHIPMQNFENNLRLEGPELLGLASYDTNC 247

[Close]

BLAST of CmoCh11G014120 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 )

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 114/194 (58.76%), Postives = 147/194 (75.77%), Query Frame = 0


Query: 8   LLFLLLGFSFSPVISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTCDSDSH 67
           L+ LLL F+   + S+N EG+ALH+LR  L DP NVLQSWDPTLVNPCTWFHVTC++++ 
Sbjct: 14  LISLLLLFNSLWLASSNMEGDALHSLRANLVDPNNVLQSWDPTLVNPCTWFHVTCNNENS 73

Query: 68  VIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLYENKFE 127
           VIR+DLGN+++SG L P+LG+L++LQYLELY N ITG +P++LGNL NLVS+DLY N F 
Sbjct: 74  VIRVDLGNADLSGQLVPQLGQLKNLQYLELYSNNITGPVPSDLGNLTNLVSLDLYLNSFT 133

Query: 128 GNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDGPFSTF 187
           G IP S  KL  LRFLR+NNN LTG IP  L ++  L++ D+S N L G++P +G FS F
Sbjct: 134 GPIPDSLGKLFKLRFLRLNNNSLTGPIPMSLTNIMTLQVLDLSNNRLSGSVPDNGSFSLF 193

Query: 188 SMESYENN-RLSGP 201
           +  S+ NN  L GP
Sbjct: 194 TPISFANNLDLCGP 207

[Close]

BLAST of CmoCh11G014120 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 )

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62
Identity = 116/199 (58.29%), Postives = 145/199 (72.86%), Query Frame = 0


Query: 8   LLFLLLGFSFSP-----VISTNSEGNALHALRRRLSDPTNVLQSWDPTLVNPCTWFHVTC 67
           ++F+LL     P     + S N EG+ALH LR  L DP NVLQSWDPTLVNPCTWFHVTC
Sbjct: 6   VVFILLSLILLPNHSLWLASANLEGDALHTLRVTLVDPNNVLQSWDPTLVNPCTWFHVTC 65

Query: 68  DSDSHVIRLDLGNSNISGTLGPELGELRHLQYLELYRNGITGEIPTELGNLKNLVSMDLY 127
           ++++ VIR+DLGN+ +SG L PELG L++LQYLELY N ITG IP+ LGNL NLVS+DLY
Sbjct: 66  NNENSVIRVDLGNAELSGHLVPELGVLKNLQYLELYSNNITGPIPSNLGNLTNLVSLDLY 125

Query: 128 ENKFEGNIPKSFAKLKSLRFLRMNNNKLTGSIPRELASLSKLKIFDVSTNELCGTIPVDG 187
            N F G IP+S  KL  LRFLR+NNN LTGSIP  L +++ L++ D+S N L G++P +G
Sbjct: 126 LNSFSGPIPESLGKLSKLRFLRLNNNSLTGSIPMSLTNITTLQVLDLSNNRLSGSVPDNG 185

Query: 188 PFSTFSMESYENN-RLSGP 201
            FS F+  S+ NN  L GP
Sbjct: 186 SFSLFTPISFANNLDLCGP 204

The following BLAST results are available for this feature:

BLAST of CmoCh11G014120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQP4	1.7e-74	65.52	Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1	[more]
Q9FPJ5	2.4e-73	62.56	Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1	[more]
B8ABC2	3.5e-72	67.37	Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=...	[more]
Q5VQP7	3.5e-72	67.37	Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 P...	[more]
Q9XIC7	1.6e-61	58.76	Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2...	[more]

BLAST of CmoCh11G014120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EJ92	1.4e-119	100.00	leucine-rich repeat protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111434648...	[more]
A0A6J1JEF1	7.7e-115	96.70	leucine-rich repeat protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486151 P...	[more]
A0A6J1D3U1	9.7e-110	91.98	leucine-rich repeat protein 2-like OS=Momordica charantia OX=3673 GN=LOC11101734...	[more]
A0A0A0K4G9	1.7e-109	91.51	LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G071480 PE=...	[more]
A0A1S3BZX3	1.4e-108	91.04	somatic embryogenesis receptor kinase 1-like OS=Cucumis melo OX=3656 GN=LOC10349...	[more]

BLAST of CmoCh11G014120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43740.1	1.2e-75	65.52	Leucine-rich repeat (LRR) family protein	[more]
AT5G21090.1	1.7e-74	62.56	Leucine-rich repeat (LRR) family protein	[more]
AT3G43740.2	6.7e-71	57.08	Leucine-rich repeat (LRR) family protein	[more]
AT1G34210.1	1.2e-62	58.76	somatic embryogenesis receptor-like kinase 2	[more]
AT1G71830.1	2.6e-62	58.29	somatic embryogenesis receptor-like kinase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata (Rifu) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 22..205 e-value: 1.2E-58 score: 199.6
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 90..150 e-value: 4.6E-8 score: 32.7
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 24..63 e-value: 1.1E-9 score: 38.4
None	No IPR available	PANTHER	PTHR48054	RECEPTOR KINASE-LIKE PROTEIN XA21	coord: 9..209
None	No IPR available	PANTHER	PTHR48054:SF3	LRR AMINO-TERMINAL DOMAIN PROTEIN	coord: 9..209
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 24..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G014120.1	CmoCh11G014120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding